ID:

dse_537

 Coordinate:

scaffold_0:15349716-15349866 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.0 -2.7 -2.6

Flybase annnotation

exon [dsec_GLEANR_6918:11]; CDS [Dsec\GM23894-cds]; intron [Dsec\GM23894-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAGCATGAAGACGTTTTTTAGTTTTTGTTTCCTTCATTTTTTCATTTATTACGCTTTTAGTTGCTTTTGAAATTTTCACATTTTTATTAATTTCTATTTCTTTTGAACATTTTTGATTTATTTTACTTTACCTACGAATAGATTTACTTCGTATTATTATTTCCATGATTTCCTACAAATTTTACACTTCTTTGATTTAGAACAAAAATAGACAAATTTTTTTGATTGACGAAGCGCGTGTTTTGGAAAT
*****************************************************************************************............................................((((((.........))))))................********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V115
head
 V114
embryo
 V113
male body
...........................................................................................................................................................................................................................TTTTTGATTGACGAAGCGCGT........... 21 0 1 5.00 5 2 2 1 0
............................................................................................................................................................................................................................TTTTGATTGACGAAGCGCGTG.......... 21 0 1 4.00 4 0 2 2 0
.....................................................................................................................................................TCGTATTATTATTTCCATGAT................................................................................. 21 0 1 3.00 3 1 1 1 0
..................................................................................................................................................................................................................................TTGACGAAGCGCGTGTTTTGG.... 21 0 1 3.00 3 1 0 2 0
.........................................................................................................................................................................................................................TTTTTTTGATTGACGAAGCGC............. 21 0 1 3.00 3 0 1 1 1
.........................................................................................AATTTCTATTTCTTTTGAACA............................................................................................................................................. 21 0 1 2.00 2 2 0 0 0
..............................................................................................................................................................................................................................TTGATTGACGAAGCGCGTGTT........ 21 0 1 2.00 2 1 1 0 0
........................................................................................................................................................................................................................ATTTTTTTGATTGACGAAGCG.............. 21 0 1 2.00 2 0 1 0 1
............................................................................................................................TACTTTACCTACGAATAGATT.......................................................................................................... 21 0 1 2.00 2 2 0 0 0
.............................................................................................................................................................................................................................TTTGATTGACGAAGCGCGTGT......... 21 0 1 2.00 2 1 0 0 1
................................................................................................................................................................TTTCCATGATTTCCTACAAAT...................................................................... 21 0 1 1.00 1 1 0 0 0
....CATGAAGACGTTTTTTAGTTT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...............TTTTTAGTTTTTGTTTCCTTC....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0
...........................................................................................................................................TAGATTTACTTCGTATTATTA........................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................TTTTACACTTCTTTGATTTAG.................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................ATTATTATTTCCATGTTTTCC............................................................................. 21 1 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................GATTGACGAAGCGCGTGTTTTG..... 22 0 1 1.00 1 0 0 0 1
...............................................................................................................................................................................................................................TGATTGACGAAGCGCGTGTTT....... 21 0 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................................GACGAAGCGCGTGTTTTGGA... 20 0 1 1.00 1 0 0 1 0
.........................................................................................................................................................................................................................TTTTTTTGATTGACGAAGCGCGT........... 23 0 1 1.00 1 1 0 0 0
......................................................................................................................TTATTTTACTTTACCTACGA................................................................................................................. 20 0 1 1.00 1 1 0 0 0
...................................CATTTTTTCATTTATTACGCT................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
............................................................................................................................................................ATTATTTCCATGATTTCCTACA......................................................................... 22 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................CAAATTTTTTTGATTGACGT.................. 20 1 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................................TTCTTTGATTGACGAAGCG.............. 19 1 1 1.00 1 0 0 1 0
..........................................................................................................................................................................................................................TTTTTTGATTGACGAAGCGCG............ 21 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................TATTTCCATGATTTCCTACAA........................................................................ 21 0 1 1.00 1 1 0 0 0
..................................................................................................................................................ACTTCGTATTATTATTTCCA..................................................................................... 20 0 1 1.00 1 1 0 0 0
................................................................................................................................TTACCTACGAATAGATTTACT...................................................................................................... 21 0 1 1.00 1 1 0 0 0
...........................................................................................................................TTACTTTACCTACGAATAGAT........................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................TGACGAAGCGCGTGTTTTGGA... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................CATGATTTCCTACAAATTTT................................................................... 20 0 1 1.00 1 1 0 0 0
............................................................................................TTCTATTTCTTTTGAACATTT.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................ACAAATTTTTTTGATTGACGA.................. 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................TTTCCATGATTTCCTACAAA....................................................................... 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................AATTTTTTTGATTGACGAAGCGCGT........... 25 0 1 1.00 1 0 1 0 0
................................................................................................ATTTCTTTTGAACATTTTTG....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.............................................TTTATTACGCTTTTAGTTGCT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................TTGACGAAGCGCGTGTTTTGGA... 22 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................TTGATTGACGAAGCGCGTGTTT....... 22 0 1 1.00 1 0 0 0 1
..................................TCATTTTTTCATTTATTACG..................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................CCATGATTTCCTACAAATTTT................................................................... 21 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................TTATTATTTCCATGATTTCCT............................................................................ 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................................AATAGATTTACTTCGTATTAT............................................................................................. 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................ATAGACAAATTTTTTTGATTGA..................... 22 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................AATTTTTTTGATTGACGAAG................ 20 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................TACACTTCTTTGATTTAGAA................................................ 20 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................................TGACGAAGCGCGTGTTTTGG.... 20 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................................................................TTTTTTTGATTGACGAAGCGCG............ 22 0 1 1.00 1 0 1 0 0
...........................................................................................TTTCTATTTCTTTTGAACATT........................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................AGGTTTTGTTTCCTTCATTTTT................................................................................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0

Anti-sense strand reads

ATTCGTACTTCTGCAAAAAATCAAAAACAAAGGAAGTAAAAAAGTAAATAATGCGAAAATCAACGAAAACTTTAAAAGTGTAAAAATAATTAAAGATAAAGAAAACTTGTAAAAACTAAATAAAATGAAATGGATGCTTATCTAAATGAAGCATAATAATAAAGGTACTAAAGGATGTTTAAAATGTGAAGAAACTAAATCTTGTTTTTATCTGTTTAAAAAAACTAACTGCTTCGCGCACAAAACCTTTA
*********************************************************************************............................................((((((.........))))))................***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V113
male body		 V115
head
......................................................................................................................................................................................................................................GCTTCGCGCACAAAACCTTTA 21 0 1 2.00 2 2 0 0 0
.................................................................................................................................ATGGATGCTTATCTAAATGAA..................................................................................................... 21 0 1 2.00 2 1 1 0 0
...................................................................................................................................................................................TAAAATGTGAAGAAACTAAA.................................................... 20 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................ACTGCTTCGAGCACAAAACC.... 20 1 1 1.00 1 0 0 1 0
...........................................................................................................................................................................AGGATGTTTAAAATGTGAA............................................................. 19 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................AAAGGATGTTTAAAATGTGAA............................................................. 21 0 1 1.00 1 0 0 0 1
...................................................................................................................................................................................................................CTGTTTAAAAAAACTAACTGC................... 21 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................AGGATGTTTAAAATGTGA.............................................................. 18 0 1 1.00 1 0 1 0 0
.........................................................................................TTAAAGATAAAGAAAACTTGT............................................................................................................................................. 21 0 1 1.00 1 0 0 0 1
....................................................................................................................................................................................AAAATGTGAAGAAACTAAAT................................................... 20 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................................TGCTTCGCGCACAAAACCTTT. 21 0 1 1.00 1 0 0 1 0
.....................................................................................................................................................................................................................GTTTAAAAAAACTAACTGCTT................. 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................TAAAATGTGAAGAAACTAAAT................................................... 21 0 1 1.00 1 0 0 1 0
..........................................................................................TAAAGATAAAGAAAACTTGTA............................................................................................................................................ 21 0 1 1.00 1 0 0 0 1
.............................................................................................................................................................TATAAAGGTACTAAAGGATGT......................................................................... 21 1 1 1.00 1 1 0 0 0
....................................................................................................................................................................GTACTAAAGGATGTTTAAAAT.................................................................. 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................CTAACTGCTTCGCGCACAAAACCTT.. 25 0 1 1.00 1 1 0 0 0
.................................................................................................................................................ATGAAGCATAATAATAAAGGT..................................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................................ACGAAAACTTTAAAAGTGTAAAA...................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1
...........................................GTAAATAATGCGAAAATCAAC........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................................CTAAAGGATGTTTAAAAT.................................................................. 18 0 1 1.00 1 0 1 0 0
..............................................................................................................................................................................................................................AACTAACTGCTTTGCGCACAA........ 21 1 1 1.00 1 0 1 0 0
................................................TAATGCGAAAATCAACGAAAA...................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................ACTTTAAAAGTGTAAAAATAA.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................ACTGCTTCGCGCACAAAACCT... 21 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................................TGCTTCGCGCACAAAACCTTC. 21 1 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................................CTAACTGCTTCGCGCACAAAA...... 21 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................AGGTACTAAAGGATGTTTAAAA................................................................... 22 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................................................................ACTAACTGCTTCGCGCACAAA....... 21 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................................GTGAAGAAACTAAATCTTGTT............................................. 21 0 1 1.00 1 0 1 0 0
..............................................................................................................................................................ATAAAGGTACTAAAGGATGT......................................................................... 20 0 1 1.00 1 0 1 0 0
..............................................................................................................................................................ATAAAGGTACTAAAGGATGTTT....................................................................... 22 0 1 1.00 1 0 0 0 1
............................................................................................................................................TCTAAATGAAGCATAATAAT........................................................................................... 20 0 1 1.00 1 0 0 1 0
........................................................................................................................................................................................................CTTGTTTTTATCTGTTTAAAA.............................. 21 0 1 1.00 1 1 0 0 0
.................................................AATGCGAAAATCAAGGAGA....................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0
..........................................CGTAAAAAATGCGAAAATC.............................................................................................................................................................................................. 19 2 6 0.17 1 1 0 0 0
...........................................................................................................................................................................TAGATGTTTAAAATGTGTAGA........................................................... 21 3 10 0.10 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_0:15349666-15349916 - dse_537 TAAGCATG--A--A---------GACGTTTT-----TTAGTTT------------------------------------T---TGTTT---CCTT-------------------CATTTTTTCA-TTTATTAC---GC--------------T--------------------------------TTTAGT---TGCTTTTGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTATTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGATTTCCTACA---------------AATTTTACA-------------CTTC------------TT--------------------------------TG-----ATTT-A----------GAAC-AAAAATAGACA---AAT--TT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAAT
droSim2 3r:14482325-14482566 - TAAGCATG--A--A---------GACGTTTT-----TTAGTTT------------------------------------T---TGTTT---CCTT-------------------CATTTTTTCA-CTTATTAC---GC--------------T--------------------------------TTTAGT---TGCTTTTGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTACA---------------AATTTTA-----------------------------------------------------------------------------A----------GAAC-AAAAATAGACA---AATCATT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAAT
dm3 chr3R:6591976-6592242 + TAAGCATG--A--A---------GCCGTTTT-----TTAGTTT------------------------------------T---TCTTTCA--CTT-------------------CACTTTTTTAACTTTTTACGACGC--------------T--------------------------------TTTAGT---TGCTTATGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTATTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTAAA---------------AATTTAACACTAT------AC-CTCC------------TT--------------------------------TG-----ATTT-A----------GAAC-AAAAATAGACA---AATGACT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAAT
droEre2 scaffold_4770:15011175-15011449 - TAAGCATG--A--A---------GCCGCTTT-----TTAGTTT------------------------------------T---AC-------T-------TTTA----------CATTTTTTCGGTTTGTTAC---TC--------------TTTTT-----------AT-TTTCT---------TTTATT---TGATTTTGAAATTTTCACAATTTTATTTACTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATTTGTTTAGTATCCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATGGTTTCCTAAA---------------AATTTAACTCTAT------AC-CTCC------------TT--------------------------------TA-----ATTT-A----------GAACAAAAAATAGACA---ATTGGCT-T---T-TTGATT------GAC-GA-CGCATGTGATTTTGGAAAT
droYak3 3R:10633184-10633454 + TAAGCATG--A--A---------GCCGCTTT-----TTATGTT------------------------------------T-----------TC-------TTA-----------AATTTTTTCGGTTTATTAC---AC--------------TTTTT-----------TG-TTTCT---------TTTATT---TGCTTTTGAAATTTTCCCTT-TTTTTTTATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACTTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATTTATTTTGTATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATAATTTCCTAAA---------------AATTGAACTGTAT------AC-CTCT------------TT--------------------------------TA-----ATTT-A----------GAACAAAAAATAGACA---AATGGCT-T---T-TTGGTT------GCC-GA-AGTGCGTG-TTTTGGAAAT
droEug1 scf7180000409797:204840-205116 + GAAACATG--A--ATGAGTTAATG-CGCTTT-----TTAGTTC------------------------------------T---T-------TT---------------------TATTTGTTCGAATTGCAAC---TT--------------TTTTT-----------AG-TTCCT---------TTGTTT---CGCATTTGAAATTTTTATAT-TTTCTTCAGTTCTATTTATGTTTT---------------GAACATTTTTGATTTCATTTACTTTACGCACGACTTTATTT-----------------------------------------------------------TTATATTCT---------------------------------------------------------------------------------------------------------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTTATAATTTCTAAAA---------------TCTTTAAATTTAA------GC-CACC------------CT-----------------------------T--GATTGGCATTT-C----------GAAA-AAAAATACA-------CGGCT-T---T--GTATT------GAC-GC-AGGAAATG-TTGTGGAAAT
droBia1 scf7180000302402:8727075-8727317 + CAAGCACA--A--ATGAGTTGATGCCGCTTT-----TTAGTTT------------------------------------C---T-------TT-------TAT-----------CATTTTTTCGGTTTAATAC---TT--------------T-------------------------------------T---TTCTTTTGAAATCCAAACATTTTTATTCATTTATATTT--CTTTT---------------TAT----------TTCAATTTCTTTATCTTTGA--------------------------------------------------------------------------------------------------------------TTTTTTTAAT----------------------------T---------------------------------------ATAGTTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTAATGAATTCTTACA---------------AATTTAATTTTCA------TC-CACCG-----------TT--------------------------------TGATTGCATTT-T----------------------GAAA---AATGGCC-T---T-T----T------GAC-GC-AGTAAGTG-TTTTGGAAAT
droTak1 scf7180000415653:407518-407775 - CAAACATG--A--ATAAGTTGATGCCACCTT-----TTAGTTA------------------------------------A---AC-------T-------TCC-----------AAATTTTTCAGTTCATTACTGCGC--------------C--------T-A-----TT-T-TT---------TACTTT---TGCTTTTGAAATTCTTATATTTTTATTCATTTATGTTC--CCTTT---------------GAATTTT-----------TTTCTTCACCTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCAAGTATATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTATGATTTATTTCA---------------ATTTTAGTTTAAA------AC-CACA------------TT--------------------------------TAATTACATTT-T----------------------GAAA---AATAGCC-T---T-TTGATT------GAC-GC-AGTAAGTG-TTTTGGAAAT
droEle1 scf7180000486474:853223-853497 + CAAGCATG--TGAATGAGTTGATGCCACCTT-----TTAGTTT------------------------------------T---TT------TC-------TTT-----------AATTTTTTCGCCTTACTATTTCAT--------------T--------------------------------TTCTTA---TACTTTTGAAACTT----------ATCATTTCCTTTTT--CTTTT---------------GAAT----------------------------------------------------------------------------------------------------------------------------------TT-----AA--------------------------GGTTCTCAAT--GAT-------------TATTACAAATTTTTACATT---------------------------------------------------------------------------------------------------------ACTTTATTTCAT---------------------------------TTT----------------------------TTACCATAATTTCTTTT--------ACTTT-CACATTTTATTATTA------GC-CATTT-----------TT-----------------------------G--GACTTGCATTT-T----------GA---AAAAATAGACA---AATCATCGT---T-TAAATT------GACCAC-AGTCAGTG-TTTTGGAAAT
droRho1 scf7180000780140:142565-142836 + TAAACATA--TGAATAAGTTAATACCACCTT-----TTGGTTT------------------------------------T---T-------TA-------TTT-----------ACTTTTTTGGATTTATTATTTCAT--------------T--------------------------------TTCATT---TGCTTTTGAATTTT----------ATCCTTTCATTTTT--ATTTT---------------T---------------------------------------------------------------------------------------------------------------------------------------------A--------------------------GATTCTCAATTTACT-------------TA-TACAAATTTTTGCTTT---------------------------------------------------------------------------------------------------------CTTTACTTTGAT---------------------------------TTT-----------TTCTTGAATTTTCTTTTCCTTTACAATTTCATACA---------------CATTTTATTTTCA------GA-CATAT-----------TT--------------------------------TAATTGCATTT-A----------AAAA-GAAAATAGACA---A-------T---T-TCAATT------AACAAC-AGGAAGTG-TTTTGG--AT
droFic1 scf7180000454104:247454-247626 + ACAGCATT--TAAATGAGTTGATGCAAATAT-----TTCATTT------------------------------------C---TTTTTGA--GTTTACCTTTT-----------TATTTTTTGAGTTCAT----------------------T--------------------------------TTTATT---TTCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTTATTTTG---------------------------------ATT-----TTG----------------------C-TA---------------------------------------------T--AACTTGTTGGT-------------AAA-AAAAATAGACA---AATGGCT-A---TAATGATT------GACCGA-AGGATGTG-TTTTGGAAAT
droKik1 scf7180000302388:552474-552794 - TAAACATT-GTGAAAGAGATCAACATGCATT-----TTGGTTT------------------------------------T---CC-------C-------TTTA----------ATTTTCTTCAAAATTTTAT---AT--------------T--------------------------------TTCAGTTTTGGCATTTGAAATTTT---ATTTTCTTTTATATACATTT--TCTTT---------------AAATTTCTC-----------TTT---TCTCTAATTTTT-CTTATTCTTTATCAAATTTATTTTCT---------------------TTTTTATTTCATTT-----------------------------------------------------TTTCTTATAACATT-----------------------------------------------------AACA-------------------------------------------------------------------------------------CACTTTGGTTGT--TTCCTTTAATTTTATATAACATTTTATTTTCCTTTCTTTACATTCTT---A--------------------------------------------------------AACTGTATTGTAA------AT-GTAA------------TT--------------------------------TA-----ATT----------------------------------TTGCA-T---C-TTGAAC------AATCAC-CAATTACG-TTTTGGAAAT
droAna3 scaffold_13340:1238304-1238549 + TAGAAACA--CCGAGTGGTTCAATCTGCAGT-----TCAATTT---------------------------TTTCCTTAT-TTTC------------------------------------ATTAAC------------TTTTTAAGTCA-TT-TTTTCAAAT-T-----TACTT---------------------------------TTTTCA--------------------------TTTCACTTTAATT----------------------------------------------------------------------------------------------------------------------------------------TT-----AATTTTTTAAAT----------------------------TACATTTTCAA---------------------------------------------------T------------------------------------------------------------------------------------------------------------ACTTTTTTTTACACTTCTGAAGATTAACTTTTTTT-----------------------------------GTTTT-TA-----C-------TTTTTTGATTTC-ATTT--------TT-----------------------------A--ATTTCGCAGTTTG----------AAACTGAAAGCAAACA---A----C------T-TTGGTT------TGT------ATAGTG-TTTTGG-AAT
droBip1 scf7180000396712:587683-587938 - TGGAAACACCTCACATGGTTCATCCTGCATTACTATTTGGTTT------------------------------CCTTAT-TTTC------------------------------------ATTA-----TATT---C-TTTTTTAGTTAATA-TTTTCATAT-T-----TC-T-TT---------CGATTT---CGATTTTGAGTTTT------------------------------------CTTTATTT----------------------------------------------------------------------------------------------------------------------------------------TT-----AATTTTCTTA-T----------------------------T-------------------------------------------------A------------------------------------------------------------------------------------------------------------------------ACTTTTCTTTACATTTTTGAAGCTTTATTTTT---------------------------------GTTTTATTTT-TA-----C-------TTTTTTGA-TTC-A--------TTTTTGTT--------------------------T--ATTTCGCAGTTTG----------AAACTGAAAGCAAACA---T-------C---A-TTGGTT------T------GTATAGTG-TTTTGG-AAT
dp5 2:29356295-29356692 - TAAGCATT--G-AACAAATTTC----------------AGATCGCCCTTCAAATGTGTGTCGAATAATTCTTGCCTCTT-TTTC------GGT-----------TATGATTTAT------------------------TGTTTAAGACA-TT-TTTT-----------TG-TTT------------------------------------------TTTTTTA----------------ATTTTCTTTAATTTTGATTTCT-----------A---------------------TTATTTGCCATTAATTTCATTTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTGTATTATTATTTTTTGAATTTTTATACCCTGCAAGGCCTACGAGACTATAGCCTCGATCTGTGGAACGATCGGCCTGTATGAGTTATTTTTCATTTAAT-----------------------------------------------TTCTTGCA-----------------------------------TTTT-TA-----T-------TTTCCTTATTTC-ATTTCATTATCATTATCAAACATCACTGAAT-------GTTTTGGTTGTTCGCATTT-C----------AGAC-AAAATCAGAGA---AGAAATT-T--TA-TTTAATGGCTAAG-TTGC-TGGAAGTG-TTTCGGGAAT
droPer2 scaffold_6:4724793-4725189 - TAAGCATT--G-AACAAATTTC----------------AGATCGCCCTTCAAATGTGTGTCGAATAATTCTTGCCTCTT-TTTC------GGT-----------TATGATTTAT------------------------TGTTTAAGACA-TT-TTTT-----------TG-TTT------------------------------------------GTTTTA-----------------ATTTTCTTTAATTTTGATTTCT-----------A---------------------TTATTTGCCATTAATTTCATTTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTGTATTATTATTTTTTTAGTTTTTATACCCTGCAAGGCCTACGAGACTATAGCCTCGATCTGTGGAACGATCGGCCTGTATGAGTTATTTTTCATTTAAT-----------------------------------------------TTCTTGCA-----------------------------------TTTT-TA-----T-------TTCCCTTATTTC-ATTTCATTATCATTATCAAACATCAGTGAAT-------GTTTTGGTTGTTCGCATTT-C----------AGAC-AAAATCAGAGA---AGAAATT-T--TA-TTTAATGGCTAAG-TTGC-TGGAAGTG-TTTCGGGAAT
droWil2 scf2_1100000004943:4658317-4658576 - TCATTTTG--A--A---------ATTA------------ATTT---------------------------TTTTTTTAT-TTTT------GTT-----------TACGATTCTC------------------------CATTCTATATT-TT-TCTT-----------TA---------------------------TCTTGAAGCAT-----------------------------------------------------------------------------AATTTTTTTT-----------------------------------------------------------TCATATTCTTTTGATTCTCGATCTAAATTTTCATTAATTTTTATTTTTTTGAT----------------------------T--ATTTTTAATAGTTTTT------TTTCTTTAGTT-TCA---G------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------TTATT-----TTC----------------------C---T-------------A------------------------------T--TTTTTGCATGTAA----------AAAATCAAAACACAGAGTTTGCCATT-TTTCA-TTTTACAAACAAG-T----CAAAAATATCTTTGGAAGT
droVir3 scaffold_13047:7577986-7578271 + TACGTTTG--A--ACAAGTTTTTTCAA-ATT-----TCAT----------------------------------------TTTT------TCT-----------TATCATTTTC------------------------CATTCTTTATA-TT-TTTT-----------TT-TTG-TTTTTTCATTT-TTTA---TAT-TTTGTAAAAT----------TTCATTTTCACTTT--CTTTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCGTTTTCTATT----------------------------T--TTGTTTTATAGTTTTTCAAAAATTTCTTCATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-ATTTATTCATTTTTCTCA-----------ACTTAAAATCTTTCA--GAAACGCAAGT-C----------TA---AAAAATAAT-----AATGAAA-T---C-AAGATT------ACCCAGAGACACATA-TTGTGGAAAT
droMoj3 scaffold_6540:3535806-3536101 + TATATTTG--A--ACT---------T----T-----ACCGTT--------------------------------------TT-C-------TG-------TT--TCTAATTTTA---------------------------------------------GTTTTCATCAG-TT----TT------TTTTTT---TACATTT-----------------------------------------------------AATTTT----------------------------------TCATTCACAATTAATTTTCTTACACTCAATTTATTTTGGTTTATATTTTTCATTTTATTT-----------------------------------------------------TTTCTTTTCACGTTCAATTTAT--------------------------------------------------------CCCACATTA-----------------------------------------------------------------------------------TTCATTTA-------------------------------------T-----------TTCTT--------------------------------------------------AGT-------TTTTCATTTC-ATTTAATCATTATCATTTATTTTCCCTTAAT----TATCTTTCA-------GCAGGCAAAAGTTTCAATGA---AAAAATGT-------ATAAAA-T---T-TAAATC------AACTAGAGGGACATA-TTTTGGAAAT
droGri2 scaffold_14830:3430910-3431192 + TATGCTTG--A--AAAACTTTT----------------AGAAAGATTTT----------------------------TT-TTTT------GCT-----------TATCATTTCG---------------------------------------------CTTTACTTTAT-TA----TT------TTGCTA---TAAATTT-------------------TA-----------------CTTTTTTTTATTATTAATTTTA-----------A-TTA---TTTCGAAGTTTT-CTTAT-------GCTTTTCATATCA---------------------------------TTT----------------------------------------TTAGAT-TATACTTTTCTTTTGGACTTTCGTTAAT---------------------------------TTTTCATTCATGAATTCATTATTTTCTT------------------------------------------------------------------------------------------------------------------------TTCATTACGTTA---ATAATTAATTTTCATT-----------------------------------ATGTT-TA-----C-----------------------TAAT----TTTCTTA-----------ATTAAAACTCTTTCA-------------------------------GAA----------------------------------------GC--ACACGAA-ATTTGGAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TAAGCATG--A--A---------GACGTTTT-----TTAGTTT------------------------------------T---TGTTT---CCTT-------------------CATTTTTTCA-TTTATTAC---GC--------------T--------------------------------TTTAGT---TGCTTTTGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTATTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGATTTCCTACA---------------AATTTTACA-------------CTTC------------TT--------------------------------TG-----ATTT-A----------GAAC-AAAAATAGACA---AAT--TT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-AGCGCGT............2115.0052012
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-AGCGCGTG-..........2114.0040022
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTATTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGAT.............................................................................................................................................................................................2113.0031011
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-AGCGCGTG-TTTTGG....2113.0031020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TT-T---T-TTGATT------GAC-GA-AGCGC..............2113.0030111
.............................................................................................................................................................................................................................AATTTCTATTT--CTTTT---------------GAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATT------GAC-GA-AGCGCGTG-TT........2112.0021001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TT-T---T-TTGATT------GAC-GA-AGCG...............2112.0020101
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATT................................................................................................................................................................................................................................................................................................................................................................................2112.0022000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGATT------GAC-GA-AGCGCGTG-T.........2112.0021100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGATTTCCTACA---------------AAT...................................................................................................................................................................2111.0011000
....CATG--A--A---------GACGTTTT-----TTAGTTT------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
............................TTT-----TTAGTTT------------------------------------T---TGTTT---CCTT-------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTACTTCGTATTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACA-------------CTTC------------TT--------------------------------TG-----ATTT-A----------G......................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATT------GAC-GA-AGCGCGTG-TTTTG.....2211.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-AGCGCGTG-TTT.......2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-GA-AGCGCGTG-TTTTGGA...2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TT-T---T-TTGATT------GAC-GA-AGCGCGT............2311.0011000
...........................................................................................................................................................................................................................................................................TTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................................................................................CATTTTTTCA-TTTATTAC---GC--------------T--------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGATTTCCTACA---------------......................................................................................................................................................................2211.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---AAT--TT-T---T-TTGATT------GAC-GT-...................2011.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCG.............2111.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGATTTCCTACA---------------A.....................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGTATTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCA.................................................................................................................................................................................................2011.0011000
.....................................................................................................................................................................................................................................................................................TTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACT............................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................TTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGAT.................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAC-GA-AGCGCGTG-TTTTGGA...2111.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGATTTCCTACA---------------AATTTT................................................................................................................................................................2011.0011000
................................................................................................................................................................................................................................TTCTATTT--CTTTT---------------GAACATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---AAT--TT-T---T-TTGATT------GAC-GA-...................2111.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGATTTCCTACA---------------AA....................................................................................................................................................................2011.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TT-T---T-TTGATT------GAC-GA-AGCGCGT............2511.0010001
....................................................................................................................................................................................................................................ATTT--CTTTT---------------GAACATTTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.............................................................................................................................TTTATTAC---GC--------------T--------------------------------TTTAGT---TGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-AGCGCGTG-TTTTGGA...2211.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATT------GAC-GA-AGCGCGTG-TTT.......2211.0010100
..............................................................................................T-------------------CATTTTTTCA-TTTATTAC---G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGATTTCCTACA---------------AATTTT................................................................................................................................................................2111.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTA----------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCATGATTTCCT........................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGATTTACTTCGTATTAT...................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACA---AAT--TT-T---T-TTGATT------GA........................2211.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TT-T---T-TTGATT------GAC-GA-AG.................2011.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACA-------------CTTC------------TT--------------------------------TG-----ATTT-A----------GAA....................................................................2011.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAC-GA-AGCGCGTG-TTTTGG....2011.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TT-T---T-TTGATT------GAC-GA-AGCGCG.............2211.0010001
...............................................................................................................................................................................................................................TTTCTATTT--CTTTT---------------GAACATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droSim2
TAAGCATG--A--A---------GACGTTTT-----TTAGTTT------------------------------------T---TGTTT---CCTT-------------------CATTTTTTCA-CTTATTAC---GC--------------T--------------------------------TTTAGT---TGCTTTTGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTACA---------------AATTTTA-----------------------------------------------------------------------------A----------GAAC-AAAAATAGACA---AATCATT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-AGCGCGT............21130.0030000000914241000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-T---T-TTGATT------GAC-GA-AGCGC..............21112.001230100001007000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATT------GAC-GA-AGCGCGTG-TT........21112.001200000011333001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGATT------GAC-GA-AGCGCGTG-T.........2115.00500000031000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATT------GAC-GA-AGCGCGTG-TTTT......2115.00500010000004000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-AGCGCGTG-TTTTGG....2114.00400000000103000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-----------------------------------------------------------------------------A----------GAAC-AAAAATAGACA---AATCATT-............................................2514.00400000000310000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-AGCGCGTG-TTT.......2414.00400000002011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-AGCGCGTG-..........2114.00400000002001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-T---T-TTGATT------GAC-GA-AGCG...............2113.00300000001011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGATT------GAC-GA-AGCGCGTG-TT........2213.00300000001110000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT------GAC-GA-AGCGCGTG-TTTTG.....2113.00300000001002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCG.............2113.00300000000120000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTA.................................................................................................................................................................................................2112.00200010000010000000
...............................................................................................................................................................................................................................................................AACATTTTTGATTTATTTTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000020000000
.......................................................................................................................................................................................................................................................................TGATTTATTTTACTTTACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTA-----------------------------------------------------------------------------A----------GAAC-AAAAATAGACA---AATCA...............................................2612.00200000000110000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-AGCGCGTG-TTT.......2112.00200010000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAC-GA-AGCGCGTG-TTTTGG....2012.00200000000002000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-GA-AGCGCGTG-TTTTGGAAA.2112.00200000000002000000
..........................................................................................................................................................................................................................................CTTTT---------------GAACATTTTTGATTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACA---AATCATT-T---T-TTGA..................................2012.00200000002000000000
.....................................................................................................................................................................................................TTTTGAAATTTTCACATTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATTTCCTACA---------------AATTTTA-----------------------------------------------------------------------------..................................................................................2112.00200000000000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGACA---AATCATT-T---T-TTGA..................................2112.00200000002000000000
............................................................................................................................................................................................................................................................................TATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA......................................................................................................................................................................................................................................................................................................................................................................................2012.00200000010010000000
...................................................................................................................................................................................................................................TATTT--CTTTT---------------GAACATTTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................TTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTA.......................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATT................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAC-GA-AGCGCGTG-TTTTGGAA..2211.00100000000001000000
.........................CGTTTT-----TTAGTTT------------------------------------T---TGTTT---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGATT------GAC-GA-AGCGCGTG-..........2011.00100000000000001000
......TG--A--A---------GACGTTTT-----TTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTA-----------------------------------------------------------------------------A----------GAAC-AAAAATAGA.........................................................2111.00100000100000000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGAT.................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTA.......................................................................................................................................................................................2111.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATT.....................................................................................................................................................................................................2111.00100000010000000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTTCGTA.......................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACA---AATCATT-T---T-TTGATT------GAC-GA-...................2611.00100000000010000000
......................................................................................................................................................................................................................TTTTATTAATTTCTATTT--CTTTT---------------GAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.......................................................................................................................................................................................................................................T--CTTTT---------------GAACATTTTTGATTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
..............................................................................................................................................................................................................................................T---------------GAACATTTTTGATTTATTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACTT...........................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-AGCGCGTG-TTTTGGAA..2311.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-GA-AGCGCGTG-TTTTGG....1911.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-T---T-TTGATT------GAC-GA-AGCGCG.............2311.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTACA---------------AATTT.................................................................................................................................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................TTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA..................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCGT............2211.00100000010000000000
............................................................................................................................................................................................AGT---TGCTTTTGAAATTTTCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTATGATTTCCTACA---------------AA....................................................................................................................................................................2111.00100000010000000000
............................................................................................................................................................................................................................................TTT---------------GAACATTTTTGATTTATTTTACTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.......................................................................................................................................................................................................................................................................TGATTTATTTTACTTTACCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTT......2711.00100000001000000000
................................................................................................................................................................................................................TCACATTTTTATTAATTTCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
....................................................................................................................................................................................................CTTTTGAAATTTTCACATTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-AGCGCGTG-T.........2211.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-T---T-TTGATT------GAC-GA-AGC................2011.00100000000001000000
.........................................................................................................................................................................................TTTAGT---TGCTTTTGAAATTTTCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-GA-AGCGCGTG-TTTTGGAA..2111.00100000001000000000
...........................................................................................................................................................................................TAGT---TGCTTTTGAAATTTTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA..................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGACA---AATCATT-T---T-TTGA..................................2211.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTC.......2611.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCT..................................................................................................................................................................................................2111.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-GA-AGCGCGTG-TTTTGG....1811.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TA.......................................................................................................................................................................................................2111.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TAT......................................................................................................................................................................................................2111.00100000000010000000
.................................................................................................................................................................................................................................................................................TACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTACT............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-GA-AGCGCGTG-TTTTGGAT..2011.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACA---AATCATT-T---T-TTGAT.................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCT..................................................................................................................................................................................................2011.00100001000000000000
.....................................................................................................................................................................................................................................TTT--CTTTT---------------GAACATTTTTGATTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T---T-TTGATT------GAC-GA-AGCGCGTG-TT........2511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATT-T---T-TTGATT------GAC-GA-...................2011.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTACTTCGTAT......................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-T---T-TTGATT------GAC-GA-A..................1811.00100001000000000000
................................................................................................................................ATTAC---GC--------------T--------------------------------TTTAGT---TGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.......................................................................................................................................................................................................................................T--CTTTT---------------GAACATTTTTGATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-AGCGCGTG-A.........2211.00101000000000000000
......................................................................................TT---CCTT-------------------CATTTTTTCA-CTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.........................................................................................................................................................................................TTTAGT---TGCTTTTGAAATTTTCACATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTATGATTTCCTACA---------------......................................................................................................................................................................1911.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-GA-AGCGCGTG-TTTTGGAAAT2211.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTT......2611.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-AGCGCGTG-TTTTGGA...2511.00100000000100000000
................................................................................................................................................................................................................................................................................TTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGAT.................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-AGCGC..............1520.50100000000001000000
..................................................................................................................................................................................................................................................................ATTTTTGATTTATTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16110.09100000000010000000
dm3
TAAGCATG--A--A---------GCCGTTTT-----TTAGTTT------------------------------------T---TCTTTCA--CTT-------------------CACTTTTTTAACTTTTTACGACGC--------------T--------------------------------TTTAGT---TGCTTATGAAATTTTCACATTTTTATTAATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTATTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCTATGATTTCCTAAA---------------AATTTAACACTAT------AC-CTCC------------TT--------------------------------TG-----ATTT-A----------GAAC-AAAAATAGACA---AATGACT-T---T-TTGATT------GAC-GA-AGCGCGTG-TTTTGGAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
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ML-DmD32		V023
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CME-W1-Cl.8+		V029
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G2		V128
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT-T---T-TTGATT------GAC-GA-AGCGG..............2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-A----------GAAC-AAAAATAGACA---AATGACT-T---........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTATTCTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------TATTTCA..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAA---------------AATTTAACACTAT------AC-CTCC------------TT--------------------------------TG-----A......................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----ATTT-A----------GAAC-AAAAATAGACA---....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------AC-CTCC------------TT--------------------------------TG-----ATTT-A----------GAAC-AT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATTTATT............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TTTGATTTATTTTACTTTACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-A----------GAAC-AAAAATAGACA---A...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------AC-CTCC------------TT--------------------------------TG-----ATTT-A----------GAAC-..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-AAAAATAGACA---AATGACT-T---T-TTGAT.................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC------------TT--------------------------------TG-----ATTT-A----------GAAC-AAAAAT............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................TTT-----TTAGTTT------------------------------------T---TCTTTCA--CTT-------------------CACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-A----------GAAC-AAAAATAGACA---AATGACT-............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GACGC--------------T--------------------------------TTTAGT---TGCTTATGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TTACGACGC--------------T--------------------------------TTTAGT---TGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TTTTCACATTTTTATTAATTTCTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------GAAC-AAAAATAGACA---AATGAC..............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTAAA---------------AATTTAACACTAT------AC-CTCC------------................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TT-------------------CACTTTTTTAACTTTTTACGACGC--------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAG...................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTATTTTACTTTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT-T---T-TTGATT------GAC-GA-AGC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................TTTTTAACTTTTTACGACGC--------------T--------------------------------TTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-AGCGT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACT-T---T-TTGATT------GAC-GA-AGCGCGTT-..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................TTACGACGC--------------T--------------------------------TTTAGT---TGCTTATGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAAGCATG--A--A---------GCCGCTTT-----TTAGTTT------------------------------------T---AC-------T-------TTTA----------CATTTTTTCGGTTTGTTAC---TC--------------TTTTT-----------AT-TTTCT---------TTTATT---TGATTTTGAAATTTTCACAATTTTATTTACTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATTTGTTTAGTATCCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATGGTTTCCTAAA---------------AATTTAACTCTAT------AC-CTCC------------TT--------------------------------TA-----ATTT-A----------GAACAAAAAATAGACA---ATTGGCT-T---T-TTGATT------GAC-GA-CGCATGTGATTTTGGAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-CGCATGT............2114.0040010030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GAC-GA-CGCATGTGATTTTGG....2114.0042000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-CGCATGTG...........2113.0031000020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-T---T-TTGATT------GAC-GA-CGCATG.............2113.0030000210
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-CGCATGTGATT........2113.0033000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAACTCTAT------AC-CTCC------------TT--------------------------------..............................................................................................2113.0033000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-CGCATGTGATTTTG.....2112.0021000010
...............................................................................................................................................................................................................TTCACAATTTTATTTACTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGATT------GAC-GA-CGCATGTG...........2012.0020000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCT-T---T-TTGATT------GAC-GA-CG.................2112.0020000020
...................................................................................................................................................................................................................................TATTT--CTTTT---------------GAACATTTTTGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.................................................................................................................................................................................................................................................................................TACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATT................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCTAAA---------------AATTTAACTCT...........................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACTCTAT------AC-CTCC------------TT--------------------------------TA-----.......................................................................................2111.0011000000
......................................................................................................TA----------CATTTTTTCGGTTTGTTAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCT-T---T-TTGATT------GAC-GA-CGC................2111.0010000010
............................................................................................................................................................T-----------AT-TTTCT---------TTTATT---TGATTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................................................................................................TTTGATTTATTTTACTCTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-T---T-TTGATT------GAC-GA-CGCAT..............2111.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTCTAT------AC-CTCC------------TT--------------------------------TA-----AT.....................................................................................2111.0011000000
..............................................................................................................................................................................................................................ACTTCTATTT--CTTTT---------------GAACAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GA-CGCATGTGATTTTGG....1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATA------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATGGTTTC..........................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGATT------GAC-GA-CGCATGTG...........2211.0011000000
............................................................................................................................................................................................................................................................................TATTTTACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA......................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GAC-GA-CGCATGTGATTTTGG....2211.0010000100
..........................................................................................................................................................................................................................................CTTTT---------------GAACATTTTTGATTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................T---AC-------T-------TTTA----------CATTTTTTCGGTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATT------GAC-GA-CGCATGTGAT.........2011.0010000100
...............................................................................................................................TGTTAC---TC--------------TTTTT-----------AT-TTTCT---------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGATT------GAC-GA-CGCATGT............2011.0011000000
...........................................................................................................................................................................................................................................................................TTATTTTACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACA---ATTGGCT-T---T-TTG...................................1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAA---------------AATTTAACTCTAT------AC-C...............................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................................................................................TCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATTTGTTTAGTA.......................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-GA-CGCATGTGATTTTGGA...2111.0010000100
..........................................................................................................................................................................................................................................................................TTTATTTTACTCTACCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.......................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
TAAGCATG--A--A---------GCCGCTTT-----TTATGTT------------------------------------T-----------TC-------TTA-----------AATTTTTTCGGTTTATTAC---AC--------------TTTTT-----------TG-TTTCT---------TTTATT---TGCTTTTGAAATTTTCCCTT-TTTTTTTATTTCTATTT--CTTTT---------------GAACATTTTTGATTTATTTTACTTTACTTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATTTATTTTGTATTCTTATA------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCTATAATTTCCTAAA---------------AATTGAACTGTAT------AC-CTCT------------TT--------------------------------TA-----ATTT-A----------GAACAAAAAATAGACA---AATGGCT-T---T-TTGGTT------GCC-GA-AGTGCGTG-TTTTGGAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGGTT------GCC-GA-AGTGCGTG-T.........2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T---T-TTGGTT------GCC-GA-AGTGCGTT-..........2211.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCTAAA---------------AATTGAACTGT...........................................................................................................................................................2111.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-TTGGTT------GCC-GA-AGTGCGTG-T.........2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTT------GCC-GA-AGTGCGTG-A.........2011.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAATAGACA---AATGGCT-T---........................................2111.00100001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------GCC-GA-AGTGCGTG-TTTTGG....2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-T---T-TTGGTT------GCC-GA-AGTGC..............2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GCC-GA-AGTGCGTG-TTTTGGAAAT2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---------------AATTGAACTGTAT------AC-CTC.............................................................................................................................................2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACA---AATGGCT-T---T-TTGGT.................................2111.00101000000000
droEug1
GAAACATG--A--ATGAGTTAATG-CGCTTT-----TTAGTTC------------------------------------T---T-------TT---------------------TATTTGTTCGAATTGCAAC---TT--------------TTTTT-----------AG-TTCCT---------TTGTTT---CGCATTTGAAATTTTTATAT-TTTCTTCAGTTCTATTTATGTTTT---------------GAACATTTTTGATTTCATTTACTTTACGCACGACTTTATTT-----------------------------------------------------------TTATATTCT---------------------------------------------------------------------------------------------------------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTTATAATTTCTAAAA---------------TCTTTAAATTTAA------GC-CACC------------CT-----------------------------T--GATTGGCATTT-C----------GAAA-AAAAATACA-------CGGCT-T---T--GTATT------GAC-GC-AGGAAATG-TTGTGGAAATSizeHit CountTotal NormTotal
No Reads
droBia1
CAAGCACA--A--ATGAGTTGATGCCGCTTT-----TTAGTTT------------------------------------C---T-------TT-------TAT-----------CATTTTTTCGGTTTAATAC---TT--------------T-------------------------------------T---TTCTTTTGAAATCCAAACATTTTTATTCATTTATATTT--CTTTT---------------TAT----------TTCAATTTCTTTATCTTTGA--------------------------------------------------------------------------------------------------------------TTTTTTTAAT----------------------------T---------------------------------------ATAGTTTTAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTAATGAATTCTTACA---------------AATTTAATTTTCA------TC-CACCG-----------TT--------------------------------TGATTGCATTT-T----------------------GAAA---AATGGCC-T---T-T----T------GAC-GC-AGTAAGTG-TTTTGGAAATSizeHit CountTotal NormTotal
No Reads
droTak1
CAAACATG--A--ATAAGTTGATGCCACCTT-----TTAGTTA------------------------------------A---AC-------T-------TCC-----------AAATTTTTCAGTTCATTACTGCGC--------------C--------T-A-----TT-T-TT---------TACTTT---TGCTTTTGAAATTCTTATATTTTTATTCATTTATGTTC--CCTTT---------------GAATTTT-----------TTTCTTCACCTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTCAAGTATATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTATGATTTATTTCA---------------ATTTTAGTTTAAA------AC-CACA------------TT--------------------------------TAATTACATTT-T----------------------GAAA---AATAGCC-T---T-TTGATT------GAC-GC-AGTAAGTG-TTTTGGAAATSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGCATG--TGAATGAGTTGATGCCACCTT-----TTAGTTT------------------------------------T---TT------TC-------TTT-----------AATTTTTTCGCCTTACTATTTCAT--------------T--------------------------------TTCTTA---TACTTTTGAAACTT----------ATCATTTCCTTTTT--CTTTT---------------GAAT----------------------------------------------------------------------------------------------------------------------------------TT-----AA--------------------------GGTTCTCAAT--GAT-------------TATTACAAATTTTTACATT---------------------------------------------------------------------------------------------------------ACTTTATTTCAT---------------------------------TTT----------------------------TTACCATAATTTCTTTT--------ACTTT-CACATTTTATTATTA------GC-CATTT-----------TT-----------------------------G--GACTTGCATTT-T----------GA---AAAAATAGACA---AATCATCGT---T-TAAATT------GACCAC-AGTCAGTG-TTTTGGAAATSizeHit CountTotal NormTotal
No Reads
droRho1
TAAACATA--TGAATAAGTTAATACCACCTT-----TTGGTTT------------------------------------T---T-------TA-------TTT-----------ACTTTTTTGGATTTATTATTTCAT--------------T--------------------------------TTCATT---TGCTTTTGAATTTT----------ATCCTTTCATTTTT--ATTTT---------------T---------------------------------------------------------------------------------------------------------------------------------------------A--------------------------GATTCTCAATTTACT-------------TA-TACAAATTTTTGCTTT---------------------------------------------------------------------------------------------------------CTTTACTTTGAT---------------------------------TTT-----------TTCTTGAATTTTCTTTTCCTTTACAATTTCATACA---------------CATTTTATTTTCA------GA-CATAT-----------TT--------------------------------TAATTGCATTT-A----------AAAA-GAAAATAGACA---A-------T---T-TCAATT------AACAAC-AGGAAGTG-TTTTGG--ATSizeHit CountTotal NormTotal
No Reads
droFic1
ACAGCATT--TAAATGAGTTGATGCAAATAT-----TTCATTT------------------------------------C---TTTTTGA--GTTTACCTTTT-----------TATTTTTTGAGTTCAT----------------------T--------------------------------TTTATT---TTCTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTTATTTTG---------------------------------ATT-----TTG----------------------C-TA---------------------------------------------T--AACTTGTTGGT-------------AAA-AAAAATAGACA---AATGGCT-A---TAATGATT------GACCGA-AGGATGTG-TTTTGGAAATSizeHit CountTotal NormTotal
No Reads
droKik1
TAAACATT-GTGAAAGAGATCAACATGCATT-----TTGGTTT------------------------------------T---CC-------C-------TTTA----------ATTTTCTTCAAAATTTTAT---AT--------------T--------------------------------TTCAGTTTTGGCATTTGAAATTTT---ATTTTCTTTTATATACATTT--TCTTT---------------AAATTTCTC-----------TTT---TCTCTAATTTTT-CTTATTCTTTATCAAATTTATTTTCT---------------------TTTTTATTTCATTT-----------------------------------------------------TTTCTTATAACATT-----------------------------------------------------AACA-------------------------------------------------------------------------------------CACTTTGGTTGT--TTCCTTTAATTTTATATAACATTTTATTTTCCTTTCTTTACATTCTT---A--------------------------------------------------------AACTGTATTGTAA------AT-GTAA------------TT--------------------------------TA-----ATT----------------------------------TTGCA-T---C-TTGAAC------AATCAC-CAATTACG-TTTTGGAAATSizeHit CountTotal NormTotal
No Reads
droAna3
TAGAAACA--CCGAGTGGTTCAATCTGCAGT-----TCAATTT---------------------------TTTCCTTAT-TTTC------------------------------------ATTAAC------------TTTTTAAGTCA-TT-TTTTCAAAT-T-----TACTT---------------------------------TTTTCA--------------------------TTTCACTTTAATT----------------------------------------------------------------------------------------------------------------------------------------TT-----AATTTTTTAAAT----------------------------TACATTTTCAA---------------------------------------------------T------------------------------------------------------------------------------------------------------------ACTTTTTTTTACACTTCTGAAGATTAACTTTTTTT-----------------------------------GTTTT-TA-----C-------TTTTTTGATTTC-ATTT--------TT-----------------------------A--ATTTCGCAGTTTG----------AAACTGAAAGCAAACA---A----C------T-TTGGTT------TGT------ATAGTG-TTTTGG-AATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAGCAAACA---A----C------T-TTGGTT------T.........................2311.001001000
droBip1
TGGAAACACCTCACATGGTTCATCCTGCATTACTATTTGGTTT------------------------------CCTTAT-TTTC------------------------------------ATTA-----TATT---C-TTTTTTAGTTAATA-TTTTCATAT-T-----TC-T-TT---------CGATTT---CGATTTTGAGTTTT------------------------------------CTTTATTT----------------------------------------------------------------------------------------------------------------------------------------TT-----AATTTTCTTA-T----------------------------T-------------------------------------------------A------------------------------------------------------------------------------------------------------------------------ACTTTTCTTTACATTTTTGAAGCTTTATTTTT---------------------------------GTTTTATTTT-TA-----C-------TTTTTTGA-TTC-A--------TTTTTGTT--------------------------T--ATTTCGCAGTTTG----------AAACTGAAAGCAAACA---T-------C---A-TTGGTT------T------GTATAGTG-TTTTGG-AATSizeHit CountTotal NormTotal
No Reads
dp5
TAAGCATT--G-AACAAATTTC----------------AGATCGCCCTTCAAATGTGTGTCGAATAATTCTTGCCTCTT-TTTC------GGT-----------TATGATTTAT------------------------TGTTTAAGACA-TT-TTTT-----------TG-TTT------------------------------------------TTTTTTA----------------ATTTTCTTTAATTTTGATTTCT-----------A---------------------TTATTTGCCATTAATTTCATTTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTGTATTATTATTTTTTGAATTTTTATACCCTGCAAGGCCTACGAGACTATAGCCTCGATCTGTGGAACGATCGGCCTGTATGAGTTATTTTTCATTTAAT-----------------------------------------------TTCTTGCA-----------------------------------TTTT-TA-----T-------TTTCCTTATTTC-ATTTCATTATCATTATCAAACATCACTGAAT-------GTTTTGGTTGTTCGCATTT-C----------AGAC-AAAATCAGAGA---AGAAATT-T--TA-TTTAATGGCTAAG-TTGC-TGGAAGTG-TTTCGGGAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAG-TTGC-TGGAAGTG-TTTCG.....2115.0050200001200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCATTATCAAACATCACT.................................................................................................................2114.0040000000040
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-TTGC-TGGAAGTG-TTTCGG....2114.0040100003000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGGAACGATCGGCCT..............................................................................................................................................................................................................................................................................................2014.0040200000110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AGAAATT-T--TA-TTTAATGGCT............................2113.0030000000030
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--TA-TTTAATGGCTAAG-TTG.....................2013.0030300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-TTGC-TGGAAGTG-TTTCGGG...2113.0030300000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATACCCTGCAAGGCCTA..................................................................................................................................................................................................................................................................................................................................2113.0030300000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATAGCCTCGATCTGTG...........................................................................................................................................................................................................................................................................................................2113.0030100000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTGTTCGCATTT-C----------AGA....................................................................2112.0020100000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTGAAT-------GTTTTGGTTGT...........................................................................................2112.0020100000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCAAACATCACTGAAT-------G.....................................................................................................2112.0020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCCTCGATCTGTGGAAC.......................................................................................................................................................................................................................................................................................................2112.0020100001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-TGGAAGTG-TTTCGGGAA.2012.0020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-TTGC-TGGAAGTG-TTTCG.....2012.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------GTTTTGGTTGTTCGCATTT-..................................................................................2112.0020100001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTGTTCGCATTT-C----------AG.....................................................................2012.0020000101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACTGAAT-------GTTTTGGTTG............................................................................................2112.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------GTTTTGGTTGTTCGCATTT-C----------.......................................................................2112.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTGTGGAACGATCGGC................................................................................................................................................................................................................................................................................................2112.0020100000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGATCGGCCTGTATGAG.......................................................................................................................................................................................................................................................................................2012.0020000000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGATCGGCCTGTATG.........................................................................................................................................................................................................................................................................................1912.0020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCCTCGATCTGTGGAA........................................................................................................................................................................................................................................................................................................2012.0020100001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-TGGAAGTG-TTTCGGGA..2012.0020100100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAACGATCGGCCTGTATGAG.......................................................................................................................................................................................................................................................................................2412.0020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATAGCCTCGATCTGT............................................................................................................................................................................................................................................................................................................2012.0020000000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGGAACGATCGGCC...............................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAT-------GTTTTGGTTGTTCG........................................................................................1911.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACTATAGCCTCGATCTG.............................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................A----------------ATTTTCTTTAATTTTGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGGAACGATCGGCCTG.............................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTT-C----------AGAC-AAAATCAGAGA---....................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-TGGAAGTG-TTTCGGGAA.2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTAAG-TTGC-TGGAAGTG-..........2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGATCGGCCTGTATGA........................................................................................................................................................................................................................................................................................2011.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGACTATAGCCTCGATCTG.............................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-C----------AGAC-AAAATCAGAGA---A...................................................2111.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGCTAAG-TTGC-TGGAA..............2011.0010000001000
.........................................TCGCCCTTCAAATGTGTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGC-TGGAAGTG-TTTCGGGA..2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTCGATCTGTGGAACGATCGGC................................................................................................................................................................................................................................................................................................2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCGGCCTGTATGAGTT.....................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTACGAGACTATAG.......................................................................................................................................................................................................................................................................................................................1811.0010000000010
......................................................................................................................................................................................................................................................................................................................TCATTTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTGTATTA....................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCTCGATCTGTGGAACG......................................................................................................................................................................................................................................................................................................2111.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCCTCGATCTGTGGAACA......................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACCCTGCAAGGCCTACGA...............................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGTGGAACGATCGGC................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGATCGGCCTGTATGA........................................................................................................................................................................................................................................................................................2111.0010000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTACGAGACTATAGCCT....................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAT-------GTTTTGGTTGTTC.........................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATACCCTGCAAGGCC....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCGGCCTGTATGA........................................................................................................................................................................................................................................................................................1811.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGC-TGGAAGTG-TTTCGG....1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTT-C----------AGAC-AAAATCAGA.........................................................2111.0010100000000
...................TTC----------------AGATCGCCCTTCAAATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-TTGC-TGGAAGTG-TTTCGGA...2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGA---AGAAATT-T--TA-TTT...................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAG-TTGC-TGGAAGTG-TTTC......2111.0010000001000
.....................C----------------AGATCGCCCTTCAAATGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAATTTTTATACCCTGCA.........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCATTATCAAACATCACA.................................................................................................................2211.0010100000000
.....................................................TGTGTGTCGAATAATTCTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGCCTCGATCTGTGGAA........................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTAAG-TTGC-TGGAAGTG-T.........2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGATCTGTGGAACGATCG..................................................................................................................................................................................................................................................................................................2211.0010000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGAAT-------GTTTTGGTTGTT..........................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGCCTCGATCTGTGGA.........................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGATCTGTGGAACGATC...................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTTAATGGCTAAG-TTGC-TGG................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATACCCTGCAAGGCCT...................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................ATGTGTGTCGAATAATTCTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACGATCGGCCTGTATGAG.......................................................................................................................................................................................................................................................................................2111.0010000000010
............AACAAATTTC----------------AGATCGCCCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTGTTCGCATTT-C----------AG.....................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCCTGCAAGGCCTACG................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCTACGAGACTATAGCCTA...................................................................................................................................................................................................................................................................................................................2211.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAT-------GTTTTGGTTGTTCGC.......................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-TTGC-TGGAAGTG-TTTCGG....2011.0010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGCCTCGATCTGTGGAACGATCGG.................................................................................................................................................................................................................................................................................................2811.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTGTGGAACGATCG..................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATACCCTGCAAGGCCTAC.................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCGGCCTGTATGAG.......................................................................................................................................................................................................................................................................................1911.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTATAGCCTCGATCTGTGG..........................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATACCCTGCAAGGCC....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCACTGAAT-------GTTTTGG...............................................................................................2011.0010100000000
droPer2
TAAGCATT--G-AACAAATTTC----------------AGATCGCCCTTCAAATGTGTGTCGAATAATTCTTGCCTCTT-TTTC------GGT-----------TATGATTTAT------------------------TGTTTAAGACA-TT-TTTT-----------TG-TTT------------------------------------------GTTTTA-----------------ATTTTCTTTAATTTTGATTTCT-----------A---------------------TTATTTGCCATTAATTTCATTTCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTGTATTATTATTTTTTTAGTTTTTATACCCTGCAAGGCCTACGAGACTATAGCCTCGATCTGTGGAACGATCGGCCTGTATGAGTTATTTTTCATTTAAT-----------------------------------------------TTCTTGCA-----------------------------------TTTT-TA-----T-------TTCCCTTATTTC-ATTTCATTATCATTATCAAACATCAGTGAAT-------GTTTTGGTTGTTCGCATTT-C----------AGAC-AAAATCAGAGA---AGAAATT-T--TA-TTTAATGGCTAAG-TTGC-TGGAAGTG-TTTCGGGAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......T--G-AACAAATTTC----------------AGATCGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGC-TGGAAGTG-TTTCGGGA..2113.003000003
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAT-------GTTTTGGTTGTTCG........................................................................................2012.002000002
............AACAAATTTC----------------AGATCGCCCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATTTAAT-----------------------------------------------TTCTTGCA-----------------------------------T............................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTAAG-TTGC-TGGAAG.............2011.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-TTGC-TGGAAGTG-TTTCGG....2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAG-TTGC-TGGAAGTG-TTTCG.....2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTATTTTTCATTTAAT-----------------------------------------------T.......................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGCCTCGATCTGTGGA.........................................................................................................................................................................................................................................................................................................2011.001000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCTCGATCTGTGGAACGA.....................................................................................................................................................................................................................................................................................................2111.001000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTTGTTCGCATTT-C----------AGA....................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGAAT-------GTTTTGGTTGTTC.........................................................................................2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGGAACGATCGGCCT..............................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCGGCCTGTATGAGTTA....................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGATCTGTGGAACGAT....................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
TCATTTTG--A--A---------ATTA------------ATTT---------------------------TTTTTTTAT-TTTT------GTT-----------TACGATTCTC------------------------CATTCTATATT-TT-TCTT-----------TA---------------------------TCTTGAAGCAT-----------------------------------------------------------------------------AATTTTTTTT-----------------------------------------------------------TCATATTCTTTTGATTCTCGATCTAAATTTTCATTAATTTTTATTTTTTTGAT----------------------------T--ATTTTTAATAGTTTTT------TTTCTTTAGTT-TCA---G------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------TTATT-----TTC----------------------C---T-------------A------------------------------T--TTTTTGCATGTAA----------AAAATCAAAACACAGAGTTTGCCATT-TTTCA-TTTTACAAACAAG-T----CAAAAATATCTTTGGAAGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACAGAGTTTGCCATT-TT..........................................2011.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACACAGAGTTTGCCATT-............................................2111.00101000
droVir3
TACGTTTG--A--ACAAGTTTTTTCAA-ATT-----TCAT----------------------------------------TTTT------TCT-----------TATCATTTTC------------------------CATTCTTTATA-TT-TTTT-----------TT-TTG-TTTTTTCATTT-TTTA---TAT-TTTGTAAAAT----------TTCATTTTCACTTT--CTTTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCGTTTTCTATT----------------------------T--TTGTTTTATAGTTTTTCAAAAATTTCTTCATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-ATTTATTCATTTTTCTCA-----------ACTTAAAATCTTTCA--GAAACGCAAGT-C----------TA---AAAAATAAT-----AATGAAA-T---C-AAGATT------ACCCAGAGACACATA-TTGTGGAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-----------ACTTAAAATCTTTCA--GAAACGCAAG....................................................................................2813.003000000000000000000000000000010020000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCTTTCA--GAAACGCAAGT-C----------T......................................................................2513.003000000000000000000000000000030000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTTTTCAAAAATTTCTTCATT............................................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000010010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-A...........................................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................CACTTT--CTTTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAT-----AATGAAA-T---C-AAGATT------..........................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGAGACACATA-TTGTGGAAA.2411.001000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CATTTTCACTTT--CTTTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-----------ACTTAAAATCTTTCA--GAAA..........................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-----------ACTTAAAATCTTTCA--GAAACG........................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-............................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCTTCATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------T....................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCGTTTTCTATT----------------------------T--T...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCATTTTTCTCA-----------ACTTAAAATC.....................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAAAATCTTTCA--GAAACGCA......................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
....................................TCAT----------------------------------------TTTT------TCT-----------TATCATTTTC------------------------CATTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................TCT-----------TATCATTTTC------------------------CATTCTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----TTG----------------------C---C-ATTTATTCATTTTTCTCA-----------ACT............................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTTTT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................TT---------------GCAT----------------------------------------------------------------------------------------------------------------------------------TTATCTTTCGTTTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGTTTTTCAAAAATTTCTTCAT.............................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--GAAACGCAAGT-C----------TA---AAA...............................................................2011.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACACATA-TTGTGGAAAT2111.001000000000000000000000001000000000000000000000000000000000000000
..................................................................................TT------TCT-----------TATCATTTTC------------------------CATTCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----------------------C---C-ATTTATTCATTTTTCT............................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TCT-----------TATCATTTTC------------------------CATTCTTTATA-TT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-ATTTATTCAT..................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCTTTCA--GAAACGC.......................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTTTCA--GAAACGCAAGT-C----------TA---AAAAA.............................................................2811.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTATGA---T------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--------------------TTATT-----TTG----------------------C---C-AT..........................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TTGTTTTATAGTTTTTCAAAAATT....................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCATTTTTCTCA-----------ACTTAAAATCT....................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
droMoj3
TATATTTG--A--ACT---------T----T-----ACCGTT--------------------------------------TT-C-------TG-------TT--TCTAATTTTA---------------------------------------------GTTTTCATCAG-TT----TT------TTTTTT---TACATTT-----------------------------------------------------AATTTT----------------------------------TCATTCACAATTAATTTTCTTACACTCAATTTATTTTGGTTTATATTTTTCATTTTATTT-----------------------------------------------------TTTCTTTTCACGTTCAATTTAT--------------------------------------------------------CCCACATTA-----------------------------------------------------------------------------------TTCATTTA-------------------------------------T-----------TTCTT--------------------------------------------------AGT-------TTTTCATTTC-ATTTAATCATTATCATTTATTTTCCCTTAAT----TATCTTTCA-------GCAGGCAAAAGTTTCAATGA---AAAAATGT-------ATAAAA-T---T-TAAATC------AACTAGAGGGACATA-TTTTGGAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................TTATTT-----------------------------------------------------TTTCTTTTCACGTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAT----TATCTTTCA-------GCAGGC...................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................TCACAATTAATTTTCTTACAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTTTCACGTTCAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
TATGCTTG--A--AAAACTTTT----------------AGAAAGATTTT----------------------------TT-TTTT------GCT-----------TATCATTTCG---------------------------------------------CTTTACTTTAT-TA----TT------TTGCTA---TAAATTT-------------------TA-----------------CTTTTTTTTATTATTAATTTTA-----------A-TTA---TTTCGAAGTTTT-CTTAT-------GCTTTTCATATCA---------------------------------TTT----------------------------------------TTAGAT-TATACTTTTCTTTTGGACTTTCGTTAAT---------------------------------TTTTCATTCATGAATTCATTATTTTCTT------------------------------------------------------------------------------------------------------------------------TTCATTACGTTA---ATAATTAATTTTCATT-----------------------------------ATGTT-TA-----C-----------------------TAAT----TTTCTTA-----------ATTAAAACTCTTTCA-------------------------------GAA----------------------------------------GC--ACACGAA-ATTTGGAAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 10:14 PM