dse_625

CDS [Dsec\GM20639-cds]; exon [dsec_GLEANR_3453:1]; exon [dsec_GLEANR_3453:2]; CDS [Dsec\GM20639-cds]; intron [Dsec\GM20639-in]

-----------#######################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TTCCCGAGGAGATGGGCCTGCTGCTACTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATAATCTATGGGTCCGCAAAGATCCCACAAAAAGATGAGGTCTTTAGACAACTTTAAATCAAACTTTTGCGTGTTTGAAATATGTTTCATTTGGATGCGTGTCAGTTTGTATATAGTTTGTGGATACTTTAAACTTCAATTGTGGTTTTAGTACGAGACTAAAGTGAATTAGAAGACCTAGACTTTGATAACAATAATATTGAAAGTGAATTTGCTACTTATAATTGATTACTATGTTTGCAATATATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGACCAAGACGTTTGTGAA ************************************************(((((((..(((.((((((.........((((((......)).))))...((((...((((((((.((..((((.....((((((..((((((((((((..........))))))))))))..))))))....((((((.....((((..(((((........))))).))))..))))))))))...)).))))))))...)))).....((((...)))).(((((.......))))).))))))..)))..)))))))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V114 embryo	V115 head	M054 female body	V113 male body
.........................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGACCAAGACGTTTGT...	25	0	1	1.00	1	1	0	0	0
......................................................................................................................................................................GCGTGTCAGTTTGTATATAG...........................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................ACATTGACCTGGAGACCAAG...........	20	0	1	1.00	1	1	0	0	0
..CCCGAGGAGATGGGCCTGCTG..............................................................................................................................................................................................................................................................................................................................................................	21	0	1	1.00	1	0	1	0	0
......................GCTACTGGTGCTGATAGCGGG..........................................................................................................................................................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0
...........................................CATTGGCGTAAGCACTGTACCG....................................................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	0	0	0	1
.TCCCGAGGCGATGGGCCTG.................................................................................................................................................................................................................................................................................................................................................................	19	1	1	1.00	1	0	0	1	0
TTCCCGAGGAGATGGGCCTG.................................................................................................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	1	0
.........................ACTGGTGCTAATACCGCGCA........................................................................................................................................................................................................................................................................................................................................	20	3	4	0.25	1	0	0	0	1
............................................................................................TCCAACAAAAAGAAGAGCTCT....................................................................................................................................................................................................................................................................	21	3	7	0.14	1	0	1	0	0

AAGGGCTCCTCTACCCGGACGACGATGACCACGACTATCGCCCGTAACCGCATTCGTGACATGGCTAATTTATTAGATACCCAGGCGTTTCTAGGGTGTTTTTCTACTCCAGAAATCTGTTGAAATTTAGTTTGAAAACGCACAAACTTTATACAAAGTAAACCTACGCACAGTCAAACATATATCAAACACCTATGAAATTTGAAGTTAACACCAAAATCATGCTCTGATTTCACTTAATCTTCTGGATCTGAAACTATTGTTATTATAACTTTCACTTAAACGATGAATATTAACTAATGATACAAACGTTATATAAAATCACGCGTTGACGTCGTCGGTTGTAACTGGACCTCTGGTTCTGCAAACACTT ************************************************(((((((..(((.((((((.........((((((......)).))))...((((...((((((((.((..((((.....((((((..((((((((((((..........))))))))))))..))))))....((((((.....((((..(((((........))))).))))..))))))))))...)).))))))))...)))).....((((...)))).(((((.......))))).))))))..)))..)))))))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M054 female body
...........................................................................................................................................................................................................................................................................................................................................ACGGCATCGGTTGTCACTGGAC....................	22	3	1	1.00	1	1
..................................................................................................................................................................................................................................................TTCTGGATCTGAAACTATTGT..............................................................................................................	21	0	1	1.00	1	1
.......................................................................................................................................................................................................................................................................................................................................GTTGAAATAGTCGGTTGTAA..........................	20	3	14	0.07	1	1

Species	Coordinate	ID	Alignment
droSec2	scaffold_1:2567877-2568249 -	dse_625	TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGAGGT-CTTTAGACA-------ACTTTA---AATCAAA---CTTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATGCGTGTC-----AGTTTG--TATATAGTTTGTGGATACTTTAAACTTCAATTGTGGTTTTAGTACGAGACTAAAGTGAATTAGAAGACCTAGA-----------CTTTGATAACAATAATA---TTGAAAGTGAATTTGCTACTTATAATTGATT---------------------------------------------------------------------------------------AC--------------TATGT-TTGCAA----TATATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGACCAAGACGTTTGTGAA
droSim2	2r:5738829-5739215 -	dsi_26841	TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGAGGT-CTTTAGACA-------ACTTTA---AATCATAAAACTTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATGCGTGTC-----AGTTTG--TATATAGTTTGTGGATACTTTAAACTTCAATTGTGGTTTTAGTACGAGACTAAAGAGACTTAGAAGACTCAGACTATACGAAGTCTTTGATAACAAAAATA---TTGAAAGTGAATTTGGTACTTATAATTGATT---------------------------------------------------------------------------------------AC--------------TATGT-TTGCAA----TACATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA
dm3	chr2R:4929267-4929603 -		TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG------CTGCTTCTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCAC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGTGGT-CTTTAGATA-------ACTTTA---AATCATA---ATTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TAGATGCGTGTC-----AGTTTC--TATATAGTTTGAGGATACT-----------------------------------------TAGAAGACCTAGACTAAACTAAGCCTGTAATAGCAATAATA---TTGTAAGTGAATTTGCTGCTTTTAATTGA---------------------------------------------------------------------------------------------------------------TTGTCA----TTTATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA
droEre2	scaffold_4929:17720065-17720417 +		TTCTG-------------------------------------------GAGGAGATGGGCCT---------GCTG---------ATACTGGTGCTGATAGTGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTGAGGTTTCGC--AAAGATC-----------------------------------------------------CCACA--AAAATATGAGGT-TTT--GATA-----CCATTCACCAAAATCATA----TTTTGCGTGTTTCA-AAT------AAGTCTTACT--------TGAAT---------------TAA--TATATAATCAGTGGATACTTTTAACATCGATTGTGGTTCTAGTACGAGACTAAGGAGACTTAG---------G-----------------------------------------------TTCATATAATTGCTAAAT----------------------------------------------------------TATAAAAAATATAAATTAATTAAAATATAAT-------------TGC-TTGCTA----TATGTTTTAGTACGCAACTGCAGCAGCCAACATTGACCTGGAGGCAAAGACGTTTGTGAA
droYak3	2L:17590313-17590648 -		TTCCA-------------------------------------------GAGAAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCAGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCATTGGTTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATTAGGT-CTTAAAAAA-------ACTCTA---AATGATG---ATTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATTCATT----------ATATACATATAATAAGTGGATA-------------TTGTGGTCCTAGTATGAGACTAAGGAGACTTAGGAGACTTA------ATAAAGTCTTTGATAACAACCATA---TTGAAAGTGAACTTGC--------------------------------------------------------------------------------------------------------------------------------TA----TATATTTTAGTACGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA
droEug1	scf7180000409183:581574-581747 -		TTCCA-------------------------------------------GGGGAGATGAGCCT---------GCTGCTG---CTGCTGGTGCTGCTGATAGCCGGCATTGCCGTAAGCATTATAGCGATTAAATA----------------------------------------------------------ATAATCTTTGATTCAACCATGAGATC-----------------------------------------------------TTAAC--AAAA----TAGC-TCGAAACAC-------AAATTA---ACTCATC---TTATTGCGTATCAAGAAAT------GTGTTTCATT--------TTGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1	scf7180000301506:1810485-1810602 +		TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG------------CTGCTGCTGATAGCAGGCGTTGCCGTAAGCATTG---CGATTAAGTA-------------------------------------------------------------ATCTCT------GC--CGAGATC-----------------------------------------------------CCACC--GAAA-ATGTAGT-TTGAAACCA-------AGTTTA---ACTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1	scf7180000415436:71067-71257 +		TTCCA-------------------------------------------GAGGAGATGGGCCT---------GCTG------------CTGCTGCTGATAGCGGGCATTGGCGTAAGCATTGTAGCGATTAAGTA-------------------------------------------------------------ATCATTGAT--------GAGTTT-----------------------------------------------------ACACT--AAG-GAATTGGT-TAAAAATAG-------ACTTTA---ACTCGTC---GTATTGCGTTTTAAG-AATTGGCTAATGTTTTATT--------AAGATTCGAGTCTCTCGAGCTTC--TATTTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droEle1	scf7180000491240:615293-615454 +		TTCCA-------------------------------------------GAGGAGATGAGCCT---------GCCG------CTGCTCCTACTACTGATAGTGGGCATTGCCGTAAGCATGGTTGCGATTAAATA-------------------------------------------------------------ATCTTTGATTCCGTGCTAAGATC-----------------------------------------------------TCTCAGAAAA-CAT-TGATTTTAAAATAC-------ATTCCA---ACGCATC---TTATTGCGTAGCTGA-AAA------AAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000773652:19552-19713 -		ATTTT-------------------------------------------GAT-----------------------------------------------ATTTTTTTTTGGTTTGAACTCTAT-----------A-------------------------------------------------------------ATAACTTGCTTAAG--AAAAAGC-----------------------------------------------------TTTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGATTCGA---TTCGATG---ATAATTC----------TAAT---------------------------------------------------------------------------------------AC--------------AATGTTTTTTCT----TTAACTTAAGTGCGCAAATGCGGCTGCCAACTTTGACCTCGAGGCCAAGACGTTTGTGAA
droFic1	scf7180000453851:1355976-1356091 +		TTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGATCCGA---CGAAGCGTGGACCTTCC----TTAATTGG-T---------------------------------------------------------------------------------------TT--------------AATGGCTTTTCC----CGAATTGTAGTGCGCAAATGCAGCTGCCAACGCTGACCTGGAGGCCAGGACGTTTGCGAA
droKik1	scf7180000302476:2479919-2480355 +		TTCCT-------------------------------------------AAGAAGATGAGCCT---------GCTG------CTGCCGCTGCTGCTGATAGCAGGCATTGGCGTAAGCATTTTAGAGTTTATATTATAGAGATTATTTAATAACAAAAAGAGATTATTTTATAATAATAGAGATTATTTAGTAACAATATTTGATGTCAGTTTGAGATA-----------------------------------------------------TTATACAAAA-AATGTA-TTTTAAAAGTTTCTTAA-AGTCAT---CATCATC---TTATTGCGTATTTTG-TTT------GCGTCT----------------------------------------TTCGTTTTCTAATAATACAAATCTTAATT-TGCTTTTAAATAAAGTTTTAAGTAGAT---------TATTTCATATGCAATCTTTTCCTTTATACATTTGTCTAAAAATGAACCTTGT------------------------------------------TTCAACCCAAA--------------------TATCATCTTAA--ATGTTTATTAATAC--------------------------CTC----CTTATCTCAGTGCACCTCTGCGGCTGCCAATCTTGACCTGGAGGCCAAGACGTTTGTGAA
droAna3	scaffold_13266:3566006-3566315 +		TTCCG-------------------------------------------GCGGAGATGAGTCT---------ACGGAGTATGGTGCTCCTGCTGCTGATAGCTGGAATTGGCGTAAGCATTTTGTGGATTAAATA-------------------------------------------------------------ATCAGTGATTTTAC--TATAAACTTAATGTTGTGGTGGGCCTGCCAGAAGAAAATTAATGACATGATTAATTTTAGCTCCA--AAAATATTATAA-CTTAAGATT-------ATAATA---TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCAAAT----------------------------------------------------------TATTATTAG--AAAATCAACAAGATTGTAATTGATATTTTTGGATGGG-----ATATTCCCATTTCAGTGCGCCTCGGCGGCAGTTAATTATGACCTCGAGGCCAAGACTTTTGTGAA
droBip1	scf7180000396427:2032485-2032926 +		TTCCAGATTACGGATTACGAGTTCCAGATTCCG---------------GCGGAGATGAGTCT---------ACGGAGCGTGGTGCTTCTGCTGCTGATAGCTGGCATTGGCGTAAGCGTTTTATGGATTAAATA-------------------------------------------------------------ATCTAAGATTCCAC--CATAAAATTAAAGATTTGATGGATCCATATGTTTAAAATAAATGATGTTGTTAATTTTAGTTCCA--AAAATA--------------------------------------------------------------GTCTAAAATATTAATTTTATAACAAATATTGAATCT------------------------------------------TTTTGGAACTAAAATTGGGTTAAGGTCACA----------------------------------ATACA------------------------------TTTTCAAAAACCATAAAAACAACAAGAAATAACTTACAACTTAAACAGATCTACATTTAATGGAAGATAATTTTGA--AAAATTAATAAGATCTC-ATTGATGTTTTTGGATGGGT------ATTCCCATTTCAGTGCGCCTCGGCAGCAGCTAATTATGACCTCGAGGCCAAGACTTTTGTGAA
dp5	3:9644234-9644339 -		TTCCA-------------------------CCT---------------CCGGAGATGATTCT---------CCAGTGT---CTATCCCTGCTGCTGATAGCAGCCATAGGCGTAAGTGA------------------------------------------------------------------------------------GCCACC--AAACATC-----------------------------------------------------TCACA--AAGTG----------------------------------------------------------------GCTAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-TT----------------------------------------------------C--------------C
droPer2	scaffold_4:4969029-4969115 -		TTCCA-------------------------CCT---------------CCGGAGATGATTCT---------CCAGTGT---CTATCCCTGCTGCTGATAGCAGCCATAGGCGTAAGTGA------------------------------------------------------------------------------------GCCACC--AAACATC-----------------------------------------------------TCACA--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droWil2	scf2_1100000004822:2310977-2311019 -		CTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTCAATTATGAACTTCAGGCCAGGACTTTTATCAA
droVir3	scaffold_12875:10641-10750 +		TTTCA-------------------------ACTAAAGTTCTTCAAGGCGAAAAGATGCGCTACGCGTGTCAAGCT------CAGCTGCTGCTGCTGATAGCAGCCATTGGCGTAAGCATAATTC------------------------------------------------------------------------------------A--AAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTAAATAAT
droMoj3	scaffold_6496:5497496-5497558 -		ACCTT-------------------------------------------AGTGGACAACGGCT---------GCC--GT---CAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTACGATCGGCAGGCCAAGACGTTCGTGGA
droGri2	scaffold_15245:10933572-10933610 -		TG-------------------------------------------------------------------------------CTGCTGCTACTGCTGATAGCAGCTGTTGGCGTAAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGAGGT-CTTTAGACA-------ACTTTA---AATCAAA---CTTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATGCGTGTC-----AGTTTG--TATATAGTTTGTGGATACTTTAAACTTCAATTGTGGTTTTAGTACGAGACTAAAGTGAATTAGAAGACCTAGA-----------CTTTGATAACAATAATA---TTGAAAGTGAATTTGCTACTTATAATTGATT---------------------------------------------------------------------------------------AC--------------TATGT-TTGCAA----TATATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGACCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGACCAAGACGTTTGT...	25	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................GCGTGTC-----AGTTTG--TATATAG...................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACCTGGAGACCAAG...........	20	1	1.00	1	0	0	1	0
..CCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
..........................................................................G---------CTACTGGTGCTGATAGCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
........................................................................................................CATTGGCGTAAGCACTGTACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
TTCCC-------------------------------------------GAGGAGATGGGCCT---------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0

droSim2

TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGAGGT-CTTTAGACA-------ACTTTA---AATCATAAAACTTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATGCGTGTC-----AGTTTG--TATATAGTTTGTGGATACTTTAAACTTCAATTGTGGTTTTAGTACGAGACTAAAGAGACTTAGAAGACTCAGACTATACGAAGTCTTTGATAACAAAAATA---TTGAAAGTGAATTTGGTACTTATAATTGATT---------------------------------------------------------------------------------------AC--------------TATGT-TTGCAA----TACATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..CCC-------------------------------------------GAGGAGATGGGCCT---------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................GCATTGGCGTAAGCACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CCC-------------------------------------------GAGGAGATGGGCCT---------GCTG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TTCCC-------------------------------------------GAGGAGATGGGCCT---------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG------CTGCTTCTGGTGCTGATAGCGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTATGGGTCCAC--AAAGATC-----------------------------------------------------CCACA--AAAAGATGTGGT-CTTTAGATA-------ACTTTA---AATCATA---ATTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TAGATGCGTGTC-----AGTTTC--TATATAGTTTGAGGATACT-----------------------------------------TAGAAGACCTAGACTAAACTAAGCCTGTAATAGCAATAATA---TTGTAAGTGAATTTGCTGCTTTTAATTGA---------------------------------------------------------------------------------------------------------------TTGTCA----TTTATTTTAGTGCGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................................................................G------CTGCTTCTGGTGCTGATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGGCCAAGACGTTTGT...	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGGAGGCCAAGACG........	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACCTGGAGGCCAAGAC.........	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGACCTGGAGGCCA.............	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGACCTGGAGGCC..............	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATAGCGGGCATTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGACCTGGAGGCCAAG...........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................T---------GCTG------CTGCTTCTGGTGCTGATAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACCTGGAGGCCAAGACG........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGACCTGGAGG................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGCCAAGACGTTTGTGAA	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGCCAAGACGTTTGTGA.	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................TA---ATTTTGCGTGTTTGA-AAT------.....................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTGACCTGGAGGCCAAG...........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TCTGGTGCTGATAGCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAAGACGTTTGTGAA	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACCTGGAGGCCAAGAC.........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................ATA-------ACTTTA---AATCATA---AGC...........................................................................................................................................................................................................................................................................................................................................................................................	19	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TTCTG-------------------------------------------GAGGAGATGGGCCT---------GCTG---------ATACTGGTGCTGATAGTGGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCTGAGGTTTCGC--AAAGATC-----------------------------------------------------CCACA--AAAATATGAGGT-TTT--GATA-----CCATTCACCAAAATCATA----TTTTGCGTGTTTCA-AAT------AAGTCTTACT--------TGAAT---------------TAA--TATATAATCAGTGGATACTTTTAACATCGATTGTGGTTCTAGTACGAGACTAAGGAGACTTAG---------G-----------------------------------------------TTCATATAATTGCTAAAT----------------------------------------------------------TATAAAAAATATAAATTAATTAAAATATAAT-------------TGC-TTGCTA----TATGTTTTAGTACGCAACTGCAGCAGCCAACATTGACCTGGAGGCAAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTGACCTGGAGGCA..............	19	1	2.00	2	0	0	0	0	2	0	0
.............................................................T---------GCTG---------ATACTGGTGCTGATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGCAGCAGCCAACATTGACCT.....................	25	1	1.00	1	1	0	0	0	0	0	0
..........................................................................G---------ATACTGGTGCTGATAGTGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAACTGCAGCAGCCA...............................	19	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGGCAAAGACG........	20	1	1.00	1	1	0	0	0	0	0	0
.TCTG-------------------------------------------GAGGAGATGGGCCT---------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGGCAAAGACGTTTGTGAA	28	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGACCTGGAGGCG..............	20	1	1.00	1	0	0	0	0	1	0	0
....G-------------------------------------------GAGGAGATGGGCCT---------GCTG---------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	1	0	0	0	0	0	0

droYak3

TTCCA-------------------------------------------GAGAAGATGGGCCT---------GCTG---------CTACTGGTGCTGATAGCAGGCATTGGCGTAAGCACTGTACCGATTAAATA-------------------------------------------------------------ATCATTGGTTCCGC--AAAGATC-----------------------------------------------------CCACA--AAAAGATTAGGT-CTTAAAAAA-------ACTCTA---AATGATG---ATTTTGCGTGTTTGA-AAT------ATGTTTCATT--------TGGATTCATT----------ATATACATATAATAAGTGGATA-------------TTGTGGTCCTAGTATGAGACTAAGGAGACTTAGGAGACTTA------ATAAAGTCTTTGATAACAACCATA---TTGAAAGTGAACTTGC--------------------------------------------------------------------------------------------------------------------------------TA----TATATTTTAGTACGCAACTGCAGCAGCCAACATTGACCTGGAGGCCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCTGGAGGCCAAGACGTTTGTGA.	27	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................TGGTGCTGATAGCAGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................G---------CTACTGGTGCTGATAGCAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................GCTG---------CTACTGGTGCTGATAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

TTCCA-------------------------------------------GGGGAGATGAGCCT---------GCTGCTG---CTGCTGGTGCTGCTGATAGCCGGCATTGCCGTAAGCATTATAGCGATTAAATA----------------------------------------------------------ATAATCTTTGATTCAACCATGAGATC-----------------------------------------------------TTAAC--AAAA----TAGC-TCGAAACAC-------AAATTA---ACTCATC---TTATTGCGTATCAAGAAAT------GTGTTTCATT--------TTGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TTCCC-------------------------------------------GAGGAGATGGGCCT---------GCTG------------CTGCTGCTGATAGCAGGCGTTGCCGTAAGCATTG---CGATTAAGTA-------------------------------------------------------------ATCTCT------GC--CGAGATC-----------------------------------------------------CCACC--GAAA-ATGTAGT-TTGAAACCA-------AGTTTA---ACTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TTCCA-------------------------------------------GAGGAGATGGGCCT---------GCTG------------CTGCTGCTGATAGCGGGCATTGGCGTAAGCATTGTAGCGATTAAGTA-------------------------------------------------------------ATCATTGAT--------GAGTTT-----------------------------------------------------ACACT--AAG-GAATTGGT-TAAAAATAG-------ACTTTA---ACTCGTC---GTATTGCGTTTTAAG-AATTGGCTAATGTTTTATT--------AAGATTCGAGTCTCTCGAGCTTC--TATTTTACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTCCA-------------------------------------------GAGGAGATGAGCCT---------GCCG------CTGCTCCTACTACTGATAGTGGGCATTGCCGTAAGCATGGTTGCGATTAAATA-------------------------------------------------------------ATCTTTGATTCCGTGCTAAGATC-----------------------------------------------------TCTCAGAAAA-CAT-TGATTTTAAAATAC-------ATTCCA---ACGCATC---TTATTGCGTAGCTGA-AAA------AAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATTTT-------------------------------------------GAT-----------------------------------------------ATTTTTTTTTGGTTTGAACTCTAT-----------A-------------------------------------------------------------ATAACTTGCTTAAG--AAAAAGC-----------------------------------------------------TTTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGATTCGA---TTCGATG---ATAATTC----------TAAT---------------------------------------------------------------------------------------AC--------------AATGTTTTTTCT----TTAACTTAAGTGCGCAAATGCGGCTGCCAACTTTGACCTCGAGGCCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGATCCGA---CGAAGCGTGGACCTTCC----TTAATTGG-T---------------------------------------------------------------------------------------TT--------------AATGGCTTTTCC----CGAATTGTAGTGCGCAAATGCAGCTGCCAACGCTGACCTGGAGGCCAGGACGTTTGCGAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTCCT-------------------------------------------AAGAAGATGAGCCT---------GCTG------CTGCCGCTGCTGCTGATAGCAGGCATTGGCGTAAGCATTTTAGAGTTTATATTATAGAGATTATTTAATAACAAAAAGAGATTATTTTATAATAATAGAGATTATTTAGTAACAATATTTGATGTCAGTTTGAGATA-----------------------------------------------------TTATACAAAA-AATGTA-TTTTAAAAGTTTCTTAA-AGTCAT---CATCATC---TTATTGCGTATTTTG-TTT------GCGTCT----------------------------------------TTCGTTTTCTAATAATACAAATCTTAATT-TGCTTTTAAATAAAGTTTTAAGTAGAT---------TATTTCATATGCAATCTTTTCCTTTATACATTTGTCTAAAAATGAACCTTGT------------------------------------------TTCAACCCAAA--------------------TATCATCTTAA--ATGTTTATTAATAC--------------------------CTC----CTTATCTCAGTGCACCTCTGCGGCTGCCAATCTTGACCTGGAGGCCAAGACGTTTGTGAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TTCCG-------------------------------------------GCGGAGATGAGTCT---------ACGGAGTATGGTGCTCCTGCTGCTGATAGCTGGAATTGGCGTAAGCATTTTGTGGATTAAATA-------------------------------------------------------------ATCAGTGATTTTAC--TATAAACTTAATGTTGTGGTGGGCCTGCCAGAAGAAAATTAATGACATGATTAATTTTAGCTCCA--AAAATATTATAA-CTTAAGATT-------ATAATA---TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCAAAT----------------------------------------------------------TATTATTAG--AAAATCAACAAGATTGTAATTGATATTTTTGGATGGG-----ATATTCCCATTTCAGTGCGCCTCGGCGGCAGTTAATTATGACCTCGAGGCCAAGACTTTTGTGAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................GCGGAGATGAGTCT---------ACGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0
................................................GCGGAGATGAGTCT---------ACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
.........................................................................................GCTGCTGATAGCTGGAATTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTCGAGGCCAAGACT........	20	1	1.00	1	1	0	0	0	0	0
.............................................................................TATGGTGCTCCTGCTGCTGATAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGCAGTTAATTATGACCTCGAGGCC..............	28	1	1.00	1	1	0	0	0	0	0
...............................................................................TGGTGCTCCTGCTGCTGATAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGACCTCGAGGCCAAGACT........	22	1	1.00	1	1	0	0	0	0	0
............................................................................GTATGGTGCTCCTGCTGCTGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0

droBip1

TTCCAGATTACGGATTACGAGTTCCAGATTCCG---------------GCGGAGATGAGTCT---------ACGGAGCGTGGTGCTTCTGCTGCTGATAGCTGGCATTGGCGTAAGCGTTTTATGGATTAAATA-------------------------------------------------------------ATCTAAGATTCCAC--CATAAAATTAAAGATTTGATGGATCCATATGTTTAAAATAAATGATGTTGTTAATTTTAGTTCCA--AAAATA--------------------------------------------------------------GTCTAAAATATTAATTTTATAACAAATATTGAATCT------------------------------------------TTTTGGAACTAAAATTGGGTTAAGGTCACA----------------------------------ATACA------------------------------TTTTCAAAAACCATAAAAACAACAAGAAATAACTTACAACTTAAACAGATCTACATTTAATGGAAGATAATTTTGA--AAAATTAATAAGATCTC-ATTGATGTTTTTGGATGGGT------ATTCCCATTTCAGTGCGCCTCGGCAGCAGCTAATTATGACCTCGAGGCCAAGACTTTTGTGAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

TTCCA-------------------------CCT---------------CCGGAGATGATTCT---------CCAGTGT---CTATCCCTGCTGCTGATAGCAGCCATAGGCGTAAGTGA------------------------------------------------------------------------------------GCCACC--AAACATC-----------------------------------------------------TCACA--AAGTG----------------------------------------------------------------GCTAATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-TT----------------------------------------------------C--------------C

Size

Hit Count

Total Norm

Total

M022
Male-body

M040
Female-body

M059
Embryo

M062
Head

V043
Embryo

V051
Head

V112
Male-body

SRR902010
Ovary

SRR902011
Testis

SRR902012
CNS imaginal disc

No Reads

droPer2

TTCCA-------------------------CCT---------------CCGGAGATGATTCT---------CCAGTGT---CTATCCCTGCTGCTGATAGCAGCCATAGGCGTAAGTGA------------------------------------------------------------------------------------GCCACC--AAACATC-----------------------------------------------------TCACA--A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

CTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTGTCAATTATGAACTTCAGGCCAGGACTTTTATCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGGCCAGGACTTTTAT...	20	1	4.00	4	0	0	0	0	4
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTCAATTATGAACTTCAGGCC..............	24	1	3.00	3	3	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAACTTCAGGCCAGGACT........	23	1	3.00	3	2	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACTTCAGGCCAGGAC.........	19	1	2.00	2	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAACTTCAGGCCAGGACT........	21	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCCAGGACTTTTATC..	20	1	1.00	1	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTATGAACTTCAGGCCAGGAC.........	23	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACTTCAGGCCAGGACT........	20	1	1.00	1	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAACTTCAGGCCAGGACC........	21	1	1.00	1	1	0	0	0	0

droVir3

TTTCA-------------------------ACTAAAGTTCTTCAAGGCGAAAAGATGCGCTACGCGTGTCAAGCT------CAGCTGCTGCTGCTGATAGCAGCCATTGGCGTAAGCATAATTC------------------------------------------------------------------------------------A--AAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTTAAATAAT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
................................................GAAAAGATGCGCTACGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................CTTCAAGGCGAAAAGATGCGCTACGCGTGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................CTTCAAGGCGAAAAGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ACCTT-------------------------------------------AGTGGACAACGGCT---------GCC--GT---CAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTACGATCGGCAGGCCAAGACGTTCGTGGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...................................................................................GTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTACGATCGGCAG.................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................GTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTACGATCGGCAGGC...............	22	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGATCGGCAGGCCAA............	18	1	1.00	1	1	0	0	0	0	0

droGri2

TG-------------------------------------------------------------------------------CTGCTGCTACTGCTGATAGCAGCTGTTGGCGTAAGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dse_625

scaffold_1:2567927-2568199 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-50.1	-50.1	-50.1