dse_445

CDS [Dsec\GM24577-cds]; exon [dsec_GLEANR_7573:4]; exon [dsec_GLEANR_7573:3]; CDS [Dsec\GM24577-cds]; intron [Dsec\GM24577-in]

##################################################-------------------------------------------------------------------------------------------------------------------------################################################## CGACTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTATGTTTCATTCTAGAGATTCAATTTGATTTGAAAAATGATTTTAGCTTGCTTAGAAATTATTATGAACGGTGATGAAAAAAGTATGCTAATTTCTTTTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTCATGGAGGTGTCACCATACAAAT ************************************************.....................((............(((..(((((...((..(((((.(((((.....(((((((.....)))))))...))))).)))))..)))))))..)))....))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V113 male body	V114 embryo	M054 female body
........................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGTGT............	25	0	1	2.00	2	2	0	0
........................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGT..............	23	0	1	2.00	2	2	0	0
............AACTTTACTAAGCGTCAGG..............................................................................................................................................................................................	19	0	1	2.00	2	1	1	0
........................................................................................................................................................................................CATCTGCAGTCGGTCATGGAG................	21	0	1	1.00	1	1	0	0
....................................................................................................................................................................................TGGTCATCTGCAGTCGGTC......................	19	0	1	1.00	1	1	0	0
..........................................................................................................................................................................................TCTGCAGTCGGTCATGGAGGTGTCACCA.......	28	0	1	1.00	1	1	0	0
.....................................................................................................................................................................................GGTCATCTGCAGTCGGTCATGGAGGC..............	26	1	1	1.00	1	1	0	0
.....................................................................................................................................................................................GGTCATCTGCAGTCGGTCATG...................	21	0	1	1.00	1	0	0	1
...............................................................................................................................................................................TATCATGGTCATCTGCAGTCGGTCAT....................	26	0	1	1.00	1	1	0	0
........................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGTGTC...........	26	0	1	1.00	1	0	1	0
..................................................................................................................................................................................CATGGTCATCTGCACTCGGTCA.....................	22	1	1	1.00	1	0	1	0
....................TAAGCGTCAGGATGTTATCACTCTCG...............................................................................................................................................................................	26	0	1	1.00	1	0	1	0
........................CGTCAGGATGTTATCACTCTC................................................................................................................................................................................	21	0	1	1.00	1	0	0	1
...........................................................................................................................................................................................CTGCAGTCGGTCATGGAGGTGTCACC........	26	0	1	1.00	1	0	1	0
..........................................................................................................................................................................................TCTGCAGTCGCTCAAGGAGG...............	20	2	4	0.25	1	0	0	1
....................................................................................................................................................................................................GTCATGCAGGTGTCGCCA.......	18	2	8	0.13	1	0	0	1
...............................................................................................................TTAGAAATTATTATTAAAGGT.........................................................................................	21	2	12	0.08	1	0	0	1
.............................................GAGCAATAAGTTTCTTACG.............................................................................................................................................................	19	3	20	0.05	1	0	0	1

GCTGACCGGGCGTTGAAATGATTCGCAGTCCTACAATAGTGAGAGCTGGTCATTCAAAGAATACAAAGTAAGATCTCTAAGTTAAACTAAACTTTTTACTAAAATCGAACGAATCTTTAATAATACTTGCCACTACTTTTTTCATACGATTAAAGAAAATAAAGCAATGTCACGGATAGTACCAGTAGACGTCAGCCAGTACCTCCACAGTGGTATGTTTA ************************************************.....................((............(((..(((((...((..(((((.(((((.....(((((((.....)))))))...))))).)))))..)))))))..)))....))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V113 male body
.............................CCTCCAATCTTGAGAGCTGG............................................................................................................................................................................	20	3	2	0.50	1	1

Species	Coordinate	ID	Alignment
droSec2	scaffold_0:5998065-5998285 -	dse_445	CGACTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTATGTTTCAT---------TCTAGAGATTCAATTTGATTTGAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTAGCTTGCTTAGAAATTATTATGAACGGTGATGAAAAAAGTATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTCATGGAGGTGTCACCATACAAAT
droSim2	3l:13526560-13526780 -		CGACTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTATGTTTCAT---------TCTAGATATTAAATGTGCTTTGAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTATCTTGCTTAGTATTAATTTTGAACAGTAATGAAAAAAGTATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTTATGGAGGTGTCTCCATACAAAT
dm3	chr3L:13854849-13855068 -		CGATTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTCTGTTTGAT---------TCTAGAGATTAAATTTGCTTGAAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTGGCTTGCTTAATATTTATTTTGAACACCTATGGAA-AAATATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTGATGGAGGTGTCTCCATACAAAT
droEre2	scaffold_4784:13845320-13845514 -		CGGCTGGCACGCAACTTTACCAAGCGTCAGGACGTTATCACTCTCGACCAGTAAGTTTCTGCTCTTTCAC---------TCTGTTGATTACATTTGCTGGGAAATATGAT------------------------------------------------------------------------------------------------------------------------------TAAGATTCCTTTTAAACGGTGATGAACA-----TG-----------------------------CTTTCCCTTTACAGCGCCTATCATGGTCATCTGCAGTCTGTGATGGAGATTTCTCCATACAAGT
droYak3	3L:13937645-13937853 -		CGACTGGCCCGTAACTTTACCAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTCTCTTTTAT---------TCTATACATTAAATATGCTTTGGAAAATGTT------------------------------------------------------------------------------------------------------------------------------TAATATCATCTCTAAGCAGTGATAAAA-AAGTATG--------CTCATAAATG-----------TTTTTCCTTTACAGTGCCTATCATGGTCATCTGCAGTCCGTGATGGAGGTGTCTCCATACAAGT
droEug1	scf7180000409456:32495-32696 -		CGTCTGGCCCGTAACTTCACCAAGCGACAGGATGTTATTACTCTCGACCAGTAAGTTTCATTTGATTGGT----------------------------------------------------------AT-TATAAAAGAAAAGATTATCT----TA--------------------------------------------------------------------------------------------------TGACAAAAAATATAGGCCAATGTACTTATCTATATATATC-TTTATCTTTATCTTATAGTGCCTATCATGGACACTTGCAGTCGGTGATGGAGGTGTCTCCATACAAGT
droBia1	scf7180000302428:6070348-6070535 +		CGTCTGGCCCGTAACTTTACTAAGCGGCAGGATGTCATTACTCTCGACCAGTAAGTTTCTTTTCTTACGT-----------------------------------------------------------T-AATAATAAAATA------------TA--T-TATATTCTATT-----------------------------------------------------------------------------------------------TAAGCAACCTAACTGATCTCTA------ATTTTCCTTTTTCTTACAGTGCCTACCATGGTCACTTGCAGTCGGTGATGGAGGTGTCTCCGTACAAGT
droTak1	scf7180000415825:84538-84700 +		CGACTGGCCCGCAACTTTACAAAGCGGCAGGATGTCATCACTCTCGACCAGTAAGTTTTGTTGCAGTG----------------------------------------------------------------------------------------AAT----------------------------------------------------------------------------------------------------------CGTAAGCTAGTTTACTGATCTTC-------GCTTTCTTTTTCCCTGCAGCGCCTACCATGGTCATTTGCAGTCGGTGATGGAGGTATCTCCGTACAAGT
droEle1	scf7180000491255:2295624-2295832 -		CGCCTGGCCCGCAACTTCACAAAGCGCCAGGATGTTATCACTCTCGATCAGTAAGTATCTTTTCTTTTT-----------------------------------------------------A-A------AACCAAAACAAAAATAGTAT----TA--TGAATATTTATTTTAAAA----------------------------------------------------------------------CGAAGTTCCAATGAAG-AGC--------CTTACTGATTTCCA----------TTTCCCTATTTTTAGTGCCTACCATGGCCACTTGCAGTCGGTGATGGAGGTGTCTCCCTACAAGT
droRho1	scf7180000780188:27270-27508 -		CGATTGGCCCGCAATTTTACCAAGCGCCAGGATGTTATCACTCTGGACCAGTAAGTATCTTTTATAAACTTTTTACTTT----------------------------------------TAAAGTGTGTTT----------------------AAAAATAATGTAT-----TTAAATTAAATTTTAAAAATATGTATTTT---------------------------------TAA-----------TCAAATTCAAAT---------AAGGAACCTTACTTATTTCCC----TC-TCTCCGTTTTTATTACAGTGCCTACCATGGTCATTTGCAGTCGGTGATGGAGGTGTCTCCTTACAAGT
droFic1	scf7180000453784:168085-168301 -		CGACTGGCCCGTAACTTCACCAAGCGACAGGATGTTATTACTCTTGACCAGTAAGTTTTGTTTCTACAATCTCAAAGTT----------------------------------------TAAA-TGAGCTT----------------------AAAA--AATGTATTTCATTTAAAGCAAACTTAAAC-----------------------------TATTTGTT----GTTTGCTT-------------------------------TTA--------CTAATTAT----------ATTTCCTTTTTTTACAGTGCCTACCACGGTCACTTGCAATCGGTGATGGAGATTTCTCCCTACAAGT
droKik1	scf7180000302517:382877-383048 +		CGATTGGCCCGAAACTATACCAAGCGCCAGGATGTGATCACCCTGGACCAGTGAGTACCACCTA------------------------------------------------AGA-CTCTCCA-C------AACC----------------GATATA--TGTATATTCTATCTAA-----------------------------------------------------------------------------------------------------------AACT-----------CTCTCTTCCCTTGACAGTGCCTACCATGGCCACCTGCAGTCCGTGATGGAGGTATCGCCGTACAAGT
droAna3	scaffold_13047:1618919-1619074 -		CGCCTGGCCAGGAACTTCACCAAGCGCCAGGATGTCATCACTCTGGACCAGTAAGTCCACTTCA-----------------------------------------------------------TTCCTAT-TT--------------------TATAAC----------------------------------------------------------------------------------------------------------CGCAAG--------CTGAC--------------TCCCTTTTTCCTGCAGTGCCTATCATGGACACTTGCAGTCGGTAATGGAGGTGTCGCCCTACAAAT
droBip1	scf7180000396740:417835-418031 -		CGTTTGGCCAGGAATTTCACCAAGCGCCAAGATGTCATCACTTTGGACCAGTGAGTTTTAATTCTAT--------------------------------------------------------------------------------------------------------------TTTTTTTATAATTTTTATTTCTTAATATAAAAATATTTTCAAAAT---------------------------AAATAACTTAAAA-------------------------CC----TA-CCTCTCTTTTTCTTACAGTGCCTATCATGGACACTTGCAGTCGGTAATGGAGGTGTCTCCCTACAAGT
dp5	XL_group1e:6134850-6135025 -		CGACTGGCCCGAAACTTTACCAAGCGCCAGGATGTGATCACGCTTGACCAGTAAGTCGATCA-------------------------------------------------AAGATCTC---ACTGCCAC-CTCC----------------GC----------------------------------------------------------------CAGATGATGCTTACA-------------------------------------TG--------CCTGTG----------GCTTATCTCTCTCTTCTAGTGCCTACCATGGACATCTGCAGGCGGTGATGGAGGTGTCGCCGTACAAGT
droPer2	scaffold_21:1099901-1100076 -		CGACTGGCCCGAAACTTTACCAAACGCCAGGATGTGATCACGCTTGACCAGTAAGTCGATCA-------------------------------------------------AAGGTCTC---ACTGCCAC-CTCC----------------GC----------------------------------------------------------------GAGATGATGCTTACA-------------------------------------TG--------CCTGTG----------GCTTATCTTTCTCTTCTAGTGCCTACCATGGACATCTGCACGCGGTGATGGAGGTGTTTTCTTACAAGT
droWil2	scf2_1100000004585:8302312-8302470 +		CGTTTGGCACGTAACTTTACCAAACGACAGGATGTCATCACCTTGGACCAGTAAGTAGATTTGA------------------------------------------------TGA-TCC---AT-------A-------------------AT----------------------------------------------------------------TAGATGATT-------------------------------------------TG--------CTCATA----------AC--TTGCCTTATTTGTAGCGCCTACCATGGTCATTTGCAGTCCGTGATGGAAGTGTCGCCATATAAAT
droVir3	scaffold_12970:1536128-1536295 -		CGGCTGGCGCGCAACTATACCAAGCGCCTGGACGTGATCACGCTCGACCAGTAAGTGGAGACTG-----------------------------------------------GAGACCCC---AGTCTGAG-CTGG----------------GC----------------------------------------------------------------------------------------------------ATTAGTCTAATGTG-----------------------------CATAACAAATTCTTGCAGCGCTTACCATGGTCACTTGCAGTCCGTGATGGAGATCTCGCCGTACAAGT
droMoj3	scaffold_6359:2729613-2729791 -		CGTCTGGCGCGCAACTACACGAAGCGTCAGGATGTGATCACACTGGACCAGTAAGACATCTCCCCCCTAC---------CCCGCTCATTCC-------------------------------------------------------------------------------------------------------------------------------------------------------AAATATCGAATAGAGATTAA-------CC--------CTCGCATCTG----------TTTGTCCTCGTGCAGCGCCTATCACGGCCACTTGCAATCCGTCATGGAGATCTCGCCGTACAAGT
droGri2	scaffold_15081:1306274-1306455 -		CGCCTCGCTCGCAACTACACCAAGCGCAAGGATGTCATCACACTCGACCAGTAAGTCACACTCA-----------------------------------------------------------GTGCGATT----------------------GATCGATGCGAGT-----TTCGAGTTGGTTTGGAGTTAATGTTTCTT---------------------------------------------------------------------------------GAA---------------TCTTTTCATTTGCAGCGCTTATCACGGTCATCTGCAGGCCGTGATGGAGATCTCGCCGTACAAGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

CGACTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTATGTTTCAT---------TCTAGAGATTCAATTTGATTTGAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTAGCTTGCTTAGAAATTATTATGAACGGTGATGAAAAAAGTATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTCATGGAGGTGTCACCATACAAAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGTGT............	25	1	2.00	2	0	2	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGT..............	23	1	2.00	2	0	2	0	0
............AACTTTACTAAGCGTCAGG.............................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	1	1	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTCATGGAG................	21	1	1.00	1	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................TGGTCATCTGCAGTCGGTC......................	19	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................TCTGCAGTCGGTCATGGAGGTGTCACCA.......	28	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................GGTCATCTGCAGTCGGTCATGGAGGC..............	26	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................GGTCATCTGCAGTCGGTCATG...................	21	1	1.00	1	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................TATCATGGTCATCTGCAGTCGGTCAT....................	26	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTCATGGAGGTGTC...........	26	1	1.00	1	0	0	1	0
....................TAAGCGTCAGGATGTTATCACTCTCG..............................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
........................CGTCAGGATGTTATCACTCTC...............................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................CTGCAGTCGGTCATGGAGGTGTCACC........	26	1	1.00	1	0	0	1	0

droSim2

CGACTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTATGTTTCAT---------TCTAGATATTAAATGTGCTTTGAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTATCTTGCTTAGTATTAATTTTGAACAGTAATGAAAAAAGTATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTTATGGAGGTGTCTCCATACAAAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTTATGGA.................	20	1	6.00	6	0	2	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTTATGGAGGTGTCTCC........	29	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TGTTATCACTCTCGACCA..........................................................................................................................................................................................................................................................................................................................	18	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCGGTTATGGAGGTGTCTCC........	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTTATGGG.................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................ATG--------CTAATTTCTT-----------TTATTTCGTTACAG..................................................	27	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................CTAATTTCTT-----------TTATTTCGTTACAG..................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TCATCTGCAGTCGGTTATGGA.................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................AGGATGTTATCACTCTCGACC...........................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................CGGTTATGGAGGTGTCTCCAT......	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GTCATCTGCAGTCGGTTATGGAGGT..............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ACTAAGCGTCAGGATGTTATCA....................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GTCAGGATGTTATCACTCTCGA.............................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TAAGCGTCAGGATGTTATCACT..................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCGGTTATGGAGGTGTCC..........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GTCATCTGCAGTCGGTTATGGA.................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCGGTTATGGAGGTGTCTCC........	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTTATGGAGGT..............	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................GGTCATCTGCAGTCGGTTATGGG.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AACTTTACTAAGCGTCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................CAGTCGGTTATGGAGGTGTCTCC........	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGTCAGGATGTTATCACTCC................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGTCAGGATGTTATCACTCG................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GCAACTTTACTAAGCGTCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GTCAGGATGTTATCACTCTC...............................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AGCGTCAGGATGTTATCACTCT................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TCTGCAGTCGGTTATGGAG................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GTCATCTGCAGTCGGTTATGGAGGG..............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................GGTCATCTGCAGTCGGTTATGGA.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

CGATTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTCTGTTTGAT---------TCTAGAGATTAAATTTGCTTGAAAAAATGATT-------------------------------------------------------------------------------------------------------------------TTGGCTTGCTTAATATTTATTTTGAACACCTATGGAA-AAATATG--------CTAATTTCTT-----------TTATTTCGTTACAGTGCCTATCATGGTCATCTGCAGTCGGTGATGGAGGTGTCTCCATACAAAT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTGATGGA.................	20	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................AGTCGGTGATGGAGGTGTCTCCATAC....	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGTCAGGATGTTATC.....................................................................................................................................................................................................................................................................................................................................	18	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AGCGTCAGGATGTTATCA....................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGTCAGGATGTTATCACTCTC...............................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................ATCTGCAGTCGGTGATGGA.................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCGGTGATG...................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCGGTGATGGAGGTGCT...........	18	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCGGTGATGGTC................	17	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CGGCTGGCACGCAACTTTACCAAGCGTCAGGACGTTATCACTCTCGACCAGTAAGTTTCTGCTCTTTCAC---------TCTGTTGATTACATTTGCTGGGAAATATGAT------------------------------------------------------------------------------------------------------------------------------TAAGATTCCTTTTAAACGGTGATGAACA-----TG-----------------------------CTTTCCCTTTACAGCGCCTATCATGGTCATCTGCAGTCTGTGATGGAGATTTCTCCATACAAGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCTGTGATGGA.................	20	1	4.00	4	1	2	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................ATCTGCAGTCTGTGATGGA.................	19	1	2.00	2	0	1	0	0	0	1	0
............AACTTTACCAAGCGTCAGGAC...........................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	0	1	0	0
........ACGCAACTTTACCAAGCGTCAGGAC...........................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	1	0	1	0	0	0
.........................GTCAGGACGTTATCACTCTC...............................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
..............CTTTACCAAGCGTCAGGACGT.........................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................CATGGTCATCTGCAGTCTGTGA.....................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TCATGGTCATCTGCAGTCTGTGATGGA.................	27	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCTGTGATG...................	18	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................ATCTGCAGTCTGTGATGG..................	18	1	1.00	1	0	0	0	1	0	0	0
..............CTTTACCAAGCGTCAGGAC...........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................ATCATGGTCATCTGCAGTCTGT.......................	22	1	1.00	1	0	0	0	1	0	0	0
..........GCAACTTTACCAAGCGTCA...............................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TCTGCAGTCTGTGATGGAGAT..............	21	1	1.00	1	0	0	0	0	0	1	0
.GGCTGGCACGCAACTTTACCAAGCGTC................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................ATGGTCATCTGCAGTCTGT.......................	19	1	1.00	1	1	0	0	0	0	0	0
................TTACCAAGCGTCAGGACGTT........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
...........CAACTTTACCAAGCGTCAGGACGTT........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
...............TTTACCAAGCGTCAGGACGTTATC.....................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..........GCAACTTTACCAAGCGTCAGGACGC.........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................TATCATGGTCATCTGCAGTC..........................	20	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................TCTGCAGTCTGTGATGGA.................	18	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................CTGCAGTCTGTGATGGAGATTTCTCC........	26	1	1.00	1	0	0	0	0	1	0	0
....................CAAGCGTCAGGACGTTATC.....................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.....GGCACGCAACTTTACCAAGCGTCAG..............................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................CGCCTATCATGGTCATCTGCA.............................	21	1	1.00	1	1	0	0	0	0	0	0
............................................................GCTCTTTCAC---------TCTGTTGAT....................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0
........................CGTCAGGACGTTATCACTCTCGAC............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0

droYak3

CGACTGGCCCGTAACTTTACCAAGCGTCAGGATGTTATCACTCTCGACCAGTAAGTTTCTTCTCTTTTAT---------TCTATACATTAAATATGCTTTGGAAAATGTT------------------------------------------------------------------------------------------------------------------------------TAATATCATCTCTAAGCAGTGATAAAA-AAGTATG--------CTCATAAATG-----------TTTTTCCTTTACAGTGCCTATCATGGTCATCTGCAGTCCGTGATGGAGGTGTCTCCATACAAGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
............AACTTTACCAAGCGTCAGGAT...........................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	1	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCCGTGATGGAGGT..............	23	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCCGTGATGGA.................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................CTGCAGTCCGTGATGGAGGT..............	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...CTGGCCCGTAACTTTACCA......................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........CGTAACTTTACCAAGCGTCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................ATCTGCAGTCCGTGATGGA.................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................GGTCATCTGCAGTCCGTGATGGA.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................ATGTTATCACTCTCGACCA..........................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................ATCTGCAGTCCGTGATGGAGGT..............	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCCGTGATGGAG................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................TACCAAGCGTCAGGATGTTATCACT..................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................AAGCGTCAGGATGTTATCACTCTCGACC...........................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......................AGCGTCAGGATGTTATCACTCTCGACC...........................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....TGGCCCGTAACTTTACCAAGCGTCAG..............................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TCATGGTCATCTGCAGTCCGTGATGGA.................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
.............................................................................................................T------------------------------------------------------------------------------------------------------------------------------TAATATCATCTCTAAGCAGT............................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............CTTTACCAAGCGTCAGGAT...........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CATCTGCAGTCCGTGATGGAGGTGT............	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................GTCAGGATGTTATCACTCTCGACC...........................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAGGTGTCTC.........	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GTCATCTGCAGTCCGTGATGGAGGTGT............	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............AACTTTACCAAGCGTCAGGATG..........................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TCCGTGATGGAGGTGTCTCCA.......	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............AACTTTACCAAGCGTCAGG.............................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCCGTGATGGAGGTGTCTCC........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................CTGCAGTCCGTGATGGAGGTGTCTCCAT......	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CGTCTGGCCCGTAACTTCACCAAGCGACAGGATGTTATTACTCTCGACCAGTAAGTTTCATTTGATTGGT----------------------------------------------------------AT-TATAAAAGAAAAGATTATCT----TA--------------------------------------------------------------------------------------------------TGACAAAAAATATAGGCCAATGTACTTATCTATATATATC-TTTATCTTTATCTTATAGTGCCTATCATGGACACTTGCAGTCGGTGATGGAGGTGTCTCCATACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGTCTGGCCCGTAACTTTACTAAGCGGCAGGATGTCATTACTCTCGACCAGTAAGTTTCTTTTCTTACGT-----------------------------------------------------------T-AATAATAAAATA------------TA--T-TATATTCTATT-----------------------------------------------------------------------------------------------TAAGCAACCTAACTGATCTCTA------ATTTTCCTTTTTCTTACAGTGCCTACCATGGTCACTTGCAGTCGGTGATGGAGGTGTCTCCGTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGACTGGCCCGCAACTTTACAAAGCGGCAGGATGTCATCACTCTCGACCAGTAAGTTTTGTTGCAGTG----------------------------------------------------------------------------------------AAT----------------------------------------------------------------------------------------------------------CGTAAGCTAGTTTACTGATCTTC-------GCTTTCTTTTTCCCTGCAGCGCCTACCATGGTCATTTGCAGTCGGTGATGGAGGTATCTCCGTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CGCCTGGCCCGCAACTTCACAAAGCGCCAGGATGTTATCACTCTCGATCAGTAAGTATCTTTTCTTTTT-----------------------------------------------------A-A------AACCAAAACAAAAATAGTAT----TA--TGAATATTTATTTTAAAA----------------------------------------------------------------------CGAAGTTCCAATGAAG-AGC--------CTTACTGATTTCCA----------TTTCCCTATTTTTAGTGCCTACCATGGCCACTTGCAGTCGGTGATGGAGGTGTCTCCCTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CGATTGGCCCGCAATTTTACCAAGCGCCAGGATGTTATCACTCTGGACCAGTAAGTATCTTTTATAAACTTTTTACTTT----------------------------------------TAAAGTGTGTTT----------------------AAAAATAATGTAT-----TTAAATTAAATTTTAAAAATATGTATTTT---------------------------------TAA-----------TCAAATTCAAAT---------AAGGAACCTTACTTATTTCCC----TC-TCTCCGTTTTTATTACAGTGCCTACCATGGTCATTTGCAGTCGGTGATGGAGGTGTCTCCTTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CGACTGGCCCGTAACTTCACCAAGCGACAGGATGTTATTACTCTTGACCAGTAAGTTTTGTTTCTACAATCTCAAAGTT----------------------------------------TAAA-TGAGCTT----------------------AAAA--AATGTATTTCATTTAAAGCAAACTTAAAC-----------------------------TATTTGTT----GTTTGCTT-------------------------------TTA--------CTAATTAT----------ATTTCCTTTTTTTACAGTGCCTACCACGGTCACTTGCAATCGGTGATGGAGATTTCTCCCTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CGATTGGCCCGAAACTATACCAAGCGCCAGGATGTGATCACCCTGGACCAGTGAGTACCACCTA------------------------------------------------AGA-CTCTCCA-C------AACC----------------GATATA--TGTATATTCTATCTAA-----------------------------------------------------------------------------------------------------------AACT-----------CTCTCTTCCCTTGACAGTGCCTACCATGGCCACCTGCAGTCCGTGATGGAGGTATCGCCGTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CGCCTGGCCAGGAACTTCACCAAGCGCCAGGATGTCATCACTCTGGACCAGTAAGTCCACTTCA-----------------------------------------------------------TTCCTAT-TT--------------------TATAAC----------------------------------------------------------------------------------------------------------CGCAAG--------CTGAC--------------TCCCTTTTTCCTGCAGTGCCTATCATGGACACTTGCAGTCGGTAATGGAGGTGTCGCCCTACAAAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.........AGGAACTTCACCAAGCGCC................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................CTTGCAGTCGGTAATGGAGGTGTC...........	24	1	2.00	2	1	0	0	0	1	0
..............................GATGTCATCACTCTGGACCATGC.......................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
........CAGGAACTTCACCAAGCGCCAG..............................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
............................AGGATGTCATCACTCTGGAC............................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.......................GCGCCAGGATGTCATCACTCTG...............................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...............TTCACCAAGCGCCAGGATG..........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCGGTAATGGAGGTGT............	20	1	1.00	1	0	0	0	0	0	1
..............................GATGTCATCACTCTGGACC...........................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....GGCCAGGAACTTCACCAAGCGCCAGG.............................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................AGGATGTCATCACTCTGGACCAT.........................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............ACTTCACCAAGCGCCAGGATGTCAT......................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
......GCCAGGAACTTCACCAAGCGCCAGGA............................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..........GGAACTTCACCAAGCGCCAG..............................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...........GAACTTCACCAAGCGCCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
......................AGCGCCAGGATGTCATCACTCTGGACCA..........................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.................CACCAAGCGCCAGGATGTCATCACT..................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.....GGCCAGGAACTTCACCAAGCGCCAGGAT...........................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCGGTAATGGAGGTGTCGCCCT......	23	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................ACTTGCAGTCGGTAATGGAGGTGTCGCC........	28	1	1.00	1	0	0	0	0	1	0
......GCCAGGAACTTCACCAAGCGCCA...............................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCGGTAATGGAGGTGTCGCC........	25	1	1.00	1	1	0	0	0	0	0
.....GGCCAGGAACTTCACCAAGCGC.................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GACACTTGCAGTCGGTAATGGA.................	22	1	1.00	1	0	0	0	0	1	0
................TCACCAAGCGCCAGGATGTCATCACT..................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.......CCAGGAACTTCACCAAGCGC.................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
.................CACCAAGCGCCAGGATGTCATC.....................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...........GAACTTCACCAAGCGCCAGG.............................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GTAATGGAGGTGTCGCCCTACA...	22	1	1.00	1	0	0	0	0	1	0
.................................GTCATCACTCTGGACCATGC.......................................................................................................................................................................................................................................................................................................................	20	6	0.17	1	0	1	0	0	0	0

droBip1

CGTTTGGCCAGGAATTTCACCAAGCGCCAAGATGTCATCACTTTGGACCAGTGAGTTTTAATTCTAT--------------------------------------------------------------------------------------------------------------TTTTTTTATAATTTTTATTTCTTAATATAAAAATATTTTCAAAAT---------------------------AAATAACTTAAAA-------------------------CC----TA-CCTCTCTTTTTCTTACAGTGCCTATCATGGACACTTGCAGTCGGTAATGGAGGTGTCTCCCTACAAGT	Size	Hit Count	Total Norm	Total
No Reads

dp5

CGACTGGCCCGAAACTTTACCAAGCGCCAGGATGTGATCACGCTTGACCAGTAAGTCGATCA-------------------------------------------------AAGATCTC---ACTGCCAC-CTCC----------------GC----------------------------------------------------------------CAGATGATGCTTACA-------------------------------------TG--------CCTGTG----------GCTTATCTCTCTCTTCTAGTGCCTACCATGGACATCTGCAGGCGGTGATGGAGGTGTCGCCGTACAAGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................TGGACATCTGCAGGCGGTGA.....................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
........................CGCCAGGATGTGATCACGCTTGACC...........................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	1	0	1	0	0	0	0	0	0
..........GAAACTTTACCAAGCGCCAG..............................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................TGATGGAGGTGTCGCCGTACA...	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................ATGGACATCTGCAGGCGGTGATGGA.................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................GCCTACCATGGACATCTGCAGGCGGT.......................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................CTACCATGGACATCTGCAGGCGGTG......................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................CGCCAGGATGTGATCACGCTTGAC............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TGGACATCTGCAGGCGGTGAT....................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................GGTGATGGAGGTGTCGCC........	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................CGCCAGGATGTGATCACGCTTGACCA..........................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............CTTTACCAAGCGCCAGGAT...........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.GACTGGCCCGAAACTTTACCAAGCGC.................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GGCGGTGATGGAGGTGTCGCC........	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................ATGGACATCTGCAGGCGGTG......................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0

droPer2

CGACTGGCCCGAAACTTTACCAAACGCCAGGATGTGATCACGCTTGACCAGTAAGTCGATCA-------------------------------------------------AAGGTCTC---ACTGCCAC-CTCC----------------GC----------------------------------------------------------------GAGATGATGCTTACA-------------------------------------TG--------CCTGTG----------GCTTATCTTTCTCTTCTAGTGCCTACCATGGACATCTGCACGCGGTGATGGAGGTGTTTTCTTACAAGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................TACCAAACGCCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0
..............................GATGTGATCACGCTTGACC...........................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
........................CGCCAGGATGTGATCACGCTTGAC............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............AACTTTACCAAACGCCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...............................ATGTGATCACGCTTGACC...........................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..................ACCAAACGCCAGGATGTGAT......................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0

droWil2

CGTTTGGCACGTAACTTTACCAAACGACAGGATGTCATCACCTTGGACCAGTAAGTAGATTTGA------------------------------------------------TGA-TCC---AT-------A-------------------AT----------------------------------------------------------------TAGATGATT-------------------------------------------TG--------CTCATA----------AC--TTGCCTTATTTGTAGCGCCTACCATGGTCATTTGCAGTCCGTGATGGAAGTGTCGCCATATAAAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCAT......	19	1	7.00	7	0	0	4	3	0
.................................................................................................................................................................................................................................................................................................................................................CCGTGATGGAAGTGTCGCCAT......	21	1	6.00	6	0	0	3	3	0
.......................................................................................................................................................................................................................................................................................................................................CATTTGCAGTCCGTGATGGAAGT..............	23	1	5.00	5	0	0	4	1	0
...............................................................................................................................................................................................................................................................................................................................................GTCCGTGATGGAAGTGTCGCC........	21	1	4.00	4	0	0	2	2	0
....................................................................................................................................................................................................................................................................................................................................GGTCATTTGCAGTCCGTGATGGAAGT..............	26	1	4.00	4	0	1	3	0	0
.................................................................................................................................................................................................................................................................................................................................................CCGTGATGGAAGTGTCGCCA.......	20	1	3.00	3	0	0	2	1	0
.......................................................................................................................................................................................................................................................................................................................................CATTTGCAGTCCGTGATGGAA................	21	1	3.00	3	0	0	0	3	0
...............................................................................................................................................................................................................................................................................................................................................GTCCGTGATGGAAGTGTCGCCAT......	23	1	3.00	3	0	0	1	2	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCCGTGATGGAAGTGTCGCC........	24	1	3.00	3	0	0	3	0	0
...............TTTACCAAACGACAGGATGT.........................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
.....................................................................................................................................................................................................................................................................................................................................GTCATTTGCAGTCCGTGATGGAAGTGT............	27	1	2.00	2	0	0	2	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCCGTGATGGAAGTGTCGC.........	20	1	2.00	2	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAAGTGTCGCC........	25	1	2.00	2	0	0	1	1	0
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCATATA...	22	1	2.00	2	0	0	1	1	0
.......CACGTAACTTTACCAAACG..................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0
..............CTTTACCAAACGACAGGATGT.........................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................GTCATTTGCAGTCCGTGATGGAA................	23	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................CATTTGCAGTCCGTGATGGAAGTGT............	25	1	2.00	2	0	0	2	0	0
..........GTAACTTTACCAAACGACAGGATGT.........................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	2	0
........................................................................................................................................................................................................................................................................................................................................ATTTGCAGTCCGTGATGGAA................	20	1	2.00	2	0	0	0	1	1
.....GGCACGTAACTTTACCAAACGACA...............................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................GATGGAAGTGTCGCCATAT....	19	1	2.00	2	0	0	1	1	0
...........................CAGGATGTCATCACCTTGGA.............................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	1	1	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCCGTGATGGAAGTGTCGC.........	23	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................TTTGTAGCGCCTACCATGGT.....................................	20	1	1.00	1	0	0	0	1	0
......................AACGACAGGATGTCATCACCTTGGA.............................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCCGTGATGGAAGTGTCGCCAT......	26	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................CCGTGATGGAAGTGTCGCCATA.....	22	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................ATGGTCATTTGCAGTCCGTGATG...................	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................GATGGAAGTGTCGCCATA.....	18	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................TACCATGGTCATTTGCAGTCCGTGAT....................	26	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................CTACCATGGTCATTTGCAGTCC.........................	22	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCATATAAA.	24	1	1.00	1	0	0	1	0	0
...TTGGCACGTAACTTTACCAAACGACAGG.............................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0
............AACTTTACCAAACGACAG..............................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................CCGTGATGGAAGTGTCGCCATATA...	24	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCATATAA..	23	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................TTGCAGTCCGTGATGGAAG...............	19	1	1.00	1	0	0	0	1	0
.........................GACAGGATGTCATCACCTTGGACCACGC.......................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................CGTGATGGAAGTGTCGCCATATA...	23	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................ATGGTCATTTGCAGTCCG........................	18	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................GATGGAAGTGTCGCCATATAAA.	22	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCATA.....	20	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAAGTGTC...........	22	1	1.00	1	0	0	0	1	0
..................................................................................................................A-TCC---AT-------A-------------------AT----------------------------------------------------------------TAGATGATT-------------------------------------------TG--------CT...................................................................................	22	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAAGT..............	19	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAAGTGTCGCCAT......	27	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................CAGTCCGTGATGGAAGTGTCGCCA.......	24	1	1.00	1	0	0	1	0	0
................TTACCAAACGACAGGATGT.........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
..............CTTTACCAAACGACAGGATGC.........................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCCGTGATGGAAGTGTCGCCA.......	22	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................GCCTACCATGGTCATTTGCAGT...........................	22	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................CCTACCATGGTCATTTGCAGTC..........................	22	1	1.00	1	0	0	0	1	0
......GCACGTAACTTTACCAAACGACAGGAT...........................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................GTCATTTGCAGTCCGTGATGGAAG...............	24	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................CGTGATGGAAGTGTCGCCAT......	20	1	1.00	1	0	0	1	0	0
......GCACGTAACTTTACCAAACG..................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................TACCATGGTCATTTGCAGTCC.........................	21	1	1.00	1	0	0	0	1	0
.............ACTTTACCAAACGACAGGAT...........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................TACCATGGTCATTTGCAGT...........................	19	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................GCAGTCCGTGATGGAAGTGTCGCCA.......	25	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................TACCATGGTCATTTGCAGTC..........................	20	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................CATGGTCATTTGCAGTCCGTGATGGAA................	27	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................TTTGCAGTCCGTGATGGAAGTGTCGCC........	27	1	1.00	1	0	0	0	1	0
............AACTTTACCAAACGACAGG.............................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................CGCCTACCATGGTCATTTGCAGTCCGT.......................	27	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................CCATGGTCATTTGCAGTCCGTGAT....................	24	1	1.00	1	0	0	1	0	0
............AACTTTACCAAACGACAGGATGG.........................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................CCGTGATGGAAGTGTCGC.........	18	1	1.00	1	0	0	0	1	0
..................................................GTAAGTAGATTTGA------------------------------------------------TGA-T.......................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................GTGATGGAAGTGTCGCCATAT....	21	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................CTACCATGGTCATTTGCAGTC..........................	21	1	1.00	1	0	0	1	0	0
..................................................GTAAGTAGATTTGA------------------------------------------------TGA-TCC---AT-------A-------------------AT----------------------------------------------------------------TA.................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................CGCCTACCATGGTCATTTGCAGT...........................	23	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................TCATTTGCAGTCCGTGATG...................	19	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................ATGGTCATTTGCAGTCCGT.......................	19	1	1.00	1	0	0	0	1	0
.................................GTCATCACCTTGGACCACGC.......................................................................................................................................................................................................................................................................................................................	20	5	0.20	1	0	0	0	1	0

droVir3

CGGCTGGCGCGCAACTATACCAAGCGCCTGGACGTGATCACGCTCGACCAGTAAGTGGAGACTG-----------------------------------------------GAGACCCC---AGTCTGAG-CTGG----------------GC----------------------------------------------------------------------------------------------------ATTAGTCTAATGTG-----------------------------CATAACAAATTCTTGCAGCGCTTACCATGGTCACTTGCAGTCCGTGATGGAGATCTCGCCGTACAAGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............AACTATACCAAGCGCCTGGACGT.........................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................ATACCAAGCGCCTGGACGT.........................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AACTATACCAAGCGCCTGGACGTG........................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................ATGTG-----------------------------CATAACAAATTCTTGCAGCG................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GCAACTATACCAAGCGCCTGGACGT.........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GCAACTATACCAAGCGCCTGGACGTGATCACGCTCGACC...........................................................................................................................................................................................................................................................................................................................	39	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGCCTGGACGTGATCACGCT................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGCCTGGACGTGATCACG..................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGAGATCTCGCCGTACAA..	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AACTATACCAAGCGCCTGGACGTGA.......................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......CGCGCAACTATACCAAGCGCCTGGA............................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GCCTGGACGTGATCACGCTCGACC...........................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............AACTATACCAAGCGCCT...............................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................CACTTGCAGTCCGTGATGGAGATCTCGCC........	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CTGGACGTGATCACGCTCGAC............................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................TGCAGTCCGTGATGGAGATCTCGCC........	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGCCTGGACGTGATC.....................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AAGCGCCTGGACGTGATCACGC.................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0

droMoj3

CGTCTGGCGCGCAACTACACGAAGCGTCAGGATGTGATCACACTGGACCAGTAAGACATCTCCCCCCTAC---------CCCGCTCATTCC-------------------------------------------------------------------------------------------------------------------------------------------------------AAATATCGAATAGAGATTAA-------CC--------CTCGCATCTG----------TTTGTCCTCGTGCAGCGCCTATCACGGCCACTTGCAATCCGTCATGGAGATCTCGCCGTACAAGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............AACTACACGAAGCGTCAGGATG..........................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................CTATCACGGCCACTTGCAATCCGT.......................	24	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GTCATGGAGATCTCGCCG.......	18	1	1.00	1	0	0	0	1	0	0
..............CTACACGAAGCGTCAGGATGTGATC.....................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................................................GCAATCCGTCATGGAGATCTCGCC........	24	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................TAA-------CC--------CTCGCATCTG----------TTTGTCCTCGTG.....................................................	27	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................ATCTG----------TTTGTCCTCGTGCAG..................................................	20	1	1.00	1	1	0	0	0	0	0
...................CGAAGCGTCAGGATGTGATCACA..................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..............CTACACGAAGCGTCAGGATGT.........................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1

droGri2

CGCCTCGCTCGCAACTACACCAAGCGCAAGGATGTCATCACACTCGACCAGTAAGTCACACTCA-----------------------------------------------------------GTGCGATT----------------------GATCGATGCGAGT-----TTCGAGTTGGTTTGGAGTTAATGTTTCTT---------------------------------------------------------------------------------GAA---------------TCTTTTCATTTGCAGCGCTTATCACGGTCATCTGCAGGCCGTGATGGAGATCTCGCCGTACAAGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................AAGCGCAAGGATGTCATCACACT................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1
....................CAAGCGCAAGGATGTCATCA....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1
................ACACCAAGCGCAAGGATGTCA.......................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1
...................CCAAGCGCAAGGATGTCATC.....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0
...................CCAAGCGCAAGGATGTCATCA....................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1
......GCTCGCAACTACACCAAGC...................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0
...................................................................................................................................................................................................................................................................................................................................CGGTCATCTGCAGGCCGT.......................	18	1	1.00	1	1	0
...CTCGCTCGCAACTACACCAAGC...................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1
.........................GCAAGGATGTCATCACACTCGACCACG........................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0
.............................................................................................................................................................................................................................................................................................................................TTATCACGGTCATCTGCAG............................	19	1	1.00	1	1	0

dse_445

scaffold_0:5998115-5998235 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads