ID:

dse_517

 Coordinate:

scaffold_0:13929759-13929909 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -11.7 -11.6

Flybase annnotation

exon [dsec_GLEANR_8952:4]; CDS [Dsec\GM26034-cds]; intron [Dsec\GM26034-in]

Repeatable elements

NameClassFamilyStrand
DOCLINEJockey-
mature
  1. scaffold_472:13852-13878 +
  2. scaffold_524:4399-4425 +
  3. scaffold_565:4091-4117 -
  4. scaffold_631:479-505 +
  5. scaffold_783:3385-3411 -
  6. scaffold_2641:4083-4109 -
  7. scaffold_4724:506-532 +
  8. scaffold_10746:659-685 -
  9. scaffold_8392:1432-1458 -
  10. scaffold_1:8422758-8422784 -
  11. dse_517  scaffold_0:13929843-13929869 +
  12. scaffold_13658:586-612 +
  13. scaffold_13803:444-470 -
star
  1. scaffold_472:13793-13817 +
  2. scaffold_524:4340-4364 +
  3. scaffold_565:4152-4176 -
  4. scaffold_631:420-444 +
  5. scaffold_783:3446-3470 -
  6. scaffold_2641:4144-4168 -
  7. scaffold_4724:447-471 +
  8. scaffold_10746:720-744 -
  9. scaffold_8392:1493-1517 -
  10. scaffold_1:8422819-8422843 -
  11. dse_517  scaffold_0:13929784-13929808 +
  12. scaffold_13658:527-551 +
  13. scaffold_13803:504-528 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGATTCATTGTTCTAAGTCCACATATAACAATTACCAGAACAATATGGAATAATTATTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAACTTTCACTATACTGTTGTAGTTTTTAGAACTTGCTATTCGTAGCTTGAAAGAAACACGTCTCCACCCGAAGACTGTGGAATGTCTACTGAATAACCTGTACCTGGGTGCAGTGCAGCAGCA
***************************************************************************....................((((.((.((((((((....(((....(((.........))).....))))))))))).)).))))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
......................................................................................................................................CACTATACTGTTGTAGTTTTTAGAACT.......................................................................................... 27 0 13 0.92 12 12 0 0 0
..............................................................................................................................................................................................TCCACCCGAAGACTGTGGAATGTCTAC.................................. 27 0 5 0.60 3 3 0 0 0
.TGATTCATTGTTCTAAGTCCACATA................................................................................................................................................................................................................................. 25 0 13 0.46 6 6 0 0 0
...........................................................................TACTATAGTCAATAATTGTTAGTTG....................................................................................................................................................... 25 0 13 0.31 4 4 0 0 0
....................................................................................................................................................................TATTCGTAGCTTGAAAGAAACACGTC............................................................. 26 0 12 0.25 3 3 0 0 0
.......................................................................................................................................ACTATACTGTTGTAGTTTTTAGAACT.......................................................................................... 26 0 13 0.23 3 3 0 0 0
...........................................................................................TGTTAGTTGTGCAAACTGCACTT......................................................................................................................................... 23 0 13 0.23 3 1 1 0 1
...........................................................................................................TGCACTTTACACTTTGTGTTTAACT....................................................................................................................... 25 0 12 0.17 2 2 0 0 0
.................................................................................................................................................................TGCTATTCGTAGCTTGAAAGAAACACGTC............................................................. 29 0 12 0.17 2 1 1 0 0
................................................................................................................................................................TTGCTATTCGTAGCTTGATAGAAACACG............................................................... 28 1 12 0.08 1 1 0 0 0
......................................................................................................................................................................TTCGTAGCTTGAAAGAAACACGTCTCC.......................................................... 27 0 12 0.08 1 1 0 0 0
.................................................................................................................................................................TGCTATTCGTAGCTTGAAAGAAACACGT.............................................................. 28 0 12 0.08 1 0 1 0 0
....................................................................................................................................................................TATTCGTAGCTTGAAAGAAACACGT.............................................................. 25 0 12 0.08 1 1 0 0 0
.......................................................................................................................................................................TCGTAGCTTGAAAGAAACACGTCTCC.......................................................... 26 0 12 0.08 1 1 0 0 0
....................................................................................................TGCAAACTGCACTTTACACTTTGTGTT............................................................................................................................ 27 0 12 0.08 1 1 0 0 0
.........................................................................................................................................................TTAGAACTTGCTATTCGTAGCTT........................................................................... 23 0 12 0.08 1 0 1 0 0
...........................................................................................................................................................................AGCTTGAAAGAAACACGTCTCCACC....................................................... 25 0 12 0.08 1 1 0 0 0
...............................................................................................................................................................................TGAAAGTAACACGTCTCCACCCGA.................................................... 24 1 12 0.08 1 0 1 0 0
....................................................................................................................................................................TATTCGTAGCTGGAAAGAAACACGTC............................................................. 26 1 12 0.08 1 1 0 0 0
..............TAAGTCCACATATAACAATTACCAGAAC................................................................................................................................................................................................................. 28 0 12 0.08 1 1 0 0 0
................................................................................................................................................................TTGCTATTCGTAGCTTGAAAGAAACA................................................................. 26 0 12 0.08 1 0 1 0 0
..........................TAACAATTACCAGAACAATATGGA......................................................................................................................................................................................................... 24 0 12 0.08 1 1 0 0 0
.....................................................................................................................................................................ATTCGTAGCTTGAAAGAAACA................................................................. 21 0 12 0.08 1 1 0 0 0
...........................................................................................................................................TACTGTTGTAGTTTTTAGAACTTGCTA..................................................................................... 27 0 13 0.08 1 0 1 0 0
........................................................................................................................TTGTGTTTAACTTTCACTATACTGT.......................................................................................................... 25 0 13 0.08 1 1 0 0 0
..........................................................................................................................................................TGGAACTTGCTATTCGTAGCT............................................................................ 21 1 13 0.08 1 1 0 0 0
.TGATTCATTGTTCTAAGTCCACAG.................................................................................................................................................................................................................................. 24 1 13 0.08 1 1 0 0 0
..............................................................................TATAGTCAATAATTGTTAGTTGTGCA................................................................................................................................................... 26 0 13 0.08 1 1 0 0 0
..............TAAGTCCACATATAACAATTACC...................................................................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0
..............................................................................................................................TTAACTTTCACTATACTGTTG........................................................................................................ 21 0 13 0.08 1 1 0 0 0
.........................................................................................................................................TATACTGTTGTAGTTTTTAGAACTTGC....................................................................................... 27 0 13 0.08 1 0 0 1 0
.............................................................................CTATAGTCAATAATTGTTAGT......................................................................................................................................................... 21 0 13 0.08 1 0 0 1 0
..............TAAGTCCACATATAACAATTACCAG.................................................................................................................................................................................................................... 25 0 13 0.08 1 1 0 0 0
..............................................................................TATAGTCAATAATTGTTAGTTGTGC.................................................................................................................................................... 25 0 13 0.08 1 0 1 0 0
...............................................................................................................................TAACTTTCACTATACTGTTGT....................................................................................................... 21 0 13 0.08 1 0 0 0 1
.........................................................................................................................................................................................ACGTCTCCACCCGAAGACTGTGGAAT........................................ 26 0 13 0.08 1 1 0 0 0
.............................................................................................................................TTTAACTTTCACTATACTGTTGTAGT.................................................................................................... 26 0 13 0.08 1 1 0 0 0
...................................................................................................................................TTTCACTATACTGTTGTAGTTTTTAGA............................................................................................. 27 0 14 0.07 1 1 0 0 0
......................................................................................................................................CACTATACTGTTGTAGTTTTTAGAAC........................................................................................... 26 0 14 0.07 1 1 0 0 0
......................................................................................................................................CACTATACTTTTGTAGTTTTTAGAAC........................................................................................... 26 1 14 0.07 1 1 0 0 0
...................................................................................................................................TTTCACTATACTGTTGTAGTTTTTAG.............................................................................................. 26 0 14 0.07 1 1 0 0 0
TTGATTCATTGTTCTAAGTCC...................................................................................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0
.................................................................................................................................ACCTTAACTGTACTGTTGT....................................................................................................... 19 3 20 0.05 1 0 0 1 0
...........................................................................................................................................................AGAACTTGCTAGTCGAAGG............................................................................. 19 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

AACTAAGTAACAAGATTCAGGTGTATATTGTTAATGGTCTTGTTATACCTTATTAATAAATAAAATCATTTATTAATGATATCAGTTATTAACAATCAACACGTTTGACGTGAAATGTGAAACACAAATTGAAAGTGATATGACAACATCAAAAATCTTGAACGATAAGCATCGAACTTTCTTTGTGCAGAGGTGGGCTTCTGACACCTTACAGATGACTTATTGGACATGGACCCACGTCACGTCGTCGT
******************************************************************************************....................((((.((.((((((((....(((....(((.........))).....))))))))))).)).))))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
......................................................................................................................GAAACACAAATTGAAAGTGATATGAC........................................................................................................... 26 0 12 0.25 3 1 2 0 0
......GTAACAAGATTCAGGTGTAT................................................................................................................................................................................................................................. 20 0 13 0.15 2 2 0 0 0
............................................................................TGATATCAGTTATTAACAATCAACA...................................................................................................................................................... 25 0 13 0.15 2 2 0 0 0
........................................................................................................TTGACGTGAAATGTGAAA................................................................................................................................. 18 0 12 0.08 1 0 1 0 0
..........................ATTGTTAATGGTCTTGTTATACCTT........................................................................................................................................................................................................ 25 0 12 0.08 1 1 0 0 0
.........................TATTGTTAATGGTCTTGTTATACCTT........................................................................................................................................................................................................ 26 0 12 0.08 1 1 0 0 0
...........................TTGTTAATGGTCTTGTTATACCTT........................................................................................................................................................................................................ 24 0 12 0.08 1 1 0 0 0
.............................GTTAATGGTCTTGTTATACCTT........................................................................................................................................................................................................ 22 0 12 0.08 1 1 0 0 0
.............GATTCAGGTGTATATTGTTAATGGTCT................................................................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0
.......................................................................................................................AAACACAAATTGAAAGTGATATGAC........................................................................................................... 25 0 12 0.08 1 1 0 0 0
............................TGTTAATGGTCTTGTTATA............................................................................................................................................................................................................ 19 0 12 0.08 1 0 1 0 0
.....................TGTATATTGTTAATGGTCTTG................................................................................................................................................................................................................. 21 0 12 0.08 1 0 0 0 1
....................................................................................................ACGTTTGACGTGAAATGTGAA.................................................................................................................................. 21 0 13 0.08 1 0 0 1 0
.....................................................................................................CGTTTGACGTGAAATGTGAA.................................................................................................................................. 20 0 13 0.08 1 0 0 1 0
................................................................................................................................................................................................GTGGGCTTCTGACACCTTACA...................................... 21 0 13 0.08 1 1 0 0 0
..............................................................................................ATCAACACGTTTGACGTGAAATGTGAA.................................................................................................................................. 27 0 13 0.08 1 0 1 0 0
......................................................................................................................TAAACACAAATTGAAAGTGATATGAC........................................................................................................... 26 1 13 0.08 1 1 0 0 0
....................................GTCTTGTTATACCTTATTAAT.................................................................................................................................................................................................. 21 0 13 0.08 1 1 0 0 0
..........CAAGATTCAGGTGTATATTGTTAA......................................................................................................................................................................................................................... 24 0 13 0.08 1 0 0 0 1
.ACTAAGTAACAAGATTCAGGTGT................................................................................................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0
.................CAGGTGTATATTGTTAATGG...................................................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0
....AAGTAACAAGATTCAGGTGTATATT.............................................................................................................................................................................................................................. 25 0 13 0.08 1 0 1 0 0
......................................................................................................................ACAACACAAATTGAAAGTGATATGAC........................................................................................................... 26 2 13 0.08 1 0 0 0 1
...............................................................................................................................................................................................GGTGGGCTTCTGACACCTTAC....................................... 21 0 13 0.08 1 1 0 0 0
...............TTCAGGTGTATATTGTTGATGGT..................................................................................................................................................................................................................... 23 1 13 0.08 1 0 0 1 0
.........................................................................................................................ACACAAATTGAAAGTGATATGAC........................................................................................................... 23 0 13 0.08 1 0 0 1 0
.ACTAAGTAACAAGATTCAGGTGTAT................................................................................................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0
........................................................................................................................AACACAAATTGAAAGTGATATGAC........................................................................................................... 24 0 13 0.08 1 0 1 0 0
.................................................................................................................................TGAAAGTGATATGACAAC........................................................................................................ 18 0 14 0.07 1 0 1 0 0
..........................................................................................................................................TATGGCAACATCAGAACTCT............................................................................................. 20 3 19 0.05 1 1 0 0 0
..........................................................................................AACAACCAACACGTATGACC............................................................................................................................................. 20 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_0:13929709-13929959 + dse_517 TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTCCACCCGAAG-ACTG---T-GGAA-------TGT-CT---------ACT--G----------AATAACCTGTA-CCTGGGTGCAGTGCAGCAGCA
droSim2 node_117782:2396-2596 + TTGATTCATT--------GCTTT--AAGTC-CAAA-G-----ATAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGCCAATAATTGTTAGTTGTGCGAACTGCACTTTGCACTTTGTGTTCAA----------CTTTCACTACATC--AGTA-GTT---TT--------------------AGAAATT-------GCTATTCGTAGCTAAAA-AAGAAACGCGTTTGCACTCGCCG-AC----------------------------------------------------------------------------------
dm3 chr3LHet:877824-878063 - TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTCCACCCGAAG-ACTG---T-GGAA-------TGC-CGAATGCGGCG-C--------------------CTAT--A----------TTGGGATGCA
droEre2 scaffold_4929:25002743-25002823 - TTGACTTATT--------GTATT--AGTTT-GCTT-T-----ATAGTAT---AATAGTTGTA--TAA-------GACA---AATT------------------A----ATTG--------CACA--------------------------------------------------------ACTATTTTAGTAAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr3h_random_002:350448-350682 + TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTGCACTCGCCG-ACGT---T-CGAT--------TC-CG-C--------TC---------CAACTATGTT--GAA-C---------CT-------GG
droEug1 scf7180000408895:2331-2572 + TAAACTCATT--------GCAGTCGAGGTTG-AGTTAGTTAGAA-TT--------------------AGTGTTATGTTTTATATT------------------A----ATTAATTAATTAATCAATATAAACATTA-----------GCGA-TTTTCATCGCTGAAAACGTCTTTTCGCG-TTG--------------------------------------------------------------TTTT-GGTTTACGAAACCATTCACTGCACTTTTTTGGATAT--T-----------------ATTGAATACTTTATTTTTTTCCCCCGGAGCACAATAAAAATACACGTCTGCATACGGCG-ACGG---TCGCGA-------ATATTG---------ATT--G---------------------------------A-------AT
droBia1 scf7180000302388:9273-9490 + TTGAGTGC-------GCTGATCC--ACGTT-CTTA-A-----TCAT----TTGTTTATT-GA--TAG-------TGCG---TAAA------------------G----ATTAATTAATTAATTAATTAGAACTTTAGTTTACGATTTGCTA-TTAGCATCGCGAAACGCAAAACCTCGCG-TTA-------------------------------------------------------------------A----------------------------TA-AATT-TTTCGACCGTTTTTGACTGAGTGAATA------ATTGTTTTTCCGGAGCGTTAA--GAAAACACGACTACACGCAACC-GAAC---T---------------------------------------------------GAATA---------AT-------GT
droTak1 scf7180000414083:7377-7561 + TTTGTTTATT--------GTT--------------------------------------------AG-------TGCG---TAAA------------------G----ATTAATTAATTAAATAATTTAAACTTTAGTTTACAATATGCGA-TTAGCATCGCGAATCGCAAA------------------------------------------------------------------------------------------------ACTACACTGTTCTA-AATT--TTCGAAAATTTACGACTGGTTGAATA------ATTGTTTTTCCGGAGCGTTAA--GAAAACACGTCTACACGCGACCGACAA---T-GAAA-------T---------------------------------------------------------------
droEle1 scf7180000490338:1623-1871 + TTTGGCGTTGAGTGCGCTGATCC--ACGTT-CTTA-C-----TCAT----TTATTGAT-------AA-------AGCG---TAAT-----------------------ATTAATTAATTAATTAATGAAAACTTTAGTTTCCGATACGCGAATTAGCATCGCGAATCGCAAAACCTCGCG-TTT-------------------------------------------------------------------A----------------------------TA-AATTTTTTCGAACGTTTTCGATTTTGTGGCTT------TTTGTTTTTCCGGAGCGTTAA--GAAAACACGTCTACAAGCGACG-GAAA--TT-GAAA-------AGTCTG-T--------TT--G----AGC---------AGGT--GTTGGTTGTAAT-------GC
droRho1 scf7180000773333:234-495 + CAGACTCATT--------GTATTTGTGGTAA-AGTTAATTAGAG-TTTTA-----------------AGTGTTAAGTTTTATATT------------------A----ATTAAATGACAAATCAATATAAACATTC-----------GCGAT-T-TCATCGCTGAAAGCGTCTTTTCGCG-TTA--------------------------------------------------------------TAGTAGATTTATTAAATCGGTCACTGCACTTTTGTG-ATTT--T-----------------ATTGAATACTT-------TTTTTCCGGAGCACAAT--AAATACACGTCTGCATGCGACG-ACGG---T-TTAATTTGGAATGGCAG-T--------TC--GCAACTGT-------------------AATTCTGCGGTGCAGCA
droFic1 scf7180000454032:7574-7854 - TTGACTCGTG--------GCTTTACTAGTTGCACT-TATTATTG-------ATTTGCCCGCAGGCATTGTATTTTGTTTGAGATTAATTGTTTTCTTCACTTTGATCTGTTAGAAAACTAGGTAATGGAGCTAATA------------TGATTTGGCATTGCTGCCAGCGTCTTTTCGCTACTA----------------------------------------------------------TTTCAGTTTTT----------ATTTCACTTAAATATCGAG---CT--A-----------------ATT---GACTC-------GCTTGGCGGAGCGATCA--AGAAACACGTCTGCACGGGGCA-AAAG---T-AGAACT-----TGA-CT---------AGTAAACTAAACT-----------AAA-C----ATGCAATGCAAC----
droKik1 scf7180000302619:501315-501348 + TGAACAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATT-TCTGGGCGCAGTGCAGCAGCA
droAna3 scaffold_8987:3888-4151 + TGAACTCATT--------GCAGTCGAGGTTG-ATTTAGTTTGAG-TTTTA-----------------AGTGTTGTGTTTTATATT------------------AATTAATTAATTAATTAATCAATATAAACATTA-----------GCGAT-T-TCATCGCAAAAAGCGTCTTTTCGCG-TTA--------------------------------------------------------------TTGTAGATTTCTTAGAGCAGTCACTGCACTTTTATG-ATTT--T-----------------ATTGAATT------TTTTTTTTCCCGGAGCACAAT--AAAAACACGTCTGCATGCGACG-ACTGCAAT-GAAA-------TGTCCG-A--------C--------------------CTGCATGATGAGTGCAAGGAAGTAGAA
droBip1 scf7180000395319:11010-11257 + TAGACTTATT--------GCAATCGAGGTTG-AGTTTGTTCGAG-TTTTA-----------------AATGTTATGTTTTATATT------------------A----ATTTATTAAATAATCAATATAAACATTA-----------GCAAT-T-TCATCGCTGAAAGCGTTTTTTCGCG-TTG--------------------------------------------------------------TTGTTGATTTACGAAACCAGTCACTGCACTTTTTTG-ATAT--T-----------------ATTGAATAC-T-------TTTTCCCGGAACACAAT--AAATGCACGTCTGCATGCGACG-ACGA---T-GCGA-------TTT-CGATTTCGAT------A----------AATAATATAT------------AT-------TT
dp5 2:22825064-22825095 - AACAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTT-CTTGGGCGCCGTACAGCTGCA
droPer2 scaffold_3:5602955-5602986 - AACAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTT-CTTGGGCGCCGTACAGCTCCA
droWil2 scf2_1100000004968:1691952-1692014 + AGCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCTTATCCTCATCACTTGC-AATCGTCT-AACTGCATTTTACACCCTGTGTTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:9499736-9499769 - TGAACAATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TCTAGGCGCAGTGCAGCAGCA
droMoj3 scaffold_6540:24570093-24570126 - TGAACAATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA-TCTGGGTGCAGTGCAGCAGCA
droGri2 scaffold_14830:1925501-1925532 - AACAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TGTGGGTGTAGTGCAGCAGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTCCACCCGAAG-ACTG---T-GGAA-------TGT-CT---------ACT--G----------AATAACCTGTA-CCTGGGTGCAGTGCAGCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................27130.921212000
...................................................................................................................................................................................................................................................................................................................................................................TCCACCCGAAG-ACTG---T-GGAA-------TGT-CT---------AC...............................................2750.6033000
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----A........................................................................................................................................................................................................................................................................................................................................................................................................................25130.4666000
......................................................................................................................................................................................................TACTATAGTCAATAATTGTTAGTTG....................................................................................................................................................................................................................................25130.3144000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGTC................................................................................................26120.2533000
............................................................................................................................................................................................................................................................................ACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................26130.2333000
......................................................................................................................................................................................................................TGTTAGTTGTGCAAACTGCACTT......................................................................................................................................................................................................................23130.2331110
......................................................................................................................................................................................................................................TGCACTTTACACTTTGTGTTTAA----------CT..........................................................................................................................................................................................25120.1722000
.............................................................................................................................................................................................................................................................................................................................T-------GCTATTCGTAGCTTGAA--AGAAACACGTC................................................................................................29120.1721010
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCTCC.............................................................................................27120.0811000
.............................................................................................................................................................................................................................................................................................................................T-------GCTATTCGTAGCTTGAA--AGAAACACGT.................................................................................................28120.0810010
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGT.................................................................................................25120.0811000
..........................................................................................................................................................................................................................................................................................................................................TCGTAGCTTGAA--AGAAACACGTCTCC.............................................................................................26120.0811000
...............................................................................................................................................................................................................................TGCAAACTGCACTTTACACTTTGTGTT.........................................................................................................................................................................................................27120.0811000
.................................................................................................................................................................................................................................................................................................TT--------------------AGAACTT-------GCTATTCGTAGCTT................................................................................................................23120.0810010
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTCCACC..........................................................................................25120.0811000
......................T--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--C..................................................................................................................................................................................................................................................................................................................................................................................................28120.0811000
............................................................................................................................................................................................................................................................................................................................TT-------GCTATTCGTAGCTTGAA--AGAAACA....................................................................................................26120.0810010
...........................................TAA----CAATTACCAGAA--CAA-------TATG---GA................................................................................................................................................................................................................................................................................................................................................................................24120.0811000
........................................................................................................................................................................................................................................................................................................................................ATTCGTAGCTTGAA--AGAAACA....................................................................................................21120.0811000
................................................................................................................................................................................................................................................................................TACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTA..........................................................................................................................27130.0810010
...................................................................................................................................................................................................................................................TTGTGTTTAA----------CTTTCACTATACTGT.............................................................................................................................................................................25130.0811000
.TGATTCATT--------GTTCT--AAGTC-CACA-G-----.........................................................................................................................................................................................................................................................................................................................................................................................................................24130.0811000
.........................................................................................................................................................................................................TATAGTCAATAATTGTTAGTTGTGCA................................................................................................................................................................................................................................26130.0811000
......................T--AAGTC-CACA-T-----ATAA----CAATTACC.........................................................................................................................................................................................................................................................................................................................................................................................................23130.0811000
.........................................................................................................................................................................................................................................................TTAA----------CTTTCACTATACTGTTG...........................................................................................................................................................................21130.0811000
..............................................................................................................................................................................................................................................................................TATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................27130.0810001
........................................................................................................................................................................................................CTATAGTCAATAATTGTTAGT......................................................................................................................................................................................................................................21130.0810001
......................T--AAGTC-CACA-T-----ATAA----CAATTACCAG.......................................................................................................................................................................................................................................................................................................................................................................................................25130.0811000
.........................................................................................................................................................................................................TATAGTCAATAATTGTTAGTTGTGC.................................................................................................................................................................................................................................25130.0810010
..........................................................................................................................................................................................................................................................TAA----------CTTTCACTATACTGTTGT..........................................................................................................................................................................21130.0810100
..............................................................................................................................................................................................................................................................................................................................................................ACGTCTCCACCCGAAG-ACTG---T-GGAA-------T...............................................................26130.0811000
........................................................................................................................................................................................................................................................TTTAA----------CTTTCACTATACTGTTGTA-GT......................................................................................................................................................................26130.0811000
........................................................................................................................................................................................................................................................................TTTCACTATACTGTTGTA-GTTT--TT--------------------AGA.........................................................................................................................................27140.0711000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAAC.......................................................................................................................................26140.0711000
........................................................................................................................................................................................................................................................................TTTCACTATACTGTTGTA-GTTT--TT--------------------AG..........................................................................................................................................26140.0711000
TTGATTCATT--------GTTCT--AAGTC-C...................................................................................................................................................................................................................................................................................................................................................................................................................................21140.0711000
droSim2
TTGATTCATT--------GCTTT--AAGTC-CAAA-G-----ATAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGCCAATAATTGTTAGTTGTGCGAACTGCACTTTGCACTTTGTGTTCAA----------CTTTCACTACATC--AGTA-GTT---TT--------------------AGAAATT-------GCTATTCGTAGCTAAAA-AAGAAACGCGTTTGCACTCGCCG-AC----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GA................................................................................................................................................................................................................................................................................................................................................................................24112.0012000000110010000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTAAAA-AAGAAACGCGTT................................................................................................2515.00500000011120000000
TTGATTCATT--------GCTTT--AAGTC-CAAA-G-----A........................................................................................................................................................................................................................................................................................................................................................................................................................2615.00500000013100000000
.........................................................................................................................................................................................................TATAGCCAATAATTGTTAGTTGTGCGA...............................................................................................................................................................................................................................2715.00500000003020000000
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GAA...............................................................................................................................................................................................................................................................................................................................................................................2513.00300000011001000000
..................................................................................................................................................................................................................TAATTGTTAGTTGTGCGAACTGCACT.......................................................................................................................................................................................................................2613.00300000011010000000
....................................................................................................................................................................................................................................ACTGCACTTTGCACTTTGTGTTCAA----------CT..........................................................................................................................................................................................2712.00200000000020000000
............................................................................................................................................................................................................................................................A----------CTTTCACTACATC--AGTA-GTT---TT--------------------AGA.........................................................................................................................................2612.00200000020000000000
......................................................................................................................................................................................................................................TGCACTTTGCACTTTGTGTT.........................................................................................................................................................................................................2012.00200000010010000000
....................................G-----ATAA----CAAGTGCCAGAA--CAA-------TATG---GA................................................................................................................................................................................................................................................................................................................................................................................2612.00200000011000000000
......................................................................................................................................................................................................................................TGCACTTTGCACTTTGTGTTA........................................................................................................................................................................................................2112.00200000000200000000
....................TTT--AAGTC-CAAA-G-----ATAA----CAAGTGCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000002000000000
.........................................................................................................................................................................................................................TAGTTGTGCGAACTGCACTTTGCACT................................................................................................................................................................................................................2612.00200000001010000000
..................GCTTT--AAGTC-CAAA-G-----ATAA----CAAGTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
....TTCATT--------GCTTT--AAGTC-CAAA-G-----A........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
..........................................................................TATG---GAAC------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTA...................................................................................................................................................................................................................................................................2511.00100000001000000000
..................................................................................................................................................................................................TAATTACTATAGCCAATAATTGTTAGT......................................................................................................................................................................................................................................2711.00100000000010000000
.....TCATT--------GCTTT--AAGTC-CAAA-G-----ATAA----CAAG.............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.................................................................................................................................................................................................................ATAATTGTTAGTTGTGCG................................................................................................................................................................................................................................1811.00100001000000000000
.........................................................................................................................................................................................................TATAGCCAATAATTGTTAGTTGTGC.................................................................................................................................................................................................................................2511.00100000001000000000
....................TTT--AAGTC-CAAA-G-----ATAA----CAAGTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.....................................................................................................................................................................................................................................CTGCACTTTGCACTTTGTGTTCAA----------CT..........................................................................................................................................................................................2611.00100000001000000000
.....................TT--AAGTC-CAAA-G-----ATAA----CAAG.............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------............................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------A----A......................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...........................................................GAA--CAA-------TATG---GAAC------------------A----ATT....................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...................................................................................................................................................................................................................AATTGTTAGTTGTGCG................................................................................................................................................................................................................................1611.00100000000001000000
.....TCATT--------GCTTT--AAGTC-CAAA-G-----A........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
......................................................................................................................................................................................................................................TGCACTTTGCACTTTGTGTTCAA----------CTT.........................................................................................................................................................................................2611.00100000000010000000
...........................................................................................................................................................................................................TAGCCAATAATTGTTAGTTGTGCGAAC.............................................................................................................................................................................................................................2711.00100010000000000000
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------A----AT.....................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTAAAA-AAGAAACGCGTTTGCACT..........................................................................................2711.00100000000010000000
.........................................................................................................................................................................................................TATAGCCAATAATTGTTAGTTGTGCG................................................................................................................................................................................................................................2611.00100000010000000000
......................................................TGCCAGAA--CAA-------TATG---GAAC------------------A----ATTA--------------------------------------------------------------------...............................................................................................................................................................................................................................................................................2411.00100000000010000000
.........................................................................................................................................................................................................TATAGCCAATAATTGTTAGTTGT...................................................................................................................................................................................................................................2311.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................AGCTAAAA-AAGAAACGCGTTTGC.............................................................................................2311.00100000000001000000
..................................................................................................................................................................................................................................................TTTGTGTTCAA----------CTTTCACTACATC--AGTA-........................................................................................................................................................................2811.00100000000010000000
..........................................................................................................................................................................................................ATAGCCAATAATTGTTAGTTG....................................................................................................................................................................................................................................2111.00100000000001000000
.....................TT--AAGTC-CAAA-G-----ATAA----CAAGTGCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................TATG---GAAC------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAA.................................................................................................................................................................................................................................................................2711.00100000001000000000
.TGATTCATT--------GCTTT--AAGTC-CAAA-G-----A........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.TGATTCATT--------GCTTT--AAGTC-CAAA-G-----ATAA----.................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...........................................TAA----CAAGTGCCAGAA--CAA-------TATG---GAAC------------------A----ATT....................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
................................................................................................................................................................................................................AATAATTGTTAGTTGTG..................................................................................................................................................................................................................................1740.25100000000001000000
..............................................................................................................TA--------------------------------------------------------------------TTTATTTTAGTAAA.................................................................................................................................................................................................................................................................1650.20100000000010000000
...ATTCATT--------GCTTT--AAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1560.17100000000001000000
dm3
TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTCCACCCGAAG-ACTG---T-GGAA-------TGC-CGAATGCGGCG-C--------------------CTAT--A----------TTGGGATGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................CT--AAGTC-CACA-T-----ATAA----CAATTACCAGA......................................................................................................................................................................................................................................................................................................................................................................................................272016.5533100000000000000000000000000000000000000000000003000000000001217000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000002940000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATAGTCAATAATTGTTAGTTGTGC.................................................................................................................................................................................................................................25208.7017400000000000000000000000000000000000002000000000000000000000000000000000000000000000070000000000000000000000000030000000000000000000000000006900000000047000000000000000000000000000000000000000000000002100000000000000003000000000000000000010000000000000000000000000000000000000000000000000000000000000000000200000000000000000190000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCG-C--------------------CTAT--A----------TTGGGATG..2134.33130000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000003000000000000000000000000000000000000000000000000000000000003000000100000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................TACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................25203.3567000000100000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320000024000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000002000000000
...................................................................................................................................................................................................................................................................................................................................................................TCCACCCGAAG-ACTG---T-GGAA-------TGC-CGAA........................................................27203.1062000000000000000000000000000000000000000000001000000000000010000000000000000000050000000000000000000000000000000001000000000000000000009120000000000100000000000000000000000000000000010000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGC.................................................................................................................................................................................................................................23203.00600000000000000000000000400000000000000000000000000300110000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CACCCGAAG-ACTG---T-GGAA-------TGC-CGAA........................................................25202.705400000000000000000000000000000000000000000000000000100000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080010000008000000001003000000000000000000000000000000000000000000000000000000010000000000000000000000000200000000000000000000000000
.........................................................................................................................................................................................................TATAGTCAATAATTGTTAGTTGT...................................................................................................................................................................................................................................23202.154300000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000300000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGAACTT-------GCTATTCGTAGCTT................................................................................................................21202.104200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003700000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................ATAGTCAATAATTGTTAGTTGTGC.................................................................................................................................................................................................................................24202.0541000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603000000000002001600000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAAC.......................................................................................................................................26202.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCG-C--------------------CTAT--A----------TTGGGATGC.2232.0060000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CACCCGAAG-ACTG---T-GGAA-------TGC-CGAAT.......................................................26201.753500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGTC................................................................................................26201.7535000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AG-ACTG---T-GGAA-------TGC-CGAAT.......................................................19201.703400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCTC..............................................................................................26201.703400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000020000300000100000004000000000000000000000000000000000000000000200000000000000000600000200000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCA................................................................................................................................................................................................................................24201.703400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCGGCG-C--------------------CTAT--A----------TTGGGA....1831.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCAA...............................................................................................................................................................................................................................25201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000002000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000001600000000000000000000000000000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCAAA..............................................................................................................................................................................................................................26201.653300000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................TGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................19201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000004002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATAGTCAATAATTGTTAGTTGTGCAA...............................................................................................................................................................................................................................26201.503000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000006001000000000000000000000000000000000000000000000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................T--TT--------------------AGAACTT-------GCTATTCGTAGC..................................................................................................................22201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................T--TT--------------------AGAACTT-------GCTATTCGTAGCTT................................................................................................................24201.352700000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACG..................................................................................................24201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000030000000030000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000012000000000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGA.........................................................................................................................................24201.102200000000000000000000000200000000000000001000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T-------GCTATTCGTAGCTTGAA--AGAAACACG..................................................................................................27201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCG-C--------------------CTAT--A----------TTGGGA....1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................TATAGTCAATAATTGTTAGTTGTGCAA...............................................................................................................................................................................................................................27201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000930060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCT...............................................................................................21200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGT...................................................................................................................................................................................................................................21200.851700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TT--TT--------------------AGAACTT-------GCTATTCGTAGCT.................................................................................................................24200.85170000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TACTATAGTCAATAATTGTTAGTTGT...................................................................................................................................................................................................................................26200.801600000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TCGTAGCTTGAA--AGAAACACGTCTCC.............................................................................................26200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400040000010000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000
....................................................................................................................................................................................................ATTACTATAGTCAATAATTGT..........................................................................................................................................................................................................................................21200.701400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000100110000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCG-C--------------------CTAT--A----------TTGGGATGCA2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTCCACC..........................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000003800000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCT...............................................................................................25200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................T-------GCTATTCGTAGCTTGAA--AGAAACACGT.................................................................................................28200.651300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATTCGTAGCTTGAA--AGAAACA....................................................................................................21200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000500000
.................................................................................................................................................................................................................................................................................................................................................................TCTCCACCCGAAG-ACTG---T-GGAA-------TGC-............................................................25200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000002000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TCTCCACCCGAAG-ACTG---T-GGAA-------TGC-CGA.........................................................28200.60120000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GAAG-ACTG---T-GGAA-------TGC-CGAAT.......................................................21200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTCCACCC.........................................................................................27200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................TATACTGTTGTA-GTTT--TT--------------------AGA.........................................................................................................................................21200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CACCCGAAG-ACTG---T-GGAA-------TGC-CGAATG......................................................27200.60120000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTCCACCCGAA......................................................................................25200.60120000000000000000000000000000000000000000000030004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACCCGAAG-ACTG---T-GGAA-------TGC-CGAATGC.....................................................2790.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000001000000000000000000000000
.....................................................................................................................................................................................................................................................GTGTTTAA----------CTTTCACTATACT...............................................................................................................................................................................21200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................T--------------------AGAACTT-------GCTATTCGTAGCT.................................................................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000900000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GAA--AGAAACACGTCTCCACCCGA.......................................................................................23200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000050000030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................TACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCT...........................................................................................................................26200.50100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCCGAAG-ACTG---T-GGAA-------TGC-CGAATG......................................................25200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000017000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATAGTCAATAATTGTTAGTTG....................................................................................................................................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000400000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................ATAATTGTTAGTTGTGCAAACTGCA.........................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGACTTATT--------GTATT--AGTTT-GCTT-T-----ATAGTAT---AATAGTTGTA--TAA-------GACA---AATT------------------A----ATTG--------CACA--------------------------------------------------------ACTATTTTAGTAAACGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................T------------------A----ATTG--------CACA--------------------------------------------------------ACTATTTTAG.....................................................................................................................................................................................................................................................................2020.5011000000
droYak3
TTGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TTTATTTTAGTAAATAATTACTATAGTCAATAATTGTTAGTTGTGCAAACTGCACTTTACACTTTGTGTTTAA----------CTTTCACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGAAACACGTCTGCACTCGCCG-ACGT---T-CGAT--------TC-CG-C--------TC---------CAACTATGTT--GAA-C---------CT-------GGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----A........................................................................................................................................................................................................................................................................................................................................................................................................................25203.4569069000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCA................................................................................................................................................................................................................................24201.30260150000000011
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCACT..........................................................................................26201.1022002200000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTGCACTCGCC......................................................................................25201.0020020000000000
.................................................................................................................................................................................................................................................................................................................................................TTGAA--AGAAACACGTCTGCACTCGCC......................................................................................26200.8517061100000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTGCACTCGC.......................................................................................24200.6513000000000013
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCACC..........................................................................................26200.45900900000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTGCACTCGCCG-A...................................................................................27200.45909000000000
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----AT.......................................................................................................................................................................................................................................................................................................................................................................................................................26200.30606000000000
.............................................................................................................................................................................................................................................TACACTTTGTGTTTAA----------CTTTCACTATAC................................................................................................................................................................................28200.30606000000000
..........................................................................................................................................................................................................................................................................................................................................TCGTAGCTTGAA--AGAAACACGTCTGCACT..........................................................................................29200.25500300000002
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCAAA..............................................................................................................................................................................................................................26200.25505000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGTCT...............................................................................................27200.20403100000000
...............................................................................................................................................................................................................................TGCAAACTGCACTTTACACTTTGTGTT.........................................................................................................................................................................................................27200.20404000000000
.............................................................................................................................................................................................................................................................................................................................T-------GCTATTCGTAGCTTGAA--AGAAACACG..................................................................................................27200.20404000000000
.....................................................TTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TT.............................................................................................................................................................................................................................................................................27200.20403100000000
...........................................TAA----CAATTACCAGAA--CAA-------TATG---GAA...............................................................................................................................................................................................................................................................................................................................................................................25200.20404000000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTGCACTCGCCG-....................................................................................26200.20402200000000
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----ATA......................................................................................................................................................................................................................................................................................................................................................................................................................27200.20404000000000
................................................................................................................................................................................................................................................................................TACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................25200.15303000000000
..........................................................................................................................................................................................................................................................................................................................................TCGTAGCTTGAA--AGAAACACGTCTGCAC...........................................................................................28200.15303000000000
...........................................................................................................................................................................................................................................................................................................................................CGTAGCTTGAA--AGAAACACGTCTGCAC...........................................................................................27200.15303000000000
............................................................................................................................................................................................................................................................................................TTT--TT--------------------AGAACTT-------GCTATTCGTAGCT.................................................................................................................25200.15303000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCAC...........................................................................................25200.15300300000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCAAAT.............................................................................................................................................................................................................................27200.15300300000000
............................................................................................................................................................................................................................................................................ACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................26200.15303000000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCTGC.............................................................................................27200.15301200000000
..................................................................................................................................................................................................................................................................................................T--------------------AGAACTT-------GCTATTCGTAGCTTGAA--AGA........................................................................................................28200.15301000000002
..............................................................................................................................................................................................................................................................................TATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................27200.15303000000000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAAC.......................................................................................................................................26200.15303000000000
...........................................TAA----CAATTACCAGAA--CAA-------TA.......................................................................................................................................................................................................................................................................................................................................................................................20200.15300300000000
......................................................................................................................................................................................................................................TGCACTTTACACTTTGTGTTTAA----------CT..........................................................................................................................................................................................25200.15303000000000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................27200.15300300000000
.................................................................................................................................................................................................................................................................................................................................................................TCTGCACTCGCCG-ACGT---T-CGAT--------TC-CG-.........................................................2690.11101000000000
..................................................................................................................................................................................................................TAATTGTTAGTTGTGCAAACTGCACTT......................................................................................................................................................................................................................27200.10202000000000
..................................................................................................................................................................................................................................................................................................................................................TGAA--AGAAACACGTCTGCACTCGCCG-AC..................................................................................28200.10201100000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCT...............................................................................................25200.10200200000000
........................................................................................................................................................................................................................................................................................TA-GTTT--TT--------------------AGAACTT-------GCTATTCGTA....................................................................................................................25200.10202000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACG..................................................................................................24200.10202000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCACTC.........................................................................................27200.10200100100000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCTGCA............................................................................................28200.10202000000000
...........................................TAA----CAATTACCAGAA--CAA-------TATG---GAAC------------------............................................................................................................................................................................................................................................................................................................................................................26200.10200200000000
....................................T-----ATAA----CAATTACCAGAA--CAA-------TAT......................................................................................................................................................................................................................................................................................................................................................................................23200.10200200000000
....................................................................................................................................................................................................................................................TGTGTTTAA----------CTTTCACTATACTGTTG...........................................................................................................................................................................26200.10202000000000
.................................................................................................................................................................................................................................................................................................................................................................TCTGCACTCGCCG-ACGT---T-CGAT--------TC-C...........................................................25200.10200200000000
............................................................................................................................................................................................................................................TTACACTTTGTGTTTAA----------CTTTCACTA...................................................................................................................................................................................26200.10202000000000
.TGATTCATT--------GTTCT--AAGTC-CACA-...............................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000000000
.........................................................................................................................................................................................................................................................................TTCACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................29200.10201100000000
...........................................TAA----CAATTACCAGAA--CAA-------TATG---GAAT------------------A----AT.....................................................................................................................................................................................................................................................................................................................................................29200.10200200000000
..........................................................................................................................................................................................................................................................................TCACTATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................28200.10200200000000
......CATT--------GTTCT--AAGTC-CACA-T-----A........................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000000000
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTGCACT..........................................................................................25200.10200200000000
.............................................................................................................................................................................................................................TGTGCAAACTGCACTTTACACTTTG.............................................................................................................................................................................................................25200.05101000000000
..............................................................................................................................................................................................................TCAATAATTGTTAGTTGTGCAAAC.............................................................................................................................................................................................................................24200.05101000000000
......................................................................................................................................................................................................................................TGCACTTTACACTTTGTGTTTAA----------CTT.........................................................................................................................................................................................26200.05101000000000
..................................................................................................................................................................................................................................................TTTGTGTTTAA----------CTTTCACTATACT...............................................................................................................................................................................24200.05101000000000
.............................................................................................................................................................................................................................................................................................TT--TT--------------------AGAACTT-------GCTATTCGTAGCT.................................................................................................................24200.05101000000000
............................................................................................................................................................................................................AGTCAATAATTGTTAGTTGTGCAAA..............................................................................................................................................................................................................................25200.05101000000000
..................................................................................................................................................................................................................TAATTGTTAGTTGTGCAAACTGCACT.......................................................................................................................................................................................................................26200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTGCACC..........................................................................................25200.05100100000000
................................................................................................................................................................................................................................................................................TACTGTTGTA-GTTT--TT--------------------AGAACTT-------G.............................................................................................................................24200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCACTCGC.......................................................................................29200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................TCTGCACTCGCCG-ACGT---T-CGAT--------TC-............................................................24200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTCTG..............................................................................................26200.05101000000000
...............................................................................................................................................................................................................................TGCAAACTGCACTTTACACTTTGTGT..........................................................................................................................................................................................................26200.05101000000000
......................................................................................................................................................................................................................................TGCACTTTACACTTTGTGTTTAA----------CTTT........................................................................................................................................................................................27200.05100100000000
...............................................................................................................................................................................................................................................................................ATACTGTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................23200.05101000000000
TTGATTCATT--------GTTCT--AAGTC-CACA-T-----.........................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................AA--AGAAACACGTCTGCACTCGCCG-AC..................................................................................26200.05101000000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTT.....................................................................................................................................................................................................................................19200.05100100000000
....................................................................................................................................................................................................................................................................................................................................................AA--AGAAACACGTCTGCACTCGCCG-ACG.................................................................................27200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGTC................................................................................................26200.05100000010000
...................................................................................................................................................................................................................................................................................TGTTGTA-GTTT--TT--------------------AGAACTT-------GCTATT........................................................................................................................26200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................AA--AGAAACACGTCTGCACTCGCC......................................................................................23200.05101000000000
......................................................................................................................................................................................................................................................................................TGTA-GTTT--TT--------------------AGAACTT-------GCTATTCG......................................................................................................................25200.05101000000000
......................................................TACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------TT.............................................................................................................................................................................................................................................................................26200.05100100000000
..................................................................................................................................................................................................TAATTACTATAGTCAATAATTGTTAGT......................................................................................................................................................................................................................................27200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................A--AGAAACACGTCTGCACTCGCCG-A...................................................................................24200.05101000000000
.....................................................TTACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------T..............................................................................................................................................................................................................................................................................26200.05100100000000
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----ATAA----C................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000000000
...........................................................................................................................................................................................................................................................................CACTATACTGTTGTA-GTTT--TT--------------------AGAACTT-------..............................................................................................................................28200.05101000000000
..............................................................................................................................................................................................................................................................................................T--TT--------------------AGAACTT-------GCTATTCGTAGCT.................................................................................................................23200.05100100000000
..............................................................................................................................................................................................................................................................................TATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GCT...........................................................................................................................28200.05101000000000
...............................................................................................................................................................................................................................................................................ATACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................26200.05101000000000
............................................................................................................................................................................................................AGTCAATAATTGTTAGTTGTGCAAAC.............................................................................................................................................................................................................................26200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTGCACTC.........................................................................................26200.05100100000000
............................TC-CACA-T-----ATAA----CAATTACCAGAA--CAA-------.........................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................TTGAA--AGAAACACGTCTGCA............................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................TTGAA--AGAAACACGTCTGCACTCG........................................................................................24200.05100100000000
......................................................TACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------...............................................................................................................................................................................................................................................................................24200.05101000000000
................................ACA-T-----ATAA----CAATTACCAGAA--CAA-------T........................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................TCGTAGCTTGAA--AGAAACACGTCTGC.............................................................................................26200.05100100000000
......................................................TACCAGAA--CAA-------TATG---GAAT------------------A----ATTA--------------------------------------------------------------------T..............................................................................................................................................................................................................................................................................25200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................TATTCGTAGCTTGAA--AGAAACACGTCTG..............................................................................................28200.05101000000000
.....TCATT--------GTTCT--AAGTC-CACA-T-----ATAA----CA...............................................................................................................................................................................................................................................................................................................................................................................................................26200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTGCACTCGC.......................................................................................28200.05100100000000
............................................AA----CAATTACCAGAA--CAA-------TA.......................................................................................................................................................................................................................................................................................................................................................................................19200.05100100000000
.TGATTCATT--------GTTCT--AAGTC-CACA-T-----.........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................TAGCTTGAA--AGAAACACGTCTGCA............................................................................................24200.05101000000000
..................................................................................................................................................................................................................................................................................................T--------------------AGAACTT-------GCTATTCGTAGCTTGAA--A..........................................................................................................26200.05101000000000
.................................................................................................................................................................................................................ATAATTGTTAGTTGTGCAAAC.............................................................................................................................................................................................................................21200.05101000000000
.TGATTCATT--------GTTCT--AAGTC-C...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.....................................................................................................................................................................................................................TTGTTAGTTGTGCAAACTGCACC.......................................................................................................................................................................................................................23200.05100100000000
...........................................................................................................................................................................................................TAGTCAATAATTGTTAGTTGTGCAAACT............................................................................................................................................................................................................................28200.05100100000000
.........T--------GTTCT--AAGTC-CACA-T-----ATAA----CAATTACC.........................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
.................................................................................................................................................................................................................................................................................ACTGTTGTA-GTTT--TT--------------------AGAACTT-------GC............................................................................................................................24200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................TTGAA--AGAAACACGTCTGCAC...........................................................................................21200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................AGCTTGAA--AGAAACACGTCTGCACTCG........................................................................................27200.05100100000000
..GATTCATT--------GTTCT--AAGTC-CACA-T-----ATA......................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................TTCGTAGCTTGAA--AGAAACACGTC................................................................................................24200.05101000000000
...................................................................................................................................................................................................................................................................................................................................................GAA--AGAAACACGTCTGCACTCGCCG-ACC.................................................................................28200.05100100000000
..........................................................................................................................................................................................................................................................................TCACTATACTGTTGTA-GTTT--TT--------------------AGA.........................................................................................................................................25200.05100000010000
....................................................................................................................................................................................................................................................................................GTTGTA-GTTT--TT--------------------AGAACT......................................................................................................................................18200.05101000000000
droEug1
TAAACTCATT--------GCAGTCGAGGTTG-AGTTAGTTAGAA-TT--------------------AGTGTTATGTTTTATATT------------------A----ATTAATTAATTAATCAATATAAACATTA-----------GCGA-TTTTCATCGCTGAAAACGTCTTTTCGCG-TTG--------------------------------------------------------------TTTT-GGTTTACGAAACCATTCACTGCACTTTTTTGGATAT--T-----------------ATTGAATACTTTATTTTTTTCCCCCGGAGCACAATAAAAATACACGTCTGCATACGGCG-ACGG---TCGCGA-------ATATTG---------ATT--G---------------------------------A-------ATSizeHit CountTotal NormTotal
No Reads
droBia1
TTGAGTGC-------GCTGATCC--ACGTT-CTTA-A-----TCAT----TTGTTTATT-GA--TAG-------TGCG---TAAA------------------G----ATTAATTAATTAATTAATTAGAACTTTAGTTTACGATTTGCTA-TTAGCATCGCGAAACGCAAAACCTCGCG-TTA-------------------------------------------------------------------A----------------------------TA-AATT-TTTCGACCGTTTTTGACTGAGTGAATA------ATTGTTTTTCCGGAGCGTTAA--GAAAACACGACTACACGCAACC-GAAC---T---------------------------------------------------GAATA---------AT-------GTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTGTTTATT--------GTT--------------------------------------------AG-------TGCG---TAAA------------------G----ATTAATTAATTAAATAATTTAAACTTTAGTTTACAATATGCGA-TTAGCATCGCGAATCGCAAA------------------------------------------------------------------------------------------------ACTACACTGTTCTA-AATT--TTCGAAAATTTACGACTGGTTGAATA------ATTGTTTTTCCGGAGCGTTAA--GAAAACACGTCTACACGCGACCGACAA---T-GAAA-------T---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTGGCGTTGAGTGCGCTGATCC--ACGTT-CTTA-C-----TCAT----TTATTGAT-------AA-------AGCG---TAAT-----------------------ATTAATTAATTAATTAATGAAAACTTTAGTTTCCGATACGCGAATTAGCATCGCGAATCGCAAAACCTCGCG-TTT-------------------------------------------------------------------A----------------------------TA-AATTTTTTCGAACGTTTTCGATTTTGTGGCTT------TTTGTTTTTCCGGAGCGTTAA--GAAAACACGTCTACAAGCGACG-GAAA--TT-GAAA-------AGTCTG-T--------TT--G----AGC---------AGGT--GTTGGTTGTAAT-------GCSizeHit CountTotal NormTotal
No Reads
droRho1
CAGACTCATT--------GTATTTGTGGTAA-AGTTAATTAGAG-TTTTA-----------------AGTGTTAAGTTTTATATT------------------A----ATTAAATGACAAATCAATATAAACATTC-----------GCGAT-T-TCATCGCTGAAAGCGTCTTTTCGCG-TTA--------------------------------------------------------------TAGTAGATTTATTAAATCGGTCACTGCACTTTTGTG-ATTT--T-----------------ATTGAATACTT-------TTTTTCCGGAGCACAAT--AAATACACGTCTGCATGCGACG-ACGG---T-TTAATTTGGAATGGCAG-T--------TC--GCAACTGT-------------------AATTCTGCGGTGCAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TTGACTCGTG--------GCTTTACTAGTTGCACT-TATTATTG-------ATTTGCCCGCAGGCATTGTATTTTGTTTGAGATTAATTGTTTTCTTCACTTTGATCTGTTAGAAAACTAGGTAATGGAGCTAATA------------TGATTTGGCATTGCTGCCAGCGTCTTTTCGCTACTA----------------------------------------------------------TTTCAGTTTTT----------ATTTCACTTAAATATCGAG---CT--A-----------------ATT---GACTC-------GCTTGGCGGAGCGATCA--AGAAACACGTCTGCACGGGGCA-AAAG---T-AGAACT-----TGA-CT---------AGTAAACTAAACT-----------AAA-C----ATGCAATGCAAC----SizeHit CountTotal NormTotal
No Reads
droKik1
TGAACAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATT-TCTGGGCGCAGTGCAGCAGCASizeHit CountTotal NormTotal
No Reads
droAna3
TGAACTCATT--------GCAGTCGAGGTTG-ATTTAGTTTGAG-TTTTA-----------------AGTGTTGTGTTTTATATT------------------AATTAATTAATTAATTAATCAATATAAACATTA-----------GCGAT-T-TCATCGCAAAAAGCGTCTTTTCGCG-TTA--------------------------------------------------------------TTGTAGATTTCTTAGAGCAGTCACTGCACTTTTATG-ATTT--T-----------------ATTGAATT------TTTTTTTTCCCGGAGCACAAT--AAAAACACGTCTGCATGCGACG-ACTGCAAT-GAAA-------TGTCCG-A--------C--------------------CTGCATGATGAGTGCAAGGAAGTAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................GCACAAT--AAAAACACGTCTGCATGCGAC......................................................................................2840.502020000
..........................................................................................................................................................................................................................................................AGATTTCTTAGAGCAGTCACTGCACT...............................................................................................................................................................................26200.459090000
................................................................................................................................................................................................................................................................................................................................................CACAAT--AAAAACACGTCTGCATGCGAC......................................................................................2740.251010000
.....TCATT--------GCAGTCGAGGTTG-ATTTAGT............................................................................................................................................................................................................................................................................................................................................................................................................................25200.204301000
......................................................................................................................................................................................................................................................................................................................................TTTCCCGGAGCACAAT--AAAAACACGT.................................................................................................2660.171100000
.........................................................................................................................................................................................................................................................................................................................................CCCGGAGCACAAT--AAAAACACGTCTGC.............................................................................................2760.171010000
................................................................................................................................................................................................................................................................................................................................................CACAAT--AAAAACACGTCTGCATGCG........................................................................................2560.171010000
.......................................................................................................................................................................................................................................................TGTAGATTTCTTAGAGCAGTCACTGCACC...............................................................................................................................................................................29200.102020000
.GAACTCATT--------GCAGTCGAGGTTG-ATT................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102200000
......................................................................................................................................................................................TA--------------------------------------------------------------TTGTAGATTTCTTAGAGCAGTCACTG...................................................................................................................................................................................28200.051100000
.........................................................................................................................TCAATATAAACATTA-----------GCGAT-T-TCA.....................................................................................................................................................................................................................................................................................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................CACGTCTGCATGCGACG-ACTGCAA.............................................................................24200.051100000
....................................................................................................................................................................AAAGCGTCTTTTCGCG-TTA--------------------------------------------------------------TTGTAGA......................................................................................................................................................................................................26200.051100000
...........................................................................................................................................................................................................................................................GATTTCTTAGAGCAGTCACTGCACTTT.............................................................................................................................................................................27200.051100000
.................................TTTAGTTTGAG-TTTTA-----------------AGTGTTGT........................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
........................................................................................................................................................................................................................................................GTAGATTTCTTAGAGCAGTCACTG...................................................................................................................................................................................24200.051100000
............................TTG-ATTTAGTTTGAG-TTTTA-----------------AGTGTTG.........................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
............................TTG-ATTTAGTTTGAG-TTTTA-----------------AGTGTTGT........................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
............................TTG-ATTTAGTTTGAG-TTTTA-----------------AGTGTT..........................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
..........................................................................................................................................................................................................................................................AGATTTCTTAGAGCAGTCACTGCACC...............................................................................................................................................................................26200.051010000
TGAACTCATT--------GCAGTCGAGGTTG-ATT................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
..........................................................................................................................................................................................................................................................................................................................................................AAACACGTCTGCATGCGACG-ACTGCAA.............................................................................27200.051100000
......................TCGAGGTTG-ATTTAGTTTGAG-TTT...................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
TGAACTCATT--------GCAGTCGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
......CATT--------GCAGTCGAGGTTG-ATTTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.............................TG-ATTTAGTTTGAG-TTTTA-----------------AGTGTTGT........................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
......................................................................................................................................................................................................................................................TTGTAGATTTCTTAGAGCAGTCACTG...................................................................................................................................................................................26200.051100000
droBip1
TAGACTTATT--------GCAATCGAGGTTG-AGTTTGTTCGAG-TTTTA-----------------AATGTTATGTTTTATATT------------------A----ATTTATTAAATAATCAATATAAACATTA-----------GCAAT-T-TCATCGCTGAAAGCGTTTTTTCGCG-TTG--------------------------------------------------------------TTGTTGATTTACGAAACCAGTCACTGCACTTTTTTG-ATAT--T-----------------ATTGAATAC-T-------TTTTCCCGGAACACAAT--AAATGCACGTCTGCATGCGACG-ACGA---T-GCGA-------TTT-CGATTTCGAT------A----------AATAATATAT------------AT-------TTSizeHit CountTotal NormTotal
No Reads
dp5
AACAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTT-CTTGGGCGCCGTACAGCTGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AACAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTT-CTTGGGCGCCGTACAGCTCCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AGCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCTTATCCTCATCACTTGC-AATCGTCT-AACTGCATTTTACACCCTGTGTTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................TCCTCATCACTTGC-AATCGTCT-AAC.............................................................................................................................................................................................................................25150.07101000
droVir3
TGAACAATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TCTAGGCGCAGTGCAGCAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGAACAATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA-TCTGGGTGCAGTGCAGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TGTGGGTGTAGTGCAGCAGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.ACAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TGTGGGTGTAGT.........2211.00101
....ATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTA-TGTGGGTGTAG..........1811.00110

Generated: 05/17/2015 at 10:15 PM