ID:

dse_60

 Coordinate:

scaffold_0:20818719-20818774 +

 Confidence:

Known Ortholog

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -18.3

Flybase annnotation

intron [Dsec\GM26616-in]; utr5 [utr5_plus_12030]; CDS [Dsec\GM26616-cds]; CDS [Dsec\GM26616-cds]; utr3 [utr3_plus_6707]; utr3 [utr3_plus_6706]

No Repeatable elements found

Sense Strand Reads

CAGGAGCGCGAGGATGAGATGCGAGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATCTGGATGTGGTTGGCTCTGGCGGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCT

**************************************************((((((((.(((((((((..((((.....)).))..))))))))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V115

head

 V113

male body
....................................................................................TCTCACATTTACATATTCACAG.................................................. 22 0 1 1542.00 1542 1440 51 46 5
....................................................................................TCTCACATTTACATATTCACA................................................... 21 0 1 544.00 544 435 24 73 12
..................................................GTGGGTATCTGGATGTGGTTGG.................................................................................... 22 0 1 234.00 234 15 133 41 45
....................................................................................TCTCACATTTACATATTCACAGT................................................. 23 1 1 169.00 169 97 39 20 13
.....................................................................................CTCACATTTACATATTCACAG.................................................. 21 0 1 110.00 110 109 1 0 0
....................................................................................TCTCACATTTACATATTCAC.................................................... 20 0 1 74.00 74 67 0 7 0
..................................................GTGGGTATCTGGATGTGGTTG..................................................................................... 21 0 1 62.00 62 6 23 13 20
....................................................................................TCTCACATTTACATATTCACAGA................................................. 23 1 1 41.00 41 36 0 5 0
.....................................................................................CTCACATTTACATATTCACA................................................... 20 0 1 35.00 35 34 0 1 0
.....................................................................................CTCACATTTACATATTCACAGT................................................. 22 1 1 30.00 30 19 5 3 3
....................................................................................TCTCACATTTACATATTCACAC.................................................. 22 1 1 21.00 21 21 0 0 0
....................................................................................TCTCACATTTACATATTCA..................................................... 19 0 1 16.00 16 2 0 14 0
....................................................................................TCTAACATTTACATATTCACAG.................................................. 22 1 1 11.00 11 11 0 0 0
....................................................................................TCTCACATTTACATATTCACAGC................................................. 23 1 1 9.00 9 9 0 0 0
....................................................................................TCTCACCTTTACATATTCACA................................................... 21 1 1 7.00 7 7 0 0 0
......................................................................................TCACATTTACATATTCACAG.................................................. 20 0 1 7.00 7 7 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGGA................................................................................... 23 1 1 6.00 6 1 0 1 4
..................................................GTGGGTATCTGGATGTGGTTGGT................................................................................... 23 1 1 6.00 6 0 4 0 2
....................................................................................TCTCACATCTCTATATTCACAG.................................................. 22 3 1 6.00 6 6 0 0 0
....................................................................................TCTCACATTTACATATTCACGG.................................................. 22 1 1 5.00 5 5 0 0 0
....................................................................................TCTCACCTTTACATATTCACAG.................................................. 22 1 1 5.00 5 5 0 0 0
....................................................................................TCTAACATTTACATATTCACA................................................... 21 1 1 5.00 5 5 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGGC................................................................................... 23 0 1 5.00 5 0 1 2 2
....................................................................................TCTCACATTTACATATTCACG................................................... 21 1 1 4.00 4 3 1 0 0
.....................................................................................CTCACATTTACATATTCACAGA................................................. 22 1 1 4.00 4 3 0 0 1
....................................................................................TCTCACATTTACATATTCACAT.................................................. 22 1 1 4.00 4 4 0 0 0
....................................................................................TCTCACATTTATATATTCACAG.................................................. 22 1 1 4.00 4 4 0 0 0
........................................................................................ACATTTACATATTCACAG.................................................. 18 0 1 4.00 4 4 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGT.................................................................................... 22 1 1 3.00 3 0 1 0 2
....................................................................................ACTCACATTTACATATTCACAG.................................................. 22 1 1 3.00 3 2 0 1 0
..................................................GTGGGTATCTGGATGTGGTT...................................................................................... 20 0 1 3.00 3 0 1 1 1
....................................................................................TCTCACATTTACATATTCACAA.................................................. 22 1 1 3.00 3 3 0 0 0
..................................................GTGGGTATCTGGATGTGG........................................................................................ 18 0 1 3.00 3 0 1 2 0
....................................................................................TCTCACACTTACATATTCACA................................................... 21 1 1 3.00 3 3 0 0 0
.....................................................................................CTCACATTTACATATTCACAGTT................................................ 23 2 1 3.00 3 2 0 1 0
....................................................................................TCTCACATTTACATATTCACAGCA................................................ 24 2 1 3.00 3 1 0 2 0
....................................................................................TCTCACCTTTACATATTCACAGT................................................. 23 2 1 3.00 3 3 0 0 0
....................................................................................TCTCATATTTACATATTCACAG.................................................. 22 1 1 3.00 3 3 0 0 0
...................................................................................CTCTCACATTTACATATTCACAG.................................................. 23 0 1 3.00 3 3 0 0 0
.....................................................................................CTCACATTTACATATTCAC.................................................... 19 0 1 3.00 3 3 0 0 0
....................................................................................TCTCACATTTACACATTCACA................................................... 21 1 1 3.00 3 2 1 0 0
..................................................TTGGGTATCTGGATGTGGTTGG.................................................................................... 22 1 1 2.00 2 0 1 1 0
....................................................................................TCTAACATTTACATATTAACAG.................................................. 22 2 1 2.00 2 2 0 0 0
...................................................TGGGTATCTGGATGTGGTTGGT................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................................................TCTCACATTTACATATTAACAG.................................................. 22 1 1 2.00 2 2 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGA.................................................................................... 22 1 1 2.00 2 0 0 1 1
......................................................................................TCACATTTACATATTCACAGT................................................. 21 1 1 2.00 2 1 1 0 0
....................................................................................TGTCACATTTACATATTCACAG.................................................. 22 1 1 2.00 2 2 0 0 0
....................................................................................CCTCACATTTACATATTCACAG.................................................. 22 1 1 2.00 2 2 0 0 0
....................................................................................TCTCACATTTACATATTCACAGTT................................................ 24 2 1 2.00 2 1 0 1 0
....................................................................................TCTCACATTTACGTATTCACAG.................................................. 22 1 1 2.00 2 2 0 0 0
.......................................................................................CACATTTACATATTCACA................................................... 18 0 1 2.00 2 2 0 0 0
....................................................................................TCTCACATTTACATATTAACA................................................... 21 1 1 2.00 2 2 0 0 0
....................................................GGGTATCTGGATGTGGTTGG.................................................................................... 20 0 1 2.00 2 1 0 1 0
....................................................................................TCTCACATCTCTATATTCACA................................................... 21 3 4 1.50 6 3 0 3 0
.............................................................GATGTGATTGGTTCAGGCGGT.......................................................................... 21 3 1 1.00 1 0 0 0 1
....................................................................................TCTCACATTTACATATTCACAGG................................................. 23 0 1 1.00 1 1 0 0 0
.....................................................................................................AGAAGGCGCCGTGAGCTGCGTCAC............................... 24 3 1 1.00 1 0 1 0 0
....................................................................................TCTCACATTTACATATTCACATT................................................. 23 2 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACAGATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
...................................................................................TTCTCACATTTACATATTCACAG.................................................. 23 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGCGGTTGGTA.................................................................................. 24 3 1 1.00 1 0 1 0 0
....................................................................................TCTCGCATTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGCTG..................................................................................... 21 1 1 1.00 1 0 0 0 1
....................................................................................TTTCACATTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
....................................................................................ACTCACATTTACATATTCACAGA................................................. 23 2 1 1.00 1 1 0 0 0
...................................................TGGGTATCTGGATGTGGTTGG.................................................................................... 21 0 1 1.00 1 0 0 1 0
......................................................................................TCACATTTACATATTCACA................................................... 19 0 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACAAATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
....................................................................................TCGCACATTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
......................................................................................TCTCATTTACATATTCACAG.................................................. 20 1 1 1.00 1 0 1 0 0
....................................................................................TTTCACATTTACATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATATTCGCAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTTG........................................................................................ 18 1 1 1.00 1 0 0 1 0
.....................................................................................CTCACATTTGCATATTCACA................................................... 20 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATATTCACACC................................................. 23 2 1 1.00 1 1 0 0 0
....................................................................................TCTCACTTTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGTAGG.................................................................................... 22 1 1 1.00 1 0 1 0 0
...................................................TGGGTATCTGGATGTGGT....................................................................................... 18 0 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACACATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTAAATATTCACAG.................................................. 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTAACATTTACATATTCAC.................................................... 20 1 1 1.00 1 1 0 0 0
.............................GGCACTGAAGCTGCGCCGAA........................................................................................................... 20 1 1 1.00 1 0 1 0 0
....................................................................................TCTCACACTTACATATTCACAGT................................................. 23 2 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATACTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGCA................................................................................... 23 2 1 1.00 1 0 0 0 1
....................................................................................TCCCACATTTACATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTACATATTCACAC.................................................. 21 1 1 1.00 1 1 0 0 0
..................................................GTGGATATCTGGATGTGGTTGG.................................................................................... 22 1 1 1.00 1 0 1 0 0
..................................................GTGGGTATCTGGATGTGGTTGGTA.................................................................................. 24 2 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACATATTCACACA................................................. 23 2 1 1.00 1 1 0 0 0
...............................................................................CTTTCTCTCACATTTACATATTCACA................................................... 26 3 1 1.00 1 1 0 0 0
....................................................................................TCTCACCTTTACATATTCACAGA................................................. 23 2 1 1.00 1 1 0 0 0
.................................................................................AGGTCTCACATTTACATATTCACAG.................................................. 25 3 1 1.00 1 1 0 0 0
..................................................GTGGGGATCTGGATGTGGTTG..................................................................................... 21 1 1 1.00 1 0 0 0 1
....................................................................................TATCACATTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACAATTACATATTCACAG.................................................. 22 1 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACATATTAACAC.................................................. 22 2 1 1.00 1 1 0 0 0
....................................................................................TCTCCCATTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
....................................................................................TCTAACATTTACATATTCACAA.................................................. 22 2 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACGTATTCACAGT................................................. 23 2 1 1.00 1 0 0 0 1
..................................................GTGGGTATCTGGATGTGGTTT..................................................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTTCATATTCACAG.................................................. 22 1 1 1.00 1 0 1 0 0
..................................................GTGGGTATCTGGATGTGGTTGGAT.................................................................................. 24 1 1 1.00 1 0 1 0 0
.....................................................................................CTCACATTTACATATTTACAG.................................................. 21 1 1 1.00 1 1 0 0 0
......................................................................................TCACATTTACATACTCACAG.................................................. 20 1 1 1.00 1 1 0 0 0
.....................................................................................TTCACATTTACATATTCACAG.................................................. 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATATACACA................................................... 21 1 1 1.00 1 0 0 1 0
..................................................GTGGGTATCTGGATGTGCTTGG.................................................................................... 22 1 1 1.00 1 0 1 0 0
....................................................................................TCTCACATTTACATTTTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGCTGG.................................................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................CTCACATTTACATAATCACAG.................................................. 21 1 1 1.00 1 1 0 0 0
...................................................................................ATCTCACATTTACATATTCACAG.................................................. 23 1 1 1.00 1 1 0 0 0
....................................................................................TCTAACCTTTACATATTCACAG.................................................. 22 2 1 1.00 1 1 0 0 0
.....................................................................................CTCAAATTTACATATTCACAG.................................................. 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATATTCGCAGT................................................. 23 2 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTACATATTCCC.................................................... 19 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATCTACATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTATATATTAACAG.................................................. 22 2 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTACATATTCACAGTAA............................................... 24 3 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTACACATTCACAGT................................................. 22 2 1 1.00 1 1 0 0 0
......................................................................................TCTCATTTACATATTCACA................................................... 19 1 1 1.00 1 0 0 1 0
..................................................GTGGGTATCTGGATGTGGTTTG.................................................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................TTCACATTTACATATTCACAGA................................................. 22 2 1 1.00 1 1 0 0 0
......................................................................................TCACAGTTACATATTCACAG.................................................. 20 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGTTGGCT.................................................................................. 24 0 1 1.00 1 0 0 0 1
....................................................................................TCTCACATTTACATATTCACACT................................................. 23 2 1 1.00 1 1 0 0 0
....................................................................................TCTAACATTTACATATTCACAGA................................................. 23 2 1 1.00 1 1 0 0 0
......................................................................................TCACATTTACATATTCAC.................................................... 18 0 1 1.00 1 1 0 0 0
..................................................................................AGTCTCACATTTACATATTCACAGA................................................. 25 3 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTACATACTCACA................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TGTCACATTTACATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACGTTTACATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTAGATGTGGTTGG.................................................................................... 22 1 1 1.00 1 0 1 0 0
....................................................................................CCTCACATTTACATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................CTCACATTTACATATTCACAGC................................................. 22 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTCACATATTCACAGT................................................. 23 2 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACATATTCACAGAA................................................ 24 2 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTATATATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................CTCGCATTTACATATTCACAG.................................................. 21 1 1 1.00 1 1 0 0 0
..................................................GTGGGTATCTGGATGTGGT....................................................................................... 19 0 1 1.00 1 0 0 1 0
....................................................................................TCTCACATTTACGTATTCACA................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................TCTCACATTTCCATATTCACAG.................................................. 22 1 1 1.00 1 1 0 0 0
..................................................................................CGTCTCACATTTACATATTCACA................................................... 23 1 1 1.00 1 1 0 0 0
..................................................................................GTTCTCACATTTACATATTCACAG.................................................. 24 2 1 1.00 1 1 0 0 0
...................................................GTGGTATCTGGATGTGGTTG..................................................................................... 20 2 2 0.50 1 0 0 1 0
....................................................................................TCTCACATTTACATATTCAGT................................................... 21 2 2 0.50 1 0 1 0 0
....................................................................................TCTGACATTTACATATTCACAC.................................................. 22 2 3 0.33 1 1 0 0 0
....................................................................................TCTCACATTTCCATTTTAACAG.................................................. 22 3 3 0.33 1 1 0 0 0
....................................................................................TCTCACATCTCCATATTCACAGT................................................. 23 3 5 0.20 1 0 0 0 1
....................................................................................TCTCACATCTCTATATTCAC.................................................... 20 3 12 0.17 2 2 0 0 0

Anti-sense strand reads

GTCCTCGCGCTCCTACTCTACGCTCTTGACCGTGACTTCGACGCGTCTTCCACCCATAGACCTACACCAACCGAGACCGCCAGGAGAGTGTAAATGTATAAGTGTCCGCGGCACTCGACGCAGTGTTTATACCTTGCGGGAGCTCACCTTTCGAGA

**************************************************((((((((.(((((((((..((((.....)).))..))))))))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114

embryo
.......TGCTCCTACTCTACGCTT................................................................................................................................... 18 2 13 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:20818669-20818824 + dse_60 confident CAGGAGCGCGAGGATGAGATGCGAGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCT
droSim2 x:5236379-5236534 - dsi-mir-1003 Known_mirbase CAGGAGCGCGAGGATGAGATGCGCGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCAAGTGGAAAGCTCT
dm3 chr3R:20484277-20484432 + dme-mir-1003 Known_mirbase CAGGAACGCGAGGATGAGATGCGCGAACTGGCCCTCAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCT
droEre2 scaffold_4820:7574064-7574219 - der_58 confident CAGGAGCGCGAGGACGAGATGCGTGAACTGGCCCTGAAACTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTACGGAACGCCCTCGAGTGGAAAGCTCT
droYak3 3R:26013167-26013322 - dya_39 confident CAGGAGCGCGAGGACGAGATGCGTGAACTGGCTCTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGTCGTGAGCTGCGACACAAATATGGAACGCCCTCGAGTGGAAAGCTCT
droEug1 scf7180000409881:208805-208960 + CAGGAGCGTGAGGACGAGATGCGTGAGTTGGCTTTGAAGCTGCGCAGGAGGTGGGTATC-TTGATGTGGTTGGCTCCG------G-----C--TGTCCTCTCACATCTGTATATTCACAGGCGTCGTGAGCTGCGTCACAAGTATGGAACGCCCTCAAGCGGCAAGCTGT
droBia1 scf7180000302402:4263746-4263901 + CAGGAACGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGAAGGTGGGTATT-TTGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATCTATATATTCACAGGCGTCGTGAGCTGCGGCACAAATATGGCACGCCCTCCAGCGGCAAGCTCT
droTak1 scf7180000415310:656291-656446 - CAGGAGCGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGGAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATCTACATATTCACAGGCGTCGTGAGCTGCGACACAAATACGGAACGCCCTCGAGCGGCAAGCTTT
droEle1 scf7180000491194:539698-539856 + CAGGAACGTGAGGACGAGATGCGCGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTTGGCTCTT------C-TGG-G--CGTCCTCTCACATCTACATATTCACAGGCGGCGTGAGCTGCGCCACAAGTATGGGACCCCTTCGAGCGGCAAGCTCT
droRho1 scf7180000779488:582408-582563 + CAGGAGCGTGAAGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTCGGCTTTA------G-----C--GGTCCTCTCACATCTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTATGGTACACCCTCGAGTGGAAAGCTGT
droFic1 scf7180000454106:1827813-1827968 - CAAGAGCGCGAGGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGAAGGTGAGTATC-TGGATGTGACTGGCTCTT------G-----C--GGTCCTCTCACATCTAGTTATTCTCAGGCGCCGTGAGCTGCGACACAAATACGGAACGCCATCGAGCGGCAAGCTAT
droKik1 scf7180000302388:1718875-1719035 - CAGGAGCGAGAGGACGAGATGCGGGAGCTGGCGCTGAAACTGCGTCGAAGGTGAGTATTGTGGGTGTGGGTGGCTCTG------G-CGGCC--AGTCCTCTCACATCACCATATTCACAGGCGTCGCGAGCTACGCCACAAATACGGCACGCCCTCCAGCGGAAAGCTCT
droAna3 scaffold_13340:4690291-4690453 - dan_260 confident CAGGAGCGGGAAGACGAGATGCGCGAACTGGCGCTCAAGCTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTTA-----TTTGGCC--GGTCCTCTCACATCTCCATATTCACAGGCGTCGAGAGCTGCGCCACAAGTATGGTACGCCCTCCAGCGGAAAACTTT
droBip1 scf7180000396359:499256-499419 + CAGGAGCGCGAAGACGAGATGCGTGAACTGGCGCTAAAGTTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTAA---A-TATGGCC--AGTCCTCTCACATCTCCATATTCACAGGCGTCGCGAGCTGCGCCACAAGTATGGCACGCCCTCCAGCGGCAAACTGT
dp5 2:1751524-1751682 - dps_246 confident CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTT------G---GTC--AGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGGCACAAGTACGGCACGCCCTCCAGTGGCAAGCTGT
droPer2 scaffold_7:1904935-1905093 - dpe_337 confident CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTT------G---GTC--AGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGACACAAGTACGGCACGCCCTCCAGTGGCAAGCTGT
droWil2 scf2_1100000004902:9616787-9616946 - dwi_34 confident CAGGAGCGTGAAGATGAGATGAGAGAATTGGCGCTAAAGTTGCGCCGTAGGTGAGTATC-GGGTTGTGATTGGCTCCT------TGTGG-T--AGTCCTCTCACATCTCTATATTCACAGGCGTCGCGAGCTGCGTCACAAATATGGAACACCCTCTAGTGGTAAATTGT
droVir3 scaffold_13047:780897-781054 + dvi-mir-1003 Known_mirbase CAGGAACGCGAGGATGAGATGCGCGAGCTCGCGCTAAAGCTGCGTCGTAGGTGAGTAAT-CAGTTGTGGGTGGCTTTT------T---GAA--AGCCCTCTCACATCTCTTTATTCACAGGCGGCGTGAGTTGCGGCACAAATATGGAACGCCGTCCAGCGGCAAACTCT
droMoj3 scaffold_6540:4775633-4775790 + dmo_29 confident CAGGAGCGCGAGGACGAGATGCGCGAGCTGGCGCTCAAGCTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTCTA------G-----TGAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGAGAGTTGCGCCACAAGTACGGCACGCCGTCCAGTGGCAAGCTCT
droGri2 scaffold_14906:5529250-5529415 - dgr_13 confident CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAATTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTGTTCTTA-GGGAA--AGCCCTCTCACATCTCTTTATTCACAGGCGGCGCGAATTGCGCCACAAATATGGAACGCCCTCCAGTGGCAAACTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CAGGAGCGCGAGGATGAGATGCGAGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................TCTCACATTTACATATTCACAG..................................................2211542.001542144055146
..................................................................................................TCTCACATTTACATATTCACA...................................................211544.00544435122473
..................................................GTGGGTATC-TGGATGTGGTTGG.................................................................................................221234.00234154513341
..................................................................................................TCTCACATTTACATATTCACAGT.................................................231169.0016997133920
...................................................................................................CTCACATTTACATATTCACAG..................................................211110.00110109010
..................................................................................................TCTCACATTTACATATTCAC....................................................20174.007467007
..................................................GTGGGTATC-TGGATGTGGTTG..................................................................................................21162.00626202313
..................................................................................................TCTCACATTTACATATTCACAGA.................................................23141.004136005
...................................................................................................CTCACATTTACATATTCACA...................................................20135.003534001
...................................................................................................CTCACATTTACATATTCACAGT.................................................22130.003019353
..................................................................................................TCTCACATTTACATATTCACAC..................................................22121.002121000
..................................................................................................TCTCACATTTACATATTCA.....................................................19116.001620014
..................................................................................................TCTCACATTTACATATTCACAGC.................................................2319.0099000
....................................................................................................TCACATTTACATATTCACAG..................................................2017.0077000
..................................................GTGGGTATC-TGGATGTGGTTGGA................................................................................................2316.0061401
..................................................GTGGGTATC-TGGATGTGGTTGGT................................................................................................2316.0060240
..................................................GTGGGTATC-TGGATGTGGTTGGC................................................................................................2315.0050212
..................................................................................................TCTCACATTTACATATTCACG...................................................2114.0043010
...................................................................................................CTCACATTTACATATTCACAGA.................................................2214.0043100
..................................................................................................TCTCACATTTACATATTCACAT..................................................2214.0044000
......................................................................................................ACATTTACATATTCACAG..................................................1814.0044000
..................................................GTGGGTATC-TGGATGTGGTTGT.................................................................................................2213.0030210
..................................................GTGGGTATC-TGGATGTGGTT...................................................................................................2013.0030111
..................................................................................................TCTCACATTTACATATTCACAA..................................................2213.0033000
..................................................GTGGGTATC-TGGATGTGG.....................................................................................................1813.0030012
...................................................................................................CTCACATTTACATATTCACAGTT................................................2313.0032001
..................................................................................................TCTCACATTTACATATTCACAGCA................................................2413.0031002
.................................................................................................CTCTCACATTTACATATTCACAG..................................................2313.0033000
...................................................................................................CTCACATTTACATATTCAC....................................................1913.0033000
...................................................TGGGTATC-TGGATGTGGTTGGT................................................................................................2212.0022000
..................................................GTGGGTATC-TGGATGTGGTTGA.................................................................................................2212.0020101
....................................................................................................TCACATTTACATATTCACAGT.................................................2112.0021010
..................................................................................................TCTCACATTTACATATTCACAGTT................................................2412.0021001
.....................................................................................................CACATTTACATATTCACA...................................................1812.0022000
....................................................GGGTATC-TGGATGTGGTTGG.................................................................................................2012.0021001
..................................................................................................TCTCACATTTACATATTCACAGG.................................................2311.0011000
..................................................................................................TCTCACATTTACATATTCACATT.................................................2311.0010001
...................................................TGGGTATC-TGGATGTGGTTGG.................................................................................................2111.0010001
....................................................................................................TCACATTTACATATTCACA...................................................1911.0010001
..................................................................................................TCTCACATTTACATATTCACACC.................................................2311.0011000
...................................................TGGGTATC-TGGATGTGGT....................................................................................................1811.0011000
..................................................GTGGGTATC-TGGATGTGGTTGCA................................................................................................2311.0010100
...................................................................................................CTCACATTTACATATTCACAC..................................................2111.0011000
..................................................GTGGGTATC-TGGATGTGGTTGGTA...............................................................................................2411.0010001
..................................................................................................TCTCACATTTACATATTCACACA.................................................2311.0011000
..................................................GTGGGTATC-TGGATGTGGTTT..................................................................................................2111.0011000
...................................................................................................CTCACATTTACATATTCACAGTAA...............................................2411.0011000
..................................................GTGGGTATC-TGGATGTGGTTGGCT...............................................................................................2411.0010100
..................................................................................................TCTCACATTTACATATTCACACT.................................................2311.0011000
....................................................................................................TCACATTTACATATTCAC....................................................1811.0011000
...................................................................................................CTCACATTTACATATTCACAGC.................................................2211.0011000
..................................................................................................TCTCACATTTACATATTCACAGAA................................................2411.0011000
..................................................GTGGGTATC-TGGATGTGGT....................................................................................................1911.0010001
..................................................................................................TCTCACATTTACATATTCAGT...................................................2120.5010010
droSim2
CAGGAGCGCGAGGATGAGATGCGCGAACTGGCACTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCAAGTGGAAAGCTCTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................TCTCACATTTACATATTCACAG..................................................2217869.0078691186891090631479243926841825137664423074000
..................................................................................................TCTCACATTTACATATTCACA...................................................2112016.002016108335232285952003422081883137216000
..................................................................................................TCTCACATTTACATATTCACAGA.................................................2311528.00152816483004705632961651002000
..................................................................................................TCTCACATTTACATATTCAC....................................................201637.0063730132134413171210131001000
..................................................................................................TCTCACATTTACATATTCACAGT.................................................231519.0051917512200981281017668516000
..................................................................................................TCTCACATTTACATATTC......................................................181244.0024410005718600000000000
..................................................................................................TCTCACATTTACATATTCA.....................................................191233.0023390015116305130000000
..................................................GTGGGTATC-TGGATGTGGTTGG.................................................................................................221221.002213310010582071281179000
..................................................................................................TCTCACATTTACATATTCACAA..................................................221114.0011411100061942390005000
..................................................................................................TCTCACATTTACATATTCACAGAA................................................24187.0087110000101942140000000
..................................................GTGGGTATC-TGGATGTGGTTG..................................................................................................21170.00700002105501337412000
...................................................................................................CTCACATTTACATATTCACAG..................................................21170.00705205213501000100000
..................................................................................................TCTCACATTTACATATTCACAC..................................................22166.00662042410034062011000
..................................................................................................TCTCACATTTACATATTCACAGTA................................................24164.0064104000141817100000000
..................................................................................................TCTCACATTTACATATTCACAGGCGCC.............................................27125.00250000101500000000000
..................................................................................................TCTCACATTTACATATTCACAGG.................................................23122.002232401813000000000
..................................................................................................TCTCACATTTACATATTCACAGGCG...............................................25121.0021000012000000000000
...................................................................................................CTCACATTTACATATTCACAGA.................................................22118.001811000058020100000
..................................................................................................TCTCACATTTACATATTCACAGAAA...............................................25115.001500000015520002000
...................................................................................................CTCACATTTACATATTCACAGT.................................................22115.001510100031024300000
..................................................GTGGGTATC-TGGATGTGGTTGGT................................................................................................23110.001000000001006003000
..................................................................................................TCTCACATTTACATATTCACAGC.................................................23110.001030100014100000000
..................................................................................................TCTCACATTTACATATTCACAAA.................................................2328.501700000015550001000
..................................................GTGGGTATC-TGGATGTGGTT...................................................................................................2017.00700010020103000000
..................................................GTGGGTATC-TGGATGTGGTTGGCTC..............................................................................................2517.00700000000000070000
..................................................GTGGGTATC-TGGATGTGGT....................................................................................................1917.00700000200005000000
...................................................................................................CTCACATTTACATATTCACA...................................................2017.00700012400000000000
..................................................................................................TCTCACATTTACATATTCACAAAA................................................2426.001200000012720000000
..................................................GTGGGTATC-TGGATGTGGTTGGC................................................................................................2316.00610000100002011000
...................................................................................................CTCACATTTACATATTCAC....................................................1915.00500002300000000000
..................................................................................................TCTCACATTTACATATTCACG...................................................2114.00410100002000000000
..................................................................................................TCTCACATTTACATATTCACAGTAA...............................................2514.00400300010000000000
..................................................................................................TCTCACATTTACATATTCACAT..................................................2213.00300010001000100000
.................................................................................................CTCTCACATTTACATATTCACAG..................................................2313.00300001000001010000
..................................................GTGGGTATC-TGGATGTGGTTGGCT...............................................................................................2413.00300000000001002000
..................................................................................................TCTCACATTTACATATTCACACT.................................................2313.00300000021000000000
..................................................................................................TCTCACATTTACATATTCAA....................................................2013.00300000000300000000
..................................................................................................TCTCACATTTACATATTCACAGTT................................................2413.00300000011000001000
........................................................................GCTCTG------G-----C--GGTCCTCTCAC..................................................................1912.00220000000000000000
..................................................................................................TCTCACATTTACATATTCACAGGC................................................2412.00200000200000000000
..................................................................................................TCTCACATTTACATA.........................................................1512.00200000010100000000
..................................................................................................TCTCACATTTACATATTCACAGGCGC..............................................2612.00200000200000000000
....................................................................................................TCACATTTACATATTCACAGA.................................................2112.00200000010010000000
..................................................GTGGGTATC-TGGATGTGGTTGA.................................................................................................2212.00200000000000002000
......................................................................................................ACATTTACATATTCACAG..................................................1812.00200000000000101000
..................................................................................................TCTCACATTTACATATTCACATA.................................................2312.00200000001100000000
........................................................................GCTCTG------G-----C--GGTCCTCTCACATTT..............................................................2312.00210000000000001000
..................................................GTGGGTATC-TGGATGTGGTTGGTA...............................................................................................2412.00200000000000101000
...................................................................................................CTCACATTTACATATTCACAGAA................................................2312.00200000010100000000
..................................................GTGGGTATC-TGGATGTGG.....................................................................................................1812.00200000000002000000
...................................................TGGGTATC-TGGATGTGGTTGG.................................................................................................2112.00200010000001000000
........................................................................GCTCTG------G-----C--GGTCCTCTCACATTTACAT..........................................................2712.00200000000000020000
.....................................................................................................CACATTTACATATTCACAG..................................................1912.00200000100001000000
....................................................................................................TCACATTTACATATTCACAG..................................................2012.00200001000000100000
...................................................................................................CTCACATTTACATATTCACAGTT................................................2311.00100000010000000000
.................................................................................................CTCTCACATTTACATATTCAC....................................................2111.00100000100000000000
.........................................................................................................TTTACATATTCACAG..................................................1521.00200000000002000000
....................................................................................................TCACATTTACATATTCACA...................................................1911.00100000100000000000
.............................GGCACTGAAGCTGCGC.............................................................................................................................1611.00100000000001000000
..................................................................................................TCTCACATTTACATATTCACAAT.................................................2311.00100000000001000000
......................................................................................................ACATTTACATATTCACAGT.................................................1911.00100000000001000000
...............................................................................................TCCTCTCACATTTACATATTCAC....................................................2311.00100001000000000000
.................................................................................................CTCTCACATTTACATATTCACA...................................................2211.00100000000000001000
........................................................................GCTCTG------G-----C--GGTCCTCTCACATTTACATA.........................................................2811.00100000000000010000
..................................................................................................TCTCACATTTACATATTCAG....................................................2011.00100100000000000000
...................................................................................................CTCACATTTACATATTCA.....................................................1811.00100001000000000000
..................................................GTGGGTATC-TGGATGTGGTTGGCA...............................................................................................2411.00100000000000001000
..............TGAGATGCGCGAACTGGCACTGAAGC..................................................................................................................................2611.00100000000001000000
..................................................GTGGGTATC-TGGATGTGGTTGGCTCTG------......................................................................................2711.00101000000000000000
.......................................................................................................CATTTACATATTCACAG..................................................1711.00100000000001000000
.....................................................................................................CACATTTACATATTCACAGT.................................................2011.00100000000001000000
...................................................TGGGTATC-TGGATGTGGTTGGC................................................................................................2211.00100010000000000000
..................................................................................................TCTCACATTTACATATTCACAGGA................................................2411.00100000000100000000
........................................................................GCTCTG------G-----C--GGTCCTCTCACATTTACA...........................................................2611.00100000000100000000
..................................................GTGGGTATC-TGGATGTGGTTGGG................................................................................................2311.00100000000000001000
........................................................................................................ATTTACATATTCACAG..................................................1611.00100000001000000000
......................................................GTATC-TGGATGTGGTTG..................................................................................................1711.00100000000001000000
..................................................................................................TCTCACATTTACATATTCACGA..................................................2211.00100000001000000000
..................................................GTGGGTATC-TGGATGTGGTTC..................................................................................................2111.00100000000001000000
.....................................................GGTATC-TGGATGTGGTTGG.................................................................................................1911.00100000000001000000
..................................................................................................TCTCACATTTACATAT........................................................1611.00100000010000000000
..................................................GTGGGTATC-TGGATGTGGTTGGGG...............................................................................................2411.00100000000001000000
...................................................................................................CTCACATTTACATATTCACAGTA................................................2311.00100000010000000000
..................................................GTGGGTATC-TGGATGTG......................................................................................................1720.50100000000001000000
..................................................................................................TCTCACATTTACATATTCACACAA................................................2440.25100000000100000000
..........................................................C-TGGATGTGGTTGGA................................................................................................15190.05100000001000000000
dm3
CAGGAACGCGAGGATGAGATGCGCGAACTGGCCCTCAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAATATGGAACGCCCTCGAGTGGAAAGCTCTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................TCTCACATTTACATATTCACAG..................................................22170566.007056600003711242551712421347101410123314303386928242354411122211131813453136354223369773470002061225400000000000000000476461351401371969712018649689043177433032323035036033432214330237338740757870129362618916945259124521125770118711107631020420391170100010432201224341798863425151141023223481050515118116279591133570370148269404322621249738487361666111209013834371200025242200000914000000243032581064116149144848217537834910783980518115335349148700003818224164120084197191389253022135166680155854165971644327240101360089411433362452198587167530334422821216257658718326913752316214147501727641527152163020316213223222594254320464142091120
..................................................................................................TCTCACATTTACATATTCACA...................................................21131735.003173500003341432456220001000160120066051231041334112632310235483107111373000126200000000000000000314327259223468521776311646534326331691472371179135174531992275102767765015544749218322374422103212101751777881837220962642142425800000000701015161184261099444446122300143451404102971095630464603484501232776416894504012920119415828120005063200000061000006192109447255581621543671670216427118213034512770000231811126822003341773055775096474521017825176329475241048115414283184282661732027603103666650347428712315566654109127710636131379815313841511201512233311141436102515323156511773041122340
..................................................GTGGGTATC-TGGATGTGGTTGG.................................................................................................22129033.00290330000100320100201000002120120100000264115331612001151834050039011000000000000000000120002916027121136422211812434052218040768568111312949202100010001103000010000006763372526391523185127158142701810037131013550210060423313570600201241011010301073440125930310015415766244179178920102535142229164030600000131001310019022285351343514966698215474247331741528840371387687192877452252193352221288916626198322823606463332199881437217133693408542472245418315578611659989184226415342283281310671962227129327119696036962833986655812010
..................................................................................................TCTCACATTTACATATTCACAGT.................................................23118392.0018392000001223105050000005112001810000000214121021332754124311124305066307000000000000000000000009770616601713414371247422229487202000324125075164281131212631677244018401062716020150000000000750104100402311464634873397674290000097811983233417021003181110374321901831604312363024000200141500000191800000011268496751644801663565124107719243016426162000016717740627910478373511624433421532877422980961132024205276252168372405874192395112349014411696944030354606159844812121393213324032657368913134265591223701301101066104506667651813629278581304223022200
..................................................GTGGGTATC-TGGATGTGGTTG..................................................................................................2117808.00780800000023000100100000242400200000001652201131310031351144200100000000000000000000000116433104316002006113006820165249574613413402000000001000000012000029470219162617175252114141202150649040201000302100120271303426000004901050510000005862241016093343588845200500007400014517131146141233623282221817355954192210232584726723215026425612334311915123278202823515664608291314318819901724519761891341213032454694817739319430723760471235423101629176100155212630
..................................................................................................TCTCACATTTACATATTCAC....................................................2014417.00441700009100000104100200000200200464760010000000310120001201000310000000000000000001331321047615817678845854194741153156620283910877011123079202535702542033002022306879474000000000001000000003000000000383555141163210301000066854650150314910115400234401000010000000000000000234200032837875202719809922137000000012392403613503743031062125524283110344001512211013518151412103320000001220001010010000000100001220430
...................................................................................................CTCACATTTACATATTCACAGT.................................................2212815.0028150000000000000000000001010334000000000000102900130426310000000000000000000000094730203211218204504104003101318172205010013010110101010220000000000031604104231210580000016033033106106612051130015406841400020100000000000000383682511231119301956243674250000610027152722027111421418017510146813389658109642781152079779566725173952131481514132137121316351113504611603747631385457423030211612233410371980
..................................................................................................TCTCACATTTACATATTCACAGA.................................................2311590.001590000010000001010000000003001000000000100000000100112110000000000000000000000026221870450066210110321200140071029122211006041000201051480000000000000000301050012000006070009160130071206015125102000222110000001000000010000004300100149329514023743104175330038000011000211301100001201100004010085330810328145170051122341000000101000013100401100002000000000007230
..................................................................................................TCTCACATTTACATATTCA.....................................................1911577.001577000000000000000000000000000002294710100000000000000000000010000000000000000000303721141010500108134161030470033193242864174162140250237450321147163350000000000000000000010000000008014100101020520047502330134011120317001510000000000000000000000000110010000010025004000000002000000016231261512004129084522100010000442183611140010600000000000000010000000000010000003000
..................................................GTGGGTATC-TGGATGTGGTTGGT................................................................................................231804.00804000000000000000000001100000000000000000000000000101100000000000000000000000000000001000100200100000000005951001000000000000000001000000000000240001100000410002100000000000000000001000010002000000102000000000000500111510020102223102000001000423001018014212713513482541210110000080110942125000390184152111501315231737227161546412624824269103141410112440
..................................................................................................TCTCACATTTACATATTCACAC..................................................221739.0073900000000100100000000000000000000000000200100000000300000000000000000000000004123137051365101301160001203251740112300120200200000003100000000000000002100000000000050702018040001000301000700000010000000000000000000000001101042975668717368111101800000000000000001000010300000001003110120015040010100002000000300000000012300000000000000000000000
..................................................GTGGGTATC-TGGATGTGGTT...................................................................................................201652.0065200000000000000000000000000000000006501000000010100011000000000000000000000000000000002003002000000002000037400000001000000000000000001000000000001114100005100200001300100000000110110000000100000000010000000000003152851224131203200000001000000010000620200100144041129836411000000231207214260102612541005123361661615144621137318227512420118891240
..................................................................................................TCTCACATTTACATATTCACAT..................................................221412.00412000010000000100000000001010000000000001005000000000000000000000000000000000021230114601529010173032110000004746100000030010000010618900000000000000121210202002100020300160304004300000100220030010000000000000000000000210100987265513210316110010010013200000002201104100102112331130112020220400001000010000000000000000000000000000000110000
...................................................................................................CTCACATTTACATATTCACAG..................................................211401.004010000000000000100000000000010000000100000000000000000000010100000000000000000300420000213201102232200173131220174407013402000000000021000000000000000011000000000000300000511010002414051110020001300000000000000000000000002001001748722114191224800000000003000010000000200200007034320140504043110110000000000000000031000000000001000000000009220
..................................................................................................TCTCACATTTACATATTCACAA..................................................221368.003680000437401130400000000020000000000000000000000010000000000000000000000000000221441251098000412033214004504528060034002103100000001020000000000000000100000000000000200084060500060505020003006000000000000000001000000000000091298911222310300000000000020010000000000001000044500430023110000100000000000000000102000100000000100000000001020
..................................................GTGGGTATC-TGGATGTGGT....................................................................................................191313.0031300000000000000000000001000001000004110100100000000001000000000000000000000000000000000010000000000000000330010000100000000000000000000000000000014110002000300100010001000000101000500000001000000000000000000200010051101002020000010000000011111000133001020202702914221100000300014010001221012017416121000161211132626141321523421101472350
..................................................GTGGGTATC-TGGATGTGG.....................................................................................................181267.002670000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000100011300000000000000000000000000000000010020010001200010010000000000000000100000000000000000000020000000000000204411000120020000000000000000101002000000000050210000100000000011111220026110900709000000077651139113101622512010000148410
...................................................................................................CTCACATTTACATATTCACA...................................................201200.00200000000000000000000000000000000000000000000000000000000001000000000000000000021110000004210000051100024049510000000001301001200042000000000000000000000000000000000100860600210012070900000014000000000000000000000000022010011113026102200000000000000000200410310011004041040000102000000001020000000000000011000100000000100000000012020
..................................................................................................TCTCACATTTACATATTCACAGC.................................................231199.00199000000000000000000000000000000000000002000100000011100000000000000000000000002100000000000010002000104023301100000100100000100001000000000000010000010000000000000000010000010110001000000000000000000000000000000000000081565034300300000000001100000001010001000101032010312042332272150210020000000301000001000010100000000000010013200
....................................................................................................TCACATTTACATATTCACAG..................................................201199.00199000000000000000000000200000000000000100101100101030000000000000000000000000014920000001000000000000000030400000100001000000001010000000000000100030000030300100002000020000040201000010000000000000000000000000000000000131643128126700200000000001010000100100010102106019600020010200000101000000000100000000000111000100000000000020000
..................................................GTGGGTATC-TGGATGTGGTTGT.................................................................................................221160.001600000000000000000000000000000000000000000010000100010000000000000000000000000001000020002001000000000000101001000000000000000000000000000000000140020000000000000020000000000000010110000000000000001000000000000000003100000000000000000000000139010001113803010100031110000000010021302100150006010140200000231331005634212302200304300
..................................................................................................TCTCACATTTACATATTCACC...................................................211137.0013700000000000000000000000000000000000000000000000000010000000000000000000000001100100020100001010001000002110000000002111400020202301420000000000000000000000000000000000020010500000001010010001000000000000000000000000000000000010000000100000000012110110000420100000001002010000001000000000000000100000000010000000000000000000000000000
..................................................GTGGGTATC-TGGATGTGGTTGGA................................................................................................231130.0013000000000000000000000000000000000000010000000000000100000000000000000000000000000000400000000000000000000100000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000001001001010000001000000000000100000100021111400210000001000100002060000100080011303000205112114161131212630001413210
...................................................................................................CTCACATTTACATATTCACAGA.................................................221123.001230000000000000000000000000010000000000000000001000000000000000000000000000000011100000011000000010000001831000000000000000000000000000000000000000000000000000000000002102000000011000000040000000000000000000000001000000502572591001700000000001000000000010000001003020100000006021020200010000100100000002000200100100100000000021020
..................................................................................................TCTCACATTTACATATTC......................................................181122.001220000000000000000000000000002101110000000000000000000000000000000000000000000307400000020011000400000220202211000004010000000058880034000000000000000000000000000000000201120101170100000016000000000000000000000000003000000010000000000000000000000000000010000000000001000000000000010000100000000000000000000000000000000000000000000
....................................................................................................TCACATTTACATATTCACA...................................................191103.00103000000000000000000000000001000000000000000001000010000000000000000000000000001310000000100000010000000050300000000001000010000010000000000000000010000000010000100000010000021102000000000000000000000000000000000100000016100212400100001000002450000001330101100213069301000001000010110000000000000000000000100001000000000000000000
..................................................GTGGGTATC-TGGATGTGGTTGGC................................................................................................231101.00101000001000000000000000000000000000000000000000010000000000100000000000000000000010000000000000000000000001200000000000000000000000000021000000000001002000000000000100000000000000010000000010000010100000000000000000200100111200000000000100011000000110200100000000000101000000002010000002000400143141300033011401521312312111200100
....................................................................................................TCACATTTACATATTCACAGT.................................................21198.0098000000000000000000000100004000000000000100102101001210000000000000000000000000000000000000000000000000000100000000000000000000000000000000001100012001102100000200000000000000000000000000000000000000000000000000000000020000023000100000000000130000100200101201104120311120100443020010010000000000011000000313200201100000000011010
..................................................................................................TCTCACATTTACATATTCACATT.................................................23191.0091000000000000000000000000003000000000001101000100000000000000000000000000000010300130103000300000000000000000000000000000000000000000000000000400000022000100100001002000000000000000000000000000000000000011000000221000020000000110200000000000020000000440505000100000220110101010250410000000000000000000000000100000000000000000000
...................................................TGGGTATC-TGGATGTGGTTGG.................................................................................................21183.0083000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000102000010000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000100010000001000001010000000000010000000000200203011001005362818551241000000113010
..................................................................................................TCTCACATTTACATATTCACAGG.................................................23171.00710000000000000000000000000000000000000000000000000000000012720000000000000000010100000000000010000000000000110000000000000010000000000000000000000000000000000000100000000000000001001000002000100000000000000000000000000000101002002100000000000000000000000110000000000100040004450020201100000000000000000000000000200000000000002010
..................................................GTGGGTATC-TGGATGTGGTTT..................................................................................................21171.0071000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000020000000000000000100001000000000000100010010000000000000000001000000000000000000000010020110001100000000001000002310000211020303110014111020000000000000100001000102011010100000011301200002010001020000
..................................................................................................TCTCACATTTACATATTCACAGTT................................................24168.0068000000000000000000000000000000000000000000200000000000000000000000000000000010100000000000000000000000044260000000000000000002010000000000000100010000000000000000000000100010000000000000101000000000000000000000000000120121021100000000000001000000000000101000200020100100113040020010100000000000000000000010100000000101000001010
..................................................GTGGGTATC-TGGATGTGGTTGGTA...............................................................................................24165.0065000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030011000010110000000000100000100000000010000000000000000000000000020100000010800115010000110120601550101401010111000
....................................................GGGTATC-TGGATGTGGTTGG.................................................................................................20158.0058000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000010010000000000000001010100101010200001000020100000000000110200000000302003000100000050213303210100100041100
..................................................GTGGGTATC-TGGATGTGGTTGC.................................................................................................22154.0054000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000102110000000000110000000100100130100000000400024011010010201301511300000000102010
..................................................................................................TCTCACATTTACATATTCACG...................................................21150.0050000000000000010000000000000000000000000000000000000000000000000000000000000010000000021001000000000011001030000000000000000000010000000000000000000000000000000000000110400120001020000006000000000000000000000000000000000000000100200000000011320000000000000000000101010020000010000201000000000000000000000000000000000000000000000
..................................................................................................TCTCACATTTACATATTCAG....................................................20144.00440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000200000000000000000000000000000000000000000000000020000000010000000000000000000000000000000321492113000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000
.................................................................................................CTCTCACATTTACATATTCACAG..................................................23142.0042000000000000000000001100000000000000000000000000000000000000000000000000000001110000000000000000000000000002000000000000000000000000000000000000001001000000000000000010010020201000000000000000000000000000000000000000021015122000100000000001000000000000000100000100000121010100000100000000000000000000000000000010000000000000000
..................................................................................................TCTCACATTTACATATTCACACT.................................................23140.0040000000000000000000000000000000000000001001100000002000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000020310002000000000000000000000000210204000000010130020001211010000000000001000000000000000000000000000000000000
..................................................GTGGGTATC-TGGATGTGGTTGA.................................................................................................22137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000110000010000000001001001100000300000100100004000302102000000022000201110000100000000000
...................................................TGGGTATC-TGGATGTGGTTG..................................................................................................20132.0032000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000100100000000001000000000000010000000000000000004000000000000000000000300001000000010000000000100311302200000000100000
..................................................................................................TCTCACATTTACATATTCACAGAA................................................24132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000020400010000000110000000001100001000000000000000020000000000000000000000000000000000000000000000102000000000100000000000000000000000000000001011222000000000000000000000000000000000000001000000010000000100001000000000000000000000000000000000000001000
......................................................................................................ACATTTACATATTCACAG..................................................18132.0032000000000000000000000000000000000000000000000000000100000000000000000000000033120000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100010201100000000000000000000000000000000000000000030010200000000000000000000000000000000000001110001000020000000000000000000000010000000100000000000000001000
..................................................................................................TCTCACATTTACATATTCACAGATC...............................................25131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCTCACATTTACATATTCACT...................................................21131.0031000002000000000000000000000000000000000000000000000000000000000000000000000010000101000000010000000000010001000000010000000101001000000000000000000000000000000000001050200010000000000000000000000000000000000000000000000000000000000000000000320000100000000100001001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCACATTTACATATTCAC....................................................19130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000010003000001000000000000000000000000000000000000000000000000000000100200220102000010009000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..................................................................................................TCTCACATTTACATATTCACAGTAA...............................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000022232216000000000000000000000000000000000000000000100000110000000001000000001000000000000000000000000001000000
..................................................................................................TCTCACATTTACATATTCACAGTA................................................24128.0028000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000002005000000001000000001000000000000000000000100000000000000000000100000100000000000000000000000000000000000000000012204101000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000
..................................................................................................TCTCACATTTACATATTCACACC.................................................23128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062225003000100000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000010
..................................................GTGGGTATC-TGGATGTGGTTGGCT...............................................................................................24126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000100111000000020000100210100000
..................................................GTGGGTATC-TGGATGTGGTTGGG................................................................................................23123.0023000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100001201000000000000000000000000000001000000000200011113000011000000021000000000000000
.................................................................................................CTCTCACATTTACATATTCACAGT.................................................24123.00230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000112020000100200000000100000000000000000000000000000000000
...................................................................................................CTCACATTTACATATTCACATT.................................................22123.0023000000000000000000000000002000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000050000000000000000000000000000000000000000000000000000010000000000000002000000010000000000300000000001110000000000000200000000100000000000000000000000000000000000100
..................................................................................................TCTCACATTTACATATTCACAAA.................................................23222.5045000000000000000000000000000000000000000000000000000000000000000000000000000000000300040000120001200011101000001000000000000000000000000000000200001000000000000000000000100000000000000002001000000100000000000000000000050003017000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000
..................................................................................................TCTCACATTTACATATTCAA....................................................20122.0022000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000010010100000102000000000500000000000020000000000000000000000000000000000000010000000003000000001000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCACATTTACATATTCACAGC.................................................22122.0022000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000100000000100000000000000001000000000000000000000000000100000010000000000000000000000000000010000000002000100000000010110000000101000000000000000000100000000000100000000
......................................................................................................ACATTTACATATTCACAGT.................................................19120.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001010000130202020020000010000100000000000000000000000000000000000000
.....................................................................................................CACATTTACATATTCACAG..................................................19119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000120000101000000000000000010100000000000000000000010000000000000000010100000000000000000010000001200000000000000000010000000000000000000000000000010100000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000
..................................................................................................TCTCACATTTACATATTCACACA.................................................23118.0018000000000000000000000000000000000000000000000000001000000000000000000000000000000000010010000002000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032110200100000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................................................................................CTCTCACATTTACATATTCACA...................................................22118.0018000000000000000000000000000000001000000000000000001000000000000000000000000000210000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000004000000100002000000000000000000000000000000000000000000000000000000100000000000000000000000101000000000000000000000
..................................................GTGGGTATC-TGGATGTGGTTGGCTC..............................................................................................25117.0017000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000010000030000000000000000000000000000000000000001000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000010000000010000000000000000200000100100010000000
....................................................GGGTATC-TGGATGTGGTTG..................................................................................................19116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000015100000000000000000000500000000100000000000000000001000000000000010000
..................................................GTGGGTATC-TGGATGTGGTTTT.................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100001000160101000000001000000000000000001001000000000000000000000000000000000000000000
droEre2
CAGGAGCGCGAGGACGAGATGCGTGAACTGGCCCTGAAACTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTACGGAACGCCCTCGAGTGGAAAGCTCTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................TCTCACATTTACATATTCACAG..................................................2212190.0021901858622523241980
..................................................................................................TCTCACATTTACATATTCACA...................................................2111194.001194833512025132520
..................................................................................................TCTCACATTTACATATTCACAGT.................................................231187.0018772119235580
..................................................GTGGGTATC-TGGATGTGGTTGG.................................................................................................221179.0017953620331120
...................................................................................................CTCACATTTACATATTCACAG..................................................211137.00137134010020
..................................................................................................TCTCACATTTACATATTCAC....................................................201132.0013210214101140
...................................................................................................CTCACATTTACATATTCACA...................................................20163.006363000000
...................................................................................................CTCACATTTACATATTCACAGT.................................................22142.00421241013120
..................................................GTGGGTATC-TGGATGTGGTTG..................................................................................................21133.003321234210
..................................................................................................TCTCACATTTACATATTCACAGA.................................................23124.002418001050
..................................................................................................TCTCACATTTACATATTCA.....................................................19122.002250000170
..................................................................................................TCTCACATTTACATATTCACAA..................................................22113.001312000010
..................................................................................................TCTCACATTTACATATTCACAC..................................................22111.00118300000
..................................................................................................TCTCACATTTACATATTCACAT..................................................2218.0086000020
....................................................................................................TCACATTTACATATTCACAG..................................................2017.0075000020
..................................................................................................TCTCACATTTACATATTCACAGC.................................................2317.0071300120
.................................................................................................CTCTCACATTTACATATTCACAG..................................................2315.0054100000
...................................................................................................CTCACATTTACATATTCAC....................................................1915.0055000000
...................................................................................................CTCACATTTACATATTCACAT..................................................2115.0055000000
...................................................................................................CTCACATTTACATATTCACAGC.................................................2214.0042200000
..................................................GTGGGTATC-TGGATGTGGTTT..................................................................................................2114.0040012100
..................................................GTGGGTATC-TGGATGTGGTTGGC................................................................................................2314.0040000220
..................................................GTGGGTATC-TGGATGTGGTTGGT................................................................................................2314.0040000220
..................................................................................................TCTCACATTTACATATTCACG...................................................2113.0033000000
...................................................................................................CTCACATTTACATATTCACAGA.................................................2213.0032100000
..................................................GTGGGTATC-TGGATGTGGTT...................................................................................................2013.0031000110
..................................................................................................TCTCACATTTACATATTCACAGTA................................................2412.0022000000
..................................................GTGGGTATC-TGGATGTGGT....................................................................................................1912.0020000110
..................................................................................................TCTCACATTTACATATTCACAAA.................................................2312.0022000000
..................................................................................................TCTCACATTTACATATTCACACC.................................................2312.0022000000
.....................................................................................................CACATTTACATATTCACA...................................................1812.0021100000
..................................................................................................TCTCACATTTACATATTCACAGTT................................................2412.0021000010
...................................................TGGGTATC-TGGATGTGGTTGG.................................................................................................2112.0020000020
....................................................................................................TCACATTTACATATTCACA...................................................1912.0021000010
...................................................................................................CTCACATTTACATATTCACAGTTT...............................................2411.0010000010
.................................................................................................CTCTCACATTTACATATTCACA...................................................2211.0011000000
....................................................................................................TCACATTTACATATTCACAGT.................................................2111.0011000000
...................................................................................................CTCACATTTACATATTCACAA..................................................2111.0011000000
......................................................................................................ACATTTACATATTCACAG..................................................1811.0011000000
...................................................................................................CTCACATTTACATATTCACAC..................................................2111.0011000000
..................................................................................................TCTCACATTTACATATTCAA....................................................2011.0010000010
.....................................................................................................CACATTTACATATTCACAG..................................................1911.0010001000
..................................................GTGGGTATC-TGGATGTGG.....................................................................................................1811.0010000100
..................................................GTGGGTATC-TGGATGTGGTTGGCTC..............................................................................................2511.0010000010
..................................................GTGGGTATC-TGGATGTGGTTGGTA...............................................................................................2411.0010000010
...................................................TGGGTATC-TGGATGTGGTTGGC................................................................................................2211.0011000000
..................................................................................................TCTCACATTTACATATTCACGC..................................................2211.0010000010
.....................................................................................................CACATTTACATATTCACAGT.................................................2011.0010000010
...................................................................................................CTCACATTTACATATTCACAGTAA...............................................2411.0011000000
..................................................................................................TCTCACATTTACATATTCACAAAA................................................2411.0011000000
..................................................................................................TCTCACATTTACATATTCACC...................................................2111.0010001000
..................................................GTGGGTATC-TGGATGTGGTTGGCTCT.............................................................................................2611.0010000010
droYak3
CAGGAGCGCGAGGACGAGATGCGTGAACTGGCTCTGAAGCTGCGCAGAAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATTTACATATTCACAGGCGTCGTGAGCTGCGACACAAATATGGAACGCCCTCGAGTGGAAAGCTCTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................TCTCACATTTACATATTCACAG..................................................2211814.0018144601274332761121000
..................................................................................................TCTCACATTTACATATTCACA...................................................211864.00864497241634181940000
..................................................................................................TCTCACATTTACATATTCACAGT.................................................231173.001736115161141290000
...................................................................................................CTCACATTTACATATTCACAG..................................................211129.001291127100000000
..................................................................................................TCTCACATTTACATATTCAC....................................................201102.001021287200100000
...................................................................................................CTCACATTTACATATTCACA...................................................20179.0079079000000000
..................................................GTGGGTATC-TGGATGTGGTTGG.................................................................................................22174.00740839171540000
..................................................GTGGGTATC-TGGATGTGGTTG..................................................................................................21136.00361213140420000
...................................................................................................CTCACATTTACATATTCACAGT.................................................22133.0033119442210000
..................................................................................................TCTCACATTTACATATTCACAC..................................................22114.001467100000000
..................................................................................................TCTCACATTTACATATTCACAGA.................................................23113.0013111000100000
....................................................................................................TCACATTTACATATTCACA...................................................19111.0011010000100000
....................................................................................................TCACATTTACATATTCACAG..................................................2018.00808000000000
..................................................................................................TCTCACATTTACATATTCACAA..................................................2218.00808000000000
..................................................................................................TCTCACATTTACATATTCACAT..................................................2217.00707000000000
..................................................................................................TCTCACATTTACATATTCACAGC.................................................2316.00611400000000
..................................................................................................TCTCACATTTACATATTCA.....................................................1915.00512010100000
....................................................................................................TCACATTTACATATTCACAGT.................................................2115.00503010100000
.................................................................................................CTCTCACATTTACATATTCACAG..................................................2315.00504010000000
...................................................................................................CTCACATTTACATATTCAC....................................................1914.00404000000000
......................................................................................................ACATTTACATATTCACAG..................................................1814.00404000000000
.....................................................................................................CACATTTACATATTCACAGT.................................................2013.00302100000000
..................................................................................................TCTCACATTTACATATTCACAGTA................................................2412.00200200000000
.................................................................................................CTCTCACATTTACATATTCACA...................................................2212.00202000000000
.....................................................................................................CACATTTACATATTCACAG..................................................1912.00202000000000
..................................................GTGGGTATC-TGGATGTGG.....................................................................................................1812.00201100000000
..................................................................................................TCTCACATTTACATATTCACAGTT................................................2412.00201100000000
..................................................................................................TCTCACATTTACATATTCACC...................................................2112.00200010100000
...................................................................................................CTCACATTTACATATTCACAGTT................................................2311.00101000000000
..................................................GTGGGTATC-TGGATGTGGTTGGC................................................................................................2311.00100100000000
..................................................GTGGGTATC-TGGATGTGGTA...................................................................................................2011.00100100000000
...................................................................................................CTCACATTTACATATTCACAGTAA...............................................2411.00100100000000
........................................................................GCTCTG------G-----C--GGTCCTCTCACATTT..............................................................2311.00110000000000
..................................................................................................TCTCACATTTACATATTCACAGG.................................................2311.00101000000000
..................................................GTGGGTATC-TGGATGTGGC....................................................................................................1911.00100100000000
..................................................GTGGGTATC-TGGATGTGGTTGGCTC..............................................................................................2511.00100100000000
.....................................................................................................CACATTTACATATTCACA...................................................1811.00101000000000
...................................................................................................CTCACATTTACATATTCA.....................................................1811.00101000000000
..................................................................................................TCTCACATTTACATATTCACAGAG................................................2411.00101000000000
..................................................GTGGGTATC-TGGATGTGGTTGA.................................................................................................2211.00101000000000
....................................................................................................TCACATTTACATATTCACAGA.................................................2111.00101000000000
.................................................................................................CTCTCACATTTACATATTCACC...................................................2211.00101000000000
......................................................................................................ACATTTACATATTCACAGT.................................................1911.00101000000000
..................................................GTGGGTATC-TGGATGTGGAA...................................................................................................2011.00100100000000
..................................................GTGGGTATC-TGGATGTGGTT...................................................................................................2011.00100100000000
...................................................................................................CTCACATTTACATATTCACAGGT................................................2311.00101000000000
...................................................TGGGTATC-TGGATGTGGTTGG.................................................................................................2111.00101000000000
..................................................GTGGGTATC-TGGATGTGGT....................................................................................................1911.00100100000000
..................................................GTGGGTATC-TGGATGTGGTTGGT................................................................................................2311.00100000010000
...................................................................................................CTCACATTTACATATTCACAGA.................................................2211.00101000000000
.....................................................................................................CACATTTACATATTCACAA..................................................1920.50101000000000
.....................................................................................................CACATTTACATATTCACACT.................................................2040.25100100000000
droEug1
CAGGAGCGTGAGGACGAGATGCGTGAGTTGGCTTTGAAGCTGCGCAGGAGGTGGGTATC-TTGATGTGGTTGGCTCCG------G-----C--TGTCCTCTCACATCTGTATATTCACAGGCGTCGTGAGCTGCGTCACAAGTATGGAACGCCCTCAAGCGGCAAGCTGTSizeHit CountTotal NormTotal
No Reads
droBia1
CAGGAACGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGAAGGTGGGTATT-TTGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATCTATATATTCACAGGCGTCGTGAGCTGCGGCACAAATATGGCACGCCCTCCAGCGGCAAGCTCTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGGAGCGCGAGGACGAGATGCGTGAGCTGGCGCTGAAGCTGCGCAGGAGGTGGGTATC-TGGATGTGGTTGGCTCTG------G-----C--GGTCCTCTCACATCTACATATTCACAGGCGTCGTGAGCTGCGACACAAATACGGAACGCCCTCGAGCGGCAAGCTTTSizeHit CountTotal NormTotal
No Reads
droEle1
CAGGAACGTGAGGACGAGATGCGCGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTTGGCTCTT------C-TGG-G--CGTCCTCTCACATCTACATATTCACAGGCGGCGTGAGCTGCGCCACAAGTATGGGACCCCTTCGAGCGGCAAGCTCTSizeHit CountTotal NormTotal
No Reads
droRho1
CAGGAGCGTGAAGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGGAGGTGAGTATC-TTGATGTGGTCGGCTTTA------G-----C--GGTCCTCTCACATCTACATATTCACAGGCGCCGTGAGCTGCGTCACAAGTATGGTACACCCTCGAGTGGAAAGCTGTSizeHit CountTotal NormTotal
No Reads
droFic1
CAAGAGCGCGAGGACGAGATGCGTGAACTGGCGCTGAAGCTGCGCAGAAGGTGAGTATC-TGGATGTGACTGGCTCTT------G-----C--GGTCCTCTCACATCTAGTTATTCTCAGGCGCCGTGAGCTGCGACACAAATACGGAACGCCATCGAGCGGCAAGCTATSizeHit CountTotal NormTotal
No Reads
droKik1
CAGGAGCGAGAGGACGAGATGCGGGAGCTGGCGCTGAAACTGCGTCGAAGGTGAGTATTGTGGGTGTGGGTGGCTCTG------G-CGGCC--AGTCCTCTCACATCACCATATTCACAGGCGTCGCGAGCTACGCCACAAATACGGCACGCCCTCCAGCGGAAAGCTCTSizeHit CountTotal NormTotal
No Reads
droAna3
CAGGAGCGGGAAGACGAGATGCGCGAACTGGCGCTCAAGCTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTTA-----TTTGGCC--GGTCCTCTCACATCTCCATATTCACAGGCGTCGAGAGCTGCGCCACAAGTATGGTACGCCCTCCAGCGGAAAACTTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................TCTCACATCTCCATATTCACAG..................................................2212399.0023991838296108511294
..................................................................................................TCTCACATCTCCATATTCACA...................................................211983.009835263037047829
..................................................GTGAGTATAGTGGATGTGGGTGG.................................................................................................231683.00683114503176385
..................................................................................................TCTCACATCTCCATATTCACAGT.................................................231593.0059326015125753349
..................................................................................................TCTCACATCTCCATATTCAC....................................................201316.0031679202128114
...................................................................................................CTCACATCTCCATATTCACAG..................................................211118.0011811620000
..................................................................................................TCTCACATCTCCATATTCACAGTT................................................24182.0082421138216
..................................................................................................TCTCACATCTCCATATTCACAGC.................................................23164.00642610100
..................................................................................................TCTCACATCTCCATATTCACAGA.................................................23162.006219401002
..................................................GTGAGTATAGTGGATGTGGGTGGT................................................................................................24153.005370001333
...................................................................................................CTCACATCTCCATATTCACA...................................................20138.00383620000
...................................................................................................CTCACATCTCCATATTCACAGT.................................................22130.00302520021
..................................................................................................TCTCACATCTCCATATTCACAA..................................................22128.00288181100
...................................................TGAGTATAGTGGATGTGGGTGG.................................................................................................22124.00248001213
..................................................GTGAGTATAGTGGATGTGGGT...................................................................................................21122.0022441067
..................................................................................................TCTCACATCTCCATATTCACAGTA................................................24121.00213180000
..................................................GTGAGTATAGTGGATGTGGGTG..................................................................................................22120.0020300089
..................................................................................................TCTCACATCTCCATATTCA.....................................................19117.0017450602
..................................................GTGAGTATAGTGGATGTGGG....................................................................................................20117.00172200103
..................................................................................................TCTCACATCTCCATATTCACAC..................................................22112.0012363000
...................................................................................................CTCACATCTCCATATTCAC....................................................19111.0011830000
..................................................................................................TCTCACATCTCCATATTCACAGTAA...............................................25110.0010190000
..................................................GTGAGTATAGTGGATGTGGGTGT.................................................................................................23110.0010200026
..................................................GTGAGTATAGTGGATGTGG.....................................................................................................19110.0010010018
....................................................................................................TCACATCTCCATATTCACAG..................................................2019.009520002
..................................................................................................TCTCACATCTCCATATTCACAT..................................................2218.008206000
...................................................TGAGTATAGTGGATGTGGGTGGT................................................................................................2318.008000017
...................................................................................................CTCACATCTCCATATTCACAGTT................................................2317.007500002
.................................................................................................CTCTCACATCTCCATATTCACAG..................................................2316.006510000
.....................................................................................................CACATCTCCATATTCACAG..................................................1916.006420000
...................................................TGAGTATAGTGGATGTGGGT...................................................................................................2015.005011111
....................................................................................................TCACATCTCCATATTCACAGT.................................................2115.005400100
...................................................TGAGTATAGTGGATGTGGGTG..................................................................................................2115.005010004
..................................................................................................TCTCACATCTCCATATTCACAGG.................................................2315.005410000
...................................................................................................CTCACATCTCCATATTCACAGA.................................................2214.004400000
......................................................GTATAGTGGATGTGGGTGG.................................................................................................1914.004300010
..................................................................................................TCTCACATCTCCATATTCACC...................................................2113.003002001
....................................................................................................TCACATCTCCATATTCACA...................................................1913.003110100
.................................................................................................CTCTCACATCTCCATATTCACA...................................................2213.003030000
....................................................GAGTATAGTGGATGTGGGTGG.................................................................................................2113.003000003
..................................................................................................TCTCACATCTCCATATTCACAGAA................................................2413.003120000
...................................................TGAGTATAGTGGATGTGGG....................................................................................................1912.002000002
..................................................GTGAGTATAGTGGATGTGGGTGGA................................................................................................2412.002000011
..................................................................................................TCTCACATCTCCATATTCACG...................................................2112.002020000
......................................................................................................ACATCTCCATATTCACAGT.................................................1912.002010001
.....................................................................................................CACATCTCCATATTCACA...................................................1812.002110000
.................................................................................................CTCTCACATCTCCATATTCACAGT.................................................2412.002110000
.................................................................................................CTCTCACATCTCCATATTCACAGTT................................................2512.002110000
..................................................................................................TCTCACATCTCCATATTCACAGTTA...............................................2512.002110000
.....................................................................................................CACATCTCCATATTCACAGT.................................................2012.002110000
.................................................................................................CTCTCACATCTCCATATTCA.....................................................2011.001010000
.........................................................................CTCTTA-----TTTGGCC--GGTCC........................................................................1811.001010000
..................................................................................................TCTCACATCTCCATATTCAA....................................................2011.001000100
....................................................................................................TCACATCTCCATATTCAC....................................................1811.001100000
..................................................................................................TCTCACATCTCCATATTCACAGTG................................................2411.001010000
...................................................TGAGTATAGTGGATGTGGT....................................................................................................1911.001000010
.................................................................................................CTCTCACATCTCCATATTCACAGA.................................................2411.001010000
..................................................................................................TCTCACATCTCCATATTC......................................................1811.001100000
..................................................GTGAGTATAGTGGATGTGGGTGGC................................................................................................2411.001000001
..................................................................................................TCTCACATCTCCATATTCACATAA................................................2411.001001000
.......................................................................................................CATCTCCATATTCACAGT.................................................1811.001100000
...........AGACGAGATGCGCGAACTGGC..........................................................................................................................................2111.001010000
..................................................GTGAGTATAGTGGATGTGGGTGGG................................................................................................2411.001100000
..................................................................................................TCTCACATCTCCATATTCACAAA.................................................2311.001100000
................................................................................................................................AGCTGCGCCACAAGTATGGTAC....................2211.001100000
..................................................................................................TCTCACATCTCCATATTCACAAC.................................................2311.001010000
..................................................GTGAGTATAGTGGATGTGGGTT..................................................................................................2211.001100000
...................................................TGAGTATAGTGGATGTGGGTA..................................................................................................2111.001100000
..................................................................................................TCTCACATCTCCATATTCACATT.................................................2311.001001000
..................................................................................................TCTCACATCTCCATATTCG.....................................................1911.001100000
droBip1
CAGGAGCGCGAAGACGAGATGCGTGAACTGGCGCTAAAGTTACGCCGAAGGTGAGTATAGTGGATGTGGGTGGCTCTAA---A-TATGGCC--AGTCCTCTCACATCTCCATATTCACAGGCGTCGCGAGCTGCGCCACAAGTATGGCACGCCCTCCAGCGGCAAACTGTSizeHit CountTotal NormTotal
No Reads
dp5
CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTT------G---GTC--AGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGGCACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................TCTCACATCTCTATATTCACAG..................................................2212900.00290001890243344252118202841
..................................................................................................TCTCACATCTCTATATTCACA...................................................2111024.00102426436169142945332
..................................................................................................TCTCACATCTCTATATTCACAGT.................................................231402.00402011949104814529011
..................................................GTGGGTATCGTGCTTGTGGGTGG.................................................................................................231223.002230811672914264244
...................................................................................................CTCACATCTCTATATTCACAG..................................................211155.00155015210110000
..................................................................................................TCTCACATCTCTATATTCACAC..................................................221117.001170732911211000
..................................................................................................TCTCACATCTCTATATTCAC....................................................201115.001150711220480000
...................................................................................................CTCACATCTCTATATTCACA...................................................20172.007207010010000
..................................................................................................TCTCACATCTCTATATTCACAGA.................................................23169.006904498321110
..................................................................................................TCTCACATCTCTATATTCACACC.................................................23137.003702098000000
..................................................................................................TCTCACATCTCTATATTCACAGC.................................................23133.003302218200000
..................................................................................................TCTCACATCTCTATATTCACAA..................................................22116.001601220110000
..................................................GTGGGTATCGTGCTTGTGGGTG..................................................................................................22116.001601021300000
....................................................................................................TCACATCTCTATATTCACAG..................................................20115.001501100030010
..................................................GTGGGTATCGTGCTTGTGGGT...................................................................................................21115.00150410123031
..................................................GTGGGTATCGTGCTTGTGGG....................................................................................................20111.00110620111000
..................................................................................................TCTCACATCTCTATATTCACAGTT................................................24110.00100700200010
.....................................................................................................CACATCTCTATATTCACAG..................................................1919.0090700200000
...................................................................................................CTCACATCTCTATATTCACAC..................................................2119.0090900000000
...................................................................................................CTCACATCTCTATATTCACAGT.................................................2219.0090700001001
..................................................GTGGGTATCGTGCTTGTGGGTGGC................................................................................................2419.0090510102000
..................................................GTGGGTATCGTGCTTGTGG.....................................................................................................1919.0090600003000
..................................................................................................TCTCACATCTCTATATTCA.....................................................1918.0080210121001
..................................................GTGGGTATCGTGCTTGTGGGTGGT................................................................................................2417.0070200101003
..................................................................................................TCTCACATCTCTATATTCACACT.................................................2316.0060410100000
..................................................................................................TCTCACATCTCTATATTCACACA.................................................2316.0060510000000
..................................................................................................TCTCACATCTCTATATTCACACCA................................................2416.0060501000000
......................................................................................................ACATCTCTATATTCACAG..................................................1815.0050400100000
..................................................................................................TCTCACATCTCTATATTCACAGTA................................................2414.0040400000000
..................................................................................................TCTCACATCTCTATATTCACAGG.................................................2314.0040211000000
..................................................GTGGGTATCGTGCTTGTGGT....................................................................................................2014.0040200002000
...................................................TGGGTATCGTGCTTGTGGGTGG.................................................................................................2214.0040310000000
.................................................................................................CTCTCACATCTCTATATTCACA...................................................2213.0030101100000
....................................................................................................TCACATCTCTATATTCACA...................................................1913.0030000020001
...................................................................................................CTCACATCTCTATATTCACAGA.................................................2213.0030300000000
.................................................................................................CTCTCACATCTCTATATTCACAG..................................................2313.0030110100000
...................................................................................................CTCACATCTCTATATTCACAGAAA...............................................2412.0020200000000
..................................................GTGGGTATCGTGCTTGTG......................................................................................................1812.0020100100000
....................................................................................................TCACATCTCTATATTCACAGTT................................................2212.0020000000020
...................................................................................................CTCACATCTCTATATTCACACC.................................................2212.0020200000000
...................................................................................................CTCACATCTCTATATTCAC....................................................1912.0020200000000
....................................................GGGTATCGTGCTTGTGGGTGG.................................................................................................2112.0020110000000
..................................................................................................TCTCACATCTCTATATTCACAGAA................................................2412.0020100000010
..................................................................................................TCTCACATCTCTATATTCACT...................................................2111.0010000100000
..................................................................................................TCTCACATCTCTATATTCACAGCGA...............................................2511.0010010000000
....................................................................................................TCACATCTCTATATTCACAA..................................................2011.0010100000000
..................................................GTGGGTATCGTGCTTGTGGGTGGTA...............................................................................................2511.0010000100000
...................................................................................................CTCACATCTCTATATTCACAT..................................................2111.0010100000000
.................................................................................................CTCTCACATCTCTATATTCACAGC.................................................2411.0010010000000
.................................................................................................CTCTCACATCTCTATATTCACAGA.................................................2411.0010010000000
..................................................GTGGGTATCGTGCTTGTGT.....................................................................................................1911.0010000010000
.................................................................................................CTCTCACATCTCTATATTCACAGT.................................................2411.0010100000000
..................................................GTGGGTATCGTGCTTGTGGGTGGCTCT.............................................................................................2711.0010000010000
....................................................GGGTATCGTGCTTGTGGGTGGC................................................................................................2211.0010100000000
..................................................................................................TCTCACATCTCTATATTCACCT..................................................2211.0010000100000
...................................................................................................CTCACATCTCTATATTCACACCA................................................2311.0010100000000
................................................................................................CCTCTCACATCTCTATATTCACAGT.................................................2511.0010100000000
..................................................................................................TCTCACATCTCTATATTC......................................................1811.0010100000000
.......................................................................................................CATCTCTATATTCACAGT.................................................1811.0010100000000
..................................................................................................TCTCACATCTCTATATTCACATT.................................................2311.0010000100000
..................................................................................................TCTCACATCTCTATATTCACAGCTT...............................................2511.0010100000000
.....................................................................................................CACATCTCTATATTCACACC.................................................2011.0010010000000
..................................................GTGGGTATCGTGCTTGTGGGTGGCTC..............................................................................................2611.0010000001000
..................................................GTGGGTATCGTGCTTGTGGGTGGA................................................................................................2411.0010000010000
..................................................GTGGGTATCGTGCTTGTGGGTGGCT...............................................................................................2511.0010100000000
.........GAGGATGAGATGCGCGAACT.............................................................................................................................................2011.0010100000000
..................................................................................................TCTCACATCTCTATATTCACAGAAA...............................................2511.0010100000000
...................................................TGGGTATCGTGCTTGTGGGTGGA................................................................................................2311.0010000000001
......................................................................................................ACATCTCTATATTCACAGA.................................................1911.0010100000000
...................................................TGGGTATCGTGCTTGTGGGT...................................................................................................2011.0010100000000
...................................................................................................CTCACATCTCTATATTCACAGTA................................................2311.0010100000000
....................................................................................................TCACATCTCTATATTCACAGT.................................................2111.0010100000000
..................................................GTGGGTATCGTGCTTGTGTA....................................................................................................2011.0010100000000
droPer2
CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAGCTACGTAGAAGGTGGGTATCGTGCTTGTGGGTGGCTCTT------G---GTC--AGTCCTCTCACATCTCTATATTCACAGGCGCCGCGAGTTGCGACACAAGTACGGCACGCCCTCCAGTGGCAAGCTGTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................TCTCACATCTCTATATTCACAG..................................................2211166.0011662145201072141092
..................................................................................................TCTCACATCTCTATATTCACA...................................................211339.0033951774973350
..................................................................................................TCTCACATCTCTATATTCACAGT.................................................231280.002808479981162
..................................................GTGGGTATCGTGCTTGTGGGTGG.................................................................................................231113.001133312151169
..................................................................................................TCTCACATCTCTATATTCACAC..................................................22157.00575482200
...................................................................................................CTCACATCTCTATATTCACAG..................................................21135.00350350000
..................................................................................................TCTCACATCTCTATATTCAC....................................................20131.003101415110
..................................................................................................TCTCACATCTCTATATTCACACC.................................................23124.00241761000
..................................................................................................TCTCACATCTCTATATTCACAGA.................................................23121.00212142120
...................................................................................................CTCACATCTCTATATTCACA...................................................20121.00210200100
..................................................GTGGGTATCGTGCTTGTGGGT...................................................................................................21120.00200103313
..................................................GTGGGTATCGTGCTTGTGGG....................................................................................................20120.00200101315
..................................................GTGGGTATCGTGCTTGTGGGTG..................................................................................................2219.009033003
..................................................................................................TCTCACATCTCTATATTCA.....................................................1916.006020130
..................................................................................................TCTCACATCTCTATATTCACAGTT................................................2416.006011130
....................................................................................................TCACATCTCTATATTCACAG..................................................2016.006040110
..................................................GTGGGTATCGTGCTTGTGG.....................................................................................................1915.005000014
..................................................GTGGGTATCGTGCTTGTGGT....................................................................................................2015.005000104
..................................................GTGGGTATCGTGCTTGTGGGTGGC................................................................................................2414.004000004
..................................................GTGGGTATCGTGCTTGTGGGTGGT................................................................................................2414.004001003
..................................................................................................TCTCACATCTCTATATTCACAT..................................................2214.004020110
...................................................................................................CTCACATCTCTATATTCAC....................................................1914.004040000
.................................................................................................CTCTCACATCTCTATATTCACA...................................................2213.003012000
...................................................................................................CTCACATCTCTATATTCACAC..................................................2113.003030000
....................................................................................................TCACATCTCTATATTCACA...................................................1913.003001110
..................................................GTGGGTATCGTGCTTGTGGGTGGCT...............................................................................................2512.002000002
..................................................................................................TCTCACATCTCTATATTCACAGG.................................................2312.002020000
..................................................GTGGGTATCGTGCTTGTG......................................................................................................1812.002010010
..................................................GTGGGTATCGTGCTTGTGTT....................................................................................................2012.002000002
..................................................................................................TCTCACATCTCTATATTCACACT.................................................2312.002000110
.....................................................................................................CACATCTCTATATTCACA...................................................1812.002020000
..................................................................................................TCTCACATCTCTATATTCACAGTAA...............................................2512.002020000
.......................................................................................................CATCTCTATATTCACAGT.................................................1812.002011000
.................................................................................................CTCTCACATCTCTATATTCACAG..................................................2312.002020000
..................................................GTGGGTATCGTGCTTGTGGGTT..................................................................................................2212.002000002
...................................................................................................CTCACATCTCTATATTCACAGT.................................................2212.002020000
...................................................TGGGTATCGTGCTTGTGGGTGG.................................................................................................2212.002010001
...................................................................................................CTCACATCTCTATATTCACACC.................................................2212.002020000
..................................................................................................TCTCACATCTCTATATTCACAGC.................................................2312.002001100
..................................................................................................TCTCACATCTCTATATTCACAGTA................................................2411.001010000
...................................................................................................CTCACATCTCTATATTCACAGGTA...............................................2411.001010000
..................................................................................................TCTCACATCTCTATATTCACACTA................................................2411.001010000
....................................................................................................TCACATCTCTATATTCACAGT.................................................2111.001000100
..................................................................................................TCTCACATCTCTATATTCACACA.................................................2311.001010000
..................................................................................................TCTCACATCTCTATATTCACAGGTA...............................................2511.001010000
..................................................................................................TCTCACATCTCTATATTCACACCA................................................2411.001010000
...................................................TGGGTATCGTGCTTGTGGGT...................................................................................................2011.001000001
....................................................................................................TCACATCTCTATATTCAC....................................................1811.001010000
..................................................................................................TCTCACATCTCTATATTCACCTT.................................................2311.001000010
..................................................................................................TCTCACATCTCTATATTCACAA..................................................2211.001010000
..................................................................................................TCTCACATCTCTATATTCACATT.................................................2311.001010000
..................................................GTGGGTATCGTGCTTGTGGC....................................................................................................2011.001000010
..................................................GTGGGTATCGTGCTTGTGGGTGGCTCT.............................................................................................2711.001010000
..................................................GTGGGTATCGTGCTTGTGGGG...................................................................................................2111.001000001
......................................................................................................ACATCTCTATATTCACAG..................................................1811.001010000
.......................................................TATCGTGCTTGTGGGTGGT................................................................................................1911.001001000
droWil2
CAGGAGCGTGAAGATGAGATGAGAGAATTGGCGCTAAAGTTGCGCCGTAGGTGAGTATC-GGGTTGTGATTGGCTCCT------TGTGG-T--AGTCCTCTCACATCTCTATATTCACAGGCGTCGCGAGCTGCGTCACAAATATGGAACACCCTCTAGTGGTAAATTGTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................TCTCACATCTCTATATTCACAG..................................................22110655.001065536474073818981029
..................................................................................................TCTCACATCTCTATATTCACA...................................................2112106.00210624211632293406
..................................................GTGAGTATC-GGGTTGTGATTGG.................................................................................................221757.007578108134241266
..................................................................................................TCTCACATCTCTATATTCACAGT.................................................231584.00584751781022992
..................................................................................................TCTCACATCTCTATATTCAC....................................................201321.003218019801726
...................................................................................................CTCACATCTCTATATTCACAG..................................................211316.003165304034
...................................................................................................CTCACATCTCTATATTCACA...................................................20195.0095094001
..................................................GTGAGTATC-GGGTTGTGATTG..................................................................................................21185.008547213914
..................................................................................................TCTCACATCTCTATATTCACAC..................................................22164.00644317121
..................................................................................................TCTCACATCTCTATATTCACAGA.................................................23151.00511628142
..................................................................................................TCTCACATCTCTATATTCACAA..................................................22145.0045231084
..................................................................................................TCTCACATCTCTATATTCA.....................................................19134.00341260412
....................................................................................................TCACATCTCTATATTCACAG..................................................20125.0025219022
...................................................................................................CTCACATCTCTATATTCACAGT.................................................22121.0021118200
...................................................................................................CTCACATCTCTATATTCAC....................................................19118.0018018000
..................................................................................................TCTCACATCTCTATATTCACAGG.................................................23115.001596000
..................................................................................................TCTCACATCTCTATATTCACAGC.................................................23112.001282020
...................................................TGAGTATC-GGGTTGTGATTGG.................................................................................................21110.001008101
.................................................................................................CTCTCACATCTCTATATTCACAG..................................................2319.00907020
..................................................GTGAGTATC-GGGTTGTGATTGGT................................................................................................2319.00901332
..................................................................................................TCTCACATCTCTATATTCACAT..................................................2217.00712040
.....................................................................................................CACATCTCTATATTCACAG..................................................1917.00707000
..................................................GTGAGTATC-GGGTTGTGATT...................................................................................................2016.00612120
......................................................................................................ACATCTCTATATTCACAG..................................................1816.00606000
.................................................................................................CTCTCACATCTCTATATTCACA...................................................2215.00503020
...................................................................................................CTCACATCTCTATATTCACAGA.................................................2215.00505000
....................................................................................................TCACATCTCTATATTCACA...................................................1915.00504001
..................................................................................................TCTCACATCTCTATATTCACAAA.................................................2314.00404000
..................................................................................................TCTCACATCTCTATATTCACAGAA................................................2414.00421010
..................................................................................................TCTCACATCTCTATATTCACAGTA................................................2414.00402020
..................................................................................................TCTCACATCTCTATATTCACAGTT................................................2414.00401003
..................................................GTGAGTATC-GGGTTGTGATTGGA................................................................................................2313.00301200
..................................................................................................TCTCACATCTCTATATTCACACC.................................................2313.00321000
.....................................................................................................CACATCTCTATATTCACA...................................................1813.00303000
..................................................................................................TCTCACATCTCTATATTCAA....................................................2012.00202000
...................................................................................................CTCACATCTCTATATTCACAA..................................................2112.00202000
..................................................................................................TCTCACATCTCTATATTC......................................................1812.00202000
..................................................GTGAGTATC-GGGTTGTGATTT..................................................................................................2112.00201010
..................................................................................................TCTCACATCTCTATATTCACAGTAA...............................................2512.00201010
..................................................................................................TCTCACATCTCTATATTCACC...................................................2112.00210001
..................................................................................................TCTCACATCTCTATATTCACG...................................................2112.00201010
..................................................................................................TCTCACATCTCTATATTCACAAT.................................................2312.00200002
..................................................................................................TCTCACATCTCTATATTCACAGGGC...............................................2512.00220000
..................................................................................................TCTCACATCTCTATATTCACT...................................................2112.00220000
.....................................................................................................CACATCTCTATATTCACAGT.................................................2012.00202000
....................................................................................................TCACATCTCTATATTCAC....................................................1811.00101000
...................................................................................................CTCACATCTCTATATTCACAAA.................................................2211.00101000
......................................................GTATC-GGGTTGTGATTGGC................................................................................................1911.00101000
.................................................................................................CTCTCACATCTCTATATTC......................................................1911.00101000
.......................................................................................................CATCTCTATATTCACAGT.................................................1811.00101000
..................................................GTGAGTATC-GGGTTGTGATTGA.................................................................................................2211.00100001
..................................................................................................TCTCACATCTCTATATTCACAGTAC...............................................2511.00101000
..................................................GTGAGTATC-GGGTTGTGATTGGCTC..............................................................................................2511.00100100
..................................................GTGAGTATC-GGGTTGTGATTGGAA...............................................................................................2411.00100100
.......GTGAAGATGAGATGAGAGAATTGGCG.........................................................................................................................................2611.00100010
..................................................GTGAGTATC-GGGTTGTGATTGGCT...............................................................................................2411.00100100
..................................................GTGAGTATC-GGGTTGTGA.....................................................................................................1811.00100010
...................................................................................................CTCACATCTCTATATTCACAGTT................................................2311.00101000
..................................................GTGAGTATC-GGGTTGTGATTGGG................................................................................................2311.00100100
...................................................TGAGTATC-GGGTTGTGATTGGT................................................................................................2211.00100001
..................................................GTGAGTATC-GGGTTGTGATTGGC................................................................................................2311.00100100
....................................................................................................TCACATCTCTATATTCACAC..................................................2011.00101000
..................................................................................................TCTCACATCTCTATATTCACACT.................................................2311.00101000
.................................................................................................CTCTCACATCTCTATATTCA.....................................................2011.00101000
........................................................ATC-GGGTTGTGATTGGCTC..............................................................................................1911.00100010
..................................................................................................TCTCACATCTCTATATTCAT....................................................2011.00101000
.....................................................................................................CACATCTCTATATTCACAC..................................................1911.00101000
....................................................GAGTATC-GGGTTGTGATTGG.................................................................................................2011.00101000
..................................................................................................TCTCACATCTCTATATTCACAGGC................................................2411.00100001
..................................................................................................TCTCACATCTCTATATTCAAT...................................................2111.00100010
...................................................................................................CTCACATCTCTATATTCACAC..................................................2111.00101000
...................................................................................................CTCACATCTCTATATTCA.....................................................1811.00101000
droVir3
CAGGAACGCGAGGATGAGATGCGCGAGCTCGCGCTAAAGCTGCGTCGTAGGTGAGTAAT-CAGTTGTGGGTGGCTTTT------T---GAA--AGCCCTCTCACATCTCTTTATTCACAGGCGGCGTGAGTTGCGGCACAAATATGGAACGCCGTCCAGCGGCAAACTCTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................TCTCACATCTCTTTATTCACAG..................................................22167997.006799712476497928114551510140544723121743116342255026125456640536818831454205921643282275213403964114214895261085974635840231167415467111934283331691113138204380167413324228217209230322241067138518892119155118138205233
..................................................................................................TCTCACATCTCTTTATTCACA...................................................21111458.0011458663320039161320102014783532112729034018228333161303302453182535735013756931412617679207110347612204300152158141978537201962001445769784411169914134521384262
..................................................................................................TCTCACATCTCTTTATTCACAGT.................................................2314576.0045767927181633266058091124218548134042261095348296180142161244212201902445385672582802211870043001001452847331855255010514810181863834041425816271720
..................................................GTGAGTAAT-CAGTTGTGGGTGG.................................................................................................2212028.002028111964167774114146190004002520001110055600022600490120762300000000000000000001097868302400200206031000
..................................................................................................TCTCACATCTCTTTATTCAC....................................................2011643.001643127454103200000012153823562673537231123243822686951831542773477600000010100000111131350004569142063101399
...................................................................................................CTCACATCTCTTTATTCACAG..................................................2111209.00120900943200100000007210000033441014125597040421000000000010000000000010813201065622100010
...................................................................................................CTCACATCTCTTTATTCACAGT.................................................221565.005650144313210020014212422511032221593031221771835361312160000000001101111200057071111138392627202900002
..................................................................................................TCTCACATCTCTTTATTCACAGA.................................................231493.00493016691000000000621421130237972727234390731090111012222203989742213101039231239872154213414
..................................................................................................TCTCACATCTCTTTATTCACAA..................................................221429.0042900117100000000102100011100198221212171328220188326230000000010000010010010017138114010100141611
...................................................................................................CTCACATCTCTTTATTCACA...................................................201356.00356003331000000000022012102002211220200000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTG..................................................................................................211304.0030473494171925001673112000000000000990079060030151000000000000000000002172900000100831011010
..................................................................................................TCTCACATCTCTTTATTCA.....................................................191195.0019503810000000000191373610714341113211562320206111000000000000000000113000400000202000000
....................................................................................................TCACATCTCTTTATTCACAG..................................................201165.00165006102010000000530400051102424422322011240000000000000000001010063200012011100010
..................................................................................................TCTCACATCTCTTTATTCACC...................................................211145.001458747002000000006302311530030117571401000001000000000000010000001000100000020000111
..................................................................................................TCTCACATCTCTTTATTCACAT..................................................221145.0014500800000000100212361381118581361421223010221000000000000000000031000201000002100000
..................................................................................................TCTCACATCTCTTTATTCACAC..................................................221140.0014011428400000000000000100020321031465930121300000000000000010000100002941221002100110
..................................................................................................TCTCACATCTCTTTATTCACAGTT................................................241131.00131001411110000010621412342642127951612100052000000000010000000001207810120000010000
.................................................................................................CTCTCACATCTCTTTATTCACAG..................................................231112.001120035000000000003011000100120838611540510400000000000000000000000000300100000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGGT................................................................................................231103.0010300313430012120000000000010002100010300009100000000000000000001513100000000000000000
.....................................................................................................CACATCTCTTTATTCACAG..................................................19183.0083003800000000000000100001021210001100001000000000000000000000000003300000001000000
...................................................................................................CTCACATCTCTTTATTCACAGA.................................................22167.0067101210100000000310000000011352002100000000000000011100100003100051010110110210110
..................................................................................................TCTCACATCTCTTTATTCACAGTAA...............................................25162.006200400000000000000000000152430000702311400000000000000000000000006221100000011002
..................................................................................................TCTCACATCTCTTTATTCACAGTA................................................24158.00580060000000000000000000003432630020112200000010000000000000001000310021130500032
..................................................GTGAGTAAT-CAGTTGTGGGTGT.................................................................................................22156.005600302220001105000000000000210000010010310000000000000000000511800000300000010201
....................................................................................................TCACATCTCTTTATTCACA...................................................19151.005100280000000000031012401201000000200200100000000000000000000001000200000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGAA................................................24150.00500010000000000010000001002430131421022100000000000000000000000005312003112000021
...................................................TGAGTAAT-CAGTTGTGGGTGG.................................................................................................21149.004900191010104400300000000000010000002000000000000000000000000010300000300000011103
..................................................................................................TCTCACATCTCTTTATTCACAAA.................................................23142.004200120000000000000000000012200054300104100000000000000000000000004100000000011000
...................................................................................................CTCACATCTCTTTATTCAC....................................................19140.004000380000000000000001000000000010000000000000000000000000000000000000000000000000
......................................................................................................ACATCTCTTTATTCACAG..................................................18137.003700150010000000000000000100040021100120100000000000000000000000000800000000000000
...................................................................................................CTCACATCTCTTTATTCACAGTT................................................23131.00310030200000000010100201012023120100000011000000010000000000001000300001000100000
..................................................GTGAGTAAT-CAGTTGTGGGT...................................................................................................20129.00290061130000100200000000000010000000001011000000000000000000011600000000100020000
.................................................................................................CTCTCACATCTCTTTATTCACA...................................................22128.00280090000000000011000001100212141200000000000000000000000000002000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGGA................................................................................................23124.00240020000001700000100000000010000001000000000000000000000000020900000000000000000
..................................................................................................TCTCACATCTCTTTATTC......................................................18123.00230610000000000000210100100000122300110000000000000000000001000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCAA....................................................20123.00230090000000000000000001002020010100201100000000000000000000000000210000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGGC................................................................................................23122.002200010000021000000000000000000000000000000000000000000000000411300000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGC.................................................23122.00220032200000000000000000001222100212000001100000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGAAA...............................................25118.00180020000000000000000000002111000020002100000000000000000000000003011001000000000
.....................................................................................................CACATCTCTTTATTCACA...................................................18118.001800130000000000020000000001000010100000000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGG.................................................23117.00170080100000000000000000000100010000000001000000000000000000000002000000011100000
....................................................................................................TCACATCTCTTTATTCACAGT.................................................21116.00160060100000000000001010021000010001000020000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACATT.................................................23116.00160000010010000021020002040000000002000001000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACAA..................................................21115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGA.................................................................................................22113.00130010001001000000000000000001000000000000000000000000000000021600000000000000000
..................................................GTGAGTAAT-CAGTTGTGGG....................................................................................................19112.00120120010000000000010010000000000000001010000000000000000000010100000000100010000
..................................................................................................TCTCACATCTCTTTATTCACACA.................................................23111.00110010000000000000000000001101010010110000000000000000000000000002000100000000000
..................................................................................................TCTCACATCTCTTTATTCACAAAA................................................24111.00110020000000000000000000000111011110101000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGTTA...............................................25111.00110000000000000000000000001111000000120000000000000000000000000000010100200000000
..................................................................................................TCTCACATCTCTTTATTCAG....................................................2018.0080010000000000010000000001010011100000100000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACC...................................................2018.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTT..................................................................................................2118.0080011000000010000000000000001000101000000000000000000000000000200000000000000000
...................................................TGAGTAAT-CAGTTGTGGGTGGA................................................................................................2218.0080000001000000000000000000000000000000000000000000000000000001500000000000001000
..................................................................................................TCTCACATCTCTTTATTCACACC.................................................2317.0070010000000000000000000001000100000000000000000000000000000000000001011000000100
..................................................GTGAGTAAT-CAGTTGTGGGTGGTC...............................................................................................2416.0060000000001000000000000000000000001000000000000000000000000000400000000000000000
..................................................................................................TCTCACATCTCTTTATTCACT...................................................2116.0060110000000000000000010101000000000100000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACG...................................................2116.0060100000000000001000001000000000200001000000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACAGTA................................................2315.0050010000000000000001000000001000010000000000000000000000000000000000000000100000
...................................................TGAGTAAT-CAGTTGTGGGTGGT................................................................................................2215.0050000000002100000000000000000000000000000000000000000000000000200000000000000000
.......................................................................................................CATCTCTTTATTCACAGT.................................................1815.0050030000000000000000000010000000000000100000000000000000000000000000000000000000
...................................................TGAGTAAT-CAGTTGTGGGTG..................................................................................................2015.0050040000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACACC.................................................2214.0040020000000000000000000000000000000000000200000000000000000000000000000000000000
.................................................................................................CTCTCACATCTCTTTATTCACAGT.................................................2414.0040010000000000000000000000000010100001000000000000000000000000000000000000000000
.................................................................................................CTCTCACATCTCTTTATTCAC....................................................2114.0040020000000000000110000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACAGC.................................................2214.0040001000000000000000000000000000100000000000000000000000000000001000010000000000
...................................................................................................CTCACATCTCTTTATTCACAC..................................................2114.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGTTC...............................................2514.0040000000000000000000000000000102100000000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGTG................................................2413.0030010000000000000000000000000000000000000000000000000000000000001000000000000001
................................................................................................CCTCTCACATCTCTTTATTCACAG..................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCACATCTCTTTATTCACAA..................................................2013.0030020000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................GAGTAAT-CAGTTGTGGGTGG.................................................................................................2013.0030021000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGTTT...............................................2513.0030010000000000000000000000000000100000000000000000000000000000000000000000010000
.....................................................................................................CACATCTCTTTATTCACAA..................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGC.................................................................................................2213.0030001000001000000000000000000000000000000000000000000000000010000000000000000000
..................................................................................................TCTCACATCTCTTTATTCACACT.................................................2323.0060000000000000000000000001000100000000000000000000010000000000000000100020000000
..................................................................................................TCTCACATCTCTTTATTCACCC..................................................2213.0030020000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGG.....................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000001000000000100000100
..................................................................................................TCTCACATCTCTTTATTCACAGGT................................................2413.0030010000000000000000000000000001000000000000000000000000000000000000000100000000
..................................................................................................TCTCACATCTCTTTATTCAGT...................................................2113.0030000000000000000000000000001000000010001000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACAGAAA...............................................2412.0020001000000000000000000000000000000000000000000000000000000000001000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTC..................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000200000000000000000
...................................................................................................CTCACATCTCTTTATTCACAGAA................................................2312.0020010000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................ACATCTCTTTATTCACAGT.................................................1912.0020000100000000000000000000000010000000000000000000000000000000000000000000000000
..................................................GTGAGTAAT-CAGTTGTGGGTGTA................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000010100000000000000000
..................................................................................................TCTCACATCTCTTTATTCACAGGCCCG.............................................2712.0020000000000000000000000000000010000000010000000000000000000000000000000000000000
....................................................................................................TCACATCTCTTTATTCACAT..................................................2012.0020000000000000001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................CTCACATCTCTTTATTCACATT.................................................2212.0020000000000000000000010010000000000000000000000000000000000000000000000000000000
droMoj3
CAGGAGCGCGAGGACGAGATGCGCGAGCTGGCGCTCAAGCTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTCTA------G-----TGAAGCCCTCTCACATCTCTTTATTCACAGGCGGCGAGAGTTGCGCCACAAGTACGGCACGCCGTCCAGTGGCAAGCTCTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................TCTCACATCTCTTTATTCACAG..................................................22119883.001988314055623282325455642
..................................................................................................TCTCACATCTCTTTATTCACA...................................................2117296.00729648303736783192320
..................................................................................................TCTCACATCTCTTTATTCAC....................................................2011753.0017538034917178670
..................................................................................................TCTCACATCTCTTTATTCACAGT.................................................2311519.001519549419513464159
..................................................GTGAGTAAT-CAGTTGTGGGTGG.................................................................................................2211455.0014551122442349301726
...................................................................................................CTCACATCTCTTTATTCACAG..................................................2111218.0012181183122291
...................................................................................................CTCACATCTCTTTATTCACA...................................................201452.00452437000150
..................................................................................................TCTCACATCTCTTTATTCACAA..................................................221231.00231195200340
..................................................................................................TCTCACATCTCTTTATTCACAC..................................................221209.00209535021490
...................................................................................................CTCACATCTCTTTATTCACAGT.................................................221185.0018574749856
..................................................GTGAGTAAT-CAGTTGTGGGTG..................................................................................................211179.001793428845649
..................................................................................................TCTCACATCTCTTTATTCACAGA.................................................231179.0017979101980
..................................................................................................TCTCACATCTCTTTATTCACAGC.................................................231168.00168223031400
..................................................GTGAGTAAT-CAGTTGTGGGTGGT................................................................................................231145.0014589244118
....................................................................................................TCACATCTCTTTATTCACAG..................................................20199.009974423160
..................................................GTGAGTAAT-CAGTTGTGGGTGT.................................................................................................22187.0087313331649
...................................................................................................CTCACATCTCTTTATTCAC....................................................19172.00726700050
.................................................................................................CTCTCACATCTCTTTATTCACAG..................................................23168.006837110290
..................................................................................................TCTCACATCTCTTTATTCACAGTT................................................24155.005519294210
..................................................................................................TCTCACATCTCTTTATTCA.....................................................19148.00488737230
...................................................................................................CTCACATCTCTTTATTCACAGA.................................................22146.004618100270
..................................................GTGAGTAAT-CAGTTGTGGGTGGC................................................................................................23136.00362200725
..................................................................................................TCTCACATCTCTTTATTCACC...................................................21133.00332801040
.....................................................................................................CACATCTCTTTATTCACAG..................................................19132.00322411060
....................................................................................................TCACATCTCTTTATTCACA...................................................19131.00312140060
.................................................................................................CTCTCACATCTCTTTATTCACA...................................................22129.002915000140
..................................................................................................TCTCACATCTCTTTATTCAA....................................................20126.00262410010
..................................................................................................TCTCACATCTCTTTATTCACAGTA................................................24126.00266000200
..................................................GTGAGTAAT-CAGTTGTGGGT...................................................................................................20126.00263011120
..................................................................................................TCTCACATCTCTTTATTCACG...................................................21122.00220000220
..................................................................................................TCTCACATCTCTTTATTCACAT..................................................22121.0021625350
...................................................................................................CTCACATCTCTTTATTCACAGC.................................................22120.00205000150
..................................................................................................TCTCACATCTCTTTATTCACAGTAA...............................................25120.00201400060
...................................................TGAGTAAT-CAGTTGTGGGTGG.................................................................................................21119.00191520101
..................................................GTGAGTAAT-CAGTTGTGGGTGGA................................................................................................23118.00181001115
...................................................................................................CTCACATCTCTTTATTCACAA..................................................21115.00151500000
......................................................................................................ACATCTCTTTATTCACAG..................................................18113.0013800050
.....................................................................................................CACATCTCTTTATTCACA...................................................18112.0012410070
..................................................................................................TCTCACATCTCTTTATTCACAGG.................................................23111.0011800030
..................................................GTGAGTAAT-CAGTTGTGGG....................................................................................................19110.0010200053
...................................................................................................CTCACATCTCTTTATTCACAGTT................................................23110.0010202150
....................................................................................................TCACATCTCTTTATTCAC....................................................1819.009600030
..................................................................................................TCTCACATCTCTTTATTCACAAA.................................................2319.009900000
...................................................TGAGTAAT-CAGTTGTGGGTGGT................................................................................................2219.009110007
..................................................GTGAGTAAT-CAGTTGTGGGTT..................................................................................................2118.008030005
..................................................GTGAGTAAT-CAGTTGTGGGTGGTC...............................................................................................2418.008000008
..................................................GTGAGTAAT-CAGTTGTGGGTGC.................................................................................................2217.007000142
..................................................................................................TCTCACATCTCTTTATTCACACC.................................................2317.007000070
..................................................GTGAGTAAT-CAGTTGTGGGTGA.................................................................................................2217.007000034
..................................................................................................TCTCACATCTCTTTATTCACACT.................................................2316.006300030
..................................................................................................TCTCACATCTCTTTATTCACAGAA................................................2416.006400020
....................................................................................................TCACATCTCTTTATTCACAGT.................................................2116.006100230
.....................................................................................................CACATCTCTTTATTCACAGT.................................................2016.006200040
.................................................................................................CTCTCACATCTCTTTATTCAC....................................................2115.005100040
...................................................................................................CTCACATCTCTTTATTCACAAA.................................................2214.004300010
...................................................TGAGTAAT-CAGTTGTGGGTGGA................................................................................................2214.004020002
......................................................................................................ACATCTCTTTATTCACAGT.................................................1914.004100120
..................................................................................................TCTCACATCTCTTTATTC......................................................1814.004300010
..................................................GTGAGTAAT-CAGTTGTGGGTGTA................................................................................................2314.004030010
...................................................................................................CTCACATCTCTTTATTCACC...................................................2014.004400000
..................................................GTGAGTAAT-CAGTTGTGGGTGGCT...............................................................................................2414.004110002
..................................................................................................TCTCACATCTCTTTATTCACAAAA................................................2413.003300000
.................................................................................................CTCTCACATCTCTTTATTCACAGT.................................................2413.003200010
....................................................GAGTAAT-CAGTTGTGGGTGG.................................................................................................2013.003100011
.................................................................................................CTCTCACATCTCTTTATTCACAGA.................................................2413.003000030
..................................................................................................TCTCACATCTCTTTATTCACATT.................................................2313.003001110
..................................................GTGAGTAAT-CAGTTGTGGGTGGTA...............................................................................................2413.003020100
..................................................................................................TCTCACATCTCTTTATTCACT...................................................2113.003001020
...................................................................................................CTCACATCTCTTTATTCACAC..................................................2113.003200010
..................................................GTGAGTAAT-CAGTTGTGGGTGTT................................................................................................2312.002010001
..................................................................................................TCTCACATCTCTTTATTCACACA.................................................2312.002100010
.......................................................................................................CATCTCTTTATTCACAGC.................................................1812.002000020
...................................................................................................CTCACATCTCTTTATTCAA....................................................1922.004400000
..................................................................................................TCTCACATCTCTTTATTCACAGTTA...............................................2512.002100010
...................................................TGAGTAAT-CAGTTGTGGGTGT.................................................................................................2112.002000011
...................................................TGAGTAAT-CAGTTGTGGGTGGC................................................................................................2212.002010010
....................................................................................................TCACATCTCTTTATTCACAGA.................................................2112.002110000
..................................................................................................TCTCACATCTCTTTATTCACGC..................................................2212.002100010
.......................................................................................................CATCTCTTTATTCACAGT.................................................1812.002000020
..................................................GTGAGTAAT-CAGTTGTGGGTTT.................................................................................................2212.002000002
droGri2
CAGGAGCGCGAGGATGAGATGCGCGAACTGGCGCTGAAATTGCGGCGCAGGTGAGTAAT-CAGTTGTGGGTGGCTTTTGTTCTTA-GGGAA--AGCCCTCTCACATCTCTTTATTCACAGGCGGCGCGAATTGCGCCACAAATATGGAACGCCCTCCAGTGGCAAACTCTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................TCTCACATCTCTTTATTCACAG..................................................221699.006996954
..................................................................................................TCTCACATCTCTTTATTCACA...................................................211469.004694672
..................................................GTGAGTAAT-CAGTTGTGGGTGG.................................................................................................221105.001052877
..................................................................................................TCTCACATCTCTTTATTCAC....................................................20185.0085850
...................................................................................................CTCACATCTCTTTATTCACAG..................................................21167.0067661
...................................................................................................CTCACATCTCTTTATTCACA...................................................20144.0044440
..................................................................................................TCTCACATCTCTTTATTCACAGT.................................................23132.0032302
..................................................................................................TCTCACATCTCTTTATTCA.....................................................19112.0012120
..................................................................................................TCTCACATCTCTTTATTCACAC..................................................22111.0011110
...................................................................................................CTCACATCTCTTTATTCAC....................................................1918.00880
...................................................................................................CTCACATCTCTTTATTCACAGT.................................................2216.00651
..................................................GTGAGTAAT-CAGTTGTGGGTG..................................................................................................2116.00642
....................................................................................................TCACATCTCTTTATTCACAG..................................................2016.00660
..................................................GTGAGTAAT-CAGTTGTGGGT...................................................................................................2014.00413
....................................................................................................TCACATCTCTTTATTCACA...................................................1914.00440
...................................................................................................CTCACATCTCTTTATTCACAGTT................................................2314.00440
..................................................GTGAGTAAT-CAGTTGTGGGTGT.................................................................................................2213.00303
..................................................GTGAGTAAT-CAGTTGTGGGTT..................................................................................................2113.00321
..................................................GTGAGTAAT-CAGTTGTGGGTGGC................................................................................................2313.00312
...................................................TGAGTAAT-CAGTTGTGGGTGG.................................................................................................2112.00211
...................................................................................................CTCACATCTCTTTATTCACAGA.................................................2212.00220
......................................................................................................ACATCTCTTTATTCACAG..................................................1812.00220
..................................................GTGAGTAAT-CAGTTGTGGG....................................................................................................1912.00211
..................................................................................................TCTCACATCTCTTTATTCACAGA.................................................2312.00220
.....................................................................................................CACATCTCTTTATTCACAG..................................................1912.00220
..................................................................................................TCTCACATCTCTTTATTC......................................................1812.00220
.................................................................................................CTCTCACATCTCTTTATTCACAG..................................................2312.00220
..................................................GTGAGTAAT-CAGTTGTGGGTTT.................................................................................................2212.00202
..................................................................................................TCTCACATCTCTTTATTCACAA..................................................2212.00220
..................................................GTGAGTAAT-CAGTTGTGGGTGGCT...............................................................................................2411.00110
..................................................................................................TCTCACATCTCTTTATTCACAGTA................................................2411.00110
..................................................GTGAGTAAT-CAGTTGTGGGTGGA................................................................................................2311.00101
..................................................GTGAGTAAT-CAGTTGTGGGTGTA................................................................................................2311.00101
................................................................................................CCTCTCACATCTCTTTATTCACAG..................................................2411.00110
..................................................................................................TCTCACATCTCTTTATTCACAGAA................................................2411.00110
.................................................................................................CTCTCACATCTCTTTATTCACA...................................................2211.00110
..................................................................................................TCTCACATCTCTTTATTCACAAA.................................................2311.00110
..................................................................................................TCTCACATCTCTTTATTCACATTG................................................2411.00110
..................................................................................................TCTCACATCTCTTTATTCACAT..................................................2211.00110
..................................................GTGAGTAAT-CAGTTGTGGGTGGCA...............................................................................................2411.00101
...................................................TGAGTAAT-CAGTTGTGGGTGGT................................................................................................2211.00101
.....................................................................................................CACATCTCTTTATTCACA...................................................1811.00110
...................................................................................................CTCACATCTCTTTATTCACAGC.................................................2211.00110
..................................................................................................TCTCACATCTCTTTATTCACAGTAA...............................................2520.50110

Generated: 10/20/2015 at 07:25 PM