ID:

dse_61

 Coordinate:

scaffold_8:1733353-1733412 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

5pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-45.7 -45.2 -45.0

Flybase annnotation

utr5 [utr5_plus_15688]

No Repeatable elements found

Sense Strand Reads

TGGGTCGACCTGGTCCTTTGGGCGTTCGCCTCCGTGCTGTGGGTGGGTGCAGGCGTGGACGTCAGCACAATGCCTTTGTTTGGCGGCATGTGGATGACGTTCATGTCCACATCCGCACACACATCCGCATCCATATCCGCGACCCCTGACCCTCGCCAGC

***********************************..((((.(((((((..(((((((((((((.((((.((((..........))))))))..)))))))))))))..))))))).))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 V115

head

 V114

embryo

 M054

female body
.......................................................................................ATGTGGATGACGTTCATGTCCA................................................... 22 0 1 225.00 225 167 38 20 0
................................................GCAGGCGTGGAGGTCAGT.............................................................................................. 18 2 2 210.00 420 86 72 89 173
.......................................................................................ATGTGGATGACGTTCATGTCC.................................................... 21 0 1 135.00 135 124 6 4 1
......................................................................................CATGTGGATGACGTTCATGTCCA................................................... 23 0 1 129.00 129 61 31 36 1
..................................................AGGCGTGGACGTCAGCACAATGC....................................................................................... 23 0 1 22.00 22 14 3 5 0
..................................................AGGCGTGGACGTCAGCACAATG........................................................................................ 22 0 1 20.00 20 13 3 2 2
...............................................GGCAGGCGTGGAGGTCAG............................................................................................... 18 2 6 18.17 109 22 4 6 77
......................................................................................CATGTGGATGACGTTCATGTCC.................................................... 22 0 1 18.00 18 7 7 3 1
.......................................................................................ATGTGGATGACGTTCATGTC..................................................... 20 0 1 17.00 17 17 0 0 0
..................................................AGGCGTGGACGTCAGCACAATGCC...................................................................................... 24 0 1 14.00 14 8 2 4 0
................................................GCAGGCGTGGAGGTCAGTG............................................................................................. 19 3 20 5.50 110 47 11 1 51
........................................................................................TGTGGATGACGTTCATGTCCA................................................... 21 0 1 5.00 5 5 0 0 0
......................................................................................CATGTGGATGACGTTCATGTC..................................................... 21 0 1 5.00 5 3 0 2 0
.......................................................................................ATGTGGATGACGTTCATGT...................................................... 19 0 1 5.00 5 4 1 0 0
.......................................................................................ATGTGGATGACGTTCATGTCCAC.................................................. 23 0 1 5.00 5 2 1 1 1
.......................................................................................ATGGGGATGACGTTCATGTCCA................................................... 22 1 1 3.00 3 3 0 0 0
......................................................................................CATGTGGATGACGTTCATGTCCAC.................................................. 24 0 1 3.00 3 2 1 0 0
............................................GTATGCAGGCGTGGAGGTCAG............................................................................................... 21 3 1 2.00 2 0 0 0 2
.......................................................................................ATGTGGATGACGTTCATGACC.................................................... 21 1 1 2.00 2 2 0 0 0
..................................................AGGCGTGGACGTCAGCACAAT......................................................................................... 21 0 1 2.00 2 2 0 0 0
......................................................................................CATGTGGATGACGTTCATTTCCA................................................... 23 1 1 2.00 2 2 0 0 0
.......................................................................................ATGTGGATGACGTTCATGTCT.................................................... 21 1 1 2.00 2 2 0 0 0
.......................................................................................ATGTGGATGACGTTCATGTCCT................................................... 22 1 1 2.00 2 1 1 0 0
...............................................GGCAGGCGTGGAGGTCAGC.............................................................................................. 19 2 4 1.50 6 5 0 1 0
.......................................................................................ATGTGGATGACGTGCATGTCCA................................................... 22 1 1 1.00 1 0 0 1 0
........................................................................................TGTGGATGACGTTCATGTC..................................................... 19 0 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGACGACGTTCATGTCCA................................................... 22 1 1 1.00 1 1 0 0 0
......................................................................................CATGTGGATGACGTTCGTGTCCAC.................................................. 24 1 1 1.00 1 0 1 0 0
.......................................................................................ATGGGGATGACGGTCATGTCCA................................................... 22 2 1 1.00 1 1 0 0 0
...................................................AGCGTGGACGTCAGCACAATGCCA..................................................................................... 24 2 1 1.00 1 0 0 0 1
.......................................................................................ATGTGGATGACGTTCATGACCA................................................... 22 1 1 1.00 1 1 0 0 0
.................................................CAGGCGTGGAGGTCAGTA............................................................................................. 18 2 1 1.00 1 0 1 0 0
............................................GAGTGCAGGCGTGGAGGTCAGT.............................................................................................. 22 3 1 1.00 1 0 0 0 1
......................................................................................CATGTGGATGACGTTCATGTCCAA.................................................. 24 1 1 1.00 1 0 0 1 0
.......................................................................................ATGTCGATGACGTTCATGTCCA................................................... 22 1 1 1.00 1 0 0 0 1
.......................................................................................ATGTGGATGACGTTCATGTCCC................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGCTGACGTTCATGTCCA................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGCTCATGTCCAC.................................................. 23 1 1 1.00 1 1 0 0 0
.......................................................................................ATGAGGATGACGTTCATGTCCAC.................................................. 23 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCCTGTCC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATCTCC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTCGATGACGTTCATGTCC.................................................... 21 1 1 1.00 1 0 0 0 1
.......................................................................................AAGTGGATGACGTTCATGTCCA................................................... 22 1 1 1.00 1 0 1 0 0
.......................................................................................ATATGGATGACGTTCATGCCCA................................................... 22 2 1 1.00 1 1 0 0 0
........................................................................................AGTGGATGACGTTCATGTCCA................................................... 21 1 1 1.00 1 1 0 0 0
...................................................GGCGTGGACGTCAGCACAATG........................................................................................ 21 0 1 1.00 1 1 0 0 0
..................................................AGGCGTGGACGTAAGCAAAATG........................................................................................ 22 2 1 1.00 1 0 0 1 0
.......................................................................................ATGTGGATGACGTTCGTGTC..................................................... 20 1 1 1.00 1 1 0 0 0
..................................................AGGCGTGGACGTCAGCCCAATGC....................................................................................... 23 1 1 1.00 1 0 0 1 0
..................................................AGGCGTGGACGTTAGCACAATG........................................................................................ 22 1 1 1.00 1 0 0 1 0
.......................................................................................ATGTGGATGACGTTCATGCCCA................................................... 22 1 1 1.00 1 1 0 0 0
...............................................TGCAGGCGTGGAGGTCAGT.............................................................................................. 19 2 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATGGCCA................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCACGTCC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATGTCCATT................................................. 24 2 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGCCGTTCATGTCC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGCTCATGTCC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATTTCCA................................................... 22 1 1 1.00 1 0 0 0 1
......................................................................................CATGTGGATGGCGTTCATGTCCA................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATGAC..................................................... 20 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTCGATGACGTTCATGTCCAC.................................................. 23 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGCTCATGTCCA................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................ATGTGGATGACGTTCATA....................................................... 18 1 2 0.50 1 0 1 0 0
............................................GTATGCAGGCGTGGAGGTCA................................................................................................ 20 3 6 0.50 3 2 0 0 1
................................................GCAGGCGTGGAGGTCAGGA............................................................................................. 19 2 2 0.50 1 1 0 0 0
..............................................ATGCAGGCGTGGAGGTCAGT.............................................................................................. 20 3 8 0.38 3 1 2 0 0
......................................................................................CATGTGGATGACGGGCATG....................................................... 19 2 3 0.33 1 0 0 1 0
................................................GCAGGCGTGGATGTCAGT.............................................................................................. 18 2 6 0.33 2 0 1 0 1
..............................................ATGCAGGCGTGGAGGTCA................................................................................................ 18 2 6 0.33 2 0 0 0 2
.......................................................................................ATGTGGATGAAGTTCATGTCC.................................................... 21 1 3 0.33 1 1 0 0 0
................................................GCAGGCGTGGAGGTCAGTAA............................................................................................ 20 3 4 0.25 1 1 0 0 0
..............................................AGGCAGGCGTGGACGTCAGT.............................................................................................. 20 3 4 0.25 1 0 0 0 1
.................................................CAGGCGTGGAGGTCAGGACG........................................................................................... 20 3 4 0.25 1 0 0 0 1
..............................................AGGCAGGCGTGGACGTCA................................................................................................ 18 2 4 0.25 1 0 0 1 0
..............................................GGGCAGGCGTGGAGGTCAGT.............................................................................................. 20 3 10 0.20 2 1 0 0 1
.............................................AGTGCAGGCGTGGAGGTC................................................................................................. 18 2 5 0.20 1 1 0 0 0
...............................................GGCAGGCGTGGAGGTCAGA.............................................................................................. 19 3 15 0.20 3 3 0 0 0
...............................................CGCAGGCGTGGAGGTCAGT.............................................................................................. 19 3 16 0.19 3 1 0 0 2
............................................GTGGGCAGGCGTGGAGGTCA................................................................................................ 20 3 8 0.13 1 1 0 0 0
..............................................GGGCAGGCGTGGAGGTCA................................................................................................ 18 2 8 0.13 1 0 0 1 0
...............................................GGCAGGCGTGGACGTCAGTG............................................................................................. 20 3 11 0.09 1 0 0 0 1
............................................GTATGCAGGCGTGGAGGTC................................................................................................. 19 3 16 0.06 1 0 0 0 1
..............................................AAGCAGGCGTGGAGGTCAG............................................................................................... 19 3 17 0.06 1 0 0 0 1
...............................................AGCAGGCGTGGAGGTCAGT.............................................................................................. 19 3 17 0.06 1 0 0 0 1
...........................................CGAGTGCAGGCGTGGAGGT.................................................................................................. 19 3 20 0.05 1 0 0 0 1
.......................GTTCGCCTCCCTGCTTCGG...................................................................................................................... 19 3 20 0.05 1 1 0 0 0
.............................................TAGGCAGGCGTGGACGTC................................................................................................. 18 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

ACCCAGCTGGACCAGGAAACCCGCAAGCGGAGGCACGACACCCACCCACGTCCGCACCTGCAGTCGTGTTACGGAAACAAACCGCCGTACACCTACTGCAAGTACAGGTGTAGGCGTGTGTGTAGGCGTAGGTATAGGCGCTGGGGACTGGGAGCGGTCG

************************************..((((.(((((((..(((((((((((((.((((.((((..........))))))))..)))))))))))))..))))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body
...........................................................GCAGTCGTGGTGCGGAAAAAA................................................................................ 21 3 4 0.25 1 1 0
...................................................................................................AAGTACAGTCGTAAGCGTG.......................................... 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_8:1733303-1733462 + dse_61 confident TGG---GTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CGT------------------------------------------------------------GCTGT--GGGT------GGGTGCAGGCGTGGACGTCAGCACAATGCCTTTGT---TTGGCGGCATGTG-GATGACGTT---CATGTCCACATCCGCACAC----ACATCCGCATCCATATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------GCCAGC-
droSim2 x:18340461-18340620 + dsi_70 confident TGG---GTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CTT------------------------------------------------------------GCTGT--GGGT------GGGTGCAGGCGTGGACGTCAGCACAATGCCTTTGT---TTGGCGGCATGTG-GATGACGTT---CATGTCCACATCCGCACAC----ACATCCGCATCCATATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------GCCGGC-
dm3 chrX:19451008-19451174 + dme-mir-2499 Known_mirbase TGGTGTGTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTGCGTGCGTAGACGTCAGCGCAATGCCTTTGT---TTGGCGGCATGCG-GATGACATT---CACGTCCGTATCCGCACAC----ACATCCGCATCCATAT----------------------------------------------------------------------------------------------------------------------------ATCCGCAACCCCCGACC-------ATC----------GCCAGC-
droEre2 scaffold_4690:9687352-9687511 + der_112 confident CGG---GTCGAACTGGGCCTTTGGGCGCTCCTTTC--------------------CTG------------------------------------------------------------GCTGT--GAGT------GGGTGCGTGCGTTTATGTCAGCGCAATGCTTTTGT---TTGGCGGCATGCG-GATGGCATA---CACGTCCACATCCGCACAC----ACATCCGCATCCGTATCA------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CCT----------GCCAGC-
droYak3 X:11887415-11887574 - dya_49 confident TGG---GTCCACCTGGTCCTTTGGGCGCTCTCCTC--------------------CTT------------------------------------------------------------GCTGT--GAGC------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGTCGGCATGCG-GATGGCGTA---CACGTCCACATCCGCACAC----ACACACGCATCTGTATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------CCCAGC-
droEug1 scf7180000409109:1895-2081 - TGC---GATTGCCTGCCACT-----------------------------------CTT------------------------------------------------------------TCTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGCCGGCATGCG-GATGGCGTA---CACGTCCACATCCGCGCAC----ACATTCGCAACAATATCCGCA-TATGGATTTAC---AACTGCAGCCCTAT---------------------CCA-----------------------------------------------------------CACAGGCATTCGCGATCCCTGACC-------CTT----------GCCATC-
droBia1 scf7180000302069:1152980-1153166 - TTC---CCGATC-----------------------CCGTTTCC------------GCA------------------------------------------------------------CCTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TGGATGGCATGCG-GATGGCGTA---CACGTCCACATCCGCGCAC----ATATTCGCATCAGCTTCCGCT-TCCGCATTCAC---GGCTGCAGCCCTAT---------------------CCG-----------------------------------------------------------CACGGACATCCGCGACCCCTGGCC-------ACC----------GCCCGC-
droTak1 scf7180000415169:846439-846599 - -----------------------------------------------------------------------------------------------------------------------CTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGTCGGCATGCG-GATGGCGTA---TACGTCCTCATCCGCACAC----ACATCCGCATCGGCATCCACA-------TTTGC---AACTGCAGCCATAT---------------------CCG-----------------------------------------------------------CGCACACATCCGCGCGACCTGACC-------ACC----------GCCTGCT
droEle1 scf7180000490751:1116734-1116912 + CAA---TCTGG--AGGTCCTTCA--------CGCC--------------------GGA------------------------------------------------------------TTTTT--GTGT------GTGTGATGGGGTTGGAGTCAGCGCAATGCCATTGT---TTGCCGTCATGCG-GCTGGCTCG---CAGATAGACATCCACATCC----ACATCCGCATCCGCAT-----------------TACAAGTGCAGCAAACT---------------------TCG-----------------------------------------------------------CCACCC-----CTGACCCCTGACC-------CCTCCCC----T-GCCTGC-
droRho1 scf7180000761121:191825-191996 - TGT---GTTGG--AGGTCCTTCAG--------ATCCAG------------------TT------------------------------------------------------------TCTGC--GTGT------GTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTGCCGGCATGTG-GCTGCCGTG---CACGTCCACATCCGCATCC----GCACCCGCATCCGCATCCGCAT-----------TACAAGTGCAGCAACAT---------------------CCG-----------------------------------------------------------C---------------TCCAGACC-------CCT----------GGCTGC-
droFic1 scf7180000454073:1729630-1729926 + TGG---TTCCCAC--TTCCATTC------------CGGTTTCTGTTCCTGCAACTGTTTCTGCATCTGTATTCGTTCCTGTAAATGTATCTGGATTTGTTTCGGTTAATTCATCTGCATTTGT--GTGC------GTGTTTCGACGTTGGCGTCAGCGCAGTGCCATTGTTATTTGCCGGCATGCG-GTTGGCGTG---CGCGTCGACATCCGCATTTCTATACAACCATTTCTAC------T-CCTGAATTC-----TACTGCTACT---------------------------G------------CTGGATGCTACTACTGGATGCTACTGCTGAATGCTACTGCCGAATGCCACT-GCAACTGCGACTCCGGAT----------------------------
droKik1 scf7180000302517:1182249-1182392 + TG------------------------------------------------------------------------------------------------------------------------T--GTGC------GTGTGTTATCGTTGGTGTCAGCGCAATGCCGTTGT---TTGCCGGCATGCA-GCTAATGTC---AATGTCTACATCCGCACCC----GCACTCGCACATCTA----------------------GATGCAGTTA--------------------------G-----------------------------------------------------------T---------------CCTCAACCCTTGGACATCCACCTCCTTGTACAGC-
droAna3 scaffold_13417:2469633-2469803 - dan_228 confident GGC---ACCGACT---------------------------------------------------------------------------------------------------------TCTGT--GTGTGTGTGCGTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTGCCGGCATGCG-GCTGGCGTG---CACGTCTACATCCGCACCT----GCATCCACAT-----------------------AGCAGCTGCAACAACAAACACG-----GCACTCCGTCTGCGCCGCCCGGGGTG-----------------------------------------------C---------------TCTA-------------G----------TCCTGT-
droBip1 scf7180000395874:41969-42121 - TG------------------------------------------------------------------------------------------------------------------------T--GTGC------GTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTACCGGCATGCG-GCTGGCGTG---CACGTCTACATCCGCACCT----GCATTCACAT-----------------------AGCAGCTGCAACAACAAACACGGCTCGGCACATCGT--C---CACCCGGGGTG-----------------------------------------------C---------------TCAA-------------G----------ACCTGT-
dp5 XL_group1e:12520639-12520639 - C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13042:909667-909776 - G------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTGT---T--ATGGCAGGTGGGCAGGTGTCATCAATAGCCGCATCC--AGGC----ACATCCGCATCCACATCCGT-------------TGCAGGTGTCGCATTT------------------------G-----------------------------------------------------------C---------------CCTTACCCTTTAGC-CGG----------GCCGGT-
droGri2 scaffold_15081:2046301-2046381 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGGCATGCG-GCAGGTGTC---AACG-CCACGTCCTCATTT----GCATCCGCTTCCGCATCC------------------------------------------------------------------------------------------------------------------------------GCATCCGCTGTCG-------CAT----------TTCCCC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TGG---GTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CGT------------------------------------------------------------GCTGT--GGGT------GGGTGCAGGCGTGGACGTCAGCACAATGCCTTTGT---TTGGCGGCATGTG-GATGACGTT---CATGTCCACATCCGCACAC----ACATCCGCATCCATATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------GCCAGC-SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................221225.0022501672038
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCC........................................................................................................................................................................................................211135.00135112446
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................231129.001291613631
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGC..................................................................................................................................................................................................................................................23122.002201453
.............................................................................................................................................AGGCGTGGACGTCAGCACAATG...................................................................................................................................................................................................................................................22120.002021323
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCC........................................................................................................................................................................................................22118.00181737
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTC.........................................................................................................................................................................................................20117.001701700
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCC.................................................................................................................................................................................................................................................24114.00140842
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................2115.0050500
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTC.........................................................................................................................................................................................................2115.0050320
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGT..........................................................................................................................................................................................................1915.0050401
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCAC......................................................................................................................................................................................................2315.0051211
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCAC......................................................................................................................................................................................................2413.0030201
.............................................................................................................................................AGGCGTGGACGTCAGCACAAT....................................................................................................................................................................................................................................................2112.0020200
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCT........................................................................................................................................................................................................2112.0020200
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCT.......................................................................................................................................................................................................2212.0020101
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTC.........................................................................................................................................................................................................1911.0010100
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCAA......................................................................................................................................................................................................2411.0010010
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCC.......................................................................................................................................................................................................2211.0010100
..............................................................................................................................................GGCGTGGACGTCAGCACAATG...................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCATT.....................................................................................................................................................................................................2411.0010100
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATA...........................................................................................................................................................................................................1820.5010001
droSim2
TGG---GTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CTT------------------------------------------------------------GCTGT--GGGT------GGGTGCAGGCGTGGACGTCAGCACAATGCCTTTGT---TTGGCGGCATGTG-GATGACGTT---CATGTCCACATCCGCACAC----ACATCCGCATCCATATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------GCCGGC-SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................AGGCGTGGACGTCAGCACAATG...................................................................................................................................................................................................................................................2213360.003360010014200002003339002
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCC.................................................................................................................................................................................................................................................2411448.0014481250083101001011334001
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGC..................................................................................................................................................................................................................................................231405.00405040011620100200278002
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCAC......................................................................................................................................................................................................231235.0023500008010000900145000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGT..........................................................................................................................................................................................................191183.0018300001920000000162000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCC........................................................................................................................................................................................................211136.001360600934000020031000
.............................................................................................................................................AGGCGTGGACGTCAGCACAAT....................................................................................................................................................................................................................................................211122.001220000601000000061000
.............................................................................................................................................AGGCGTGGACGTCAGCACAA.....................................................................................................................................................................................................................................................201106.001060100620000000043000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATG...........................................................................................................................................................................................................18196.00960000813000000012000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGT..................................................................................................................................................................................................................................................23195.0095000000000000095000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTT.........................................................................................................................................................................................................20194.0094000000000000094000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................22187.00870300190000091055000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTC.........................................................................................................................................................................................................20159.00591001391000000017000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCCT................................................................................................................................................................................................................................................25157.0057010030000000053000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATT...................................................................................................................................................................................................................................................22151.0051000000000000051000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATTT..................................................................................................................................................................................................................................................23147.0047000000000000047000
.............................................................................................................................................AGGCGTGGACGTCAGCACA......................................................................................................................................................................................................................................................19140.0040000037000000003000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCAC......................................................................................................................................................................................................24140.0040030029000004004000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTC.........................................................................................................................................................................................................21137.0037010080020010025000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTTT........................................................................................................................................................................................................21336.671100000000000000110000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCT.................................................................................................................................................................................................................................................24133.0033000000000000033000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATG...........................................................................................................................................................................................................19131.00310000151000000015000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCC........................................................................................................................................................................................................22128.00282010100001020012000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGT..........................................................................................................................................................................................................20127.0027000000000000027000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................23126.0026030010100010020000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCCA................................................................................................................................................................................................................................................25125.0025000000000000025000
....................................................................................................................................................................................CATGTG-GATGACGTT---CAT............................................................................................................................................................................................................18122.0022000019200000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCACA.....................................................................................................................................................................................................24120.0020000010000000019000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGTT.................................................................................................................................................................................................................................................24119.0019000000000000019000
.............................................................................................................................................AGGCGTGGACGTCAGCAC.......................................................................................................................................................................................................................................................18118.0018000018000000000000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATTTT.................................................................................................................................................................................................................................................24114.0014000000000000014000
..............................................................................................................................................GGCGTGGACGTCAGCACAATGCC.................................................................................................................................................................................................................................................23110.0010000000000000010000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCT........................................................................................................................................................................................................2119.00901000000000008000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCAT......................................................................................................................................................................................................2317.00700000000000007000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCA.................................................................................................................................................................................................................................................2417.00700000000000007000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCTT.......................................................................................................................................................................................................2217.00700000000000007000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATA...................................................................................................................................................................................................................................................2216.00600000000000006000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCAA......................................................................................................................................................................................................2316.00600000000000006000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATTA..................................................................................................................................................................................................................................................2315.00500000000000005000
.............................................................................................................................................AGGCGTGGACGTCAGCACTT.....................................................................................................................................................................................................................................................2024.50900000000000009000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTA.........................................................................................................................................................................................................2014.00400000000000004000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGA..................................................................................................................................................................................................................................................2314.00400000000000004000
..............................................................................................................................................GGCGTGGACGTCAGCACAATGC..................................................................................................................................................................................................................................................2213.00300000000000003000
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTCCAC......................................................................................................................................................................................................2213.00300002000000001000
............................................................................................................................................CAGGCGTGGACGTCAGCACAATG...................................................................................................................................................................................................................................................2312.00200000000000002000
.............................................................................................................................................AGGCGTGGACGTCAGCACC......................................................................................................................................................................................................................................................1912.00220000000000000000
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................2112.00200000000000002000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCCTT...............................................................................................................................................................................................................................................2612.00200000000000002000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCTT......................................................................................................................................................................................................2312.00200000000000002000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTTA........................................................................................................................................................................................................2112.00200000000000002000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTT.........................................................................................................................................................................................................2112.00200000000000002000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCACT.....................................................................................................................................................................................................2412.00200000000000002000
.............................................................................................................................................AGGCGTGGACGTCAGCACAT.....................................................................................................................................................................................................................................................2012.00200000000000002000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCTTT......................................................................................................................................................................................................2331.33400000000000004000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCATT.....................................................................................................................................................................................................2411.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCA........................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCACAT....................................................................................................................................................................................................2511.00100001000000000000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGA..........................................................................................................................................................................................................1911.00100000000000001000
............................................................................................................................................CAGGCGTGGACGTCAGCACAATGC..................................................................................................................................................................................................................................................2411.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGTA.................................................................................................................................................................................................................................................2411.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATAA..................................................................................................................................................................................................................................................2311.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGCGA................................................................................................................................................................................................................................................2511.00100000000000001000
................................CTC--------------------CTT------------------------------------------------------------GCTGT--GGGT------GGGTG..........................................................................................................................................................................................................................................................................2011.00100001000000000000
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTCCTTT.....................................................................................................................................................................................................2311.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACATG....................................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCACG.....................................................................................................................................................................................................2411.00100000000001000000
.............................................................................................................................................AGGCGTGGACGTCAGCATTT.....................................................................................................................................................................................................................................................2071.00700000000000007000
......................................................................................................................................................................................TGTG-GATGACGTT---CATGT..........................................................................................................................................................................................................1811.00100001000000000000
.....................................................................................................................................................................................ATGTG-GATGACGTT---C..............................................................................................................................................................................................................1511.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGTTA................................................................................................................................................................................................................................................2511.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCAT.......................................................................................................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTTG........................................................................................................................................................................................................2111.00100000000000001000
......................................................................................................................................................................................TGTG-GATGACGTT---CATGTCC........................................................................................................................................................................................................2011.00100001000000000000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGTCCT.......................................................................................................................................................................................................2211.00100000000000001000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGA..........................................................................................................................................................................................................2011.00100000000000001000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCCAA......................................................................................................................................................................................................2411.00100000000000001000
.................................................................................................................................................GTGGACGTCAGCACAATGCC.................................................................................................................................................................................................................................................2011.00100000000001000000
........................................................................................................................................................................................TG-GATGACGTT---CATGTCCA.......................................................................................................................................................................................................1911.00100010000000000000
.............................................................................................................................................AGGCGTGGACGTCAGCACAAA....................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCACAATGTG.................................................................................................................................................................................................................................................2411.00100000000000001000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATGTCA........................................................................................................................................................................................................2211.00100000000000010000
....................................................................................................................................................................................CATGTG-GATGACGTT---CATT...........................................................................................................................................................................................................1911.00100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATGAT.........................................................................................................................................................................................................2020.50100000000000001000
.............................................................................................................................................AGGCGTGGACGTCAGCATT......................................................................................................................................................................................................................................................1930.33100000000000001000
.....................................................................................................................................................................................ATGTG-GATGACGTT---CATTA..........................................................................................................................................................................................................1930.33100000000000001000
dm3
TGGTGTGTCGACCTGGTCCTTTGGGCGTTCGCCTC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTGCGTGCGTAGACGTCAGCGCAATGCCTTTGT---TTGGCGGCATGCG-GATGACATT---CACGTCCGTATCCGCACAC----ACATCCGCATCCATAT----------------------------------------------------------------------------------------------------------------------------ATCCGCAACCCCCGACC-------ATC----------GCCAGC-SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCG.......................................................................................................................................................................................................2214552.00455200000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000200600002090000000000000000000000000000010000000000000000020002204200000015121300000000000000001001101014030000000220000052239510505046105604500217720180
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCC........................................................................................................................................................................................................2112856.002856000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000003000000000000000100000000000000000000911000040300000000000000000000000000000000000000000000000000001000000000602050000000000000003001000302103000003035000200322690000005502123022100241040
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGTA.....................................................................................................................................................................................................2411769.001769000000000005000000000001000000000000001010000000000000000000000000000000000000100304400000000400150000010000030140003000000000000000000000000000000000050000000000000001100000101000200000007011000015011600000000000000000000000100000000000000000000006003000010000001403100030000100000100000000080300000001044000001288700000020109000000259190
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCG.......................................................................................................................................................................................................231937.0093700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000101000000000610000000000000000000000000000000000001000000048110000090013000010372030
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGT......................................................................................................................................................................................................231567.005670000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000005000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000001403000080110000000000000000000000000000000000000000000000000000000000001031143001000110000000000001000100000000000000010102810000000000100000084020
.......................................................CTT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................191477.004770000000000000000000000050000000000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000003013000010000000000000000000000000010000000000000000000000000001000001000411300000000000000000000000141000000000011000000035500003023000200000031000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCC........................................................................................................................................................................................................221429.0042900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000370010000000000002000000000002000000000000000030600102013000100000063010
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTC.........................................................................................................................................................................................................201379.003790000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000003021000000000000000000000000010000000000200000002830000007021113200050010
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCGT......................................................................................................................................................................................................241206.002060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000041002000000000000100001001000000000000000000001350000000000000000019020
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGTT.....................................................................................................................................................................................................241205.00205000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000400000000000000000000000000000000000000000000000000000000000000015100000012000000000000000000000000000000000000650000000000001100074020
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCGTA.....................................................................................................................................................................................................251201.002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000003000000006000000000000000000000000000000000000000000000000000000000000001018000000000000000100000001100000000001200000001290000000000200000032020
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTC.........................................................................................................................................................................................................211157.00157000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000001120000001010200000035000
............................................................................................................................................CGTGCGTAGACGTCAGCGCAATGC..................................................................................................................................................................................................................................................241114.001140000000000000000000000000000000000000000100000000000000000000000000000000000000000070000000001001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000005010000000000000000000000000100000000000000000000000000020000000000000000060000000000000000000000000100000000000000000075000000100020000009000
..................................C--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................201108.0010800000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000200000000000000000000760000001000000000025000
............................................................................................................................................CGTGCGTAGACGTCAGCGCAATG...................................................................................................................................................................................................................................................23155.00550000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004020000002000000000000000000000000000000000000000000000010000000000000001020000000000000000000000000001000000000000000036000000000000000003000
.................................TC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................21148.00480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000033000000200000000009000
............................................................................................................................................CGTGCGTAGACGTCAGCGCAATGCC.................................................................................................................................................................................................................................................25143.00430000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000020000010000000000000000000100000001021000000024000000000000000003000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGT..........................................................................................................................................................................................................19141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030020000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000020000000016000000100001000004000
........................................................TT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................18128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000010010000000000000000000000030000000000001000000016000001000000000002000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCGTT.....................................................................................................................................................................................................25127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090010000000000000000000000000000000000000000014000000000000000003000
................................CTC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................22117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000000000010000000000000000000000010000000000000000000011000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGTC.....................................................................................................................................................................................................24116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000005000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCT........................................................................................................................................................................................................21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000013000000000000000001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCA........................................................................................................................................................................................................21114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000006000000110000000003000
..............................................................................................................................................TGCGTAGACGTCAGCGCAATGCC.................................................................................................................................................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001004000000000000000000000001000000000000000000003000000000000000000000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGT..........................................................................................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000104000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCA.......................................................................................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000003000000000000000003000
....................................................................................................................................................................................CATGCG-GATGACATT---CACG...........................................................................................................................................................................................................1917.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000001000000000000000004000
............................................................................................................................................CGTGCGTAGACGTCAGCGCAAT....................................................................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGCT.....................................................................................................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000002000000000000000001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCC.......................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000002000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGTAA....................................................................................................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000
...............................CCTC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTG..........................................................................................................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACG...........................................................................................................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCA........................................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000
..............................................................................................................................................TGCGTAGACGTCAGCGCAATGC..................................................................................................................................................................................................................................................2213.003000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCT.......................................................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGTG.....................................................................................................................................................................................................2413.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000
......................................................................................................................................................................................TGCG-GATGACATT---CACGTCCG.......................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGA......................................................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTT.........................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000
......................................................................................................................................................................................TGCG-GATGACATT---CACGTCCGTA.....................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGTGTCGACCTGGTCCTTTGG..............................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000
......................................................................................................................................................................................TGCG-GATGACATT---CACGTCC........................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCT.......................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................CGTGCGTAGACGTCAGCGCAA.....................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................CGTGCGTAGACGTCAGCGC.......................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
............................................................................................................................................CGTGCGTAGACGTCAGCGCA......................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCCC.......................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGG......................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................ATGCG-GATGACATT---CACGTCCGC......................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000
.................................TC--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTT...........................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................C--------------------CTT------------------------------------------------------------GCTGTGGGTGT------GGTTGC.........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................CATGCG-GATGACATT---CACGTCTT.......................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEre2
CGG---GTCGAACTGGGCCTTTGGGCGCTCCTTTC--------------------CTG------------------------------------------------------------GCTGT--GAGT------GGGTGCGTGCGTTTATGTCAGCGCAATGCTTTTGT---TTGGCGGCATGCG-GATGGCATA---CACGTCCACATCCGCACAC----ACATCCGCATCCGTATCA------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CCT----------GCCAGC-SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCA.......................................................................................................................................................................................................221553.0055310110464770
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCC........................................................................................................................................................................................................211164.001641010142200
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCACA.....................................................................................................................................................................................................241122.00122105094220
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCAC......................................................................................................................................................................................................231103.00103104185120
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTC.........................................................................................................................................................................................................20144.004400104030
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTCCA.......................................................................................................................................................................................................23129.002900002630
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTC.........................................................................................................................................................................................................21111.001100001100
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTCC........................................................................................................................................................................................................2215.0051000130
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTCCAC......................................................................................................................................................................................................2414.0040000400
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCACT.....................................................................................................................................................................................................2413.0030000300
....................................................................................................................................................................................CATGCG-GATGGCATA---CACG...........................................................................................................................................................................................................1912.0020000200
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTCT........................................................................................................................................................................................................2212.0020000200
............................................................................................................................................CGTGCGTTTATGTCAGCGCAATG...................................................................................................................................................................................................................................................2312.0020000020
......................................................................................................................................................................................TGCG-GATGGCATA---CACGTCCACA.....................................................................................................................................................................................................2312.0020000200
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCAT......................................................................................................................................................................................................2312.0020000110
.............................................................................................................................................GTGCGTTTATGTCAGCGCT......................................................................................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCATT.....................................................................................................................................................................................................2411.0010000100
.................................TC--------------------CTG------------------------------------------------------------GCTGT--GAGT------GGGTG..........................................................................................................................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................TTTGT---TTGGCGGCATGCG-GATGG......................................................................................................................................................................................................................2311.0010000100
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGT..........................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................................................GCG-GATGGCATA---CACGTCCAC......................................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................CATGCG-GATGGCATA---CACGTCCAA......................................................................................................................................................................................................2411.0010000100
......................................................................................................................................................................................TGCG-GATGGCATA---CACGTCCA.......................................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCACC.....................................................................................................................................................................................................2411.0010010000
...............................TTTC--------------------CTG------------------------------------------------------------GCTGT--GAGT------GGGTG..........................................................................................................................................................................................................................................................................2111.0010000010
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGC..........................................................................................................................................................................................................1911.0010000010
............................................................................................................................................CGTGCGTTTATGTCAGCGCAATGC..................................................................................................................................................................................................................................................2411.0010000010
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCACTA....................................................................................................................................................................................................2511.0010010000
.....................................................................................................................................................................................ATGCG-GATGGCATA---CACGTCCAA......................................................................................................................................................................................................2311.0010000100
droYak3
TGG---GTCCACCTGGTCCTTTGGGCGCTCTCCTC--------------------CTT------------------------------------------------------------GCTGT--GAGC------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGTCGGCATGCG-GATGGCGTA---CACGTCCACATCCGCACAC----ACACACGCATCTGTATCC------------------------------------------------------------------------------------------------------------------------------GCGACCCCTGACC-------CTC----------CCCAGC-SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCACA.....................................................................................................................................................................................................241131.001310410021240000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCA.......................................................................................................................................................................................................22181.0081010121760000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCAC......................................................................................................................................................................................................23141.0041010000400000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCC........................................................................................................................................................................................................21137.0037200011330000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTCCA.......................................................................................................................................................................................................23114.0014000000140000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTCC........................................................................................................................................................................................................2218.00800000080000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTCCAC......................................................................................................................................................................................................2417.00700000070000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTC.........................................................................................................................................................................................................2017.00700001050010
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTCCACA.....................................................................................................................................................................................................2517.00700010060000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTC.........................................................................................................................................................................................................2114.00400000040000
......................................................................................................................................................................................TGCG-GATGGCGTA---CACGTCCAC......................................................................................................................................................................................................2213.00300000030000
............................................................................................................................................CGTGCGTTGACGTCAGCGCAATG...................................................................................................................................................................................................................................................2312.00200000101000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTCT........................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCACAT....................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGTT.........................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................................TGCGTTGACGTCAGCGCAATGCC.................................................................................................................................................................................................................................................2311.00101000000000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCT.......................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCT........................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCATT.....................................................................................................................................................................................................2411.00100000010000
......................................................................................................................................................................................TGCG-GATGGCGTA---CACGTCCACA.....................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................ATGCG-GATGGCGTA---CACGTCCC.......................................................................................................................................................................................................2211.00100010000000
....................................................................................................................................................................................CATGCG-GATGGCGTA---CACGT..........................................................................................................................................................................................................2011.00100000010000
droEug1
TGC---GATTGCCTGCCACT-----------------------------------CTT------------------------------------------------------------TCTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGCCGGCATGCG-GATGGCGTA---CACGTCCACATCCGCGCAC----ACATTCGCAACAATATCCGCA-TATGGATTTAC---AACTGCAGCCCTAT---------------------CCA-----------------------------------------------------------CACAGGCATTCGCGATCCCTGACC-------CTT----------GCCATC-SizeHit CountTotal NormTotal
No Reads
droBia1
TTC---CCGATC-----------------------CCGTTTCC------------GCA------------------------------------------------------------CCTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TGGATGGCATGCG-GATGGCGTA---CACGTCCACATCCGCGCAC----ATATTCGCATCAGCTTCCGCT-TCCGCATTCAC---GGCTGCAGCCCTAT---------------------CCG-----------------------------------------------------------CACGGACATCCGCGACCCCTGGCC-------ACC----------GCCCGC-SizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------------------------------------------------------------------------------------------------CTGT--GAGT------GGGTGCGTGCGTTGACGTCAGCGCAATGCCTTTGT---TTGTCGGCATGCG-GATGGCGTA---TACGTCCTCATCCGCACAC----ACATCCGCATCGGCATCCACA-------TTTGC---AACTGCAGCCATAT---------------------CCG-----------------------------------------------------------CGCACACATCCGCGCGACCTGACC-------ACC----------GCCTGCTSizeHit CountTotal NormTotal
No Reads
droEle1
CAA---TCTGG--AGGTCCTTCA--------CGCC--------------------GGA------------------------------------------------------------TTTTT--GTGT------GTGTGATGGGGTTGGAGTCAGCGCAATGCCATTGT---TTGCCGTCATGCG-GCTGGCTCG---CAGATAGACATCCACATCC----ACATCCGCATCCGCAT-----------------TACAAGTGCAGCAAACT---------------------TCG-----------------------------------------------------------CCACCC-----CTGACCCCTGACC-------CCTCCCC----T-GCCTGC-SizeHit CountTotal NormTotal
No Reads
droRho1
TGT---GTTGG--AGGTCCTTCAG--------ATCCAG------------------TT------------------------------------------------------------TCTGC--GTGT------GTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTGCCGGCATGTG-GCTGCCGTG---CACGTCCACATCCGCATCC----GCACCCGCATCCGCATCCGCAT-----------TACAAGTGCAGCAACAT---------------------CCG-----------------------------------------------------------C---------------TCCAGACC-------CCT----------GGCTGC-SizeHit CountTotal NormTotal
No Reads
droFic1
TGG---TTCCCAC--TTCCATTC------------CGGTTTCTGTTCCTGCAACTGTTTCTGCATCTGTATTCGTTCCTGTAAATGTATCTGGATTTGTTTCGGTTAATTCATCTGCATTTGT--GTGC------GTGTTTCGACGTTGGCGTCAGCGCAGTGCCATTGTTATTTGCCGGCATGCG-GTTGGCGTG---CGCGTCGACATCCGCATTTCTATACAACCATTTCTAC------T-CCTGAATTC-----TACTGCTACT---------------------------G------------CTGGATGCTACTACTGGATGCTACTGCTGAATGCTACTGCCGAATGCCACT-GCAACTGCGACTCCGGAT----------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TG------------------------------------------------------------------------------------------------------------------------T--GTGC------GTGTGTTATCGTTGGTGTCAGCGCAATGCCGTTGT---TTGCCGGCATGCA-GCTAATGTC---AATGTCTACATCCGCACCC----GCACTCGCACATCTA----------------------GATGCAGTTA--------------------------G-----------------------------------------------------------T---------------CCTCAACCCTTGGACATCCACCTCCTTGTACAGC-SizeHit CountTotal NormTotal
No Reads
droAna3
GGC---ACCGACT---------------------------------------------------------------------------------------------------------TCTGT--GTGTGTGTGCGTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTGCCGGCATGCG-GCTGGCGTG---CACGTCTACATCCGCACCT----GCATCCACAT-----------------------AGCAGCTGCAACAACAAACACG-----GCACTCCGTCTGCGCCGCCCGGGGTG-----------------------------------------------C---------------TCTA-------------G----------TCCTGT-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................TGTGTTGGCGTTGGCGTCAG..........................................................................................................................................................................................................................................................201123.00123200510214
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGCG........................................................................................................................................................................................................................................................221122.00122400109414
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGC.........................................................................................................................................................................................................................................................21191.00912008756
........................................................................................................................................TGTGTTGGCGTTGGCGTCA...........................................................................................................................................................................................................................................................19146.00466003334
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGT.........................................................................................................................................................................................................................................................21123.00232000201
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCT........................................................................................................................................................................................................22122.00226000133
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGCT........................................................................................................................................................................................................................................................22116.00160001150
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCTA.......................................................................................................................................................................................................23113.0013200173
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTC.........................................................................................................................................................................................................21111.0011200360
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGT..........................................................................................................................................................................................................2019.009200142
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGA.........................................................................................................................................................................................................................................................2119.009100080
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCT........................................................................................................................................................................................................2116.006300030
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACG...........................................................................................................................................................................................................1915.005400100
..........ACT---------------------------------------------------------------------------------------------------------TCTGT--GTGTGTGTGCG..............................................................................................................................................................................................................................................................................1915.005200003
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGTT........................................................................................................................................................................................................................................................2214.004100030
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCTTT......................................................................................................................................................................................................2414.004100210
.........GACT---------------------------------------------------------------------------------------------------------TCTGT--GTGTGTGTGCG..............................................................................................................................................................................................................................................................................2013.003100002
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGCGT.......................................................................................................................................................................................................................................................2312.002000020
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCTAC......................................................................................................................................................................................................2312.002200000
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCTAT......................................................................................................................................................................................................2412.002100010
........................................................................................................................................TGTGTTGGCGTTGGCGTCAT..........................................................................................................................................................................................................................................................2012.002000020
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCTT.......................................................................................................................................................................................................2212.002000002
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTT.........................................................................................................................................................................................................2112.002000110
.........................................................................................................................................GTGTTGGCGTTGGCGTCA...........................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGAT........................................................................................................................................................................................................................................................2211.001000010
............................................................................................................................................TTGGCGTTGGCGTCAGCGCAATGC..................................................................................................................................................................................................................................................2411.001000001
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGCA........................................................................................................................................................................................................................................................2211.001000001
.........................................................................................................................................GTGTTGGCGTTGGCGTCAGCT........................................................................................................................................................................................................................................................2111.001000010
.........................................................................................................................................GTGTTGGCGTTGGCGTCAGC.........................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................TGTGTTGGCGTTGGCGTCATT.........................................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGAA........................................................................................................................................................................................................................................................2211.001000010
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CAC............................................................................................................................................................................................................1811.001100000
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGG.........................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGA..........................................................................................................................................................................................................2011.001000010
........................................................................................................................................TGTGTTGGCGTTGGCGTCAA..........................................................................................................................................................................................................................................................2011.001000010
.......................................................................................................................................GTGTGTTGGCGTTGGCGTCAG..........................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCC........................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCTACA.....................................................................................................................................................................................................2411.001100000
.........................................................................................................................................GTGTTGGCGTTGGCGTCAG..........................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................ATGCG-GCTGGCGTG---CACGTCTA.......................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGC..........................................................................................................................................................................................................2011.001000010
.........................................................................................................................................GTGTTGGCGTTGGCGTCAGT.........................................................................................................................................................................................................................................................2011.001000010
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCG........................................................................................................................................................................................................2211.001100000
........................................................................................................................................TGTGTTGGCGTTGGCGTCAC..........................................................................................................................................................................................................................................................2011.001000100
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGTA........................................................................................................................................................................................................................................................2211.001000001
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCTAC......................................................................................................................................................................................................2411.001100000
....................................................................................................................................................................................CATGCG-GCTGGCGTG---CACGTCTC.......................................................................................................................................................................................................2311.001000010
........................................................................................................................................TGTGTTGGCGTTGGCGTCAGTTT.......................................................................................................................................................................................................................................................2320.501000010
..............................................................................................................................TGTGTGTGCGTGTGTTGG......................................................................................................................................................................................................................................................................1840.251000001
droBip1
TG------------------------------------------------------------------------------------------------------------------------T--GTGC------GTGTGTTGGCGTTGGCGTCAGCGCAATGCCATTGT---TTACCGGCATGCG-GCTGGCGTG---CACGTCTACATCCGCACCT----GCATTCACAT-----------------------AGCAGCTGCAACAACAAACACGGCTCGGCACATCGT--C---CACCCGGGGTG-----------------------------------------------C---------------TCAA-------------G----------ACCTGT-SizeHit CountTotal NormTotal
No Reads
dp5
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
No Reads
droVir3
G------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTGT---T--ATGGCAGGTGGGCAGGTGTCATCAATAGCCGCATCC--AGGC----ACATCCGCATCCACATCCGT-------------TGCAGGTGTCGCATTT------------------------G-----------------------------------------------------------C---------------CCTTACCCTTTAGC-CGG----------GCCGGT-SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
No Reads
droGri2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGGCATGCG-GCAGGTGTC---AACG-CCACGTCCTCATTT----GCATCCGCTTCCGCATCC------------------------------------------------------------------------------------------------------------------------------GCATCCGCTGTCG-------CAT----------TTCCCC-SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 07:47 PM