ID:

dse_545

 Coordinate:

scaffold_0:16380831-16380981 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dsec_GLEANR_9129:3]; CDS [Dsec\GM26228-cds]; intron [Dsec\GM26228-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCACAGACACCGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCGGATCTCCAGATGATAGCCGCTGCTACTGAGATACAATCCTCGAGAATCCAACACAACAATCTCGAGTTGCTGAGCTTCCAACTAATTTGAATGCTGCAAAATTCACGAATGGCACACGCATTTAAAAGCAAATTTCATACTGGAATGGGTGATATTTTGGAACGCCCTTATATACTATATCTATATAGGC
**************************************************((((.(((.((((((.......)))..))))))))))((((((......(((((((..............)))))))(((((..............((((((((((((..............)))...))))))))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 M054
female body
 V115
head
..................................................................................................................................................................................................................TGATATTTTGGAACGCCCTTAT................... 22 0 1 3.00 3 0 1 1 1
..................................................................................................................................................................................................................TGATATTTTGGAACGCCCTTATAT................. 24 0 1 3.00 3 3 0 0 0
......................GATGAGCTCCAGTGCCCTTAGC............................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................................TGATATTTTGGAACGCCTTTATAT................. 24 1 1 1.00 1 1 0 0 0
........ACCGAATGCGACCGGATGAGCTCCAGT........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
.CACAGACACCGAATGCGACCGGAT.................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........ACCGAATGCGACCGGATGAGC.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................TGATATTTTGGAACGCCCTTATA.................. 23 0 1 1.00 1 0 0 1 0
........ACCGAATGCGACCGGATGA................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................TGATATTTTGGAACGCCCTT..................... 20 0 1 1.00 1 0 0 0 1
.....................................................................................................................................................................................................ATACTGGTACGGGTGATGTTT................................. 21 3 2 0.50 1 0 1 0 0
.............TTGCGACCGTATGAGCTCG........................................................................................................................................................................................................................... 19 3 10 0.10 1 0 0 1 0

Anti-sense strand reads

AGTGTCTGTGGCTTACGCTGGCCTACTCGAGGTCACGGGAATCGCTCTACCATCCATCAGCCTAGAGGTCTACTATCGGCGACGATGACTCTATGTTAGGAGCTCTTAGGTTGTGTTGTTAGAGCTCAACGACTCGAAGGTTGATTAAACTTACGACGTTTTAAGTGCTTACCGTGTGCGTAAATTTTCGTTTAAAGTATGACCTTACCCACTATAAAACCTTGCGGGAATATATGATATAGATATATCCG
**************************************************((((.(((.((((((.......)))..))))))))))((((((......(((((((..............)))))))(((((..............((((((((((((..............)))...))))))))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V113
male body		 V114
embryo
...........CGAACGCTGGCATACTCGAG............................................................................................................................................................................................................................ 20 3 3 0.67 2 1 1 0
...............................................................................CGACGAAGACTCTATTGTAGGA...................................................................................................................................................... 22 3 2 0.50 1 1 0 0
...........................................................................................................................................GTTGATTAAAGTTACGAAGT............................................................................................ 20 2 4 0.25 1 0 0 1
...........................................................................................................................................GTTGATTAAAGTTACGAAG............................................................................................. 19 2 7 0.14 1 0 1 0
.....................................................................................................................................TCGCAGGTCGAGTAAACTT................................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_0:16380781-16381031 + dse_545 TCACAGACACCGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGAT-----------------------------------------------------------G---------------ATA-GCCGCTGCTACTGAGATAC-----AATC--CTCGAGAATCCAACACAACAATCTCGA--GT------------------------TGCTGAGCTTC---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AT-----GG--CACA--CGCAT--TTA-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTGGAATGGGTGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTTATATAC---TATATCTATAT--------------------------AGGC
droSim2 3r:15510196-15510438 + dsi_9669 TCACAGACACCGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGAT-----------------------------------------------------------G---------------ATA-GCCGCTGCTACTGAGATAT-----AATC--CTCGAGACTCCAA--------TCTCGA--GT------------------------TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CGCAT--TTT-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTGGAATGGGTGATATTTT-GGAACTT-----------------------------------------------------------------C-------------------------------------------------------------------CTTATATAC---TATATTTATAT--------------------------AGGC
dm3 chr3R:5515936-5516203 - TCACAGACACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAAGTAGTCG----GATCTACAGAT-----------------------------------------------------------G---------------ATAAACCGCTGGTACTGAGAT-------AATT--CTCGAGACTCCAACACAACAATCCCGA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CGCAT--TTA-----AA---ATCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTAGAATGGGTGATATTTT-AGAACTATTTTAGAA---------------------------------------------------------C-------------------------------------------------------------------CTTATATAT---TATATTTATAT--------------------------AGGC
droEre2 scaffold_4770:16081195-16081449 + TCACAGATACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTTCACAT-----------------------------------------------------------G---------------GTA-CCCGATGATTCTGAGATATCAAG-AATC--CTCAAGAATCCAACACAA---TCTCCA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAATTTCAC-----------GA-----------AA-----GG--CACA--CTCAT--TTA-----AA---AGTA-----------------------------A------AT------------------------------------------------------------------------------------------------TCATACTAGAATGGGTGATATTTC-AGACCTC-----------------------------------------------------------------C-------------------------------------------------------------------CTT---------TATATTCATAT--------------------------GGGG
droYak3 3R:9570185-9570438 - TCACAGACACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GGTCACCACAA-----------------------------------------------------------G---------------ATG-ACCGATGCTACTGAGAT-------ACTC--CTCGAGTATCCAACACAA---TCTCCA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CTCAC--TCA-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATTCTAGAATGGGTGATATTTT-GGACCTC-----------------------------------------------------------------C--------------------------------------------------------------------CCATAT-T---TATATTCATTT--------------------------GGGG
droEug1 scf7180000407136:169972-170220 + TCACAGATACAGAATGCGATAGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGGAGGCGATGA-----------------------------------------------------------------CGATA-----------ACG--------AAAACTT--CACGAGAATCAAACACGA---TCTCGA--ATTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----AG--CACA--CACAAACTC---------------------------------------------------ATT-----------------------------------------------------------------------------------------------TCATAATAGGATGGTAGATATTTCTTGACCATT-----------------------------------------------------------------------------------AGCTT-AT--------------CCAAAG-----------GC------------------T--------AGGT--------------------------AAAG
droBia1 scf7180000302402:3002428-3002674 - TCACAGACACAGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGCCTCCA-GATCTTCGGGGAGCCATG-------------------------------------------------------------------------------------------------------AGGAGACTCCAACCAGG---TCCCGA--ATCCAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------AC-----------AA------G--CACA----ACA--ATT-----TC---A----------------------------------------------------------------------------------------------------TTTAAAATTAAAATGGAACATGGAGATGAGTTCCATTTTAGGCTAGGATGGGTGATGTTTC-AGAACTC-----------------------------------------------------------------T-------------------------------------------------------------------TTTA-------------------------------------------------
droTak1 scf7180000415653:564567-564834 - TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCG-GAT------GAGG-----------------------------------------------------------------AGA-----------AAG--------AAAGCTA--CACGAGAATCCAACACGA---TCCCGA--ATCTAAAG------AG-----AC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------AA-----------AA-----AG--CACA--CACAT--TCATTTACCAA--A-------------GA--AAGTAGAA----------------------------------------------------------------------------------------------------ATA--TTCCATTATTTTTTAAGATGGGTGATAT-------ACAT---------------------------------------------------------------------------------------------------------TTTTAAATATTTTTAT--GC--C-----CGT-------T----A--CTCGT--------------------------AGAG
droEle1 scf7180000491047:120209-120481 + TTACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCGGGAGGCTAG---------------------------------------------------------------------------CGCT----CCGAGAA-------ACAG--CACGAGAATCCAACACGA---TCCCGA--ATTTAA---------G-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAAGTCAC-----------AA-----------AA-----AGAGCACTTACACAT--CCATT-ACAA---AACA-----------------------------A------AA--C----AAT--------------------------------------------------------------------------------------T--GGTCAGGATGGGTGATATTTC-AGACCATTTTCAATACTT------------------------------------------------------CTTTTTACTCTACTTTG------------------------------------------------------------------ATCTGTTA--------------------------AGCA
droRho1 scf7180000777865:298754-299080 - TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAAGAGGCGATGA-----------------------------------------------------------------TGATA------------------------AACGG--CAGGAGAATCCAACACGA---TCCCGA--ATTTAA---------G-----GC---GGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAAGTCAC-----------AAG----------AA-----AG--CACTTACACAT--CCATTTA-CAAA-A-------------AATTAAGGAC----A----A----------------------------------------------------------------------------------------G---ATG--TTCCATTTCTTACCAAGATGGGTGATATTTC-AGACCTTT-GCAATG---TATTAAATTAATACAATGAAAAATTTAAATGTTTATTATTCATTATAATAATAT-----------------TTAGCTTTAT----------------------------------------------------------GTAACT--------------------------AGGC
droFic1 scf7180000454104:1325140-1325400 + TCACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GCTGTCCAGGAGGCGGT----------ATCCCG-------------------------------------------------------A-----------ATA--------AAAACAG--CACGAGAGTCCAACACGA---ACCCGA--TTTTGAGG------CG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCAGC--AAAACTCAC-----------AC-----------AA-----CA--CACC--CACAC--TAT-T-CCCAAAAAATAA-A---------CTAGGAGC----A----A----------------------------------------------------------------------------------------G---GTG--CTCCACTTCGTACGAAGATCGGTGATATTTT-AAAA-------------------------------------------------------------------------------------------------------------------TATT--------------------------------------TC--------------------------AAGG
droKik1 scf7180000302461:169458-169804 + TCACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTCAGCGAGATGGTAGGTAGTAG----TGGCTCTAAC-------ATGGATCCCAAAGGCC--CAAT----------------------------AT---------------CCATA-TC--CAGC--AAC--------AAAAAAG--CACGAGAATCCAACACGA---TCCTGTTCTTTTTAAG------CG-----GC---TTTTGAGCTTG---CTACTAATTTGAATGCTGC--AAAGTAAAAAC---------AA-----------AA-----AG--CACA--CACCA----------------------------------------GCCATGAAAATCCACATTTCCACCATTTTCAACTGAACTGAGGGATATTTTTTTAAAACTACTCTGCAGAATATTATTTAAAATAATATTAGAACACTTTGA-----TTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAAAGCATATGTTC---TTTGTTGTTTT--------------------------AGGC
droAna3 scaffold_13250:53941-54219 - TCACAGACACCGAGTGCGACCGGATGAGTTCCAGTGCCCTCAGCGAGATGGTAGGTAGCTGTATGGATTTCCTCGAGCAGGA----------CTCCCTACTAAA----------------------------AAC---------C------ACA-----------ATG--------AGAACCG--CACGAGATGCCAACACAA---TCCCAA--GTTCTAAG------CT-----GC---TACTGAGCTTG---CTACTAATTTGAATGCTAC--AAGTTGCAC-C---------AA-----------AA-----AT--CACA--CACTA--TTT-----TC---ATGA-----------------------------T------TTTTC----ATT--------------------------------------------------------------------------------------TAGATATGAAATAAGCTATATTTT-TAAT-------------------------------------------------------------------------------------------------------------------TATT-----AT--A-------CATATTT---TATATATATATAA--------------------------AAGT
droBip1 scf7180000396413:609426-609704 - TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCGCTCAGCGAGATGGTAGGTAGCTGTG--TAGCTTCAGGAGCCGGA----------CTCTCTTCTAAA----------------------------AA----------C------ACA-----------ATG--------AGAACCG--CACGAGATGCCAACACAA---TCCCAC--GTTTTAAG------CT-----GC---TACTGAGCTTG---CTACTAATCTGAATGCTAC--AAGTTGCAC-----------AA-----------CA-----GT--CCCA--CACAA--ATT-----TC---ATTA-----------------------------T------TTTTC----ATT--------------------------------------------------------------------------------------TAAGAATGAAATAAGCTATATTTT-AAAT-------------------------------------------------------------------------------------------------------------------TATG-----AA--TCAGATTTCTTATG--A---TTTGTTTTT-A--------------------------AAGG
dp5 2:5542275-5542503 + TCACAGACACCGAGTGTGATCGCATGAGCTCCAGTGCACTGAGCGAAATGGTATGTACGGG----CAGATCCAATAGCT-------ATACTT-------------------------------------------GGCATCCTCGGTAACCGT-------------------------AACCGTAA---------CAAAGCGA---TCCCAA--CACAAAAG------CG-----GC---TGCTGTTCTTG---CTACTAATTCGAATGCTCCGCACACTATAC-----------AT--------ATGTACATATATGGCACC-----------A-----AT---ACTA-----------------------------T------ACC-----------------------------------------------------------------------------------------------CCACAC----------------------------------------------------------------------------------------------------------TGTTCACTTTGGC--------------------------------------------------------------A--------------------------GAGG
droWil2 scf2_1100000004902:10776343-10776654 - TCACAGACACCGAATGCGATCGCATGAGCTCCAGTGCAATGAGTGATATGGTATGTACATCCC--------AAAAAAACG---AATCTAAAAGGTTCC-CCAATTCTGCAAGATGATCACGACTTCAGAGCA------------------------------------------------------------------------------------TACAAGGAGTTGTT-----GCTGCCGCACAAGCTA---ATACTAATTTGAATGCCCC--ATCATACAC-----------AC----------ACA-----------AA--CACAC--TTT-----TC---CTAA-----------------------------T------CCTTCCACAAATCTCACAGGCCATAAAGTATAT-----------------------------------------------------------------CCAGTTGAGATAGGAAAAAACTTG-TGA------------------------------------------------------------------------------------------------------------------------------A--A-------AACAAATTC---TGAGTCGTTTGAGACTCAGAAACCATTAATTGAGTTAGTGC
droVir3 scaffold_12822:1317320-1317484 - TTACAGACACCGAATGCGATCGCATGAGCTCCAGTGCGCTTAGCGACATGGTAGGTGCGGGGG--CGACTCTAGG------------------GTATC-CCTAATCTATGGTCGGGTCA--ACTGAATGGCATAC---------G------GCA-----------CCA--------GGAAGCGTAA-------------------------------TACAG------CT-----GC---TCCTGCGCCTG---CTACTAATACGAATGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:33934220-33934536 - TTACAGACACCGAATGCGATCGCATGAGCTCCAGCGCACTCAGCGACATGGTAGGTGGAGATA----AAATA----AGT---GCGGGTAGGGTGGGCC-TCAAT----------------------------TAC---------T------GCA-----------CCT--------AGAAGCA--CTGCAGCTGCCATCCAGC---TCCTGC--TCCTGC---------T-----CC---TGCTACAGCTGCAACTACTAATATGAATGCCTAGCTATC-TTACAC---------TC----------ATA-----CG--CACA--GAGAA--AAA-T-C-CAAAAGTTAAATTTTAAAGCA--AACTGGAACTGTGTTTA-------------------------------------------------------------------------------------------------TCCACAAT---------------------------------------------------------------------------------------------TT-----------------TTTGCTTTATGAGAGGAATATTTTTCTGAGCGTA-----------------GACACATACACGCATACACACAT--------------------------TAAC
droGri2 scaffold_8919:771-937 - TCACAGACACCGAATGCGACCGCATGAGCTCCAGTGCGCTCAGCGACATGGTATGTGGCCC----AGT--TCAGG----------------------------------------------------------------------------------------------------------------------------------------------CCAAG------CAGACTTAC---AACTGCTCCTG---CTACTAATCTGAATGCTCAGCAAAC-AAATACACACGCTACAATCACACACATCCA-----------CA--CACAC--TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ACAC--------------------------ATAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TCACAGACACCGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGAT-----------------------------------------------------------G---------------ATA-GCCGCTGCTACTGAGATAC-----AATC--CTCGAGAATCCAACACAACAATCTCGA--GT------------------------TGCTGAGCTTC---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AT-----GG--CACA--CGCAT--TTA-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTGGAATGGGTGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTTATATAC---TATATCTATAT--------------------------AGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTTAT................................................2213.0031101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTTATAT..............................................2413.0030030
......................GATGAGCTCCAGTGCCCTTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
........ACCGAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.CACAGACACCGAATGCGACCGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
........ACCGAATGCGACCGGATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTTATA...............................................2311.0011000
........ACCGAATGCGACCGGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTT-GGAACGC-----------------------------------------------------------------C-------------------------------------------------------------------CTT..................................................2011.0010001
droSim2
TCACAGACACCGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGAT-----------------------------------------------------------G---------------ATA-GCCGCTGCTACTGAGATAT-----AATC--CTCGAGACTCCAA--------TCTCGA--GT------------------------TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CGCAT--TTT-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTGGAATGGGTGATATTTT-GGAACTT-----------------------------------------------------------------C-------------------------------------------------------------------CTTATATAC---TATATTTATAT--------------------------AGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................GACCGGATGAGCTCCAGTGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
............AATGCGACCGGATGAGCTCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
.............ATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110000000000000
............AATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.......................ATGAGCTCCAGTGCCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
........ACCGAATGCGACCGGATGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..ACAGACACCGAATGCGACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.................GACCGGATGAGCTCCAGTGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGATATTTT-GGAACTT-----------------------------------------------------------------C-------------------------------------------------------------------CTTA.................................................2411.00100100000000000000
.................................GTGCCCTTAGCGAGATGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.................................................................................................................................................................................................................................................................CTAATTTGAATGCTGC--AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..........CGAATGCGACCGGATGAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
...........GAATGCGACCGGATGAGCTCCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTGATATTTT-GGAACTT-----------------------------------------------------------------C-------------------------------------------------------------------CTTAT................................................2711.00101000000000000000
TCACAGACACCGAATGCGACCGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
dm3
TCACAGACACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAAGTAGTCG----GATCTACAGAT-----------------------------------------------------------G---------------ATAAACCGCTGGTACTGAGAT-------AATT--CTCGAGACTCCAACACAACAATCCCGA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CGCAT--TTA-----AA---ATCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATACTAGAATGGGTGATATTTT-AGAACTATTTTAGAA---------------------------------------------------------C-------------------------------------------------------------------CTTATATAT---TATATTTATAT--------------------------AGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........GAATGCGACCGGATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2223.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2222.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000100001000000
...................................................TAAGTAGTCG----GATCTACAGAT-----------------------------------------------------------G---------------AT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000
..............................................GATGGTAAGTAGTCG----GATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
............AATGCGACCGGATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGCTCCAGTGCCCTTAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................TGAGCTCCAGTGCCCTTAGCGAGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGACCGGATGAGCTCCAGTGCCCTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ACTAATTTGAATGCTGC--AA........................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACTGAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACTGAATGCGACCGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................CCGGATGAGCTCCAGTGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCAACACAACAATCCCGA--GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGACCGGATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................GAGCTCCAGTGCCCTTAGCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........ACTGAATGCGACCGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........GAATGCGACCGGATGAGCTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
TCACAGACACTGAATGCGACCGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........ACTGAATGCGACCGGATGAGCTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGAATGCGACCGGATGAGCTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................TACTGAGAT-------AATT--CTCGAGACTCCAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGAATGGGTGATATTTT-AG...............................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................GATGAGCTCCAGTGCCCTTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................TAGCGAGATGGTAAGTAGTCG----GATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.CACAGACACTGAATGCGACCGGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........TGAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........GAATGCGACCGGATGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GACACTGAATGCGACCGGATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........GAATGCGACCGGATGAGCTCCAGTGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGAGCTCCAGTGCCCTTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............ATGCGACCGGATGAGCTCCAGTGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGAGCTCCAGTGCCCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TCAC-----------GA-----------AA-----GG--CACA--CGCAT--TTA-----A........................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....GACACTGAATGCGACCGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGACACTGAATGCGACCGGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....GACACTGAATGCGACCGGATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........ACTGAATGCGACCGGATGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGACCGGATGAGCTCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................CGCTGGTACTGAGAT-------AATT--C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............TGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATGCGACCGGATGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGAATGCGACCGGATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........CTGAATGCGACCGGATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................GTAAGTAGTCG----GATCTACAGAT-----------------------------------------------------------G---------------ATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AATTCAC-----------GA-----------AA-----GG--CACA--CGCA....................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................CCTTAGCGAGATGGTAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TCGAGACTCCAACACAACAATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACTGAATGCGACCGGATGAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATGGGTGATATTTT-AGAA.............................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGAGCTCCAGTGCCCTTAGCGAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............ATGCGACCGGATGAGCTCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........TGAATGCGACCGGATGAGCTCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......CACTGAATGCGACCGGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
TCACAGACACTGAATGCGACCGGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AATTCAC-----------GA-----------AA-----GG--CACA--CGC.....................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAATGCGACCGGATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCTTAGCGAGATGGTAAGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CACAGACACTGAATGCGACCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................GGATGAGCTCCAGTGCCCTTAGCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CACAGACACTGAATGCGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............TGCGACCGGATGAGCTCCAGTGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GATCTACAGAT-----------------------------------------------------------G---------------ATAAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAGCTCCAGTGCCCTTAGCGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACTGAATGCGACCGGATGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCGACCGGATGAGCTCCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ACCGCTGGTACTGAGAT-------AATT--CTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGACACTGAATGCGACCGGATGAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCACAGACACTGAATGCGACCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......CACTGAATGCGACCGGATGAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCACAGATACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTTCACAT-----------------------------------------------------------G---------------GTA-CCCGATGATTCTGAGATATCAAG-AATC--CTCAAGAATCCAACACAA---TCTCCA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAATTTCAC-----------GA-----------AA-----GG--CACA--CTCAT--TTA-----AA---AGTA-----------------------------A------AT------------------------------------------------------------------------------------------------TCATACTAGAATGGGTGATATTTC-AGACCTC-----------------------------------------------------------------C-------------------------------------------------------------------CTT---------TATATTCATAT--------------------------GGGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GAATGCGACCGGATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..............TGCGACCGGATGAGCTCCAGTGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....GATACTGAATGCGACCGGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
............................CTCCAGTGCCCTTAGCGAGATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
............AATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
................CGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTC-----------------------------------------------------------------C-------------------------------------------------------------------CTT---------TATATTCATAT--------------------------GGG.2411.0011000000
.....GATACTGAATGCGACCGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............TGCGACCGGATGAGCTCCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
droYak3
TCACAGACACTGAATGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GGTCACCACAA-----------------------------------------------------------G---------------ATG-ACCGATGCTACTGAGAT-------ACTC--CTCGAGTATCCAACACAA---TCTCCA--GTTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----GG--CACA--CTCAC--TCA-----AA---AGCA-----------------------------A------ATT-----------------------------------------------------------------------------------------------TCATTCTAGAATGGGTGATATTTT-GGACCTC-----------------------------------------------------------------C--------------------------------------------------------------------CCATAT-T---TATATTCATTT--------------------------GGGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........ACTGAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000020000
...............GCGACCGGATGAGCTCCAGTGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00211000000000
...........GAATGCGACCGGATGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
..............TGCGACCGGATGAGCTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............ATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
TCACAGACACTGAATGCGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......ACACTGAATGCGACCGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
....................................................................CACCACAA-----------------------------------------------------------G---------------ATG-ACCGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.CACAGACACTGAATGCGACCGGATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........GAATGCGACCGGATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
TCACAGATACAGAATGCGATAGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAGGAGGCGATGA-----------------------------------------------------------------CGATA-----------ACG--------AAAACTT--CACGAGAATCAAACACGA---TCTCGA--ATTTAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------GA-----------AA-----AG--CACA--CACAAACTC---------------------------------------------------ATT-----------------------------------------------------------------------------------------------TCATAATAGGATGGTAGATATTTCTTGACCATT-----------------------------------------------------------------------------------AGCTT-AT--------------CCAAAG-----------GC------------------T--------AGGT--------------------------AAAGSizeHit CountTotal NormTotal
No Reads
droBia1
TCACAGACACAGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGCCTCCA-GATCTTCGGGGAGCCATG-------------------------------------------------------------------------------------------------------AGGAGACTCCAACCAGG---TCCCGA--ATCCAAAG------AG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------AC-----------AA------G--CACA----ACA--ATT-----TC---A----------------------------------------------------------------------------------------------------TTTAAAATTAAAATGGAACATGGAGATGAGTTCCATTTTAGGCTAGGATGGGTGATGTTTC-AGAACTC-----------------------------------------------------------------T-------------------------------------------------------------------TTTA-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCG-GAT------GAGG-----------------------------------------------------------------AGA-----------AAG--------AAAGCTA--CACGAGAATCCAACACGA---TCCCGA--ATCTAAAG------AG-----AC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAATTCAC-----------AA-----------AA-----AG--CACA--CACAT--TCATTTACCAA--A-------------GA--AAGTAGAA----------------------------------------------------------------------------------------------------ATA--TTCCATTATTTTTTAAGATGGGTGATAT-------ACAT---------------------------------------------------------------------------------------------------------TTTTAAATATTTTTAT--GC--C-----CGT-------T----A--CTCGT--------------------------AGAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCGGGAGGCTAG---------------------------------------------------------------------------CGCT----CCGAGAA-------ACAG--CACGAGAATCCAACACGA---TCCCGA--ATTTAA---------G-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAAGTCAC-----------AA-----------AA-----AGAGCACTTACACAT--CCATT-ACAA---AACA-----------------------------A------AA--C----AAT--------------------------------------------------------------------------------------T--GGTCAGGATGGGTGATATTTC-AGACCATTTTCAATACTT------------------------------------------------------CTTTTTACTCTACTTTG------------------------------------------------------------------ATCTGTTA--------------------------AGCASizeHit CountTotal NormTotal
No Reads
droRho1
TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GATCTCCAAGAGGCGATGA-----------------------------------------------------------------TGATA------------------------AACGG--CAGGAGAATCCAACACGA---TCCCGA--ATTTAA---------G-----GC---GGCTGAGCTTG---CAACTAATTTGAATGCTGC--AAAAGTCAC-----------AAG----------AA-----AG--CACTTACACAT--CCATTTA-CAAA-A-------------AATTAAGGAC----A----A----------------------------------------------------------------------------------------G---ATG--TTCCATTTCTTACCAAGATGGGTGATATTTC-AGACCTTT-GCAATG---TATTAAATTAATACAATGAAAAATTTAAATGTTTATTATTCATTATAATAATAT-----------------TTAGCTTTAT----------------------------------------------------------GTAACT--------------------------AGGCSizeHit CountTotal NormTotal
No Reads
droFic1
TCACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTTAGCGAGATGGTAGGTAGTCG----GCTGTCCAGGAGGCGGT----------ATCCCG-------------------------------------------------------A-----------ATA--------AAAACAG--CACGAGAGTCCAACACGA---ACCCGA--TTTTGAGG------CG-----GC---TGCTGAGCTTG---CAACTAATTTGAATGCAGC--AAAACTCAC-----------AC-----------AA-----CA--CACC--CACAC--TAT-T-CCCAAAAAATAA-A---------CTAGGAGC----A----A----------------------------------------------------------------------------------------G---GTG--CTCCACTTCGTACGAAGATCGGTGATATTTT-AAAA-------------------------------------------------------------------------------------------------------------------TATT--------------------------------------TC--------------------------AAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TCACGGACACCGAGTGCGACCGGATGAGCTCCAGTGCCCTCAGCGAGATGGTAGGTAGTAG----TGGCTCTAAC-------ATGGATCCCAAAGGCC--CAAT----------------------------AT---------------CCATA-TC--CAGC--AAC--------AAAAAAG--CACGAGAATCCAACACGA---TCCTGTTCTTTTTAAG------CG-----GC---TTTTGAGCTTG---CTACTAATTTGAATGCTGC--AAAGTAAAAAC---------AA-----------AA-----AG--CACA--CACCA----------------------------------------GCCATGAAAATCCACATTTCCACCATTTTCAACTGAACTGAGGGATATTTTTTTAAAACTACTCTGCAGAATATTATTTAAAATAATATTAGAACACTTTGA-----TTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAAAGCATATGTTC---TTTGTTGTTTT--------------------------AGGCSizeHit CountTotal NormTotal
No Reads
droAna3
TCACAGACACCGAGTGCGACCGGATGAGTTCCAGTGCCCTCAGCGAGATGGTAGGTAGCTGTATGGATTTCCTCGAGCAGGA----------CTCCCTACTAAA----------------------------AAC---------C------ACA-----------ATG--------AGAACCG--CACGAGATGCCAACACAA---TCCCAA--GTTCTAAG------CT-----GC---TACTGAGCTTG---CTACTAATTTGAATGCTAC--AAGTTGCAC-C---------AA-----------AA-----AT--CACA--CACTA--TTT-----TC---ATGA-----------------------------T------TTTTC----ATT--------------------------------------------------------------------------------------TAGATATGAAATAAGCTATATTTT-TAAT-------------------------------------------------------------------------------------------------------------------TATT-----AT--A-------CATATTT---TATATATATATAA--------------------------AAGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..ACAGACACCGAGTGCGACCGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100001
.....GACACCGAGTGCGACCGGATGAGTTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002100001
.....................................................................................................................................AC---------C------ACA-----------ATG--------AGAACCG--CACGAGATGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGAAATAAGCTATATTT...................................................................................................................................................................................................2111.001010000
..................ACCGGATGAGTTCCAGTGCCCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....GACACCGAGTGCGACCGGATGAGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............AGTGCGACCGGATGAGTTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............GTGCGACCGGATGAGTTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................GACCGGATGAGTTCCAGTGCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
TCACAGACACCGAGTGCGACCGGATGAGCTCCAGTGCGCTCAGCGAGATGGTAGGTAGCTGTG--TAGCTTCAGGAGCCGGA----------CTCTCTTCTAAA----------------------------AA----------C------ACA-----------ATG--------AGAACCG--CACGAGATGCCAACACAA---TCCCAC--GTTTTAAG------CT-----GC---TACTGAGCTTG---CTACTAATCTGAATGCTAC--AAGTTGCAC-----------AA-----------CA-----GT--CCCA--CACAA--ATT-----TC---ATTA-----------------------------T------TTTTC----ATT--------------------------------------------------------------------------------------TAAGAATGAAATAAGCTATATTTT-AAAT-------------------------------------------------------------------------------------------------------------------TATG-----AA--TCAGATTTCTTATG--A---TTTGTTTTT-A--------------------------AAGGSizeHit CountTotal NormTotal
No Reads
dp5
TCACAGACACCGAGTGTGATCGCATGAGCTCCAGTGCACTGAGCGAAATGGTATGTACGGG----CAGATCCAATAGCT-------ATACTT-------------------------------------------GGCATCCTCGGTAACCGT-------------------------AACCGTAA---------CAAAGCGA---TCCCAA--CACAAAAG------CG-----GC---TGCTGTTCTTG---CTACTAATTCGAATGCTCCGCACACTATAC-----------AT--------ATGTACATATATGGCACC-----------A-----AT---ACTA-----------------------------T------ACC-----------------------------------------------------------------------------------------------CCACAC----------------------------------------------------------------------------------------------------------TGTTCACTTTGGC--------------------------------------------------------------A--------------------------GAGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................TCCAGTGCACTGAGCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030200100000
............................CTCCAGTGCACTGAGCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030200001000
............................CTCCAGTGCACTGAGCGAAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100001000
...............GTGATCGCATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
..ACAGACACCGAGTGTGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............GTGTGATCGCATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......................CATGAGCTCCAGTGCACTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................AAG------CG-----GC---TGCTGTTCTTG---CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.........CCGAGTGTGATCGCATGAGCTCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
.......CACCGAGTGTGATCGCATGAGCTCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.............GTGTGATCGCATGAGCTCCAGTGCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......CACCGAGTGTGATCGCATGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
..................ATCGCATGAGCTCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................CATGAGCTCCAGTGCACTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................GCATGAGCTCCAGTGCACTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................TCCAGTGCACTGAGCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................ATCGCATGAGCTCCAGTGCACTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........CGAGTGTGATCGCATGAGCTCCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................AACCGTAA---------CAAAGCGA---TCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
.CACAGACACCGAGTGTGATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................CCAGTGCACTGAGCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droWil2
TCACAGACACCGAATGCGATCGCATGAGCTCCAGTGCAATGAGTGATATGGTATGTACATCCC--------AAAAAAACG---AATCTAAAAGGTTCC-CCAATTCTGCAAGATGATCACGACTTCAGAGCA------------------------------------------------------------------------------------TACAAGGAGTTGTT-----GCTGCCGCACAAGCTA---ATACTAATTTGAATGCCCC--ATCATACAC-----------AC----------ACA-----------AA--CACAC--TTT-----TC---CTAA-----------------------------T------CCTTCCACAAATCTCACAGGCCATAAAGTATAT-----------------------------------------------------------------CCAGTTGAGATAGGAAAAAACTTG-TGA------------------------------------------------------------------------------------------------------------------------------A--A-------AACAAATTC---TGAGTCGTTTGAGACTCAGAAACCATTAATTGAGTTAGTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................CGCATGAGCTCCAGTGCAATGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300210
........................TGAGCTCCAGTGCAATGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................GCATGAGCTCCAGTGCAATGAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................CGATCGCATGAGCTCCAGTGCAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.CACAGACACCGAATGCGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................................................................................AGGAGTTGTT-----GCTGCCGCACAAGCTA---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...................TCGCATGAGCTCCAGTGCAATGAGTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...........GAATGCGATCGCATGAGCTCCAGTGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
droVir3
TTACAGACACCGAATGCGATCGCATGAGCTCCAGTGCGCTTAGCGACATGGTAGGTGCGGGGG--CGACTCTAGG------------------GTATC-CCTAATCTATGGTCGGGTCA--ACTGAATGGCATAC---------G------GCA-----------CCA--------GGAAGCGTAA-------------------------------TACAG------CT-----GC---TCCTGCGCCTG---CTACTAATACGAATGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................CGACATGGTAGGTGCGGGGG--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................GCTCCAGTGCGCTTAGCGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..ACAGACACCGAATGCGATCGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....AGACACCGAATGCGATCGCATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....................................GCTTAGCGACATGGTAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
............................................GACATGGTAGGTGCGGGGG--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
....................CGCATGAGCTCCAGTGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
....................CGCATGAGCTCCAGTGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................GTAA-------------------------------TACAG------CT-----GC---TCCTGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........GAATGCGATCGCATGAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
.TACAGACACCGAATGCGATCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TTACAGACACCGAATGCGATCGCATGAGCTCCAGCGCACTCAGCGACATGGTAGGTGGAGATA----AAATA----AGT---GCGGGTAGGGTGGGCC-TCAAT----------------------------TAC---------T------GCA-----------CCT--------AGAAGCA--CTGCAGCTGCCATCCAGC---TCCTGC--TCCTGC---------T-----CC---TGCTACAGCTGCAACTACTAATATGAATGCCTAGCTATC-TTACAC---------TC----------ATA-----CG--CACA--GAGAA--AAA-T-C-CAAAAGTTAAATTTTAAAGCA--AACTGGAACTGTGTTTA-------------------------------------------------------------------------------------------------TCCACAAT---------------------------------------------------------------------------------------------TT-----------------TTTGCTTTATGAGAGGAATATTTTTCTGAGCGTA-----------------GACACATACACGCATACACACAT--------------------------TAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........CGAATGCGATCGCATGAGCTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..............................................................................................................................................................................................................................................................................CTAGCTATC-TTACAC---------TC----------ATA-----CG--CACA--GA......................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................CGCATGAGCTCCAGCGCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................CTCCAGCGCACTCAGCGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
TCACAGACACCGAATGCGACCGCATGAGCTCCAGTGCGCTCAGCGACATGGTATGTGGCCC----AGT--TCAGG----------------------------------------------------------------------------------------------------------------------------------------------CCAAG------CAGACTTAC---AACTGCTCCTG---CTACTAATCTGAATGCTCAGCAAAC-AAATACACACGCTACAATCACACACATCCA-----------CA--CACAC--TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ACAC--------------------------ATACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..ACAGACACCGAATGCGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110

Generated: 05/17/2015 at 10:15 PM