ID:

dse_602

 Coordinate:

scaffold_1:216656-216806 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-51.3 -51.3 -51.2

Flybase annnotation

exon [dsec_GLEANR_3695:1]; CDS [Dsec\GM20885-cds]; intron [Dsec\GM20885-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTCGGCTGGTTTTGGCTACGGGCTTTCTGTCAGCCGTCTTCGGTCCGTGCCCCAACCAGCCCCAGCCAATTGATTAATTCTGTGCGGGCGCGGGTCGCAGGGGGCGGGGCAAGTCAGTCGACGACGACGACAGAAAACGACGCAAAAGTGAACGGCGACGCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
**************************************************.....((((...(((((((....((((...)))).....)))))))..))))((((.((((((.....((((..(((....((.....))......)))..)))).....))))))))))..(((.((((....)))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115
head
 M054
female body
 V114
embryo
................................AAACGCTCGGTGTGCCTGGT....................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
..........................................................AATTCGGCTGGTTTTGGCTGC............................................................................................................................................................................ 21 1 1 1.00 1 0 1 0
........................................................................................................................................................GGTCGCAGGGGGCGGGGC................................................................................. 18 0 1 1.00 1 1 0 0
.................................AACGCTCGGTGTGCCTGAA....................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 1
........................................................................................................................................................................................................................................TGGCTGAAGTTTAGGAAA. 18 2 9 0.11 1 0 0 1
......................................................................................................................................................CGGGACGCAGGGGCCGGAG.................................................................................. 19 3 19 0.11 2 0 2 0
.........................................................................................................................................TTCTGTGAGGGCGTGGGT................................................................................................ 18 2 10 0.10 1 0 1 0
....................................................................................................................................................CTCGGGACGCAGGGGCCGG.................................................................................... 19 3 16 0.06 1 0 1 0
..................................................................TGGTTGTGGCTAAGTGCTTT..................................................................................................................................................................... 20 3 20 0.05 1 1 0 0
.................................................................................................................................................................................................................................TAGAAGCTGGGTGATGGTT....... 19 3 20 0.05 1 1 0 0

Anti-sense strand reads

CGCGTTCCGGGTCTGGACCTTTGTTTAGCGGCTTTGCGAGCCACACGGACCATTCACTTTAAGCCGACCAAAACCGATGCCCGAAAGACAGTCGGCAGAAGCCAGGCACGGGGTTGGTCGGGGTCGGTTAACTAATTAAGACACGCCCGCGCCCAGCGTCCCCCGCCCCGTTCAGTCAGCTGCTGCTGCTGTCTTTTGCTGCGTTTTCACTTGCCGCTGCGCCGCGTCATCGACCGACTACCAATCCTTTA
**************************************************.....((((...(((((((....((((...)))).....)))))))..))))((((.((((((.....((((..(((....((.....))......)))..)))).....))))))))))..(((.((((....)))))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
 V115
head
 V113
male body
...........................................................TAAGCCGACCAAAACCGATGCCC......................................................................................................................................................................... 23 0 1 11.00 11 7 1 3 0
.............................................................AGCCGACCAAAACCGATGCCC......................................................................................................................................................................... 21 0 1 4.00 4 2 1 0 1
............................................................AAGCCGACCAAAACCGATGCCC......................................................................................................................................................................... 22 0 1 4.00 4 3 0 0 1
...........................................................................................................ACGGGGTTGGTCGGGGTCGGTT.......................................................................................................................... 22 0 1 2.00 2 0 1 0 1
............................................................................................................CGGGGTTGGTCGGGGTCGGTT.......................................................................................................................... 21 0 1 2.00 2 1 0 1 0
........................................................................................CAGTCGGCAGAAGCCAGGCACGG............................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
.............................................................................................................GGGGTTGGTCGGGGTCGGTTA......................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..................................................................................GAAAGACAGTCGGCAGAA....................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0
................ACCTTTGTTTAGCGGCTTTGC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1
............................CGGCTTTGCGAGCCACACG............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
............................................................TAGCCGACCAAAACCGATGCCC......................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................TGCGAGCCACACGGACCATTC.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................TGCCCGAAAGACAGTCGGCAGAA....................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.............................................................................................................TGGGTTGGTCGGGGTCGGTT.......................................................................................................................... 20 1 1 1.00 1 0 0 1 0
............................................................................................................CGGGCTTGGTCGGGGTCGGTT.......................................................................................................................... 21 1 1 1.00 1 1 0 0 0
.........................................................................................................GCACGGGGTTGGTCGGGGT............................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...........................................................TAAGCCGACAAAAACCGATGCCC......................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0
............................................................................................................CGGGGTTGGTCAGGGTCGGTT.......................................................................................................................... 21 1 1 1.00 1 0 1 0 0
..............................................................................................................GGGTTGGTCGGGGTCGGTT.......................................................................................................................... 19 0 1 1.00 1 0 0 0 1
..............................................................GCCGACCAAAACCGATGCCC......................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
.............................GGCTTTGCGAGCCACACGGACC........................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
.........................................................................................................AAACGGGGTTGGTCGGGGTCGGTT.......................................................................................................................... 24 2 1 1.00 1 0 1 0 0
...........TCTGGACTTTTGTATAGCG............................................................................................................................................................................................................................. 19 2 2 0.50 1 0 1 0 0
.....................................................................................TGACAGTCGGCAGGAGCCA................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0
......................................................................................................ATGGCACGGGGTTGGTCGGG................................................................................................................................. 20 2 2 0.50 1 0 1 0 0
...........TCTGGACTGTTGTATAGCG............................................................................................................................................................................................................................. 19 3 12 0.08 1 0 1 0 0
...............................................................................................................GGTGGGTCGGGTTCGGTTTA........................................................................................................................ 20 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_1:216606-216856 + dse_602 GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGCTT---------TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGTGC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGGG-----------CGGGGCAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
droSim2 2r:3414592-3414849 + dsi_10173 GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGCTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGCGC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGGG-----------CGGGGCAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
dm3 chr2R:2550213-2550469 + GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGTGC----------------G--GGC--GCAGG--------------TC------------------------GAA-----G-GGG-----------CGGGACAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
droEre2 scaffold_4929:19995041-19995292 - GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTG-CCGTCTTCGGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTAC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGAG-----------CGGGACAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
droYak3 2L:15295143-15295394 + GCGCAAGGCTCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTG-CCGTCTTCGGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTAC----------------G--GCA--GCGGG--------------TT------------------------GCA-----GGGAG-----------CGGGATAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAAT
droEug1 scf7180000409462:3423823-3424077 + GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGTTGGTTTTTGG-------------------------------CT-ACGGGTTTCCAGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTT-CAGTCGCCAGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTA------------------AGGGGA-G---------------------------------------------CAGA-----GTGTGAGGGACGGGACGGACGAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGGGAAAT
droBia1 scf7180000302292:3600940-3601204 - GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGGC-------------------------T-TCGCT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------T--------CTCCAGTCCGTGCCCCAGC-------CAGC-CAATTGATTA-ATTCTCCG------------------AGGGC------------CGGAGCGGGCCGGGGACGGGCAGAGAAGAG---------------AGG-----------CGAGACAAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGTGAAAT
droTak1 scf7180000413887:52727-53007 - GCGCAAGGCCCAGACCTGGAAACAAATTGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----AGCTGGTTTTTGGC-------------------------TTTTGCT-ACGGGTTTTCTGCTT--TCTG-----------TCTGCTGTCTGCCGTCTTCAGCCTG--------------------------TAGTCTCT-C---------------------------------------------------------------------------CAGTCTTCAGTCCGTGCCCCAAC------------CAATTGATTA-ATTCTGTCC----------------G--AGG--GCGGG--------------A--------------------------CGGG---G-CAG-----------AGGGACGAGT-CGGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGGCAAAT
droEle1 scf7180000491217:467737-467966 - GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTTTTGG-------------------------------CT-ACGGGTTTTCAGCTT--TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAAC-------CAGT-CAATTGATTA-ATTCTCTA------------------AGGGGG-A---------------------------------------------CAGG-----GAGCGA---------AAGACG--A-AAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTGTGAAAT
droRho1 scf7180000766409:436052-436289 + GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTTTTGG-------------------------------CT-ACGGGTTTTTAGCTT--TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTT------------------AGGGGG-A---------------------------------------------CAGG-----GAGTGA---------AAGACAAGT-CCGT------CGACGACGACAGAA----------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGTGAAAT
droFic1 scf7180000453955:756318-756552 - GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGAGTTTTCTG-------------------------------------------------------------------------------------------------------------------------------TT-----------------------CAG----CTTTCTGTCCGTGCCCCAAC-------AAGC-CAATTGATTA-ATTCTGTA------------------AGGGG--GCTGA------------------------------------------------GCGGG-----------AGGGACGAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGACTATTGTGAAAC
droKik1 scf7180000302470:115514-115780 + GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GTCTGGTTT-TGG-------------------------------CT-ACGGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAACAA----C-AGC-CAATTGATTA-ATTCTGTA------------------AAGGGGGC---------------------------------------------C-----------------------------AGA-GAGT------CGACGACGGCAGTGGCCGAGACTGAGGCCGTGGCGGAGGCGGT-----------------------GGCAG--AGGCAGAGGCAGCA----------AGTGTACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTGGGAAAG
droAna3 scaffold_13266:18464282-18464358 - GCGCAAGGCCCAGACCTGGAAGCAGATTGCCGAAACGCTCGGAGTACCAGGTAAGTGAAATTC-----GGCTATCTC-TGG-------------------------------CT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394114:19822-20027 - GCGCAAGGCACAGACCTGGAAGCAGATTGCCGAAACGCTCGGTGTACCTGGTAAGTGAAATTC-----GGCTGACTC-TGG-------------------------------CTCGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACAA----C-AAG-CAATTGATTG-CTTGTAAAA----------------G--GGG--C-------------------C---------------ACAG------T--AGAGTGGAGCCA--------T-CGGAGAGTGCCGT------CGACGACGACAGTGGCTGAGAC------------AGAGGCTGA-----------------------GGCGG--CGGC------------------------------------------------------T----GAGACGGA------------------GGCGGT
dp5 3:813146-813491 + dps_922 CCGCAAAGCCCAGACATGGAAACAAATCGCCGAAACACTCGGAGTGCCTGGTAAGTGAAATTC-----GT-----TC-CG----------------------------------------------ACTTGGTCCGACTCGACTCCC-------------------AGCGCAGTCCGGGTCCAGGTCGGTCTGCTCTGGGGTATATCTCAGTAGATATAGTATGTGGCA---------------------------G------------AGAC-------GTCGCG------ACTGGTGCCCCAACAA----CAA-CCAAATTGATTA-ATTCTGCA------------------GGAGGGGC-------------------G------------------------ACAGA-----GGGT----------------GAGC-TAGC------CGACGACGACAGTGGCTGAGAC------------GGTGGCGGT-----------------------GGCAG--AGGCAGCAAAAGCAAGCAAGTGTAAGTGTACAGAAAACGACGCAAAAGTGAACGGCGAG----GCGACAGAG----------ACGGTTGAGAAAT
droPer2 scaffold_2:988982-989327 + CCGCAAAGCCCAGACATGGAAACAAATCGCCGAAACACTCGGAGTGCCTGGTAAGTGAAATTC-----GT-----TC-CG----------------------------------------------ACTTGGTCCGACTCGACTCCC-------------------AGCGCAGTCCGGGTCCAGGTCGGTCTGCTCTGGGGTATATCTCAGTAGATATAGTATGTGGCA---------------------------G------------AGAC-------GTCGCG------ACTGGTGCCCCAACAA----CAA-CCAAATTGATTA-ATTCTGCA------------------GGAGGGGC-------------------G------------------------ACAGA-----GGGT----------------GAGC-TAGC------CGACGACGACAGTGGCTGAGAC------------GGTGGCGGT-----------------------GGCAG--AGGCAGCAAAAGCAAGCAAGTGTAAGTGTACAGAAAACGACGCAAAAGTGAACGGCGAG----GCGACAGAG----------ACGGTTGAGAAAT
droWil2 scf2_1100000004954:2045901-2046058 - AAGGAAGGCCCAGACATGGAAGCAAATAGCCGAAACACTTGGTGTGCCTGGTAAGTTAAATGGTCTCTGTCTGGTTATTGG-------------------------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGATTA-ATTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAAACGACGCAAAAGTAAACTGCGACAGCGACGACGCAGTAGC--------GGTTGTGAAAT
droVir3 scaffold_12875:15432424-15432612 + GCGTAAGGCGCAGACCTGGAAGCAAATTGCCGAAACACTCGGCGTTAGCGGTAAGTGAAATTT-----TTG-------ATG-------------------------------GA-ACTGTTTGTTTGTAA--TCAT-----------CTTGTCGAAACGGGTCCGAAGCGAA--------------------------GGGTGCAA-CCAGCCCATAAGCTGTGTGGCAAGTGAAATTGGTT---GGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGAGG-CAGC------TGGCGACGACG-------------------------------------------------------------------------------------------A-----------------------------------------------------------------
droMoj3 scaffold_6496:8364596-8364983 - GCGTAAGGCGCAGACTTGGAAGCAAATCGCTGAAACACTTGGAGTTAGCGGTAAGTGAAATTT-----TAG---TGT-TG------------------------------TGAA-ACGGGTGTCCG--------------------------------------------AA--------------------------GGGTGCAA-CCAGCCCATAAGCTGTGTGGCAAGTGAAATTG-------AGTATTGGCCGCGGAGGCAACTAAGGCAGCTGGC-G-CCGTCGTCG-------TC----------GC-AGC-AAATTGATTAAATTCTGTGTTCGTACACAAGAGAAGA--GGC--A--GAGAGGGTGGAACGGGTGCAGAATGGGCTGGCAACAGAGGCGACATA-----CGAC----------------GACA-TCGT------CGACAGCGACAGCGGG--------------------CGTCGGC-----------------------AGCAGGCGGGCAGCAAAAGCA----------AGTGTACAGA-AACGACGCAAAAGTGAACGGCGAC----GCGACGGAGACGC-GACAGTCGGTTGTGAAAT
droGri2 scaffold_15245:12234336-12234697 + GCGCAAAGCACAAACCTGGAAGCAAATCGCCGAAACCCTCGGCGTCAGTGGTAAGTGAAATTT-----GT--------TGGCCAAATTCAGAAAAATTCACTCAATGTTGCA---------------------------------------------------------------------------------------------------------------GCAGCAAGTGAAATTGGTTAGTGGGTATCAGTCG------------AG-------ACGA-GGGTCTGCTGTCGCTG-------------C-AGC-AAATTGATTA-ATTCTAAGT----------------A--GGC--A--GAGGGG-C-----------AGAGCAGGCTAGCAACAG------T--GAGA--CGGC----------------GACA-TCGTTCGTCGCGGCAGCA---GT---------------AGTAG---CAGCGGTGGAAGGCTGCAGCGGGCGTCGGCAGCAGGCGGGCAGCAAAAGCA----------AGTGTACAGA-AACGACGCAAAAGTGAACGGCGAC----GCAACGGAGACGC-GACAGACGATTGTGAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGCTT---------TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGTGC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGGG-----------CGGGGCAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................AAACGCTCGGTGTGCCTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.............................................................................................................................................................................................................................................................................................................................................................................GG--------------TC------------------------GCA-----GGGGG-----------CGGGGC.......................................................................................................................................................................................1811.0010001
.................................AACGCTCGGTGTGCCTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010010
droSim2
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGCTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGCGC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGGG-----------CGGGGCAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................TTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGT.............................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.............ACCTGGAAACAAATCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.................GGAAACAAATCGCCGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
................................AAACGCTCGGTGTGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................ATTGATTA-ATTCTGCGC----------------G--GGC--GCG...............................................................................................................................................................................................................................................................2411.00101000000000000000
.....................................................AGTGAAATTC-----GGCTGGTTT-TG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................TGGAAACAAATCGCCGAAACGCTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
dm3
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGTGCCCCAACCAGCCCC-AGC-CAATTGATTA-ATTCTGTGC----------------G--GGC--GCAGG--------------TC------------------------GAA-----G-GGG-----------CGGGACAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................ATTC-----GGCTGGTTT-TGG-------------------------------CT-ACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................C-----GGCTGGTTT-TGG-------------------------------CT-ACGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GAAACGCTCGGTGTGCCTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGAAATTC-----GGCTGGTTT-TG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000
......................................................GTGAAATTC-----GGCTGGTTT-TGG-------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACAAATCGCCGAAACGCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC----GCGGCGCAGTAGCTGGCTGATGGT........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000
..........................................................................................................................TTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTC............................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................TGAAATTC-----GGCTGGTTT-TGG-------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGT......................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACGACGCAAAAGTGAAC..........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGT..................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCA...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGAAACAAATCGCCGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGAAACAAATCGCCGAAACGCTCGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGCAAGGCCCAGACCTGGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................T-TGG-------------------------------CT-ACGGGTTTTCTGCTT--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAC----GCGGCGCAGTAGCTGGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AACGCTCGGTGTGCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGTGCCTGGTAAGTGAAATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AACAAATCGCCGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CGTCTTCGGTCCGTGCCCCAC...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................GAAACGCTCGGTGTGCCTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............CTGGAAACAAATCGCCGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................GAAACGCTCGGTGTGCCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGCTCGGTGTGCCTGGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........CAGACCTGGAAACAAATCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................C----------------G--GGC--GCAGG--------------TC------------------------GAA-----G-GGG-----------C............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGAAATTC-----GGCTGGTTT-TGG-------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGGTAAGTGAAATTC-----GGCTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............CCTGGAAACAAATCGCCGAAACGCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TCAG-CCGTCTTCGGTCCGTGC................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CAG-CCGTCTTCGGTCCGTGCCC..............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAAAAGTGAACGGCGAC----G...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAAGGCCCAGACCTGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCGAC----GCGGCGCAGTAG....................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGG.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCGCCGAAACGCTCGGTGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTGAAATTC-----GGCTGGTTT-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TC....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAGTGAACGGCGAC----G...............................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAACGGCGAC----GCGGCGCAGTA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................CGCCGAAACGCTCGGTGTGCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCCAGACCTGGAAACAAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................ATCGCCGAAACGCTCGGTGTGCCTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCTGGTTT-TGG-------------------------------CT-ACGGGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCCAGACCTGGAAACAAATCGCCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................TTC-----GGCTGGTTT-TGG-------------------------------CT-ACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................CGTCTTCGGTCCGTGCCCCAA...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAA................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGCCGAAACGCTCGGTGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTC-----GGCTGGTTT-TGG-------------------------------CT-ACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCCAGACCTGGAAACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACCTGGAAACAAATCGCCGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.CGCAAGGCCCAGACCTGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTGGCTGATGGTTAGGA...2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAAACAAATCGCCGAAACGCTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGCAGTAGCTGGCTGATGGT........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAACGCTCGGTGTGCCTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........CCAGACCTGGAAACAAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AG-CCGTCTTCGGTCCGTGCCC..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTGATTA-ATTCTGTGC----------------G--GGC--G.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................G----------------------------------------------------------------------------------------------------------------------------------------------TCAG-CCGTCTTCGGTCCGTG.................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACAAATCGCCGAAACGCTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GCCTGGTAAGTGAAATTC-----G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......GCCCAGACCTGGAAACAAATCGCCGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................AAACAAATCGCCGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AG-CCGTCTTCGGTCCGTGCC...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTGAAATTC-----GGCTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................CCTGGTAAGTGAAATTC-----GGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAGGCCCAGACCTGGAAACAAATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GTGTGCCTGGTAAGTGAAATTC-----GGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTG-CCGTCTTCGGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTAC----------------G--GGC--GCGGG--------------TC------------------------GCA-----GGGAG-----------CGGGACAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------..................................................................2111.0011000000
droYak3
GCGCAAGGCTCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTG-CCGTCTTCGGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTAC----------------G--GCA--GCGGG--------------TT------------------------GCA-----GGGAG-----------CGGGATAAGT-CAGT------CGACGACGACG-------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTAGGAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTAGCTGGCTGATGGTTAGGA...2311.00100000010000
.................................................................................................................................................................................................................................................................................................TCGGTCCGTGCCCCAAC-------CAGC-C.............................................................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGTTGGTTTTTGG-------------------------------CT-ACGGGTTTCCAGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------TCTT-CAGTCGCCAGTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTA------------------AGGGGA-G---------------------------------------------CAGA-----GTGTGAGGGACGGGACGGACGAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGGGAAATSizeHit CountTotal NormTotal
No Reads
droBia1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGGC-------------------------T-TCGCT-ACGGGTTTTCTGCTT--TCTG----------------------------------------------------------------------------------------------------------------------------------------------T--------CTCCAGTCCGTGCCCCAGC-------CAGC-CAATTGATTA-ATTCTCCG------------------AGGGC------------CGGAGCGGGCCGGGGACGGGCAGAGAAGAG---------------AGG-----------CGAGACAAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGTGAAATSizeHit CountTotal NormTotal
No Reads
droTak1
GCGCAAGGCCCAGACCTGGAAACAAATTGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----AGCTGGTTTTTGGC-------------------------TTTTGCT-ACGGGTTTTCTGCTT--TCTG-----------TCTGCTGTCTGCCGTCTTCAGCCTG--------------------------TAGTCTCT-C---------------------------------------------------------------------------CAGTCTTCAGTCCGTGCCCCAAC------------CAATTGATTA-ATTCTGTCC----------------G--AGG--GCGGG--------------A--------------------------CGGG---G-CAG-----------AGGGACGAGT-CGGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGGCAAATSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTTTTGG-------------------------------CT-ACGGGTTTTCAGCTT--TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAAC-------CAGT-CAATTGATTA-ATTCTCTA------------------AGGGGG-A---------------------------------------------CAGG-----GAGCGA---------AAGACG--A-AAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTGTGAAATSizeHit CountTotal NormTotal
No Reads
droRho1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACTCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTTTTGG-------------------------------CT-ACGGGTTTTTAGCTT--TCT-------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAAC-------CAGC-CAATTGATTA-ATTCTGTT------------------AGGGGG-A---------------------------------------------CAGG-----GAGTGA---------AAGACAAGT-CCGT------CGACGACGACAGAA----------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGATGGTTGTGAAATSizeHit CountTotal NormTotal
No Reads
droFic1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GGCTGGTTT-TGG-------------------------------CT-ACGAGTTTTCTG-------------------------------------------------------------------------------------------------------------------------------TT-----------------------CAG----CTTTCTGTCCGTGCCCCAAC-------AAGC-CAATTGATTA-ATTCTGTA------------------AGGGG--GCTGA------------------------------------------------GCGGG-----------AGGGACGAGT-CAGT------CGACGACG----------------------------------------------------------------------------------------------ACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGACGCAGTAGCTGGCTGACTATTGTGAAACSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCAAGGCCCAGACCTGGAAACAAATCGCCGAAACGCTCGGTGTGCCTGGTAAGTGAAATTC-----GTCTGGTTT-TGG-------------------------------CT-ACGGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCGTGCCCCAACAA----C-AGC-CAATTGATTA-ATTCTGTA------------------AAGGGGGC---------------------------------------------C-----------------------------AGA-GAGT------CGACGACGGCAGTGGCCGAGACTGAGGCCGTGGCGGAGGCGGT-----------------------GGCAG--AGGCAGAGGCAGCA----------AGTGTACAGAAAACGACGCAAAAGTGAACGGCGAC----GCGGCGCAGTAGCTGGCTGATGGTTGGGAAAGSizeHit CountTotal NormTotal
No Reads
droAna3
GCGCAAGGCCCAGACCTGGAAGCAGATTGCCGAAACGCTCGGAGTACCAGGTAAGTGAAATTC-----GGCTATCTC-TGG-------------------------------CT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................AGCAGATTGCCGAAACGCTCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
GCGCAAGGCACAGACCTGGAAGCAGATTGCCGAAACGCTCGGTGTACCTGGTAAGTGAAATTC-----GGCTGACTC-TGG-------------------------------CTCGCGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACAA----C-AAG-CAATTGATTG-CTTGTAAAA----------------G--GGG--C-------------------C---------------ACAG------T--AGAGTGGAGCCA--------T-CGGAGAGTGCCGT------CGACGACGACAGTGGCTGAGAC------------AGAGGCTGA-----------------------GGCGG--CGGC------------------------------------------------------T----GAGACGGA------------------GGCGGTSizeHit CountTotal NormTotal
No Reads
dp5
CCGCAAAGCCCAGACATGGAAACAAATCGCCGAAACACTCGGAGTGCCTGGTAAGTGAAATTC-----GT-----TC-CG----------------------------------------------ACTTGGTCCGACTCGACTCCC-------------------AGCGCAGTCCGGGTCCAGGTCGGTCTGCTCTGGGGTATATCTCAGTAGATATAGTATGTGGCA---------------------------G------------AGAC-------GTCGCG------ACTGGTGCCCCAACAA----CAA-CCAAATTGATTA-ATTCTGCA------------------GGAGGGGC-------------------G------------------------ACAGA-----GGGT----------------GAGC-TAGC------CGACGACGACAGTGGCTGAGAC------------GGTGGCGGT-----------------------GGCAG--AGGCAGCAAAAGCAAGCAAGTGTAAGTGTACAGAAAACGACGCAAAAGTGAACGGCGAG----GCGACAGAG----------ACGGTTGAGAAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................A---------------------------G------------AGAC-------GTCGCG------ACTGGTGCC...............................................................................................................................................................................................................................................................................................................................2111.0010000000010
.......................AAATCGCCGAAACACTCGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................TCCC-------------------AGCGCAGTCCGGGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................TGATTA-ATTCTGCA------------------GGAGGG...................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................TAGATATAGTATGTGGCA---------------------------G------------AG.............................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
...............................................CTGGTAAGTGAAATTC-----GT-----TC-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGACAGTGGCTGAGAC------------GG....................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................CTGCA------------------GGAGGGGC-------------------G------------------------ACAGA-----GGGT----------------.......................................................................................................................................................................................2311.0010010000000
...............................GAAACACTCGGAGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
........................................................GAAATTC-----GT-----TC-CG----------------------------------------------ACTTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................GCA---------------------------G------------AGAC-------GTCGCG------ACTGGTG.................................................................................................................................................................................................................................................................................................................................2111.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCGAG----GCGACAGAG----------ACGG.........2111.0010100000000
..............................................................C-----GT-----TC-CG----------------------------------------------ACTTGGTCCGACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................ACTCGACTCCC-------------------AGCGCAGTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
...................................................................................................................................................................................................................................CA---------------------------G------------AGAC-------GTCGCG------ACTGGTGC................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.....................................................................................................................................................................................................................................................................................................................................TTA-ATTCTGCA------------------GGAGGGGC-------------------..............................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAG----GCGACAGAG----------ACGGTTG......2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGAC------------GGTGGCGGT-----------------------GG....................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGGCTGAGAC------------GGTGGCGT..............................................................................................................................2211.0010100000000
............................GCCGAAACACTCGGAGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAG----GCGACAGAG----------ACGGTTG......2111.0010100000000
....................................................................................................................................................................................................................................A---------------------------G------------AGAC-------GTCGCG------ACTGGTGC................................................................................................................................................................................................................................................................................................................................2011.0010000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................GT----------------GAGC-TAGC------CGACGACGA...............................................................................................................................................................1911.0010100000000
.................................AACACTCGGAGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510010000000
droPer2
CCGCAAAGCCCAGACATGGAAACAAATCGCCGAAACACTCGGAGTGCCTGGTAAGTGAAATTC-----GT-----TC-CG----------------------------------------------ACTTGGTCCGACTCGACTCCC-------------------AGCGCAGTCCGGGTCCAGGTCGGTCTGCTCTGGGGTATATCTCAGTAGATATAGTATGTGGCA---------------------------G------------AGAC-------GTCGCG------ACTGGTGCCCCAACAA----CAA-CCAAATTGATTA-ATTCTGCA------------------GGAGGGGC-------------------G------------------------ACAGA-----GGGT----------------GAGC-TAGC------CGACGACGACAGTGGCTGAGAC------------GGTGGCGGT-----------------------GGCAG--AGGCAGCAAAAGCAAGCAAGTGTAAGTGTACAGAAAACGACGCAAAAGTGAACGGCGAG----GCGACAGAG----------ACGGTTGAGAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................CTTGGTCCGACTCGACTCCC-------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.............................................................................................................................................................................................................................................................................AGAC-------GTCGCG------ACTGGTGCCC..............................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................GT-----TC-CG----------------------------------------------ACTTGGTCCGACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................CTTGGTCCGACTCGACTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................CCAGGTCGGTCTGCTCTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.CGCAAAGCCCAGACATGGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................TTA-ATTCTGCA------------------GGAGGGGC-------------------G------------------------A....................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGAACGGCGAG----GCGA............................2011.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................G------------------------ACAGA-----GGGT----------------GAGC-TAGC------CGT.....................................................................................................................................................................2111.001000001
.................................AACACTCGGAGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
droWil2
AAGGAAGGCCCAGACATGGAAGCAAATAGCCGAAACACTTGGTGTGCCTGGTAAGTTAAATGGTCTCTGTCTGGTTATTGG-------------------------------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGATTA-ATTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAAACGACGCAAAAGTAAACTGCGACAGCGACGACGCAGTAGC--------GGTTGTGAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTGCGACAGCGACGACG..........................2111.00100010
...........................AGCCGAAACACTTGGTGTGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
droVir3
GCGTAAGGCGCAGACCTGGAAGCAAATTGCCGAAACACTCGGCGTTAGCGGTAAGTGAAATTT-----TTG-------ATG-------------------------------GA-ACTGTTTGTTTGTAA--TCAT-----------CTTGTCGAAACGGGTCCGAAGCGAA--------------------------GGGTGCAA-CCAGCCCATAAGCTGTGTGGCAAGTGAAATTGGTT---GGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGAGG-CAGC------TGGCGACGACG-------------------------------------------------------------------------------------------A-----------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................T-----TTG-------ATG-------------------------------GA-ACTGTTTGTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000000100000000000000010000000000000000100000000000000000000000
............................................................TTT-----TTG-------ATG-------------------------------GA-ACTGTTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000100000000000000000000000010000000000000000000000000000000
...........................................................ATTT-----TTG-------ATG-------------------------------GA-ACTGTTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000200000000000000000000000000000000000000000000000000000000
..............................................................................ATG-------------------------------GA-ACTGTTTGTTTGTAA--T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................GCAAATTGCCGAAACACTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................CGAAACGGGTCCGAAGCGAA--------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
..............................................................................ATG-------------------------------GA-ACTGTTTGTTTGTAA--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
.......GCGCAGACCTGGAAGCAAATTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000100000000000000000000000000000000000
............................................TTAGCGGTAAGTGAAATTT-----TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
....................................ACTCGGCGTTAGCGGTAAGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GGTT---GGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCGAGG-CA................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................AGCGAA--------------------------GGGTGCAA-CCAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
...........................................................ATTT-----TTG-------ATG-------------------------------GA-ACTGTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
............................................................TTT-----TTG-------ATG-------------------------------GA-ACTGTTTGTTTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................TAA--TCAT-----------CTTGTCGAAACGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
...TAAGGCGCAGACCTGGAAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
GCGTAAGGCGCAGACTTGGAAGCAAATCGCTGAAACACTTGGAGTTAGCGGTAAGTGAAATTT-----TAG---TGT-TG------------------------------TGAA-ACGGGTGTCCG--------------------------------------------AA--------------------------GGGTGCAA-CCAGCCCATAAGCTGTGTGGCAAGTGAAATTG-------AGTATTGGCCGCGGAGGCAACTAAGGCAGCTGGC-G-CCGTCGTCG-------TC----------GC-AGC-AAATTGATTAAATTCTGTGTTCGTACACAAGAGAAGA--GGC--A--GAGAGGGTGGAACGGGTGCAGAATGGGCTGGCAACAGAGGCGACATA-----CGAC----------------GACA-TCGT------CGACAGCGACAGCGGG--------------------CGTCGGC-----------------------AGCAGGCGGGCAGCAAAAGCA----------AGTGTACAGA-AACGACGCAAAAGTGAACGGCGAC----GCGACGGAGACGC-GACAGTCGGTTGTGAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..GTAAGGCGCAGACTTGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................ATTG-------AGTATTGGCCGCGGAG......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
GCGTAAGGCGCAGACTTGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................AAATTT-----TAG---TGT-TG------------------------------TGAA-ACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................GCTGAAACACTTGGAGTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droGri2
GCGCAAAGCACAAACCTGGAAGCAAATCGCCGAAACCCTCGGCGTCAGTGGTAAGTGAAATTT-----GT--------TGGCCAAATTCAGAAAAATTCACTCAATGTTGCA---------------------------------------------------------------------------------------------------------------GCAGCAAGTGAAATTGGTTAGTGGGTATCAGTCG------------AG-------ACGA-GGGTCTGCTGTCGCTG-------------C-AGC-AAATTGATTA-ATTCTAAGT----------------A--GGC--A--GAGGGG-C-----------AGAGCAGGCTAGCAACAG------T--GAGA--CGGC----------------GACA-TCGTTCGTCGCGGCAGCA---GT---------------AGTAG---CAGCGGTGGAAGGCTGCAGCGGGCGTCGGCAGCAGGCGGGCAGCAAAAGCA----------AGTGTACAGA-AACGACGCAAAAGTGAACGGCGAC----GCAACGGAGACGC-GACAGACGATTGTGAAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:21 PM