ID:

dse_447

 Coordinate:

scaffold_0:6056265-6056415 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.9 -7.5 -7.5

Flybase annnotation

exon [dsec_GLEANR_7569:2]; CDS [Dsec\GM24573-cds]; intron [Dsec\GM24573-in]

Repeatable elements

NameClassFamilyStrand
MICROPIA_I-intLTRGypsy+
mature
  1. scaffold_443:41552-41579 -
  2. scaffold_540:1768-1795 -
  3. scaffold_688:5744-5771 +
  4. scaffold_218:14673-14700 -
  5. scaffold_1378:2086-2113 +
  6. scaffold_4773:561-588 -
  7. scaffold_5109:1356-1383 -
  8. scaffold_5472:1790-1817 +
  9. scaffold_2:3657999-3658026 -
  10. scaffold_1:3886263-3886290 -
  11. scaffold_1:4589776-4589803 -
  12. dse_447  scaffold_0:6056336-6056363 -
  13. scaffold_0:11675353-11675380 -
  14. scaffold_7:983902-983929 -
  15. scaffold_6898:886-913 -
  16. scaffold_12:2122750-2122777 +
  17. scaffold_15:714920-714947 +
  18. scaffold_28:680516-680543 -
  19. scaffold_62:143111-143138 -
  20. scaffold_72:70535-70562 -
  21. scaffold_4621:406-433 +
  22. scaffold_0:7002191-7002218 +
  23. scaffold_0:9932939-9932966 +
  24. scaffold_6:3408104-3408131 +
  25. scaffold_7:2882459-2882486 +
  26. scaffold_13:1013620-1013647 +
  27. scaffold_9197:1417-1444 +
star
  1. scaffold_443:41608-41631 -
  2. scaffold_540:1824-1847 -
  3. scaffold_935:498-521 +
  4. scaffold_1378:2034-2057 +
  5. scaffold_4621:354-377 +
  6. scaffold_5472:1738-1761 +
  7. scaffold_2:3658055-3658078 -
  8. scaffold_1:3886319-3886342 -
  9. scaffold_1:4589832-4589855 -
  10. dse_447  scaffold_0:6056392-6056415 -
  11. scaffold_0:7002139-7002162 +
  12. scaffold_0:9932887-9932910 +
  13. scaffold_6:3408052-3408075 +
  14. scaffold_7:2882407-2882430 +
  15. scaffold_6898:949-972 -
  16. scaffold_13:1013568-1013591 +
  17. scaffold_12:2122698-2122721 +
  18. scaffold_15:714868-714891 +
  19. scaffold_62:143167-143190 -
  20. scaffold_9197:1365-1388 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGCTCTACATTCTCGTTTAACTCATTCGGGATTTCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGAACGATCGGTTACTCGTCAACGACTTTAGTGTATACCTGTCACCCTCTAATACTTCAGTCACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCCTACTGCTATCAA
**************************************************...((((.......((((((((((((((...(((............))).))))).))))...))))).......)))).************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V113
male body		 V115
head
...................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCACA.............................................. 26 0 20 0.40 8 8 0 0 0
......................................................................................................TAGTGTATACCTGTCACCCTCTAATACT......................................................................................................................... 28 0 20 0.35 7 5 1 1 0
......................................................................................................TAGTGTATACCTGTCACCCTCTAATAC.......................................................................................................................... 27 0 20 0.35 7 7 0 0 0
......................................................................................................TAGTGTATACCTGTCACCCTCTAA............................................................................................................................. 24 0 20 0.35 7 7 0 0 0
......................................................................................................TAGTGTATACCTGTCACCCTCTAATA........................................................................................................................... 26 0 20 0.25 5 4 1 0 0
..................................................TACGTATATCTTCATGGCAATACT................................................................................................................................................................................. 24 0 20 0.25 5 5 0 0 0
..........................................................................TGAACGATCGGTTACTCGTCAACGACTT..................................................................................................................................................... 28 0 20 0.25 5 4 1 0 0
......................................................................................................TAGTGTATACCTGTCACCCTCTA.............................................................................................................................. 23 0 20 0.25 5 0 4 0 1
...................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCA................................................ 24 0 20 0.15 3 3 0 0 0
..........................................................................TGAACGATCGGTTACTCGTCAACGAC....................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0
...................................................................................................................................................TTCTCTGAATTTCGGATCTAACTTAGTTT........................................................................... 29 1 20 0.10 2 2 0 0 0
.............TCGTTTAACTCATTCGGGATTTCTGC.................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
..........................................................................TGAACGATCGGTTACTCGTCAACGACT...................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0
....................................................................................................................................AGTCACCAAAAACGGTCCTCTGAAT.............................................................................................. 25 0 19 0.05 1 1 0 0 0
....................................................................................................................................AGTCACCAAAAACGGTCCTCTGAATTT............................................................................................ 27 0 19 0.05 1 1 0 0 0
...................................................ACGTATATCTTCATGGCAATACCTG............................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0
.........................TTCGGGATTTCTGCATCCGGCA............................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
........................................TCCGGCATTTTACGTATATCTTCA........................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
...........................................................................................................................TAATACTTCAGTCACCAAAAACGGTC...................................................................................................... 26 0 20 0.05 1 1 0 0 0
..........................................................................TGACCGATCGGTTACTCGTCAACGACT...................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0
..................................................TACGTATATCTTCATGGCAATACTTG............................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTT............................................................... 25 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................TTTCTTCATTCCTCAATAGCAC............................................... 22 0 20 0.05 1 1 0 0 0
.............................................................................................................TACCTGTCACCCTCTAATACTTCAGT.................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...................................................ACGTATATCTTCATGGCAATACTTGAA............................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................ACCTACGTGGTGTTTGTCAACGGC................. 24 0 20 0.05 1 1 0 0 0
...................................................ACGTATATCTTCATGGCAATAC.................................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0
.........................................................................................................................................................................................................................TGGTGTTTGTCAACGGCTGCCCTAC......... 25 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAAC.................... 26 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAACGGC................. 29 0 20 0.05 1 1 0 0 0
........................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGT........................................................................ 27 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................................TGTCTTTCTTCATTCCTCAATAGC................................................. 24 0 20 0.05 1 1 0 0 0
..............................................................................................................................TACTTCAGTCACCAAAAACGGTCCTC................................................................................................... 26 0 20 0.05 1 1 0 0 0
.........................................................................................TCGTCAACGACTTTAGTGTATACCTG........................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
.............................................................TCATGGCAATACTTGAACGATCGG...................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..........................................................................TGAACGATCGGTTACTCGTCAAA.......................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0
............CTCGTTTAACTCATTCGGGATTTCTGCA................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................TCTTTCTTCATTCTTCAATAGCACA.............................................. 25 1 20 0.05 1 1 0 0 0
....................................................................................................................................AGTCACCAAAAACGGTCCTCTGAA............................................................................................... 24 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCACATA............................................ 28 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................TCTTTCTTCATTCCTCAATAGCACA.............................................. 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGC................................................. 23 0 20 0.05 1 1 0 0 0
......................................................................................................TAGTGTATACCTGTCACCCTCTAATACTT........................................................................................................................ 29 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................TTCCGATCTAACTTAGTTTGGT........................................................................ 22 1 20 0.05 1 0 1 0 0
.....................CTCATTCGGGATTTCTGC.................................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 1
.................................................................................................................................................................................................................CACCTACGCGGTGTTTGTCAACGGC................. 25 1 20 0.05 1 1 0 0 0
.................................................TTAAGTATATCTTCATGGCAATACT................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
...................................................................................................................................................................................GTCTTTCTTCCTTCTTCAATAGCACA.............................................. 26 2 20 0.05 1 1 0 0 0
....................................................................AATACTTGAACGATCGGTTACT................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0
...........................................................................................................................................AAAAACGGTCCTCTGAATTTCGGATC...................................................................................... 26 0 20 0.05 1 1 0 0 0
..................................................................................................................................TCAGTCACCAAAAACGGTCCTCTG................................................................................................. 24 0 20 0.05 1 1 0 0 0
...........................................................................GAACGATCGGTTACTCGTCAACGACTT..................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
..............................................................CATGGCAATACTTGAACGATCGGTTAC.................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
............................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTGT...................................................................... 25 0 20 0.05 1 1 0 0 0
..........TTCTCGTTTAACTCATTCGGG............................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
..........................TCGGGATTTCTGCATCCGGCA............................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
............................................................................................TCAACGACTTTAGTGTATACCTGTC...................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
.............................................................TCATGGCAATACTTGAACGATCGGT..................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
............................................................................................................................................................TTTCGGATCTAACTTAGTTTG.......................................................................... 21 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................AGTTCGGTGTCTTTCTTCATTCCT........................................................ 24 1 20 0.05 1 1 0 0 0
............................................................................................................................................................TTTCGGATCTAACTTAGTTTGGT........................................................................ 23 0 20 0.05 1 0 0 0 1
.......................................................................................................AGTGTATACCTGTCACCCTCTAATACT......................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................CACCTACGTGATGTTTGTCAACGGC................. 25 1 20 0.05 1 1 0 0 0
...............................................................................................................CCTGTCACCCTCTAATACTTCAGT.................................................................................................................... 24 0 20 0.05 1 1 0 0 0
...........................................................................GAACGATCGGTTACTCGTCAACGAC....................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
..................................................TACGTATCTCTTCATGGCAATACTTG............................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

AACGAGATGTAAGAGCAAATTGAGTAAGCCCTAAAGACGTAGGCCGTAAAATGCATATAGAAGTACCGTTATGAACTTGCTAGCCAATGAGCAGTTGCTGAAATCACATATGGACAGTGGGAGATTATGAAGTCAGTGGTTTTTGCCAGGAGACTTAAAGCCTAGATTGAATCAAACCACAGAAAGAAGTAAGGAGTTATCGTGTATCAGTGGATGCACCACAAACAGTTGCCGACGGGATGACGATAGTT
*************************************************************************************************************************...((((.......((((((((((((((...(((............))).))))).))))...))))).......)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V113
male body		 V115
head
.......................................................................................TGAGCAGTTGCTGAAATCACATATG........................................................................................................................................... 25 0 20 0.65 13 13 0 0 0
...................................................................................................................................................................AGATTGAATCAAACCACAGAAAGAAG.............................................................. 26 0 20 0.45 9 7 1 1 0
..................................AGACGTAGGCCGTAAAATGCATATAG............................................................................................................................................................................................... 26 0 20 0.30 6 4 1 1 0
......................................................................................ATGAGCAGTTGCTGAAATCACATATG........................................................................................................................................... 26 0 20 0.25 5 5 0 0 0
....................................ACGTAGGCCGTAAAATGCATATAG............................................................................................................................................................................................... 24 0 20 0.20 4 3 1 0 0
...........................................................................................................................................................................................................GTATCAGTGGATGCACCACAAACAGT...................... 26 0 20 0.15 3 3 0 0 0
.............................................................................TGCTAGCCAATGAGCAGTTGC......................................................................................................................................................... 21 0 20 0.15 3 0 1 0 2
...................................................................................................................................................................AGATTGAATCAAACCACAGAAAGAAGT............................................................. 27 0 20 0.15 3 3 0 0 0
.....................................CGTAGGCCGTAAAATGCATATAG............................................................................................................................................................................................... 23 0 20 0.15 3 2 0 0 1
...................................................................................................................................................................AGATTGAATCAAACCACAGAAAGAA............................................................... 25 0 20 0.15 3 3 0 0 0
............................................................................................................................................TTTTGCCAGGAGACTTAAAGCCT........................................................................................ 23 0 20 0.15 3 3 0 0 0
..............................................................GTACCGTTATGAACTTGCTAGCCAA.................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0
..............................................................GTACCGTTATGAACTTGCTAGCCA..................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0
...................................................TGCATATAGAAGTACCGTTA.................................................................................................................................................................................... 20 0 20 0.10 2 0 2 0 0
....AGATGTAAGAGCAAATTGA.................................................................................................................................................................................................................................... 19 0 20 0.10 2 0 2 0 0
.........................................................................................AGCAGTTGCTGAAATCACATATG........................................................................................................................................... 23 0 20 0.10 2 2 0 0 0
...................................................................................................................................GTCAGTGGTTTTTGCCAGGAGACTT............................................................................................... 25 0 20 0.10 2 2 0 0 0
.................................AAGACGTAGGCCGTAAAATGCATATAG............................................................................................................................................................................................... 27 0 20 0.10 2 1 0 1 0
....................................................................................................................................................................GATTGAATCAAACCACAGAAAGAAG.............................................................. 25 0 20 0.10 2 2 0 0 0
.....................................................................................................................................CAGTGGTTTTTGCCAGGAGACTT............................................................................................... 23 0 20 0.10 2 1 0 1 0
...........................................................................................CAGTTGCTGAAATCACATATGGACAGT..................................................................................................................................... 27 0 20 0.10 2 2 0 0 0
........................................................................................................................................................................................AGAAGTAAGGAGTTATCGTGTA............................................. 22 0 20 0.10 2 0 1 1 0
.............................................................................................................................................................................................TAAGGAGTTATCGTGTATCAGTGGAT.................................... 26 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................................GCCGACGGGATGACGATAGTT 21 0 20 0.05 1 0 1 0 0
.........................................................................................................................AGATTATGAAGTCAGTGGTTTTTGCCA....................................................................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................ACTTGCTAGCCAATGAGC............................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0
...........................................................................................................ATATGGACAGTGGGAGATT............................................................................................................................. 19 0 20 0.05 1 0 1 0 0
...................................................TGCATATAGAAGTACCGTTATGAAC............................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0
...................................................TGCATATAGAAGTACCGTTAT................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
....................TGAGTAAGCCCTAAAGACGT................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
....................................ACGTAGGCCGTAAAATGCATATAGA.............................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
...................TTGAGTAAGCCCTAAAGACGT................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0
..................................................................CGTTATGAACTTGCTAGCCAATGA................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................AGATTGAATCAAACCACCGCAAGAAG.............................................................. 26 2 20 0.05 1 1 0 0 0
..............................................TAAAATGCATATAGAAGTAC......................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
.............................................................................................................................................................................AAACCACAGAAAGAAGTAAGGAGTTAT................................................... 27 0 20 0.05 1 1 0 0 0
..................................................................CGTTATGAACTTGCTAGCCAATGAGC............................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................................AGAAGTAAGGAGTTATCGTGTATC........................................... 24 0 20 0.05 1 0 0 1 0
..............................................................................................................................................................................................AAGGAGTTATCGTGTATCAGTG....................................... 22 0 20 0.05 1 0 1 0 0
............................................................................................................TATGGACAGTGGGAGATTA............................................................................................................................ 19 0 20 0.05 1 0 1 0 0
.............................................................AGTACCGTTATGAACTTGCTAGCCAAT................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
........................................................................................GAGCAGTTGCTGAAATCACATAT............................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
.........................................................................................................ACATATGGACAGTGGGAGATT............................................................................................................................. 21 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................TGATTGAATCAAACCACAGAAAGAAG.............................................................. 26 1 20 0.05 1 0 1 0 0
..................................................................................................TGAAATCACATATGGACAGTGGGAGATTA............................................................................................................................ 29 0 20 0.05 1 0 0 1 0
...............................................................................................................................................................................................AGGAGTTATCGTGTATCAGTGGAT.................................... 24 0 20 0.05 1 1 0 0 0
...................................................................................................................................................AGGAGACTTAAAGCCTAGATTGAAT............................................................................... 25 0 20 0.05 1 0 1 0 0
.............................CCTAAAGACGTAGGCCGTAAAA........................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................................GGAGTTATCGTGTATCAGTGGATGC.................................. 25 0 20 0.05 1 0 1 0 0
............................................................................................................TATGGACAGTGGGAGATTATGAAGT...................................................................................................................... 25 0 20 0.05 1 0 0 1 0
................................................................................................................................................................................................GGAGTTATCGTGTATCAGTG....................................... 20 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................................TGCCGACGGGATGACGATAGT. 21 0 20 0.05 1 0 0 1 0
.....................................................................................AATGAGCAGTTGCTGAAAT................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0
.............................CCTAAAGACGTAGGCCGTAAAATGCA.................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1
..................................................................................................................................AGTCAGTGGTTTTTGCCAGGAGACT................................................................................................ 25 0 20 0.05 1 1 0 0 0
....................TGAGTAAGCCCTAAAGACGTA.................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0
.....................................................................................................................................................................................GAAAGAAGTAAGGAGTTATCGTGTATC........................................... 27 0 20 0.05 1 0 0 1 0
............................................................................................................................................TTTTGCCAGGAGACTTAAAGCC......................................................................................... 22 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................................CCGATGGGATGACGAATGT. 19 3 20 0.05 1 0 0 1 0
.........................................................................................AGCAGTTGCTGAAATCACA............................................................................................................................................... 19 0 20 0.05 1 0 1 0 0
...................TTGAGTAAGCCCTAAAGACG.................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 1
.....................................CGTAGGCCGTAAAATGCATATTG............................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0
.....................................................................................AATGAGCAGTTGCTGAAATCACATATG........................................................................................................................................... 27 0 20 0.05 1 0 0 1 0
......................................................................................AAGAGCAGTTGCTGAAATCACATATG........................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
......................................................................................................................................................AGACTTAAAGCCTAGATTGAATCAA............................................................................ 25 0 20 0.05 1 0 1 0 0
...............................................................................CTAGCCAATGAGCAGTTGC......................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0
.....................................CGTAGGCCGTAAAATGCATATA................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................................................................................AAACAGTTGCCGACGGGATGACGATA... 26 0 20 0.05 1 1 0 0 0
............................................CGTAAAATGCATATAGAAGTACCGTT..................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0
.....................................CGTAGGCCGTAAAATGCATATAGA.............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
........................................................................................................CACATATGGACAGTGGGAGATTAT........................................................................................................................... 24 0 20 0.05 1 1 0 0 0
..CGAGATGTAAGAGCAAAT....................................................................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................AGCCTAGATTGAATCAAACCACA...................................................................... 23 0 20 0.05 1 1 0 0 0
..........................................................................ACTTGCTAGCCAATGAGCAGTTGCTGA...................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0
...GAGATGTAAGAGCAAATTGAGTAA................................................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0
.....................................................................................................................................................................................GAAAGAAGTAAGGAGTTA.................................................... 18 0 20 0.05 1 0 1 0 0
................................................................ACCGTTATGAACTTGCTGGCCAA.................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0
.........................................................................................................ACATATGGACAGTGGGAGATTATGAAG....................................................................................................................... 27 0 20 0.05 1 0 1 0 0
.......................................................................................TGAGCAGTTGCTGAAATCACATATT........................................................................................................................................... 25 1 20 0.05 1 1 0 0 0
..............................................................................................................TGGACAGTGGGAGATTATGAAGT...................................................................................................................... 23 0 20 0.05 1 1 0 0 0
......................................................................................................................................................AGACTTAAAGCCTAGATTGAATCAAA........................................................................... 26 0 20 0.05 1 0 0 1 0
.................................................................................................................ACAGTGGGAGATTATGAAGTCAGT.................................................................................................................. 24 0 20 0.05 1 0 0 1 0
............................................................AAGTACCGTTATGAACTTGCTAGC....................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
...................TTGAGTAAGCCCTAAAGACGTAGGC............................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 0 1
....................................ACGTAGGCCCTAAAATGCATATAG............................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0
.......................................................................................................TCACATATGGACAGTGGGAGATT............................................................................................................................. 23 0 20 0.05 1 0 1 0 0
..CGAGATGTAAGAGCAAATTG..................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
..............................CTAAAGACGTAGGCCGTAAAATGCATAT................................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0
...............................................................................................................GGACAGTGGGAGATTAGGAAGTCAGT.................................................................................................................. 26 1 20 0.05 1 1 0 0 0
....................................ACGTAGGCCGTAAAATGCATA.................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0
.....................................................................................................................................................................ATTGAATCAAACCACAGAAAGA................................................................ 22 0 20 0.05 1 1 0 0 0
....................................................................................................................GTGGGAGATTATGAAGTCAGTGGT............................................................................................................... 24 0 20 0.05 1 1 0 0 0
........................................AGGCCGTAAAATGCATATAG............................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
........................................................................................................CACATATGGACAGTGGGAGATTATGA......................................................................................................................... 26 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................................................AGTGGATGCACCACAAACAGTTGCCG................. 26 0 20 0.05 1 0 0 0 1
.......TGTAAGAGCAAATTGAGTAAGCCCTAA......................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
...................................................................................................................TGTGGGAGATTATGAAGTCAGTGGT............................................................................................................... 25 1 20 0.05 1 0 0 1 0
...................................................................................................................AGTGGGAGATTATGAAGTCAGTGGT............................................................................................................... 25 0 20 0.05 1 0 1 0 0
............................................................AAGTACCGTTATGAACTTGCTAG........................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................GTATCAGTGGATGCACCACAAACAG....................... 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................AGATTGAATCAAACCACAGAAAGTAG.............................................................. 26 1 20 0.05 1 0 0 1 0
.....................................................................................................................TGGGAGATTATGAAGTCAG................................................................................................................... 19 0 20 0.05 1 0 1 0 0
.......................................................................................................................................................................................................................................CCGATGAGATGACGAAAGTT 20 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_0:6056215-6056465 - dse_447 TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTCACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCCTACTGCTATCAA
droSim2 node_48775:1-235 - TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTTACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCT----------------
dm3 chrUextra:11755556-11755806 + TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTTACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCCTACTGCTATCAA
droEre2 scaffold_4895:172762-173004 + TTTCT----CTATA-TTCTCG---------TTTAACTCATTATGCATT--TCTGCATCCGGCATTTTCCGTATATCTTCATGGTAATACTTGA--ACGATCGGTTACTCTTCAAACGACTT-TAGCGTATACGTGTCACCATCTAATACTTCAGTTACCAAAAACGGTCC--TGAATTTCGGATCTAACTTGGTTTGGTGTCGTTCTTAATTTTTCAATAGCACTTAGTCACCAACAT-------GTCAACGCCTGCTCTACTGCTATCAA
droYak3 v2_chrUn_203:66499-66749 - TTTCT----CTATA-TTCTCG---------TTTAACTTATTAGGCATT--TCCGCACCCGGCATTTTTCGTAAATCTTCATGACAAGACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGCGTATACCTGTCACCCTCTAATACTTCAGTTTCCAAAAACGGTCCTTTGAATTTCTGATCTAACTTGGTTTGGTGTCTTTCTTCATTTTTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCTTACTGCTATCAA
droEug1 scf7180000409803:16684-16918 - TCA------------------------------AATTCATTTGGTATT--TTACTATCTGGCATTTTTCGAATATCATTGTGACAATATTTGA--ACAAGCGTTTATTTTTTA-GGGACTT-CAACATGTACCTATCACCATCCAAGCCTTCTGTTACTAAAAACGGTCCTCTAAATTTTTAATCTAACTTAGTTTGGTGTGGCTCTTTATTTTTTAGTAAAACGTAATCACCTACATTGTGTTTGACAACAGTTGCCTTGCTTTTATCGA
droBia1 scf7180000301511:24562-24811 + TTGCATTATCAAA-TTCTTCA---------TCAATCTCTGCCAGTAAT--TCCATATTCGG-----ACCCCAGGTGTTCATGTGGATACTTAT--ATTGACGCTTACTTGTTA-GCGACTT-CAACATATATCGGTCACCCCCTAAAACTTCAATTATTTCAAAGGGACCCTTAAATTTCGATTCGTGTTTTGTTTGGTTTCTCTTTTCATTTCATATTAAAACATAGTCACCAACCTGGTGCTTTACAATTTCAGCCTTTGTTTTATCGA
droTak1 scf7180000414440:25244-25497 + TTGCATTATCGAA-TTCTTCA---------TCAATCTCTGCCAGTACT--TCTATATGCGGCAAGGACCGCAGGTGTTCATGTGCATACTTAT--ATTGGCGCTTACTTATTA-GAGACTT-CAACTTATATCGGTC-CCCTCTAAAACTTCAATTATTTCAAAAGGAACCTTAAATTTCGGATCGAGTTTTGTTTGGTTTCTCTCTTTATTTCTTATTAAAACATAGTCACCAACCTGGTGCTTTACAATTTTAGACTTTGTTTTATCGA
droEle1 scf7180000490706:6271-6525 + TCGTACGATAATA-TTCTTCA---------TCTATTTCTGCAAGTATT--TGCGTATCAGGTAGAGACCGTAAATGTTCGTGTGCATATTTAT--ACTGCCGTTTACTAGTTA-ACGACTT-TAGTTTATATCTGTCTCCCTCCAAAACTTCAATAATTTCAAATGGCCCCTTATATTTTGGATCTAGCTTCGTTTGATTTCTCTCTTCATTTTTAATCAAAACATAGTCACCAACCTGGTGCTTTACAATCTTTGCTTTGTTTTTATCAA
droRho1 scf7180000776876:1186-1445 - TTTTT----AACAA-TTCTCAGGCGGGCACTCCAATTCACTCGGAACA--TAACCATCCGGCATCTTTCTCAAATCTTCATGACAATATTTAA--AAGTTCTTTTATTATGCA-ATGACTT-TAAGATATATCTATCTCCTTCTAAAACTTCACTAACCAAAAATGGTCCTTTAAACTTTGCATCCAATTTAGTTTGATGTCGTTCTTCATTTTTCAGCAAAACAAAATCTCCAATTTTATGTCGTTCAACTGCTGCTTTATTTTTATCGA
droFic1 scf7180000453555:1239-1478 - GTACT--------------------------CCAATTCACTCGGAACA--TAACCATCTGGCATCTTTCTTAAATCTTCATGACAATATTTTT--AAGTTCTCTTATTATGCA-ATGACTTTTAAAACATACCTATCTCCTGCTAGTACTTCACTAACCAAAAATGGTCCTTTAAACTTTGCATCCAACTTTGTTTGATGGCGTTCTTCGTTTTTCAGTAAAACAAAATCTCCAATTTTATGTCGTTCAACTGCTGCTTTATTTTTGTCGA
droKik1 scf7180000302660:226397-226649 - TTATA--GTCATCA-AACACA---------TTCAGCTCTTCGGGTACT--TTCCCTTCTGGTAACTTTCTTAAATCTTCATGCGCTTACTTAT--AAGTTCGTTTACTGGTTA-ATGACTT-TAAAACGTACCTATCACCCTCTAATACGTCTGTTATTTCGAAAGGCCCCTTGAATTTTGGACTCAACTTAGTTTGATGCCTGTCCTCGTTTTTTAGTAAAACAAAATCTCCAACATTGTGTCTACGTACTTTCGCCTTACTTTTATCAA
droAna3 scaffold_13260:593000-593252 + TTATA--ATCATCG-TACACA---------TTTAGCTCTTCGGGCACT--TGTCCCTCTGGTAATTTTCTTAAATCCTCATGTGCATATTTAT--AATTTCTTTTACTAGTTA-AAGACTT-TAAAATGTACCTGTCACCTTCTAGAACTTTTACTATTTCAAAAGGCCCCCTAAATTTTGGATTTAGCTTGGTCTGGTGTCTTTCTTCGCTCTTAAGTAATACGAAATCTCCAATTTTGTGCCTTTTTATTTTTGCCTTATTTCTATCAA
droBip1 scf7180000391637:2753-2988 + GT-----------------------------CCAATTCACTCGGAACA--TAATCATCTGGCATCTTTCTCAAATCTTCATGACAATATTTAT--AAGTTCTCTTATTATGCA-ATGACTT-CAGAATATATCTATCTCCTTCTAGAACTTCACTAACCAAAAATGGCCCTTTAAACTTTACATCCAATTTAGTTTGATGTCGTTCTTCATTTTTCAGTAGCACAAAATCTCCAACTTTATGTCGTTCAACTGCTGCTTTACTTTTATCGA
dp5 Unknown_group_98:21997-22247 + CACT---GTCGTT-T-----T---------TCTAATTATTCTGGTCCTTTTGCTCATCTGGTAACTTTCGCAGACTCTCGTGCGAATACTTATATACGCTCGCTTACGTATCA-ATGATTT-CCACAGGTAACGATCATCTTCAAGCAACTCTGCAATCACAAAAGGTCCTCTGAACTTGGGATTCAATTTGCTCTGATGTCATTCTTCACTTCTAAGCAAGAAATGATCCCCAACCCTGTGTTTTAAAATCTTGGCCTTAGCCTTGTAAA
droPer2 scaffold_85:231914-232164 + CACT---GTCGTT-TTTCT--------------CATTATTCTGGTCCTTTTGCTCATCTGGTAACTTTCGCAGACTCTCGTGCGAATACTTATATACGTTCGCTTACGTATCA-ATGATTT-CCACAGGTAACGATCATCTTCAAGCAACTCTGCAATCACAAAAGGTCCTCTGAACTTGGGATTCAATTTGCTCTGATGTCATTCTTCACTTCTAAGCAAGAAATGATCCCCAACCCTGTGTTTTAAAATCTTGGCCTTATCCTTGTAAA
droWil2 scf2_1100000004954:509026-509272 + TCGCT----G-----TCAATA---------TCAAACTCTTGGGGAACA--ATACCATCTGGAAGTTTTCTTATGTCTTCATGTCAATACTTAT--ATAGTCGCTTGTTGGATA-ACGACTT-TAACATATATCTATTACCATCTAGAACTTCAGCTACCAAAAATGGTCCTTTAAATTTTGGGTCTAGTTTAGTTGGGTGTCTTTCTTCGTTTTTAAGAAGGACACAATCACCAACATAGTGTCTAATAACGGTAGCCTTTGACTTGTCAA
droVir3 scaffold_13049:24492533-24492771 + TTACT--------------------------CCAATTCCTCCGGAACA--TAACCATCTGGCATCTTTCTCAAATCCTCATGGCAATATTTAT--ATGTTCTCTTATTATGCA-ATGTCTT-CAAAATGTACCTGTCGCCTTCTAACACTTCACTAATCAAAAGTGGTCCTATAAACTTTGCATCCAACTTGGACTAATGCCGCTCTTCATTTTTCAATAGATCGTAATCCCCAACTTTGTGTCTAATGACAGCCGATTTATTTTCATCGA
droMoj3 scaffold_4032:5146-5395 + GCTCT------ACTTTATACG---------TCTAGCTCATTGGGTACA--TGACCATTTGGCATTTTTCGGACATTTTCATGGCAATACTTAT--ACAGTCGATTATCTTTAA-GCGACTT-TATCATATATCTGTCACCATCCAGAACTTCTACCACCAAAAATGGCCCCCTAAATTTAGGATCTAACTTTGTTTGGTTTCTTTCTTCATTTTTAAGCAAGACGTAATCACAAATTTTGTGTCTAATGACCGCTGCCTTGCTTTTATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTCACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCCTACTGCTATCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCACA..............................................26200.4088000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATACT.........................................................................................................................28200.3575110
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATAC..........................................................................................................................27200.3577000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAA.............................................................................................................................24200.3577000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATA...........................................................................................................................26200.2554010
..................................................................TACGTATATCTTCATGGCAATACT.....................................................................................................................................................................................24200.2555000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................28200.2554010
..........................................................................................................................TAGTGTATACCTGTCACCCTCTA..............................................................................................................................23200.2550041
.......................................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCA................................................24200.1533000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................26200.1533000
..................TCG---------TTTAACTCATTCGGGATT--TCTGC........................................................................................................................................................................................................................26200.1022000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................27200.1022000
........................................................................................................................................................AGTCACCAAAAACGGTCCTCTGAAT..............................................................................................25190.0511000
........................................................................................................................................................AGTCACCAAAAACGGTCCTCTGAATTT............................................................................................27190.0511000
.......................................TTCGGGATT--TCTGCATCCGGCA................................................................................................................................................................................................................22200.0511000
........................................................TCCGGCATTTTACGTATATCTTCA...............................................................................................................................................................................................24200.0511000
...............................................................................................................................................TAATACTTCAGTCACCAAAAACGGTC......................................................................................................26200.0511000
..................................................................TACGTATATCTTCATGGCAATACTTG...................................................................................................................................................................................26200.0511000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTT...............................................................25200.0511000
..........................................................................................................................................................................................................TTTCTTCATTCCTCAATAGCAC...............................................22200.0511000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGT....................................................................................................................26200.0511000
...................................................................ACGTATATCTTCATGGCAATACTTGA--A...............................................................................................................................................................................27200.0511000
......................................................................................................................................................................................................................................ACCTACGTGGTGTTTGTCAACGGC.................24200.0511000
...................................................................ACGTATATCTTCATGGCAATAC......................................................................................................................................................................................22200.0510100
.............................................................................................................................................................................................................................................TGGTGTTTGTCAACGGCTGCCCTAC.........25200.0511000
.................................................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAAC....................26200.0511000
.................................................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAACGGC.................29200.0511000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGT........................................................................27200.0510010
......................................................................................................................................................................................................TGTCTTTCTTCATTCCTCAATAGC.................................................24200.0511000
..................................................................................................................................................TACTTCAGTCACCAAAAACGGTCCTC...................................................................................................26200.0511000
...........................................................................................................TCGTCA-ACGACTT-TAGTGTATACCTG........................................................................................................................................26200.0511000
.............................................................................TCATGGCAATACTTGA--ACGATCGG........................................................................................................................................................................24200.0511000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-AA...........................................................................................................................................................23200.0511000
.................CTCG---------TTTAACTCATTCGGGATT--TCTGCA.......................................................................................................................................................................................................................28200.0511000
........................................................................................................................................................AGTCACCAAAAACGGTCCTCTGAA...............................................................................................24200.0511000
.......................................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGCACATA............................................28200.0511000
........................................................................................................................................................................................................TCTTTCTTCATTCCTCAATAGCACA..............................................25200.0511000
.......................................................................................................................................................................................................GTCTTTCTTCATTCCTCAATAGC.................................................23200.0511000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATACTT........................................................................................................................29200.0511000
...................................CTCATTCGGGATT--TCTGC........................................................................................................................................................................................................................18200.0510001
....................................................................................AATACTTGA--ACGATCGGTTACT...................................................................................................................................................................22200.0510100
...............................................................................................................................................................AAAAACGGTCCTCTGAATTTCGGATC......................................................................................26200.0511000
......................................................................................................................................................TCAGTCACCAAAAACGGTCCTCTG.................................................................................................24200.0511000
...........................................................................................GA--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................27200.0511000
..............................................................................CATGGCAATACTTGA--ACGATCGGTTAC....................................................................................................................................................................27200.0511000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTGT......................................................................25200.0511000
...............TTCTCG---------TTTAACTCATTCGGG..................................................................................................................................................................................................................................21200.0511000
........................................TCGGGATT--TCTGCATCCGGCA................................................................................................................................................................................................................21200.0511000
..............................................................................................................TCA-ACGACTT-TAGTGTATACCTGTC......................................................................................................................................25200.0511000
.............................................................................TCATGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................25200.0511000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTG..........................................................................21200.0511000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGT........................................................................23200.0510001
...........................................................................................................................AGTGTATACCTGTCACCCTCTAATACT.........................................................................................................................27200.0511000
...................................................................................................................................CCTGTCACCCTCTAATACTTCAGT....................................................................................................................24200.0511000
...........................................................................................GA--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................25200.0511000
droSim2
TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTTACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCT----------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGA........................................................................................281398.003980000002196679330010000
..................................................................TACGTATATCTTCATGGCAATACT.....................................................................................................................................................................................241374.003740000220035116419401110000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................281305.0030500100012814131310000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGATC......................................................................................301175.0017500000012940600000000
..................TCG---------TTTAACTCATTCGGGATT--TCTGC........................................................................................................................................................................................................................261166.00166000100561951275070000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................261140.001400041002611483350120000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGT....................................................................................................................261131.0013100100049144993060000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................271122.00122007100221250281010000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGT...............................................................................................................................................27186.00860000004043750000000
.................................................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAACGGC.................29381.332440013001192177210110000
..................................................................TACGTATATCTTCATGGCA..........................................................................................................................................................................................19173.00730000502001100001000
..............................................................................................................................................................CAAAAACGGTCCTCTGAATTTCGGA........................................................................................25171.00710000004312880000000
..............................................................................................................................................................CAAAAACGGTCCTCTGAATTTCGGATC......................................................................................27166.006600100032146130000000
..................................................................TACGTATATCTTCATGGCAATAC......................................................................................................................................................................................23162.0062000060000000002000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGAT.......................................................................................29159.005900000024201050000000
................................................................................TGGCAATACTTGA--ACGATCGGTTACT...................................................................................................................................................................26158.005800000010131794032000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................28157.005700000016812192000000
..................................................................TACGTATATCTTCATGGC...........................................................................................................................................................................................18150.0050000050000000000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGG.........................................................................................27146.004600000014612110021000
..................................................................TACGTATATCTTCATGGCAATACTT....................................................................................................................................................................................25141.0041000030000000038000
..........................................................................................................................................................................TCTGAATTTCGGATCTAACTTAGTT............................................................................25140.0040010100602650001000
..................................................................TACGTATATCTTCATGGCAATA.......................................................................................................................................................................................22137.0037000030000000007000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTT............................................................................................24134.00340113000621020000000
........................................................................................................................................................AGTTACCAAAAACGGTCCTCTGAAT..............................................................................................25132.0032000011062940000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGAA.......................................................................................29131.0031000000174730000000
..............................TTTAACTCATTCGGGATT--TCTGCATC.....................................................................................................................................................................................................................26130.0030000000125450031000
............................................................................TTCATGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................26130.0030000000037610103000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGA...............................................................................................................................................27130.00300000000160140000000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTGTC.....................................................................26130.00300020001221301000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTC.......................................................................................................................23129.0029000080101600004000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGTAA.............................................................................................................................................29129.0029000000214400000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGT.............................................................................22129.00290000001301510000000
................................TAACTCATTCGGGATT--TCTGCATC.....................................................................................................................................................................................................................24128.002800118020925000000
...............................TTAACTCATTCGGGATT--TCTGCATC.....................................................................................................................................................................................................................25127.002700020093912001000
..................TCG---------TTTAACTCATTCGGGATT--TCTGCA.......................................................................................................................................................................................................................27127.002700000091451061000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATAC..........................................................................................................................27124.0024000216031001010000
................................................................................TGGCAATACTTGA--ACGATCGGTTAC....................................................................................................................................................................25122.002200000014621062000
........................................................................................................................................................AGTTACCAAAAACGGTCCTCTGAATT.............................................................................................26122.0022001000601050000000
...................................................................................................................................................................................................................................GTCACCTACGTGGTGTTTGTCAACGGC.................27322.006600000038121240000000
....................................................................................................CGGTTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................27121.0021000000911000010000
...............................................................................................................................................................AAAAACGGTCCTCTGAATTTCGGATC......................................................................................26120.0020000000112520000000
.................................................................................................................................................................................TTCGGATCTAACTTAGTTTGGTGTC.....................................................................25119.0019002000611000000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATT.............................................................................................23117.001700200081420000000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................25117.001700200072510000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGA.........................................................................................................................................................25117.001700000051241040000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTA..............................................................................................................................23116.0016000016000000000000
.....................................................................................................................................................................................................................................CACCTACGTGGTGTTTGTCAACGGC.................25316.004800000023101140000000
.....................................................................................................................................TGTCACCCTCTAATACTTCAGTTACCAAA.............................................................................................................29116.001600000062620000000
.............................................................................................................................................................CCAAAAACGGTCCTCTGAATTTCGGATC......................................................................................28116.001600000093400000000
.................................................................................................................................TACCTGTCACCCTCTAATAC..........................................................................................................................20116.0016000016000000000000
..................TCG---------TTTAACTCATTCGGGATT--TCTGCAT......................................................................................................................................................................................................................28115.001500000000560022000
..............................................................................CATGGCAATACTTGA--ACGATCGGTTAC....................................................................................................................................................................27115.001500000043430001000
................................TAACTCATTCGGGATT--TCTGCATCCGG..................................................................................................................................................................................................................27114.001400010060610000000
................................................................................TGGCAATACTTGA--ACGATCGGTTA.....................................................................................................................................................................24114.001400000025340000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTG................................................................................................................................................26113.001300000090400000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................21113.0013000011000100010000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGT...............................................................................................................................................22113.0013000001001110000000
..................................................................TACGTATATCTTCATGGCAAT........................................................................................................................................................................................21113.0013000010000000003000
.....................................................................................................GGTTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................26113.0013000000201010000000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTT...............................................................25113.001300000030811000000
...............................................................................ATGGCAATACTTGA--ACGATCGGTTACT...................................................................................................................................................................27112.001200200016111000000
........................................................TCCGGCATTTTACGTATATCTTCATGGC...........................................................................................................................................................................................28112.001200000023410020000
...................................................................................................TCGGTTACTCGTCA-ACGAC........................................................................................................................................................19112.0012010001100000000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTC...........................................................................................25112.001200000040340001000
..................................................................................................................................................TACTTCAGTTACCAAAAACG.........................................................................................................20212.00240000121200000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACG..........................................................................................................................................................24111.001100000020110034000
................................TAACTCATTCGGGATT--TCTGCATCCGGC.................................................................................................................................................................................................................28111.001100000052220000000
................................................................................................CGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................23111.0011000001100000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-AC...........................................................................................................................................................23111.0011000010000000010000
...............................................................................................................................................................................ATTTCGGATCTAACTTAG..............................................................................18111.0011000011000000000000
....................................................................................................................................................................................................................................TCACCTACGTGGTGTTTGTCAACGGC.................26311.00330000001171140000000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................24110.001000010030141000000
..........................................................................................................................TAGTGTATACCTGTCACCC..................................................................................................................................19110.001000009000001000000
.................................................................................................................................TACCTGTCACCCTCTAATACTT........................................................................................................................22110.001000008020000000000
.............................................................CATTTTACGTATATCTTCATG.............................................................................................................................................................................................21110.0010000010000000000000
......................................................................................TACTTGA--ACGATCGGTTACTC..................................................................................................................................................................21110.0010000010000000000000
...............................TTAACTCATTCGGGATT--TCTGCATCCGGC.................................................................................................................................................................................................................29110.001000000033040000000
..................................................................TACGTATATCTTCATGGCAA.........................................................................................................................................................................................20110.0010000010000000000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAG.....................................................................................................................25110.001000000031210012000
............................................................................................................................................................ACCAAAAACGGTCCTCTGAATTTCGGA........................................................................................27110.001000000050230000000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAA.............................................................................................................................2419.00900018000000000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTT............................................................................2319.00900000051012000000
..............................................................................CATGGCAATACTTGA--ACGATCGGTTA.....................................................................................................................................................................2619.00900000001320030000
..............................................................................................................................................................................................TAGTTTGGTGTCTTTCTTC..............................................................1919.00900000900000000000
..................TCG---------TTTAACTCATTCGGGATT--TCTG.........................................................................................................................................................................................................................2518.00800000021320000000
................................TAACTCATTCGGGATT--TCTGCA.......................................................................................................................................................................................................................2218.00800000800000000000
..................................................................TACGTATATCTTCATGGCAATACTTGA--A...............................................................................................................................................................................2818.00800010010310002000
......................................................................................TACTTGA--ACGATCGGTTACTCGTC...............................................................................................................................................................2418.00800100000610000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGT.................................................................................................................................................2518.00800000031120001000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTTCA.............................................................2718.00800000020420000000
................................TAACTCATTCGGGATT--TCT..........................................................................................................................................................................................................................1918.00800000800000000000
....................................................................................AATACTTGA--ACGATCGGTTACTCGTC...............................................................................................................................................................2618.00800000001043000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAAT..............................................................................................2218.00800000012320000000
..........................................................................................................................TAGTGTATACCTGTCACCCTC................................................................................................................................2118.00800008000000000000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATACT.........................................................................................................................2817.00700010020400000000
............................................................................TTCATGGCAATACTTGA--ACGATCGG........................................................................................................................................................................2517.00700000010100014000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTTCAT............................................................2817.00700000000700000000
..............................................................................................................................................................CAAAAACGGTCCTCTGAATTTCGGAT.......................................................................................2617.00700000041200000000
...............................TTAACTCATTCGGGATT--TCTGCATCCGG..................................................................................................................................................................................................................2817.00700000040120000000
................................................................................TGGCAATACTTGA--ACGATCGGTTACTC..................................................................................................................................................................2717.00700000000420010000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTGT......................................................................2517.00700000010510000000
.................................................................................................................................................................................TTCGGATCTAACTTAGTTTGGTGT......................................................................2417.00700000030220000000
........................................................TCCGGCATTTTACGTATATCTTCATGG............................................................................................................................................................................................2717.00700000021100003000
.....................................................................................................................................TGTCACCCTCTAATACTTCAGTTACCAAAA............................................................................................................3017.00700000012400000000
....................................................................................................................................................................................................GGTGTCTTTCTTCATTCCTCAATA...................................................2436.3319000016000000003000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGG.........................................................................2616.00600000030300000000
....................G---------TTTAACTCATTCGGGATT--TCTGCATC.....................................................................................................................................................................................................................2716.00600000000111030000
..................................................................TACGTATATCTTCATGGCAATACTTG...................................................................................................................................................................................2616.00600000000000060000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................2616.00600000010211010000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCT................................................................2416.00600000010410000000
........................................................TCCGGCATTTTACGTATATCTTCA...............................................................................................................................................................................................2416.00600000000010014000
..........................................................CGGCATTTTACGTATATCTTCATGGCAA.........................................................................................................................................................................................2816.00600000000140010000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................2316.00600000030210000000
...............................................................................................................................................TAATACTTCAGTTACCAAAAA...........................................................................................................2126.0012000012000000000000
................................................................................................................................................................AAAACGGTCCTCTGAATTTCGGATC......................................................................................2515.00500000023000000000
............................................................................TTCATGGCAATACTTGA--ACGATCGGTT......................................................................................................................................................................2715.00500000011300000000
..............................TTTAACTCATTCGGGATT--TCTGCATCCGGC.................................................................................................................................................................................................................3015.00500000041000000000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTGTCT....................................................................2715.00500000000401000000
.....................................................................................................................................TGTCACCCTCTAATACTTCAGTTACCAAAAA...........................................................................................................3115.00500000020300000000
..........................................................................................................................................................................TCTGAATTTCGGATCTAACTTAGT.............................................................................2415.00500000020300000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAG..................................................................................................................................................2415.00500000000010013000
...............................................................................ATGGCAATACTTGA--ACGATCGGTTA.....................................................................................................................................................................2515.00500000030020000000
......................................................................................................................................................TCAGTTACCAAAAACGGTCCTCTGAAT..............................................................................................2715.00500000010400000000
................................................................................TGGCAATACTTGA--ACGATCGG........................................................................................................................................................................2115.00500000000010004000
................................TAACTCATTCGGGATT--TCTGCAT......................................................................................................................................................................................................................2315.00500000002210000000
...............................TTAACTCATTCGGGATT--TCTGCAT......................................................................................................................................................................................................................2415.00500000030110000000
...............................................................................................................................................................AAAAACGGTCCTCTGAATTTCGGAT.......................................................................................2515.00500000040100000000
..............................................................................CATGGCAATACTTGA--ACGATCGGTTACT...................................................................................................................................................................2815.00500000013100000000
...........................................................................................GA--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................2615.00500000011210000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAAA..............................................................................................2215.00500000031100000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGTG.......................................................................2815.00500000020300000000
.................................................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTCAAC....................2634.3313000010000300000000
.......................................................................................................................................................................................TCTAACTTAGTTTGGTGTCTTTCTTC..............................................................2614.00400000020020000000
..................................................................................................................................................................................TCGGATCTAACTTAGTTTGGTGTCTT...................................................................2614.00400000010300000000
......................................................................................TACTTGA--ACGATCGGTTACTCGTCA-AC...........................................................................................................................................................2714.00400000000102010000
................................................................................................................................................................................................................................ATAGTCACCTACGTGGTGTTTGTCAACGGC.................3034.001200000080400000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACTT-T....................................................................................................................................................2914.00400000030100000000
................................................................................TGGCAATACTTGA--ACGATCGGTTACTCG.................................................................................................................................................................2814.00400010001200000000
................................................................................................................................................................................TTTCGGATCTAACTTAGTTTGGTG.......................................................................2414.00400000010210000000
...............................................................................ATGGCAATACTTGA--ACGATCGGTTAC....................................................................................................................................................................2614.00400000000110002000
.......................................................................................................................................................................TCCTCTGAATTTCGGATCTAACTTAGT.............................................................................2714.00400000001210000000
..........................................................................................................................................................TTACCAAAAACGGTCCTCTGAATTT............................................................................................2514.00400000001030000000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAATA...........................................................................................................................2614.00400010010020000000
................................................................................TGGCAATACTTGA--ACGATCGGTTACTCGTC...............................................................................................................................................................3014.00400000021100000000
................................................................................TGGCAATACTTGA--ACGATCGGTTACTCGT................................................................................................................................................................2914.00400000001120000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAA...............................................................................................2114.00400000020200000000
......................................................................................................................................................TCAGTTACCAAAAACGGTCCTCTGA................................................................................................2514.00400000000310000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGTGTC.....................................................................3014.00400000030100000000
.......................................................................................................TTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................2414.00400000010200010000
........................................................................................................................................................AGTTACCAAAAACGGTCCTCTGAA...............................................................................................2414.00400000020010001000
...........................................................................................GA--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................2714.00400000020200000000
..................................................................................................................................................................AACGGTCCTCTGAATTTCGGATC......................................................................................2314.00400000020200000000
......................................................................................TACTTGA--ACGATCGGTTACTCGTCA-.............................................................................................................................................................2514.00400000001020010000
.............................................................................................................................TGTATACCTGTCACCCTCTAATACT.........................................................................................................................2514.00400000010300000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCG..........................................................................................2614.00400000012100000000
..................TCG---------TTTAACTCATTCGGGATT--TCT..........................................................................................................................................................................................................................2414.00400000000220000000
..................................................TCTGCATCCGGCATTTTACGTATA.....................................................................................................................................................................................................2414.00400000012010000000
.................................AACTCATTCGGGATT--TCTGCATCCGGC.................................................................................................................................................................................................................2714.00400000010210000000
.................................................................................................................................................................................................................................TAGTCACCTACGTGGTGTTTGTC.......................2333.3310000010000000000000
..........TACA-TTCTCG---------TTTAACTCATTCGGGA.................................................................................................................................................................................................................................2643.251300000046300000000
..........................................................................................................................TAGTGTATACCTGTCACCCTCTAAT............................................................................................................................2513.00300000000101010000
...............................................................................................................................................TAATACTTCAGTTACCAAAAACGGTCCTC...................................................................................................2913.00300000020010000000
........................................................TCCGGCATTTTACGTATATCTTCATGGCAA.........................................................................................................................................................................................3013.00300000000300000000
...............................................................................................................................................................AAAAACGGTCCTCTGAATTTCGGA........................................................................................2413.00300000030000000000
..................TCG---------TTTAACTCATTCGGGATT--TCTGCATC.....................................................................................................................................................................................................................2913.00300000002000001000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTAA...........................................................................2413.00300000000000030000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTATACC..........................................................................................................................................2713.00300000010200000000
.................................................................................................................................................................................TTCGGATCTAACTTAGTTTGGTGTCT....................................................................2613.00300000010101000000
..................................................................................................ATCGGTTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................2913.00300000010200000000
..................................................................................................................................................................................TCGGATCTAACTTAGTTTGGTGTCT....................................................................2513.00300000010200000000
....................................................................................................................................................................................................GGTGTCTTTCTTCATTCC.........................................................1833.00900009000000000000
.......................................................................................................................TT-TAGTGTATACCTGTCACCCTCTAA.............................................................................................................................2613.00300000012000000000
..............................TTTAACTCATTCGGGATT--TCTGCATCCGG..................................................................................................................................................................................................................2913.00300000001020000000
.....................................................................................................................................................TTCAGTTACCAAAAACGGTCCTCTGAA...............................................................................................2713.00300000010200000000
......................................................................................................................................................TCAGTTACCAAAAACGGTCCTCTGAA...............................................................................................2613.00300000010110000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TA...................................................................................................................................................2313.00300000001110000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGT........................................................................2713.00300000020001000000
.............................................................................TCATGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................2513.00300000011000010000
..........................................................................................................................................................................TCTGAATTTCGGATCTAACTTAG..............................................................................2313.00300000000000003000
.........................................................................................TTGA--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................2713.00300000020010000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-T....................................................................................................................................................2213.00300000001000002000
.......................................................................................................................TT-TAGTGTATACCTGTCACCCTCTAATA...........................................................................................................................2813.00300000000300000000
....................................................................................................................................................................................................GGTGTCTTTCTTCATTCCTCAAT....................................................2333.00900008000000001000
.......................................................................................................................................................................TCCTCTGAATTTCGGATCTAACTTAGTT............................................................................2813.00300000010200000000
.......................................................................................................TTACTCGTCA-ACGACTT-TAGTGA...............................................................................................................................................2313.00300000001020000000
..............................................................................CATGGCAATACTTGA--ACGATCGGTT......................................................................................................................................................................2513.00300000020000010000
.........................................................................................TTGA--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................2813.00300000021000000000
..........................................................................................................................................................TTACCAAAAACGGTCCTCTGAATT.............................................................................................2413.00300000012000000000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTATA............................................................................................................................................2513.00300000000100002000
..............................TTTAACTCATTCGGGATT--TCTGCAT......................................................................................................................................................................................................................2513.00300000010100010000
.....................................................................................................................................................TTCAGTTACCAAAAACGGTCCTCTGA................................................................................................2613.00300000030000000000
........................................................................................................................................CACCCTCTAATACTTCAGTTACCAAAAA...........................................................................................................2813.00300000021000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-A............................................................................................................................................................2213.00300000000000021000
........................................................................................................................................................AGTTACCAAAAACGGTCCTCTGAATTT............................................................................................2713.00300010000100010000
......................................................................................................................................................................................................TGTCTTTCTTCATTCCTCAATAGCACA..............................................2733.00900000800001000000
................................TAACTCATTCGGGATT--TCTGCATCCGGCAT...............................................................................................................................................................................................................3013.00300000011100000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGAAA......................................................................................3013.00300000030000000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTAA..........................................................................................2613.00300000001200000000
............................................................................................................................................................ACCAAAAACGGTCCTCTGAATTTCGGATC......................................................................................2913.00300000020010000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGTTA..................................................................................................................2813.00300000000300000000
..........................................................................................TGA--ACGATCGGTTACT...................................................................................................................................................................1613.00300000000003000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGATA......................................................................................3013.00300000021000000000
..........TACA-TTCTCG---------TTTAACTCA........................................................................................................................................................................................................................................1942.7511000011000000000000
......................................................................................................................................................................................................TGTCTTTCTTCATTCCTCAA.....................................................2032.67800000800000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACA..........................................................................................................................................................2412.00200000000000020000
.................CTCG---------TTTAACTCATTCGGGATT--TCTGC........................................................................................................................................................................................................................2712.00200000000110000000
............................................................................................................................................................................TGAATTTCGGATCTAACT.................................................................................1812.00200000001001000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGA.................................................................................................................................................2512.00200000000200000000
.................................AACTCATTCGGGATT--TCTGCATCCGGCA................................................................................................................................................................................................................2812.00200020000000000000
.......................................................................................................................................................CAGTTACCAAAAACGGTCCTCTGAATA.............................................................................................2712.00200000000100010000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGT.........................................................................................2712.00200000010010000000
........................................................................TATCTTCATGGCAATACTTGA--ACGA............................................................................................................................................................................2512.00200000001010000000
........................................................................................................................................................AGTTACCAAAAACGGTCCTCTGA................................................................................................2312.00200000001100000000
....................................TCATTCGGGATT--TCTGCATCCGGC.................................................................................................................................................................................................................2412.00200000000200000000
.............................................................................................................................................................CCAAAAACGGTCCTCTGAATTTCGGAA.......................................................................................2712.00200000010010000000
..............................................................................................................................................................CAAAAACGGTCCTCTGAATTTCGG.........................................................................................2412.00200000011000000000
..................................................................TACGTATATCTTCATGGCAATACTTGA--................................................................................................................................................................................2712.00200000000020000000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTATAC...........................................................................................................................................2612.00200000011000000000
...............................................................................................................................................................................ATTTCGGATCTAACTTAGTTTGGTGTC.....................................................................2712.00200000000200000000
..................................................................................................................................................................AACGGTCCTCTGAATTTCGGAT.......................................................................................2212.00200000020000000000
...............................TTAACTCATTCGGGATT--TCTGCATCCG...................................................................................................................................................................................................................2712.00200000001010000000
.................................AACTCATTCGGGATT--TCTGCATCCGGCAT...............................................................................................................................................................................................................2912.00200000010100000000
.............................................................................................................................................................CCAAAAACGGTCCTCTGAATT.............................................................................................2112.00200200000000000000
..........................................................CGGCATTTTACGTATATCTTCATGGC...........................................................................................................................................................................................2612.00200000000010001000
.......................................TTCGGGATT--TCTGCATCCGGCATT..............................................................................................................................................................................................................2412.00200000000100010000
.................................................................................GGCAATACTTGA--ACGATCGGTTACTC..................................................................................................................................................................2612.00200000001000001000
....................................................................................................................................................................CGGTCCTCTGAATTTCGGATC......................................................................................2112.00200000020000000000
....................................................................................................CGGTTACTCGTCA-ACGACTT-TAGTGTAA.............................................................................................................................................2812.00200000000110000000
..................TCG---------TTTAACTCATTCGGGATT--TCTGCAA......................................................................................................................................................................................................................2812.00200000000000020000
...............................................................................................ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................2312.00200000011000000000
..............................................................................CATGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................2412.00200000001100000000
..................................................................................................ATCGGTTACTCGTCA-ACGACTT-TAGT.................................................................................................................................................2612.00200000001100000000
.........................................................................................................................................................................CTCTGAATTTCGGATCTAACTTAGTT............................................................................2612.00200000010001000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGA................................................................................................2012.00200000011000000000
.........................................CGGGATT--TCTGCATC.....................................................................................................................................................................................................................1512.00200000000002000000
................................................................................................................................................................................TTTCGGATCTAACTTAGT.............................................................................1812.00200000010100000000
......................................................................................TACTTGA--ACGATCGGTTACT...................................................................................................................................................................2012.00200100000100000000
.......................................................................................................TTACTCGTCA-ACGACTT-TAGTGTATACCA.........................................................................................................................................2912.00200000000200000000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTTGGTGT......................................................................2912.00200000020000000000
..........................................................................................................................................................TTACCAAAAACGGTCCTCTGAATTTCGGA........................................................................................2912.00200000000110000000
.......................................................................................................................................................................TCCTCTGAATTTCGGATCTAACTT................................................................................2412.00200000000101000000
..............................................................................................................................................................CAAAAACGGTCCTCTGAATTTCGGAA.......................................................................................2612.00200000020000000000
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTATACCTG........................................................................................................................................2912.00200000020000000000
.......................................................................................................TTACTCGTCA-ACGACTT-TAGTGT...............................................................................................................................................2312.00200000000200000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGTT...................................................................................................................2712.00200000000000020000
.................................................................................................GATCGGTTACTCGTCA-ACGACTT-TAGT.................................................................................................................................................2712.00200000000110000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACA.......................................................................................................................................................2712.00200000010000010000
..................................................................................................................................................................................TCGGATCTAACTTAGTTTGGTGTC.....................................................................2412.00200000011000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACC.......................................................................................................................................................2712.00200100000010000000
.......................................................................................................................................................CAGTTACCAAAAACGGTCCTCTGAA...............................................................................................2512.00200000000110000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTCGGAAT......................................................................................3012.00200000011000000000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGACTT-T....................................................................................................................................................2712.00200000000010010000
............................................................................................................................................................................TGAATTTCGGATCTAACTTAGTTT...........................................................................2412.00200000000001010000
.......................................................................................................................................................................TCCTCTGAATTTCGGATCTAACTTT...............................................................................2512.00200000020000000000
.................................................................................GGCAATACTTGA--ACGATCGGTTACT...................................................................................................................................................................2512.00200000011000000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGTATA............................................................................................................................................3012.00200000010100000000
................................TAACTCATTCGGGATT--TCTGCATCCG...................................................................................................................................................................................................................2612.00200000011000000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGC...............................................................................................................................................2712.00200000000200000000
.................................................................TTACGTATATCTTCATGGCAATA.......................................................................................................................................................................................2312.00200000000000011000
..................................................TCTGCATCCGGCATTTTACGTATATCTT.................................................................................................................................................................................................2812.00200000000000020000
................................................................................TGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................2212.00200000001000001000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGTAT.............................................................................................................................................2912.00200000000200000000
................................TAACTCATTCGGGATT--TCTGCATCC....................................................................................................................................................................................................................2512.00200000010001000000
dm3
TTGCT----CTACA-TTCTCG---------TTTAACTCATTCGGGATT--TCTGCATCCGGCATTTTACGTATATCTTCATGGCAATACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGTGTATACCTGTCACCCTCTAATACTTCAGTTACCAAAAACGGTCCTCTGAATTTCGGATCTAACTTAGTTTGGTGTCTTTCTTCATTCCTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCCTACTGCTATCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
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..........................................................................................TGA--ACGATCGGTTACTCGTCA-.............................................................................................................................................................21201.15230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000233000000100000000000000000000003000000000000000010000000000000000000000000000500000200000000000000010
...............................................................................................................CA-ACGACTT-TAGTGTATACCT.........................................................................................................................................21201.15230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000134000000000000000000000000000001000010010000000010000000000000000010000000000800000000000000000000010
..............................................................................CATGGCAATACTTGA--ACGATCGGTTACT...................................................................................................................................................................28201.152300000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000201011140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................ATTTCGGATCTAACTTAGTTTGGTGTC.....................................................................27201.15230000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000001000000000001000200000000000002010000000000000000000000000000000000000000000000000000000000001000001100000000302000000000000000021000010
..............................................................................................................................................................................................TAGTTTGGTGTCTTTCTTCATTCCTC.......................................................26201.15230000000110000000000001000000000000000010000000001000000000000000000000000000000000001070000000002100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000030002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATGGCAATACTTGA--ACGATCGGT.......................................................................................................................................................................23201.15230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000600000100000000010003010034000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000
..................................................TCTGCATCCGGCATTTTACGTATATCT..................................................................................................................................................................................................27191.11210000000000000000000000000000010000000000100000000000000000110000000000000000000000000010000000000000000000000000000000000000000000000000000000000110000001400000000000000000000010000000000000100000000000100000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000010000000
.............................................................................................................................................................................................TTAGTTTGGTGTCTTTCTTCA.............................................................21201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000002000000010000000000000000001000000000000000000000000001100000010000000000000000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGAC........................................................................................................................................................24201.10220000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000611000300000000000000000000000000000000000000000000000001000000000000400001000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000
...................CG---------TTTAACTCATTCGGGATT--T............................................................................................................................................................................................................................21201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000100080000000000000000000000200000100000010000000000000000000000000000000000000000600000000000000000000010
........................................................................................................TACTCGTCA-ACGACTT-TAGTGTATAC...........................................................................................................................................26201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000002000000010000000000000000000000000000000000000000000001000700000000000000002101103000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................TACGTGGTGTTTGTCAACGGCT................22201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000010000000000000000003200000000000000000000000000000000000000000000000000000000000000010001100101000001000000000000000000000000000000000000000000000000000000000100000000100500000000000000000000000
................................................................................................................................................................................................................................................TGTTTGTCAACGGCTGCCCTACTG.......24201.10220000000000000000000000000000000000000100100000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000011000000000000000000000000000024000222000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................TTACGTATATCTTCATGGCAATA.......................................................................................................................................................................................23201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000200000000000000000000000000000000100000021000000000000000000000000010013000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................ATATCTTCATGGCAATACTTG...................................................................................................................................................................................21201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000241000000000000000000000000001000000100000000000000000000000000000000000000001100000000000000000000000
.....................................................................................................GGTTACTCGTCA-ACGACTT-TAGTGTA..............................................................................................................................................26201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000021207620000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGTGT...............................................................................................................................................27201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000001000000000000000000000002000300000000000000020018110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TAATACTTCAGTTACCAAAAACGGT.......................................................................................................25201.10220000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100210000000000000000000000000000000000000101100030100000003000000000100100101010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................TCTGCATCCGGCATTTTACGTATA.....................................................................................................................................................................................................24191.05200000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000001000070000001020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000020000000
....................................................................................................................................................CTTCAGTTACCAAAAACGGT.......................................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001900000010000000000000000
...........................................................................................................................................................TACCAAAAACGGTCCTCTGAATTTC...........................................................................................25201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000100000000000000030215050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTTGGTGTCTTTCTTCATTCCTCAATA...................................................27201.05210000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000107820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCTTCATTCCTCAATAGCACATAGT..........................................25201.05210000000000000000000000000000000000000100000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100101000000200000000000000000000000000000000000000000000000001000100000000100200001000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000203000000
...............................................................................................................................................................................................................TCATTCCTCAATAGCACATAGTCACC......................................26201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000407090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................T-TAGTGTATACCTGTCACCCT.................................................................................................................................21201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000001000000000000000000000000000100001211020000000000000000000000010000001000010000000000000000000000000000000000000100000000020000000000000040
..............................................................................................................TCA-ACGACTT-TAGTGTATACCTGTCACCC..................................................................................................................................29201.05210000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000010036710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCATTCCTCAATAGCACATAG...........................................21201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000000000020000000000000001000000000000000010000000000001300000000000000000000010
.......................................................................................................TTACTCGTCA-ACGACTT-TAGTGTATACC..........................................................................................................................................28201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100100000000000000106640000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
TTTCT----CTATA-TTCTCG---------TTTAACTCATTATGCATT--TCTGCATCCGGCATTTTCCGTATATCTTCATGGTAATACTTGA--ACGATCGGTTACTCTTCAAACGACTT-TAGCGTATACGTGTCACCATCTAATACTTCAGTTACCAAAAACGGTCC--TGAATTTCGGATCTAACTTGGTTTGGTGTCGTTCTTAATTTTTCAATAGCACTTAGTCACCAACAT-------GTCAACGCCTGCTCTACTGCTATCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTTCT----CTATA-TTCTCG---------TTTAACTTATTAGGCATT--TCCGCACCCGGCATTTTTCGTAAATCTTCATGACAAGACTTGA--ACGATCGGTTACTCGTCA-ACGACTT-TAGCGTATACCTGTCACCCTCTAATACTTCAGTTTCCAAAAACGGTCCTTTGAATTTCTGATCTAACTTGGTTTGGTGTCTTTCTTCATTTTTCAATAGCACATAGTCACCTACGTGGTGTTTGTCAACGGCTGCCTTACTGCTATCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................TCATGACAAGACTTGA--ACGATCGGTT......................................................................................................................................................................2624.50900000000009
........................................................................................................TACTCGTCA-ACGACTT-TAGCGTATACC..........................................................................................................................................2772.2916010600000000
..............................................................................................................TCA-ACGACTT-TAGCGTATACCTGTCACCC..................................................................................................................................2961.831102900000000
...................................................................................................TCGGTTACTCGTCA-ACGACTT-TAGCG................................................................................................................................................26101.7017000000000017
..............................................................................................................TCA-ACGACTT-TAGCGTATACCTGTCACC...................................................................................................................................2871.14802600000000
..........................................................................................................................................................................................................TTTCTTCATTTTTCAATAGCACATAGTC.........................................2871.14807000010000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGTT...................................................................................................................2771.00706100000000
................................................................................................................A-ACGACTT-TAGCGTATACCTGTCACCC..................................................................................................................................2761.00601500000000
..........................................................................................................................................................................................................TTTCTTCATTTTTCAATAGCACATAGT..........................................2770.86606000000000
.........................................................................................................ACTCGTCA-ACGACTT-TAGCGTATACC..........................................................................................................................................2670.71505000000000
..............................................................................................................................................................................................................TTCATTTTTCAATAGCACATAGTCACC......................................2780.50403100000000
.............................................................................TCATGACAAGACTTGA--ACGATCGGT.......................................................................................................................................................................2520.50101000000000
...........................................................................................................TCGTCA-ACGACTT-TAGCGTATACCTGT.......................................................................................................................................2770.43303000000000
........................................................................................................................................................................................................TCTTTCTTCATTTTTCAATAGCACA..............................................2570.43303000000000
..........................................................................................................................................................................................................TTTCTTCATTTTTCAATAGCACATAG...........................................2670.43303000000000
.....................................................................................................................................TGTCACCCTCTAATACTTCAGTTTC.................................................................................................................2530.33101000000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGTTT..................................................................................................................2830.33101000000000
.........................................................................................................ACTCGTCA-ACGACTT-TAGCGTATA............................................................................................................................................2470.29201100000000
..........................................................................................................CTCGTCA-ACGACTT-TAGCGTATACC..........................................................................................................................................2570.29201100000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAGT....................................................................................................................2670.29202000000000
............................................................................................................CGTCA-ACGACTT-TAGCGTATACCTGT.......................................................................................................................................2670.29202000000000
..................................................................................................................................................................................................................................................TTTGTCAACGGCTGCCTTACTGCTA....2580.25202000000000
...............................................................................................................................TATACCTGTCACCCTCTAATACTTCAGT....................................................................................................................2840.25101000000000
..........................................................................................................................TAGCGTATACCTGTCACCCTCTAATAC..........................................................................................................................2740.25101000000000
...........................................................................................................................................................................................................TTCTTCATTTTTCAATAGCACATAGTC.........................................2780.25202000000000
.........................................................................................................................................................................................................................................TACGTGGTGTTTGTCAACGGCTGCC.............2540.25100100000000
...............................................................................................................................TATACCTGTCACCCTCTAATACTTCAGTT...................................................................................................................2940.25101000000000
........................................................................................................................T-TAGCGTATACCTGTCACCCTCTAATAC..........................................................................................................................2840.25101000000000
.....................................................................................................................................................................................................................TTCAATAGCACATAGTCACCTACGTGG...............................2790.22201010000000
.......................................................................................................................TT-TAGCGTATACCTGTCACCCTCTAAT............................................................................................................................2750.20101000000000
....................................................................................................................................................................................................................................................TGTCAACGGCTGCCTTACTGCTATCA.2660.17101000000000
.......................................................................................................................TT-TAGCGTATACCTGTCACCCTC................................................................................................................................2360.17100100000000
.......................................................................................................................TT-TAGCGTATACCTGTCACCC..................................................................................................................................2160.17100100000000
..........................................................................................................................TAGCGTATACCTGTCACCCTCTAA.............................................................................................................................2460.17100000010000
..........................................................................................................CTCGTCA-ACGACTT-TAGCGTATACCTG........................................................................................................................................2770.14101000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACA.......................................................................................................................................................2770.14101000000000
...........................................................................................................TCGTCA-ACGACTT-TAGCGTATACCTG........................................................................................................................................2670.14101000000000
.........................................................................................................................................................................................................CTTTCTTCATTTTTCAATAGCACA..............................................2470.14101000000000
...........................................................................................................TCGTCA-ACGACTT-TAGCGTATACCTGTC......................................................................................................................................2870.14101000000000
........................................................................................................TACTCGTCA-ACGACTT-TAGCGTATAC...........................................................................................................................................2670.14100100000000
........................................................................................................................................................................................................TCTTTCTTCATTTTTCAATAGCACATA............................................2770.14101000000000
................................................................................................................A-ACGACTT-TAGCGTATACCTGTCACC...................................................................................................................................2670.14101000000000
..............................................................................................................TCA-ACGACTT-TAGCGTATACCT.........................................................................................................................................2270.14100001000000
..............................................................................................................TCA-ACGACTT-TAGCGTATACCTGTC......................................................................................................................................2570.14101000000000
........................................................................................................................................................................................................TCTTTCTTCATTTTTCAATAGCA................................................2370.14101000000000
.................................................................................................................................TACCTGTCACCCTCTAATACTTCAG.....................................................................................................................2570.14100100000000
......................................................................................................................................................................................................TGTCTTTCTTCATTTTTCAATAGCAC...............................................2670.14101000000000
......................................................................................................................................................................................................TGTCTTTCTTCATTTTTCAATAGCACA..............................................2770.14101000000000
...............................................................................................................CA-ACGACTT-TAGCGTATACCTGTCA.....................................................................................................................................2570.14101000000000
..........................................................................................TGA--ACGATCGGTTACTCGTCA-ACGACTT-.....................................................................................................................................................2870.14101000000000
..........................................................................................................CTCGTCA-ACGACTT-TAGCGTATACCTGT.......................................................................................................................................2870.14101000000000
........................................................................................................TACTCGTCA-ACGACTT-TAGCGTATACCTG........................................................................................................................................2970.14101000000000
...........................................................................................................................................................................................................TTCTTCATTTTTCAATAGCACATAG...........................................2580.13101000000000
............................................................................................................................................................................................................TCTTCATTTTTCAATAGCACATAGTCACC......................................2980.13101000000000
...............................................................................................................................................................................................................TCATTTTTCAATAGCACATAGTCACC......................................2680.13100000010000
...........................................................................................................................................................................................................TTCTTCATTTTTCAATAGCACATAGT..........................................2680.13101000000000
................................................................................................................................................................................................................CATTTTTCAATAGCACATAGTCACC......................................2580.13100100000000
...................................................................................................................................................................................................................TTTTCAATAGCACATAGTCACCTACG..................................2690.11100100000000
............................................................................................A--ACGATCGGTTACTCGTCA-ACGACT.......................................................................................................................................................2590.11100100000000
..................................................................................................................................................................................................................TTTTTCAATAGCACATAGTCACCTACG..................................2790.11101000000000
...............................................................................................ACGATCGGTTACTCGTCA-ACGACTT-T....................................................................................................................................................2690.11101000000000
...................................................................................................................................................................................................................TTTTCAATAGCACATAGTCACCTAC...................................2590.11101000000000
...................................................................................................................................................................................................................TTTTCAATAGCACATAGTC.........................................1990.11101000000000
droEug1
TCA------------------------------AATTCATTTGGTATT--TTACTATCTGGCATTTTTCGAATATCATTGTGACAATATTTGA--ACAAGCGTTTATTTTTTA-GGGACTT-CAACATGTACCTATCACCATCCAAGCCTTCTGTTACTAAAAACGGTCCTCTAAATTTTTAATCTAACTTAGTTTGGTGTGGCTCTTTATTTTTTAGTAAAACGTAATCACCTACATTGTGTTTGACAACAGTTGCCTTGCTTTTATCGASizeHit CountTotal NormTotal
No Reads
droBia1
TTGCATTATCAAA-TTCTTCA---------TCAATCTCTGCCAGTAAT--TCCATATTCGG-----ACCCCAGGTGTTCATGTGGATACTTAT--ATTGACGCTTACTTGTTA-GCGACTT-CAACATATATCGGTCACCCCCTAAAACTTCAATTATTTCAAAGGGACCCTTAAATTTCGATTCGTGTTTTGTTTGGTTTCTCTTTTCATTTCATATTAAAACATAGTCACCAACCTGGTGCTTTACAATTTCAGCCTTTGTTTTATCGASizeHit CountTotal NormTotal
No Reads
droTak1
TTGCATTATCGAA-TTCTTCA---------TCAATCTCTGCCAGTACT--TCTATATGCGGCAAGGACCGCAGGTGTTCATGTGCATACTTAT--ATTGGCGCTTACTTATTA-GAGACTT-CAACTTATATCGGTC-CCCTCTAAAACTTCAATTATTTCAAAAGGAACCTTAAATTTCGGATCGAGTTTTGTTTGGTTTCTCTCTTTATTTCTTATTAAAACATAGTCACCAACCTGGTGCTTTACAATTTTAGACTTTGTTTTATCGASizeHit CountTotal NormTotal
No Reads
droEle1
TCGTACGATAATA-TTCTTCA---------TCTATTTCTGCAAGTATT--TGCGTATCAGGTAGAGACCGTAAATGTTCGTGTGCATATTTAT--ACTGCCGTTTACTAGTTA-ACGACTT-TAGTTTATATCTGTCTCCCTCCAAAACTTCAATAATTTCAAATGGCCCCTTATATTTTGGATCTAGCTTCGTTTGATTTCTCTCTTCATTTTTAATCAAAACATAGTCACCAACCTGGTGCTTTACAATCTTTGCTTTGTTTTTATCAASizeHit CountTotal NormTotal
No Reads
droRho1
TTTTT----AACAA-TTCTCAGGCGGGCACTCCAATTCACTCGGAACA--TAACCATCCGGCATCTTTCTCAAATCTTCATGACAATATTTAA--AAGTTCTTTTATTATGCA-ATGACTT-TAAGATATATCTATCTCCTTCTAAAACTTCACTAACCAAAAATGGTCCTTTAAACTTTGCATCCAATTTAGTTTGATGTCGTTCTTCATTTTTCAGCAAAACAAAATCTCCAATTTTATGTCGTTCAACTGCTGCTTTATTTTTATCGASizeHit CountTotal NormTotal
No Reads
droFic1
GTACT--------------------------CCAATTCACTCGGAACA--TAACCATCTGGCATCTTTCTTAAATCTTCATGACAATATTTTT--AAGTTCTCTTATTATGCA-ATGACTTTTAAAACATACCTATCTCCTGCTAGTACTTCACTAACCAAAAATGGTCCTTTAAACTTTGCATCCAACTTTGTTTGATGGCGTTCTTCGTTTTTCAGTAAAACAAAATCTCCAATTTTATGTCGTTCAACTGCTGCTTTATTTTTGTCGASizeHit CountTotal NormTotal
No Reads
droKik1
TTATA--GTCATCA-AACACA---------TTCAGCTCTTCGGGTACT--TTCCCTTCTGGTAACTTTCTTAAATCTTCATGCGCTTACTTAT--AAGTTCGTTTACTGGTTA-ATGACTT-TAAAACGTACCTATCACCCTCTAATACGTCTGTTATTTCGAAAGGCCCCTTGAATTTTGGACTCAACTTAGTTTGATGCCTGTCCTCGTTTTTTAGTAAAACAAAATCTCCAACATTGTGTCTACGTACTTTCGCCTTACTTTTATCAASizeHit CountTotal NormTotal
No Reads
droAna3
TTATA--ATCATCG-TACACA---------TTTAGCTCTTCGGGCACT--TGTCCCTCTGGTAATTTTCTTAAATCCTCATGTGCATATTTAT--AATTTCTTTTACTAGTTA-AAGACTT-TAAAATGTACCTGTCACCTTCTAGAACTTTTACTATTTCAAAAGGCCCCCTAAATTTTGGATTTAGCTTGGTCTGGTGTCTTTCTTCGCTCTTAAGTAATACGAAATCTCCAATTTTGTGCCTTTTTATTTTTGCCTTATTTCTATCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................TAGCTCTTCGGGCACT--TGTCCCTCTGG..................................................................................................................................................................................................................2712.002200000
...............................................................................................................TA-AAGACTT-TAAAATGTACCTGTCACC...................................................................................................................................27171.59272250000
........................................................................................................TACTAGTTA-AAGACTT-TAAAATGTACC..........................................................................................................................................27161.00164120000
........TCATCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................26160.7512912000
..........................................................................................................................TAAAATGTACCTGTCACCTTCTAGAACT.........................................................................................................................28190.326150000
.......................................................................................................TTACTAGTTA-AAGACTT-TAAAATGTACC..........................................................................................................................................28160.315140000
..................................................................................................................AAGACTT-TAAAATGTACCTGTCACC...................................................................................................................................25170.295230000
....A--ATCATCG-TACACA---------TTTAGCTCTTCGG....................................................................................................................................................................................................................................27160.254220000
...TA--ATCATCG-TACACA---------TTTAGCTCTTCGG....................................................................................................................................................................................................................................28160.254310000
.TATA--ATCATCG-TACACA---------TTTAGCTCT........................................................................................................................................................................................................................................26160.193110010
.TATA--ATCATCG-TACACA---------TTTAGCTC.........................................................................................................................................................................................................................................25160.193030000
......................................................................................................................................................................................................................TAAGTAATACGAAATCTCCAATTTTG...............................26170.183030000
.......................................................................................................................TT-TAAAATGTACCTGTCACCTTCTAG.............................................................................................................................26190.163120000
...........................................................................................................................AAAATGTACCTGTCACCTTCTAGAACT.........................................................................................................................27190.163120000
..........................................................................................................................TAAAATGTACCTGTCACCTTCTAGAAC..........................................................................................................................27190.163300000
.....................................................................TTAAATCCTCATGTGCATATTTAT--AATT............................................................................................................................................................................28150.132020000
.........................................................................................................................................................................................TAGCTTGGTCTGGTGTCTTTCTTCGC............................................................26150.132200000
........TCATCG-TACACA---------TTTAGCTCTTCGG....................................................................................................................................................................................................................................25160.132200000
....A--ATCATCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................28160.132110000
.................................................................................................................................TACCTGTCACCTTCTAGAACTTTTAC....................................................................................................................26160.132110000
...TA--ATCATCG-TACACA---------TTTAGCTCT........................................................................................................................................................................................................................................24160.132110000
.......ATCATCG-TACACA---------TTTAGCTCTTCGGGC..................................................................................................................................................................................................................................2880.131100000
...TA--ATCATCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................29160.132200000
........TCATCG-TACACA---------TTTAGCTCTTCG.....................................................................................................................................................................................................................................24160.132200000
........................................................................................................................................................................................TTAGCTTGGTCTGGTGTCTTTCTTCG.............................................................26160.132110000
...TA--ATCATCG-TACACA---------TTTAGCTCTTCG.....................................................................................................................................................................................................................................27160.132010010
.........CATCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................25160.132200000
...............................................................................................................TA-AAGACTT-TAAAATGTACCTGTCACCT..................................................................................................................................28170.122020000
................................................................................................................A-AAGACTT-TAAAATGTACCTGTCACC...................................................................................................................................26170.122110000
...............TACACA---------TTTAGCTCTTCGGGCA.................................................................................................................................................................................................................................22110.091100000
......................................................CCTCTGGTAATTTTCTTAAATCCTCA...............................................................................................................................................................................................26130.081100000
...............................................................................................................................................TAGAACTTTTACTATTTCAAAAGGCCCC....................................................................................................28140.071010000
.........................................................................................................................................................................................TAGCTTGGTCTGGTGTCTTTCTTCGCT...........................................................27150.071100000
........................................................TCTGGTAATTTTCTTAAATCCTCATGT............................................................................................................................................................................................27150.071100000
......................................................................................................................................................................................................................................TCCAATTTTGTGCCTTTTTATTTTTGCCT............29150.071010000
......................................................................................................................................................................................................................................TCCAATTTTGTGCCTTTTTATTTTTGCC.............28150.071010000
.................................................................................................................................................................................................................................................GCCTTTTTATTTTTGCCTTATTTCC.....25150.071010000
.............................................................TAATTTTCTTAAATCCTCATGTGC..........................................................................................................................................................................................24160.061010000
...............................................................................................................................................................................................................TCGCTCTTAAGTAATACGAAATCTCCAA....................................28160.061100000
.................................................................................................................................TACCTGTCACCTTCTAGAACTTTTACTAC.................................................................................................................29160.061010000
TTATA--ATCATCG-TACACA---------TTTAGC...........................................................................................................................................................................................................................................24160.061010000
....A--ATCATCG-TACACA---------TTTAGCTCTTCG.....................................................................................................................................................................................................................................26160.061100000
.....................................................................................................................................TGTCACCTTCTAGAACTTTTACTATTTC..............................................................................................................28160.061010000
...........................................................................................................................................................................................................................AATACGAAATCTCCAATTTTGTGCCT..........................26160.061010000
........................................................................................................................................................................................TTAGCTTGGTCTGGTGTCTTT..................................................................21160.061100000
.........................................................................................................................................................................................TAGCTTGGTCTGGTGTCTTTCTTCG.............................................................25160.061100000
.....................................................................................................................................TGTCACCTTCTAGAACTTTTACTATT................................................................................................................26160.061010000
...TA--ATCATCG-TACACA---------TTTAGCTCTT.......................................................................................................................................................................................................................................25160.061100000
.........................................................................................................................................................................................TAGCTTGGTCTGGTGTCTTTCC................................................................22160.061010000
.............................................................TAATTTTCTTAAATCCTCATGTGCA.........................................................................................................................................................................................25160.061100000
..........................................................................TCCTCATGTGCATATTTAT--AATTTCT.........................................................................................................................................................................26160.061010000
.............................................................................................................................................................................................................................TACGAAATCTCCAATTTTGTGCCTTTT.......................27160.061010000
.......ATCATCG-TACACA---------TTTAGCTCTTCGG....................................................................................................................................................................................................................................26160.061010000
...TA--ATCATCG-TACACA---------TTTAGCTCTTC......................................................................................................................................................................................................................................26160.061100000
........................................................................................................................................CACCTTCTAGAACTTTTACTATTTC..............................................................................................................25160.061010000
..........................................................................................................CTAGTTA-AAGACTT-TAAAATGTACC..........................................................................................................................................25160.061010000
.TATA--ATCATCG-TACACA---------TTTAGCTCC........................................................................................................................................................................................................................................26160.061010000
..............................................................................................................................................................................................................TTCGCTCTTAAGTAATACGAAATCTCCAA....................................29160.061100000
.......ATCATCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................27160.061100000
........................................................................................................................................................................................TTAGCTTGGTCTGGTGTCTTTCTTC..............................................................25160.061100000
................................................................TTTTCTTAAATCCTCATGTGCATATT.....................................................................................................................................................................................26160.061100000
...............................................................................................................................TGTACCTGTCACCTTCTAGAACTTT.......................................................................................................................25160.061100000
...............................................................................................................................TGTACCTGTCACCTTCTAGAACTTTTA.....................................................................................................................27160.061100000
TTATA--ATCATCG-TACACA---------TTTAGCTCT........................................................................................................................................................................................................................................27160.061100000
..........................................................................................................................................................................................AGCTTGGTCTGGTGTCTTTCA................................................................21170.061100000
.............................................................................................................................................................................................TTGGTCTGGTGTCTTTCTTCGCTC..........................................................24170.061010000
...........................................................................................................TAGTTA-AAGACTT-TAAAATGTACCTG........................................................................................................................................26170.061010000
.............................................................................................................................................................................................TTGGTCTGGTGTCTTTCTTCGCT...........................................................23170.061100000
...........................................................................................................TAGTTA-AAGACTT-TAAAATGTACCTGT.......................................................................................................................................27170.061100000
.............................................................................................................................................................................................TTGGTCTGGTGTCTTTCTTCGCTCT.........................................................25170.061100000
.......................................................................................................................................................................................................................AAGTAATACGAAATCTCCAATTTTG...............................25170.061100000
...........................................................................................................TAGTTA-AAGACTT-TAAAATGTACCTGTC......................................................................................................................................28170.061100000
....................................................................................................................................................................................................GGTGTCTTTCTTCGCTCTTAAGTAATACG..............................................29170.061100000
................................................................................................................A-AAGACTT-TAAAATGTACCTGTCACCC..................................................................................................................................27170.061010000
..............................................................................................................................................................................................TGGTCTGGTGTCTTTCTTCGCTCTTAAG.....................................................28170.061100000
...............................................................................................................................................................................................GGTCTGGTGTCTTTCTTCGCTCTT........................................................24170.061100000
.............................................................................................................................................................................................TTGGTCTGGTGTCTTTCTTCGC............................................................22170.061100000
............................................................................................................AGTTA-AAGACTT-TAAAATGTACCTGT.......................................................................................................................................26170.061100000
....................................................................................................................GACTT-TAAAATGTACCTGTCACCTTC................................................................................................................................26170.061100000
.......................................................................................................................................................................................................GTCTTTCTTCGCTCTTAAGTAATACGAA............................................28180.061100000
.................................................................................................................................................................................................TCTGGTGTCTTTCTTCGCTCTTAAGTAA..................................................28180.061100000
.................................................................................................................................................................................................TCTGGTGTCTTTCTTCGCTCTTAAGTA...................................................27180.061100000
...........TCG-TACACA---------TTTAGCTCTTCGGG...................................................................................................................................................................................................................................23180.061100000
........................................................................................................................................................................................................TCTTTCTTCGCTCTTAAGTAATACG..............................................25180.061100000
.............................................................................................................................................................................................TTGGTCTGGTGTCTTTCTTCG.............................................................21180.061100000
................................................................................................................................................................................................GTCTGGTGTCTTTCTTCGCTC..........................................................21180.061100000
.......................................................................................................................TT-TAAAATGTACCTGTCACCTTCTAGA............................................................................................................................27190.051010000
..........................................................................................................................TAAAATGTACCTGTCACC...................................................................................................................................18190.051010000
............................................................................................................................AAATGTACCTGTCACCTTCTAGAACTT........................................................................................................................27190.051010000
..........................................................................................................................TAAAATGTACCTGTCACCTTCTAGA............................................................................................................................25190.051100000
.............................................................................................................................AATGTACCTGTCACCTTCTAGAAC..........................................................................................................................24190.051100000
............................................................................................................................AAATGTACCTGTCACCTTCTAGAACT.........................................................................................................................26190.051010000
..........................................................................................................................TAAAATGTACCTGTCACCTTCTAGAACC.........................................................................................................................28190.051010000
.......................................................................................................................TT-TAAAATGTACCTGTCACCTTCTAGAAC..........................................................................................................................29190.051100000
.......................................................................................................................TT-TAAAATGTACCTGTCACC...................................................................................................................................20190.051010000
........................................................................................................................T-TAAAATGTACCTGTCACCTTCTAGAA...........................................................................................................................27190.051010000
droBip1
GT-----------------------------CCAATTCACTCGGAACA--TAATCATCTGGCATCTTTCTCAAATCTTCATGACAATATTTAT--AAGTTCTCTTATTATGCA-ATGACTT-CAGAATATATCTATCTCCTTCTAGAACTTCACTAACCAAAAATGGCCCTTTAAACTTTACATCCAATTTAGTTTGATGTCGTTCTTCATTTTTCAGTAGCACAAAATCTCCAACTTTATGTCGTTCAACTGCTGCTTTACTTTTATCGASizeHit CountTotal NormTotal
No Reads
dp5
CACT---GTCGTT-T-----T---------TCTAATTATTCTGGTCCTTTTGCTCATCTGGTAACTTTCGCAGACTCTCGTGCGAATACTTATATACGCTCGCTTACGTATCA-ATGATTT-CCACAGGTAACGATCATCTTCAAGCAACTCTGCAATCACAAAAGGTCCTCTGAACTTGGGATTCAATTTGCTCTGATGTCATTCTTCACTTCTAAGCAAGAAATGATCCCCAACCCTGTGTTTTAAAATCTTGGCCTTAGCCTTGTAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CACT---GTCGTT-TTTCT--------------CATTATTCTGGTCCTTTTGCTCATCTGGTAACTTTCGCAGACTCTCGTGCGAATACTTATATACGTTCGCTTACGTATCA-ATGATTT-CCACAGGTAACGATCATCTTCAAGCAACTCTGCAATCACAAAAGGTCCTCTGAACTTGGGATTCAATTTGCTCTGATGTCATTCTTCACTTCTAAGCAAGAAATGATCCCCAACCCTGTGTTTTAAAATCTTGGCCTTATCCTTGTAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TCGCT----G-----TCAATA---------TCAAACTCTTGGGGAACA--ATACCATCTGGAAGTTTTCTTATGTCTTCATGTCAATACTTAT--ATAGTCGCTTGTTGGATA-ACGACTT-TAACATATATCTATTACCATCTAGAACTTCAGCTACCAAAAATGGTCCTTTAAATTTTGGGTCTAGTTTAGTTGGGTGTCTTTCTTCGTTTTTAAGAAGGACACAATCACCAACATAGTGTCTAATAACGGTAGCCTTTGACTTGTCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................TAT--ATAGTCGCTTGTTGGATA-ACGA.........................................................................................................................................................2559.0045050400
..........................................................................................TAT--ATAGTCGCTTGTTGGATA-ACGACT.......................................................................................................................................................2758.6043035080
............................................................................................T--ATAGTCGCTTGTTGGATA-ACGACT.......................................................................................................................................................2554.4022119020
...................TA---------TCAAACTCTTGGGGAACA--ATACCATC.....................................................................................................................................................................................................................2833.3310010000
............................................................................................................................................................................TAAATTTTGGGTCTAGTTTAGTT............................................................................2332.00601050
....T----G-----TCAATA---------TCAAACTCTTGGGGAACA--AT...........................................................................................................................................................................................................................2871.8613013000
...............TCAATA---------TCAAACTCTTGGGGAACA--AT...........................................................................................................................................................................................................................2671.7112010110
...................TA---------TCAAACTCTTGGGGAACA--ATACCAT......................................................................................................................................................................................................................2731.67505000
...............................................................................................................................TATATCTATTACCATCTAGAACTTCAGC....................................................................................................................2881.5012010020
..............................TCAAACTCTTGGGGAACA--ATACCATC.....................................................................................................................................................................................................................2631.33404000
....T----G-----TCAATA---------TCAAACTCTTGGGGAACA--A............................................................................................................................................................................................................................2771.29908010
.....................................................................................................................................................................................................................TTAAGAAGGACACAATCACCAACATAG...............................2741.25504010
.........................................................................................TTAT--ATAGTCGCTTGTTGGATA-ACGA.........................................................................................................................................................2651.20600060
...................TA---------TCAAACTCTTGGGGAACA--ATACCA.......................................................................................................................................................................................................................2631.00301020
............................................................................................T--ATAGTCGCTTGTTGGATA-ACGA.........................................................................................................................................................2351.00501040
..........................................................................................TAT--ATAGTCGCTTGTTGGATA-ACGAC........................................................................................................................................................2651.00503020
TCGCT----G-----TCAATA---------TCAAACTCTTGGGG...................................................................................................................................................................................................................................2651.00504010
......................................................................................................................................................................................................................TAAGAAGGACACAATCACCAACATAG...............................2641.00403010
TCGCT----G-----TCAATA---------TCAAACTCTTGGG....................................................................................................................................................................................................................................2550.80404000
...................................................................................CAATACTTAT--ATAGTCGCTTGTTGGA................................................................................................................................................................2650.80402020
...................................................TACCATCTGGAAGTTTTCTTATGTCT..................................................................................................................................................................................................2640.75300030
...................................................................................................................................................................................................................TTTTAAGAAGGACACAATCACCAACA..................................2640.75303000
....T----G-----TCAATA---------TCAAACTCTTGGGGAACA--.............................................................................................................................................................................................................................2670.71504010
.............................................................................................................................................................................AAATTTTGGGTCTAGTTTAGTT............................................................................2230.67201010
...........................................................................................................................................................................TTAAATTTTGGGTCTAGTTTAGTT............................................................................2430.67200020
.......................................TGGGGAACA--ATACCATCTGGAAGTTT............................................................................................................................................................................................................2630.67202000
...........................................................................................AT--ATAGTCGCTTGTTGGATA-ACGACT.......................................................................................................................................................2650.60303000
......................................................................................TACTTAT--ATAGTCGCTTGTTGGATA-ACG..........................................................................................................................................................2850.60302010
...............................................................................................ATAGTCGCTTGTTGGATA-ACGACT.......................................................................................................................................................2450.60303000
...........................................................................................................................................................TACCAAAAATGGTCCTTTAAATTTTG..........................................................................................2640.50202000
....................................................................................................................................................................................................................................................TAATAACGGTAGCCTTTGACTTGTCAA2740.50200020
......................................................................................................................................................................................................................TAAGAAGGACACAATCACCAACATAGT..............................2740.50202000
....................................................................................................................................................................................................................................TCACCAACATAGTGTCTAATAACGGTA................2740.50200020
....................................................................................................................................................................................................................................TCACCAACATAGTGTCTAATAACGG..................2540.50202000
.....................................................................................................................................................................................................................TTAAGAAGGACACAATCACCAACATA................................2640.50201010
....................................................................................................................................................................................................................................................TAATAACGGTAGCCTTTGACTTGTCA.2640.50200020
................................................................................................................................................................................................................................................TGTCTAATAACGGTAGCCTTTGACT......2570.43303000
.CGCT----G-----TCAATA---------TCAAACTCTTGGGG...................................................................................................................................................................................................................................2550.40202000
......................................................................................TACTTAT--ATAGTCGCTTGTTGGATA-A............................................................................................................................................................2650.40202000
...................................................................................CAATACTTAT--ATAGTCGCTTGTTGG.................................................................................................................................................................2550.40201010
TCGCT----G-----TCAATA---------TCAAACTCTTGGGGA..................................................................................................................................................................................................................................2750.40202000
...........................................................................................AT--ATAGTCGCTTGTTGGATA-ACGA.........................................................................................................................................................2450.40202000
........................................................................................................................T-TAACATATATCTATTACCATCTAGAAC..........................................................................................................................2880.38303000
.......................................TGGGGAACA--ATACCATCTGGAAGTT.............................................................................................................................................................................................................2530.33101000
...................TA---------TCAAACTCTTGGGGAACA--ATACC........................................................................................................................................................................................................................2530.33101000
..........................................................................................................................................................................TTTAAATTTTGGGTCTAGTTTAGTT............................................................................2530.33101000
.........G-----TCAATA---------TCAAACTCTTGGGGAACA--AT...........................................................................................................................................................................................................................2770.29202000
...............TCAATA---------TCAAACTCTTGGGGAACA--A............................................................................................................................................................................................................................2570.29201010
.....................................................................................................................................................TTCAGCTACCAAAAATGGTCCTT...................................................................................................2340.25101000
.....................................................................................................................................................................................................................TTAAGAAGGACACAATCACCAACATAGTG.............................2940.25101000
.......................................................................................................................................................................................................................AAGAAGGACACAATCACCAACATAGTG.............................2740.25101000
.................................................................................................................................................................................................................................CAATCACCAACATAGTGTCTAATAACGG..................2840.25101000
..................................................................................................................................................................................................................................AATCACCAACATAGTGTCTAATAACGG..................2740.25101000
..................................................................................................................................................AACTTCAGCTACCAAAAATGGTCCTT...................................................................................................2640.25101000
.................................................................................................................................................GAACTTCAGCTACCAAAAATGGTCCTT...................................................................................................2740.25101000
...............................................................................................................................................TAGAACTTCAGCTACCAAAAATGGTCC.....................................................................................................2740.25100010
........................................................................................................................................................................................................................................CAACATAGTGTCTAATAACGGTAGCCT............2740.25101000
................................................................................................................................ATATCTATTACCATCTAGAACTTCAGC....................................................................................................................2780.25202000
...................................................................................................................................................ACTTCAGCTACCAAAAATGGTCCTT...................................................................................................2540.25100010
...................................................................................................................................................................................................................................................CTAATAACGGTAGCCTTTGACTTGT...2540.25101000
..........................................................................................................................TAACATATATCTATTACCATCTAGAACT.........................................................................................................................2880.25201010
......................................................................................................................................................TCAGCTACCAAAAATGGTCCTTTAAATTT............................................................................................2940.25101000
.........................................................................................................................................................................................................................GAAGGACACAATCACCAACATAGTG.............................2540.25101000
...........................................................................................................................................................................................................................................CATAGTGTCTAATAACGGTAG...............2140.25100010
.........................................................................................................................................................................................................................................AACATAGTGTCTAATAACGGTAGCCT............2640.25100010
....................................................................................................................................................................................................................................................TAATAACGGTAGCCTTTGACTTGT...2440.25100010
.............................................................................................................................................................................AAATTTTGGGTCTAGTTTAG..............................................................................2040.25100010
.................................................................................................................................................................................................................GTTTTTAAGAAGGACACAATCACCAA....................................2640.25101000
...............................................................................................................................................TAGAACTTCAGCTACCAAAAATGGTCCTT...................................................................................................2940.25101000
......................................................................................TACTTAT--ATAGTCGCTTGTTGGAT...............................................................................................................................................................2450.20101000
.CGCT----G-----TCAATA---------TCAAACTCTTGGGGA..................................................................................................................................................................................................................................2650.20101000
......................................................................................TACTTAT--ATAGTCGCTTGTTGGATA-.............................................................................................................................................................2550.20100010
......................................................................................TACTTAT--ATAGTCGCTTGTTGGA................................................................................................................................................................2350.20100010
......................................................................................TACTTAT--ATAGTCGCTTGTTGGATA-AC...........................................................................................................................................................2750.20101000
.......................................................................................ACTTAT--ATAGTCGCTTGTTGGATA-ACG..........................................................................................................................................................2750.20101000
..........................................................................................TAT--ATAGTCGCTTGTTGGATA-ACGAT........................................................................................................................................................2650.20100010
.........................................................................................TTAT--ATAGTCGCTTGTTGGATA-ACGAC........................................................................................................................................................2750.20101000
.......................................................................................ACTTAT--ATAGTCGCTTGTTGGATA-A............................................................................................................................................................2550.20101000
......................................................................................TACTTAT--ATAGTCGCTTGTTGGATA-ACGA.........................................................................................................................................................2950.20101000
...........................................................................................................................................................................TTAAATTTTGGGTCTAGTT.................................................................................1960.17100010
............................................................................................................................................................................TAAATTTTGGGTCTAGTT.................................................................................1860.17100010
....................A---------TCAAACTCTTGGGGAACA--A............................................................................................................................................................................................................................2070.14101000
.....................................................CCATCTGGAAGTTTTCTTATGTCT..................................................................................................................................................................................................2470.14101000
...................................................................................................TCGCTTGTTGGATA-ACGACTT-TAACA................................................................................................................................................2670.14101000
..................................................................................................................................................................................................................................................TCTAATAACGGTAGCCTTTGACTTG....2570.14101000
....T----G-----TCAATA---------TCAAACTCTTGGGGAACA--C............................................................................................................................................................................................................................2770.14100010
................CAATA---------TCAAACTCTTGGGGAACA--A............................................................................................................................................................................................................................2470.14101000
.....................................................................................................GCTTGTTGGATA-ACGACTT-TAACA................................................................................................................................................2470.14101000
........................................................TCTGGAAGTTTTCTTATGTCTTC................................................................................................................................................................................................2370.14100010
................................................................................................TAGTCGCTTGTTGGATA-ACGACTT-T....................................................................................................................................................2570.14101000
..GCT----G-----TCAATA---------TCAAACTCTTGGGGA..................................................................................................................................................................................................................................2570.14101000
................CAATA---------TCAAACTCTTGGGGAACA--.............................................................................................................................................................................................................................2370.14101000
....T----G-----TCAATA---------TCAAACTCTTGGGGAAC................................................................................................................................................................................................................................2570.14100010
....................................................................................................................................................................................................................................................TAATAACGGTAGCCTTTGACT......2170.14101000
................CAATA---------TCAAACTCTTGGGGAACA--AT...........................................................................................................................................................................................................................2570.14100010
...............................................................................................................................TATATCTATTACCATCTAGAACTTCAG.....................................................................................................................2780.13101000
...............................................................................................................................TATATCTATTACCATCTAGAACT.........................................................................................................................2380.13101000
....................................................................................................................................CTATTACCATCTAGAACTTCAGCTAC.................................................................................................................2680.13101000
..........................................................................................................................TAACATATATCTATTACCATCTAGAAC..........................................................................................................................2780.13101000
........................................................................................................TGTTGGATA-ACGACTT-TAACATATATC..........................................................................................................................................2780.13101000
........................................................................................................................T-TAACATATATCTATTACCATCTAGAACT.........................................................................................................................2980.13101000
.................................................................................................................................TATCTATTACCATCTAGAACTTCAGC....................................................................................................................2680.13101000
........................................................................................................TGTTGGATA-ACGACTT-TAACATATATCTA........................................................................................................................................2980.13101000
................................................................................................................................ATATCTATTACCATCTAGAACT.........................................................................................................................2280.13101000
.........................................................................................................................................ACCATCTAGAACTTCAGCTACCAAAA............................................................................................................2690.11101000
droVir3
TTACT--------------------------CCAATTCCTCCGGAACA--TAACCATCTGGCATCTTTCTCAAATCCTCATGGCAATATTTAT--ATGTTCTCTTATTATGCA-ATGTCTT-CAAAATGTACCTGTCGCCTTCTAACACTTCACTAATCAAAAGTGGTCCTATAAACTTTGCATCCAACTTGGACTAATGCCGCTCTTCATTTTTCAATAGATCGTAATCCCCAACTTTGTGTCTAATGACAGCCGATTTATTTTCATCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................ATGTCTT-CAAAATGTACCTGTCGCC...................................................................................................................................2512.002200000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TCAATAGATCGTAATCCCCAACTT.................................2411.001000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................ATGTCTT-CAAAATGTACCTGTCGCCT..................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
.......................................TCCGGAACA--TAACCATCTGGC.................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCTCT------ACTTTATACG---------TCTAGCTCATTGGGTACA--TGACCATTTGGCATTTTTCGGACATTTTCATGGCAATACTTAT--ACAGTCGATTATCTTTAA-GCGACTT-TATCATATATCTGTCACCATCCAGAACTTCTACCACCAAAAATGGCCCCCTAAATTTAGGATCTAACTTTGTTTGGTTTCTTTCTTCATTTTTAAGCAAGACGTAATCACAAATTTTGTGTCTAATGACCGCTGCCTTGCTTTTATCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................CGATTATCTTTAA-GCGACT.......................................................................................................................................................19200.051100000
.......................................................................................................TTATCTTTAA-GCGACTT-TA...................................................................................................................................................19200.051100000

Generated: 05/17/2015 at 10:08 PM