ID:

dse_443

 Coordinate:

scaffold_0:5645885-5646035 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.3 -22.2

Flybase annnotation

exon [dsec_GLEANR_8391:2]; CDS [Dsec\GM25424-cds]; intron [Dsec\GM25424-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAATAAAAAATCTATATATATTTTAAATTGAATATAGAAATCCGAAAACCCACACTCGCACACACACACCAGCGCAGGGCCAGAGAGCGCGAGCGGAAATACTTAAAAAGCTGAAAAAAGTGGAAGTAAAAAAGTGGCCGTATCGGTGTGCGGCAGCTAGAAAGTGTGGCCAAAAGTGACATCACACTCCGGTCGTTTAGCAAAAAAGCAGCAGCAGCAGCACCAACAGCAGCAGCAGGAGCTAAAGCAT
****************************************************************........((((...(((.((..(((...((.....(((((.....(((......)))..))))).....))...))).)))))..)).))************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
 V113
male body		 V115
head
...........................................................................................................................GAAGTAACAAGGTAGCCGTA............................................................................................................ 20 3 1 3.00 3 0 3 0 0
................................................................................................................................AAAAAAGTGGCCGTATCGGTGTGCGGC................................................................................................ 27 0 1 2.00 2 2 0 0 0
....................................................................................................................................AAGTGGCCGTATCGGTGTGCGGCA............................................................................................... 24 0 1 1.00 1 0 0 1 0
................................................................ACACACCAGCGCAGGGCCAGAG..................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
.....................................................................................................................................AGTGGCCGTATCGGTGTGC................................................................................................... 19 0 1 1.00 1 1 0 0 0
...............................AATATAGAAATCCGAAAACCCAC..................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
..........................................................................GCAGGGCCAGAGAGCGCGAGCGGAAA....................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0
...................................................................................................................................................................................ACATCACACTCCGGTCGTT..................................................... 19 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................................CACCAACAGCAGCAGCAGGAGC........ 22 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................................GCAGCAGCAGGAGCTAAAGC.. 20 0 1 1.00 1 1 0 0 0
..............................................................................................................................GTAAAAAAGTGGCCGTATCGGTGTGCGGC................................................................................................ 29 0 1 1.00 1 0 0 1 0
...........................................................................................................................................................................................................................AGCACCAACAGCAGCAGCAGG........... 21 0 1 1.00 1 0 0 0 1
...............................................................................................................................TATAAAAATGGCCGTATCG......................................................................................................... 19 2 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................AACAGCAGCAGCAGGAGCTAAAGC.. 24 0 1 1.00 1 1 0 0 0
.....................................................................................................................................AGTGGCCGTATCGGTGTGCGGCA............................................................................................... 23 0 1 1.00 1 0 0 1 0
................................................................................................................................................................................GTGACATCACACTCCGGTCGT...................................................... 21 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................AGAAAGTGTGGCCAAAAGTGACA..................................................................... 23 0 1 1.00 1 0 0 1 0
.................................................................................................................................................................AAAGTGTGGCCAAACGGGACC..................................................................... 21 3 2 0.50 1 0 0 0 1
......................................................................................................................................GTAGCCGTATCGGGGTGC................................................................................................... 18 2 2 0.50 1 0 1 0 0
...................................................................................................................................................................................................GTTTAGCATAAAATCAGCAG.................................... 20 2 2 0.50 1 0 1 0 0
..............................................................................................................................GTAACAAGGTAGCCGTATCG......................................................................................................... 20 3 5 0.40 2 0 0 2 0
..............................................................................................................................GTAACAAGGTAGCCGTATC.......................................................................................................... 19 3 13 0.38 5 2 1 1 1
..............................................................................................................................GTAACAAGGTAGCCGTATCGG........................................................................................................ 21 3 3 0.33 1 0 1 0 0
...................................................................................................................................AAGGTAGCCGTATCGGGGTG.................................................................................................... 20 3 3 0.33 1 0 1 0 0
............................................................................................................................AAGTAACAAGGTAGCCGTA............................................................................................................ 19 3 7 0.14 1 0 1 0 0
.................................................................................................................................................................................................................................AACAGCAGCAGCAGGAGC........ 18 0 18 0.11 2 2 0 0 0
...............................................................................................................................AAAAAAAGTTGCCGTATAGG........................................................................................................ 20 3 10 0.10 1 0 0 1 0
................................................................................................................................AACAAGGTAGCCGTATCGG........................................................................................................ 19 3 11 0.09 1 1 0 0 0
...........................................................................................................................GAAGTAACAAGGTAGCCGT............................................................................................................. 19 3 11 0.09 1 0 0 1 0
................................................................................................................................................................................................................................CAACAGCAGCAGCAGGAGC........ 19 0 14 0.07 1 1 0 0 0
............................................................................................................................................................................................................................GCACCAACAGCAGCAGCA............. 18 0 17 0.06 1 0 0 0 1
....................................................................................................................................................................................................................................AGCGGCAGCTGGAGCTAATGC.. 21 3 19 0.05 1 0 0 1 0

Anti-sense strand reads

TTTTATTTTTTAGATATATATAAAATTTAACTTATATCTTTAGGCTTTTGGGTGTGAGCGTGTGTGTGTGGTCGCGTCCCGGTCTCTCGCGCTCGCCTTTATGAATTTTTCGACTTTTTTCACCTTCATTTTTTCACCGGCATAGCCACACGCCGTCGATCTTTCACACCGGTTTTCACTGTAGTGTGAGGCCAGCAAATCGTTTTTTCGTCGTCGTCGTCGTGGTTGTCGTCGTCGTCCTCGATTTCGTA
************************************************************************************************........((((...(((.((..(((...((.....(((((.....(((......)))..))))).....))...))).)))))..)).))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
.....................................................................GGTCGCGTCCGGTACTCTC................................................................................................................................................................... 19 3 10 0.10 1 1
.....................AAAAATTAACTTATGTCTT................................................................................................................................................................................................................... 19 2 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_0:5645835-5646085 + dse_443 AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACA--CCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CA---CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---
droSim2 3l:13174222-13174475 + dsi_17150 AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACA--CCAG-------------CGCTGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CAGCAGCACCAA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---
dm3 chr3L:13470733-13470993 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CA--CAAACA--CTAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAACAGCAGCAGCAGCAGCACCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---
droEre2 scaffold_4784:13483558-13483805 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACATACCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA----AAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGCAGCAACAGCAG---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---
droYak3 3L:13573286-13573549 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACACG-------------CAC----ACA-------CACACACACA--CCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-CAAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CAGCAACAGCAA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---
droEug1 scf7180000409121:15555-15782 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCA-------------CAC----TCG-------CACACACACA--CAAA-------------CGCAGGGCCG-CAGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTTAA------AAAGTGGAAGTAAAA--TAAAAATT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGTT-------C----------------------------------------------------------------------------------------------AG-----------------------------CG-----------------------------------AAAAAGGAG-CAAACGTTT---
droBia1 scf7180000302428:1318187-1318457 - AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-ACCGAAA-AACCCACACTCG-------------CAC----ACGCTGGCAGCGCACACACA--CTGA-------------CG-AGAGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAACAAGCCAAAGCTAAAGCTAAAACGTC--------------GAAAAAGTGGAAGTA------A-AAAGT----------------------------------------------GGCCGTGTCGGTGCGAGCGGCGTCTAGAAAGTGTGGC--CAACAAAAGTGACATCACACTCCGGC-------C----------------------------------------------------------------------------------------------AGCAGAAGGGCAGGAAAGT-------CAGCCAA-----------------------------------GG-----AGCCTAGGGTTT---
droTak1 scf7180000415332:16635-16888 - AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG-------------CAG----T---------CACACACATA--CGAG-------------CGCTGGGCG--AAGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTAAAAGGCAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGTGAGCGGCATCTAGAAAGTGTGGC--CAA--AAAGTGACATCACACTCCGGG-------CAG-----------------------------------CAG-------------AAAAACAGCAGCAGGAG---------CAGGAACA--------T----------------------------ACG-----------------------------------AG-----AA-CTA-CGAAT---
droEle1 scf7180000491255:1919101-1919336 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAAAAACCCACACTCA--CTCACCAAA--CAC--ACA---------CACACACACA--CGCG-------------CGCAGGGCCAAAAGAGAGCGCGAGCGAGG------------------------------CGAGCGGAAATACTTAAAAA---A------AAG----------------CTGAAAAGCAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------G------------------GCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGC-------C----------------------------------------------------------------------------------------------AGA--------------------------AGCA-----------------------------------GG-----AG-CAAAA---TTGC
droRho1 scf7180000779509:64922-65141 + AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCA-------------CTCACACA---------CACACTGACA--CACG-------------CGCAGGGCCAAAAGAGAGCGCGAGCGAG-------------------------------CAAGCGGAAATACTAAA-------------AAG----------------CTAAAAAGC--AAAGTGGAAGTA------AAAAAGT----------------------------------------------G------------------GCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGA-------C----------------------------------------------------------------------------------------------CGC--------------------------AGCA-----------------------------------GG-----AG-CTAAA---TTGC
droFic1 scf7180000454048:229559-229813 - AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGACA-AACCCAC--TCGCACACA---CACACAC----TCG-------CA--CACACA--CAAA-----CA----CACACAGGGCCA-CAGAGAGCGCGA---------------------------------------GCGGAAATACTAAAA------------C-G--------TTAAAAAGCTTG-------AAAGTGGAAGTAGAAACAAAAAATT----------------------------------------------GGCCGA-----------------GTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGG-------C-----------------------------------------------------------AGCAAAATCAG---------C---------------GC--------A------TCAGGAGCAAGCCAA----------------------------AAAAAAAAA-----------AA---TTAC
droKik1 scf7180000302808:542481-542721 - TAAATAAA-AAATCTATA-------TATATTTTAAATTGAATTTAGAAA-AGCGAAC--GCACACAC----------------------------------------ACT--CGAG----------------AGAGCG---AGAGCGCGCG---------------------------GCAAAAGCTTGCAGCGGAAATACTGAAA------------G-G------------------------C--AAAGTGGAAGTA------A--AAGT----------------------------------------------GCCTGTGTCTGTGT--GCGGCCGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGG------G--------------------------------------CAG-------------CAGAGCTGCGATAGCAG---------GAGTAACAGGAGTACATC--------------------------AGCG-----------------------------------AG-----AA-ATCGCGCGC---
droAna3 scaffold_13337:21963269-21963605 - AAAATAAA-AAAGCTATA-------TATATTTTAAATTCAATATAGAAA-TCCGAAA--ACATACAAACG------------------------------TACGTAC------------------------------------GGAGCG-GACCGAGC-------CGAAAGCCAAAAGCCAAAAGCTTGCAGCGGAAATACTCAAA------------G-G------------------------C--AAAGTGGAAGTA------AAA-AGTATC------TGTGCGTTTGTGTGCGC--------------------GGCTGCATTGGTGT--GCGGTTGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGCA--------GAGTCGCCTTTTGGGGA--AGCATCGTCGCAGTTCCCATT---TCGCATTTCGCATTTATCA------------------------GGAG--CACG--------------------------GGTACGGGCTCGAATACACGTACAACGTGCGAAGAAAC-AG-----AG-CCAGCGCAG---
droBip1 scf7180000396730:433047-433338 - AAAATAAA-AAAGCTATA-------TATATTTTAAATTCAATATAGAAA-TCCGAAA--ACATACAAACG------------------------------TGC----------------------------------------AGAGCG-GACCGAGC-------CGAA-------AGCCAAAAGCTTGCAGCGGAAATACTCAAA------------G-G------------------------C--AAAGTGGAAGTA------AAA-AGTATC------TGTGAGTTTGTGTGCGC--------------------GACTGCATTGGTGT--GCGGTTGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGCA--------GAGTCGCCTTTTGGGGA--AGCATCGTCGCAGTTCGCAGT---TCGCATTTCGCATTTA------------------------TCAGGAG--CACG--------------------------GGTA-----------------------------------CG-----AG-CTCGAATAC---
dp5 XR_group8:4039131-4039438 - AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TACAAAA--GCACACACACG------------------------------G------------TAG-------------A-------------GGAGTG-GAAG-------------G-------GAGACAAAAGATTGCAGCGGAAATACTAAAA------------AAG----------------CAAAAA-GCGAAAAGTGGAAGTGGA----AAAAAGTGTC------TG--CTTTTGTGTGTG------------------------------TGTGT--TTGTGTGTTAGAAAGTGTGGC--CAG---AAGTGACATCACACCCAGAG---------AAGGCGACGCGGGGACAAGAGCATCAGAGTGATTAGCAGGAGCCAGCCGTCGAGAAGTATCAGCAGGAG---------AAGCGCCCACAA--AAGC--------------------------GGCG-----------------------------------AA-----AA-TTAACGCGC---
droPer2 scaffold_29:271269-271576 - AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TACAAAA--GCACACACACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------GAGACAAAAGATTGCAGCGGAAATACTAAAA------------AAG----------------CAAAAA-GCGAAAAGTGGAAGTGGA----AAAAAGTGTC------TG--CTTTTGTGTGTG------------------------------TGTGT--TTGTGTGTTAGAAAGTGTGGC--CAG---AAGTGACATCACACCCGGAG---------AAGGCGACGCGGGGACAAGAGCATCAGAGCGATTAGCAGGAGCCAGCCGTTGAGAAGTATCAGCAGGAG---------AAGCGCCCACAA--AAGC--------------------------GGCG-----------------------------------AA-----AA-TTAACGCGC---
droWil2 scf2_1100000004511:787364-787473 - AAAATAAAAAAATCTATA-------TATAT-TTAAATTGAATAA-AAAA-TCAAAAA--AAATAAATACC-----------AACGT----TCG-------CC--TAGAGA--GTCA-------------CACAGAGAG---AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:17580394-17580628 + AAAATATTTTTATCTATAGGTGTTGTATAT-TTAAATTGAATATATAAA-TACAAAG--CATCACAC-CG------------------------------CGCACACATA--ACAGAAGGAGAGATCGAAACAGAGAA---AGAGAGAGAGA----------GAGAGAG-------ACCTTAAAGCGGCCAACGGAAGTACGTAAA------------A-G----------------C---------------------A------AAA-AGTATCG-AGAGTG--CATTCGTGTGCGTGTGCT-----GAACAGCT---GCC------------GTGGCTGTTAGAAAGTGTAGC--CAA--AGAGTGACATCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:8937798-8938008 + GAAATCAA-AAACTTTTG-------T---TTCTAAAACTCATGTTGAAA-TCCGCAC--ACGTTCACACA-------------CAC----A---------CGCACACACA--CAAG-------------CACACGCAC---TAGAAGCTTGT---------------------------------------GGGTGAAT--TTTGG------------ATT----------------TTGGAA------AAGTGTTGCCAG-C--CAACAACA-AAG-A----------------------------------------GAC-------ACAT--GCTGCAGCTATAATA---------------------------------------------------------------------------------A-------------GTATGCAGCAGCAGCAG---------CA---GCGGCAG--CAGC--------------------------AGCA-----------------------------------GC-----AG-CAGCAGCAG---
droGri2 scaffold_15110:14601485-14601755 - AAAATAATTTTATCTATAGGTTTTGTATAT-TTAAATTGAATATATAAAATACAAAGCAG--CACACACC----G---AAA--CAC--ACA---------CACACACAGA--GAAA-----CA----CATAGAAAAAG---AGAGAGAGCGA----GGGGCAGAGAGAG-------AGCT-TGAGCTTCTAACGGAAATACGTAAA------------A-G----------------CCAAAA-AC--AAA---CAACAA------AAAAACTGTCGGAGAGTG--CATCCGTGTGCGTGCGCTGAGCTGAGCAGCTGCCGCC------------GTCGCTGTTAGAAAGTGTAGCGCCAA--AGAGTGACATCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACA--CCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CA---CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................A------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGC............................................................................................................................................................................................................................................2712.0020020
.............................................................................................................................................................................................................................................................................AAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCA...........................................................................................................................................................................................................................................2411.0010100
.........................................................................................................ACACA--CCAG-------------CGCAGGGCC---AGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................................................................................................................................................................................................................................................................AGT----------------------------------------------GGCCGTATCGGTGT--GC...............................................................................................................................................................................................................................................1911.0010010
.......................................AATATAGAAA-TCCGAAA--ACCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..................................................................................................................................GCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.................................................................................................................................................................................................................................................................................................................................................................................ACATCACACTCCGGTCGTT............................................................................................................................................................................................1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........2211.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGC.....2011.0010010
.................................................................................................................................................................................................................................................................GTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGC............................................................................................................................................................................................................................................2911.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CA---CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----...............2111.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGC.....2411.0010010
..............................................................................................................................................................................................................................................................................AGT----------------------------------------------GGCCGTATCGGTGT--GCGGCA...........................................................................................................................................................................................................................................2311.0010100
..............................................................................................................................................................................................................................................................................................................................................................................GTGACATCACACTCCGGTCGT.............................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................AGAAAGTGTGGC--CAA---AAGTGACA............................................................................................................................................................................................................2311.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........18180.1120020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........19140.0710010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CA---CCAACAG--CAGC--------------------------AGCA-----------------------------------......................18170.0610001
droSim2
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACA--CCAG-------------CGCTGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CAGCAGCACCAA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAGCAGCACCAA--CAGC--------------------------.............................................................18151.1317000017000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTCCGGTCGTTTAG--------------------------------------CAA-------------AAA................................................................................................................................2011.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCTAGAAAGTGTGGC--CAA---AAGTGAC.............................................................................................................................................................................................................2511.00100010000000000000
......................................................................................................................................GGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTT.....................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CACACTCCGGTCGTTTAG--------------------------------------C..................................................................................................................................................1911.00100100000000000000
.....................................................................................................................................GGGCC---AGAGAGCGCGA---------------------------------------GCGGA............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
....................................................................CG------------------------------CACACACACA--CCAG-------------CGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................GT--GCGGCAGCTAGAAAGTGT...............................................................................................................................................................................................................................2011.00101000000000000000
dm3
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CA--CAAACA--CTAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAACAGCAGCAGCAGCAGCACCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAA.......2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTA.........2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000010000
..............................................................................................................................................................................................................................................................................AGT----------------------------------------------GGCCGTATCGGTGT--GCGGC............................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................GCGGCAGCTAGAAAGTGT...............................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
.......................................................................................................................................GCC---AGAGAGCGCGA---------------------------------------GCGGA............................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTA.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................GT----------------------------------------------GGCCGTATCGGTGT--GCGGCA...........................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................AGGGCC---AGAGAGCGCGA---------------------------------------GCGGA............................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................T--GCGGCAGCTAGAAAGTGTGGC--..........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATCACACTCCGGTCGTTTA..........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGA............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................CAGGGCC---AGAGAGCGCGA---------------------------------------GCG..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................GACATCACACTCCGGTCGT.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA-----AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGC..............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................AGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATATC......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................A-TCCGAAA--ACCCACACTCG------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGC............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................GAATATAGAAA-TCCGAAA--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAG......1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................AGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAAT.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CAGCTAGAAAGTGTGGC--CAA---A...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GGCC---AGAGAGCGCGA---------------------------------------GCGGAA...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................AAGT----------------------------------------------GGCCGTATCGGTGT--.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAAT.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AAAGT----------------------------------------------GGCCGTATCGGTGT--GC...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................GAAAGTGTGGC--CAA---AAGTGACATC..........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................TACTTAAA------------AAG----------------CTGAAA-----AAAGTGGAAG..............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................A------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GC...............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................AAAAAGT----------------------------------------------GGCCGTATCGGTGT--.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCG............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA-----AAAGTGGAAGTA------AAAAA.................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GACATCACACTCCGGTCGTT............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................T----------------------------------------------GGCCGTATCGGTGT--GCGGCA...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GT----------------------------------------------GGCCGTATCGGTGT--GCGG.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................CTAGAAAGTGTGGC--CAA---AAGTGAC.............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................ATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................GGCC---AGAGAGCGCGA---------------------------------------GCGGAAATA........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CC---AGAGAGCGCGA---------------------------------------GCGGAAATAC.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ACACTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGC.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................G-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGG.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GTTTAG--------------------------------------CAA-------------AAAAGCAGCAG........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CTCCGGTCGTTTAG--------------------------------------CAA-------------AAAAGT.............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................A------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCG..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................GAAA--ACCCACACTCG------------------------------CA--CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAA...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................A------------AAG----------------CTGAAA-----AAAGTGGAAGT.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CC---AGAGAGCGCGA---------------------------------------GCGGAAATACT......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................GGCCGTATCGGTGT--GCGGC............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CAAACA--CTAG-------------CGCAGGGCC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AG----------------CTGAAA-----AAAGTGGAAGT.............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCACCAAC...............................................................................................2450.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAGCACCAAC...............................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACCAACAG--CAGC--------------------------AGCA-----------------------------------G.....................2190.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000020000000000000000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAGCACCA.................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCAACAG--CAGC--------------------------AGCA-----------------------------------G.....................2090.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCACCAACAG--CAGC--------------------------AG...........................................................21100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAG......................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAGCAGCAG.........................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAGC.....................................................................................................22200.1530000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCACC..................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCACCAACAG--CAGC--------------------------.............................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCAGCAGCAACAGC.................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCACCAACA..............................................................................................19160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCACCAACAG--CAGC--------------------------.............................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCAACAG--CAGC--------------------------AGCA-----------------------------------......................19190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCACCAACAG--CAGC--------------------------A............................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAGCA.......................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAGC........................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCAGCA....................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAACAG--CAGC--------------------------AGCA-----------------------------------G.....................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCACCAACAG--CA.........................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG--CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG------------------------------CACACACACATACCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA----AAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGCAGCAACAGCAG---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................AGTGACATCACACTCCGGTCG..............................................................................................................................................................................................2111.0011000000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGG.............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................................................................................................................................................................................................................................CGTATCGGTGT--GCGGCAGCTAGA.....................................................................................................................................................................................................................................2311.0010000100
..........................................ATAGAAA-TCCGAAA--ACCCACACTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
................................................................................................................................................................................................................................................................................................................................................................................GACATCACACTCCGGTCGGTT...........................................................................................................................................................................................2111.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................ACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAA................................................................................................................................2311.0010000100
....................................................................................................................................AGGGCC---AGAGAGCGCGA---------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................GCTAGAAAGTGTGGC--CAA---AAGT................................................................................................................................................................................................................2211.0010000100
.................................................................................................................................................................................................................................................................GTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GC...............................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................................................................................................................................................................................................................................................GCAGCTAGAAAGTGTGGC--CAA---AA..................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................................................................................................................................................AAGT----------------------------------------------GGCCGTATCGGTGT--GC...............................................................................................................................................................................................................................................2011.0010001000
..................................................................................................................AG-------------CGCAGGGCC---AGAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
........................................................................................................CACACATACCAG-------------CGCAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...............................................................ACACTCG------------------------------CACACACACATACCAG-------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................TAG--------------------------------------CAA-------------AAAAGCAGCAACAGC....................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAG......2211.0010000100
............................................................................................................................................................................................................AA------------AAG----------------CTGAAA----AAAAGTGGA................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................ACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGC.............................................................................................................................2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAG---------CAG-----------CAGC--------------------------.............................................................20200.1531000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........22200.0510100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG---------CAG-----------CAGC--------------------------A............................................................19200.0510001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........18200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG---------CAG-----------CAGC--------------------------A............................................................20200.0510010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------CAG-----------CAGC--------------------------AGCA-----------------------------------GG-----AG-C...........20200.0510000010
droYak3
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACACG-------------CAC----ACA-------CACACACACA--CCAG-------------CGCAGGGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTGAAA-CAAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGCAGCAGCAGCAG---------CAGCAACAGCAA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................GACATCACACTCCGGTCGGTTAG--------------------------------------C..................................................................................................................................................2412.00201100000000
..............................................AAA-TCCGAAA--ACCCACACACG-------------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................................AAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCG............................................................................................................................................................................................................................................................2311.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAGCAT---2011.00100000010000
...............................................................................................................................................................................................................................................................................GT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCT........................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................GCTAGAAAGTGTGGC--CAA---AAGTGACAT...........................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................TAGAAAGTGTGGC--CAA---AAGT................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................ACACTCCGGTCGGTTAG--------------------------------------CAA-------------AAAAGCA............................................................................................................................2711.00101000000000
.........................................................................................................................................C---AGAGAGCGCGA---------------------------------------GCGGAAAT.........................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................GT----------------------------------------------GGCCGTATCGGTGT--GCGGCA...........................................................................................................................................................................................................................................2211.00100000010000
............................................AGAAA-TCCGAAA--ACCCACACACG-------------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................GTGTGGC--CAA---AAGTGACATC..........................................................................................................................................................................................................2011.00101000000000
.......................................................................................................................................................................................................................................................AAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGC..............................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................GCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CT.................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
....................................................................................................................................................GCGA---------------------------------------GCGGAAATACTTAAA------------......................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.................................AAATTGAATATAGAAA-TCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................AGAAAGTGTGGC--CAA---AAGT................................................................................................................................................................................................................1911.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CTAAAG......2011.00100000010000
..................................................................................................................................GCAGGGCC---AGAGAGCGCGA---------------------------------------GC...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................ATAGAAA-TCCGAAA--ACCCACACACG-------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CAGCAACAGCAA--CAGC--------------------------AGCA-----------------------------------GG-----...............2320.50101000000000
..........................................................................................ACA-------CACACACACA--CCAG-------------CGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA--CAGC--------------------------AGCA-----------------------------------GG-----AG-CT..........1920.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAG---------CAGCAACAGC...............................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAG---------CAGCAACAGC...............................................................................................23200.05101000000000
droEug1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCA-------------CAC----TCG-------CACACACACA--CAAA-------------CGCAGGGCCG-CAGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTTAA------AAAGTGGAAGTAAAA--TAAAAATT----------------------------------------------GGCCGTATCGGTGT--GCGGCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGTT-------C----------------------------------------------------------------------------------------------AG-----------------------------CG-----------------------------------AAAAAGGAG-CAAACGTTT---SizeHit CountTotal NormTotal
No Reads
droBia1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-ACCGAAA-AACCCACACTCG-------------CAC----ACGCTGGCAGCGCACACACA--CTGA-------------CG-AGAGCC---AGAGAGCGCGA---------------------------------------GCGGAAATACTTAACAAGCCAAAGCTAAAGCTAAAACGTC--------------GAAAAAGTGGAAGTA------A-AAAGT----------------------------------------------GGCCGTGTCGGTGCGAGCGGCGTCTAGAAAGTGTGGC--CAACAAAAGTGACATCACACTCCGGC-------C----------------------------------------------------------------------------------------------AGCAGAAGGGCAGGAAAGT-------CAGCCAA-----------------------------------GG-----AGCCTAGGGTTT---SizeHit CountTotal NormTotal
No Reads
droTak1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCG-------------CAG----T---------CACACACATA--CGAG-------------CGCTGGGCG--AAGAGAGCGCGA---------------------------------------GCGGAAATACTTAAA------------AAG----------------CTAAAAGGCAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------GGCCGTATCGGTGTGAGCGGCATCTAGAAAGTGTGGC--CAA--AAAGTGACATCACACTCCGGG-------CAG-----------------------------------CAG-------------AAAAACAGCAGCAGGAG---------CAGGAACA--------T----------------------------ACG-----------------------------------AG-----AA-CTA-CGAAT---SizeHit CountTotal NormTotal
No Reads
droEle1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAAAAACCCACACTCA--CTCACCAAA--CAC--ACA---------CACACACACA--CGCG-------------CGCAGGGCCAAAAGAGAGCGCGAGCGAGG------------------------------CGAGCGGAAATACTTAAAAA---A------AAG----------------CTGAAAAGCAAAAAGTGGAAGTA------AAAAAGT----------------------------------------------G------------------GCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGC-------C----------------------------------------------------------------------------------------------AGA--------------------------AGCA-----------------------------------GG-----AG-CAAAA---TTGCSizeHit CountTotal NormTotal
No Reads
droRho1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGAAA--ACCCACACTCA-------------CTCACACA---------CACACTGACA--CACG-------------CGCAGGGCCAAAAGAGAGCGCGAGCGAG-------------------------------CAAGCGGAAATACTAAA-------------AAG----------------CTAAAAAGC--AAAGTGGAAGTA------AAAAAGT----------------------------------------------G------------------GCAGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGA-------C----------------------------------------------------------------------------------------------CGC--------------------------AGCA-----------------------------------GG-----AG-CTAAA---TTGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TCCGACA-AACCCAC--TCGCACACA---CACACAC----TCG-------CA--CACACA--CAAA-----CA----CACACAGGGCCA-CAGAGAGCGCGA---------------------------------------GCGGAAATACTAAAA------------C-G--------TTAAAAAGCTTG-------AAAGTGGAAGTAGAAACAAAAAATT----------------------------------------------GGCCGA-----------------GTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGG-------C-----------------------------------------------------------AGCAAAATCAG---------C---------------GC--------A------TCAGGAGCAAGCCAA----------------------------AAAAAAAAA-----------AA---TTACSizeHit CountTotal NormTotal
No Reads
droKik1
TAAATAAA-AAATCTATA-------TATATTTTAAATTGAATTTAGAAA-AGCGAAC--GCACACAC----------------------------------------ACT--CGAG----------------AGAGCG---AGAGCGCGCG---------------------------GCAAAAGCTTGCAGCGGAAATACTGAAA------------G-G------------------------C--AAAGTGGAAGTA------A--AAGT----------------------------------------------GCCTGTGTCTGTGT--GCGGCCGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGG------G--------------------------------------CAG-------------CAGAGCTGCGATAGCAG---------GAGTAACAGGAGTACATC--------------------------AGCG-----------------------------------AG-----AA-ATCGCGCGC---SizeHit CountTotal NormTotal
No Reads
droAna3
AAAATAAA-AAAGCTATA-------TATATTTTAAATTCAATATAGAAA-TCCGAAA--ACATACAAACG------------------------------TACGTAC------------------------------------GGAGCG-GACCGAGC-------CGAAAGCCAAAAGCCAAAAGCTTGCAGCGGAAATACTCAAA------------G-G------------------------C--AAAGTGGAAGTA------AAA-AGTATC------TGTGCGTTTGTGTGCGC--------------------GGCTGCATTGGTGT--GCGGTTGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGCA--------GAGTCGCCTTTTGGGGA--AGCATCGTCGCAGTTCCCATT---TCGCATTTCGCATTTATCA------------------------GGAG--CACG--------------------------GGTACGGGCTCGAATACACGTACAACGTGCGAAGAAAC-AG-----AG-CCAGCGCAG---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................CGTAC------------------------------------GGAGCG-GACCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................................GT--GCGGTTGCTAGAAAGTGT...............................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................TC------TGTGCGTTTGTGTGCGC--------------------G................................................................................................................................................................................................................................................................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCATTTATCA------------------------GGAG--CACG--------------------------GGT..........................................................2411.001000001
..................................................................................................................................................GCG-GACCGAGC-------CGAAAGCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................................................................................................................................................................................................................................CTGCATTGGTGT--GCGGTTGCTA.......................................................................................................................................................................................................................................2211.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGGCTCGAATACACGTACAACGT.................................2511.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GGAG--CACG--------------------------GGTACGGGCT...................................................2011.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--CACG--------------------------GGTACGGGCTCGAATACAC..........................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGCATTTATCA------------------------GGAG--CACG--------------------------GGT..........................................................2611.001010000
.......................................................................................................GTAC------------------------------------GGAGCG-GACCGAGC-------C..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GA--AGCATCGTCGCAGTTCCCATT---T...........................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGAAGAAAC-AG-----AG-CCAGC.......2511.001000010
................................................................................................................................................................................................................................................................................................................................................................................GACATCACACTCCGGCA--------GAGC...................................................................................................................................................................................2111.001010000
....................................................................................................................................................G-GACCGAGC-------CGAAAGCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATT---TCGCATTTCGC.................................................................................................................................2011.001010000
........................................................................................................TAC------------------------------------GGAGCG-GACCGAGC-------CGAAAGCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................GTA------AAA-AGTATC------TGTGCGTTTGT...........................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................GTAC------------------------------------GGAGCG-GACCGAGC-------...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTACAACGTGCGAAGAAAC-AG-----AG-C...........2811.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGAAAC-AG-----AG-CCAGCGC.....2111.001000010
................................................................................................................................................................................AGCCAAAAGCTTGCAGCGGA............................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GGAG--CACG--------------------------GGTACGGGCTCGAATA.............................................2611.001000001
..........................................ATAGAAA-TCCGAAA--ACATACAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................ACTCCGGCA--------GAGTCGCCTTTTGGGGA--....................................................................................................................................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GA--AGCATCGTCGCAGTTCCCATT---TCGC........................................................................................................................................2711.001000010
.......................................................................................................GTAC------------------------------------GGAGCG-GACCGAGC-------CGAAAGCC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGA--AGCATCGTCGCAGTTCCC..................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................AGTCGCCTTTTGGGGA--AGCATCGTCGCA........................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................................A------AAA-AGTATC------TGTGCGTTTGTGTGCGC--------------------.................................................................................................................................................................................................................................................................2711.001010000
droBip1
AAAATAAA-AAAGCTATA-------TATATTTTAAATTCAATATAGAAA-TCCGAAA--ACATACAAACG------------------------------TGC----------------------------------------AGAGCG-GACCGAGC-------CGAA-------AGCCAAAAGCTTGCAGCGGAAATACTCAAA------------G-G------------------------C--AAAGTGGAAGTA------AAA-AGTATC------TGTGAGTTTGTGTGCGC--------------------GACTGCATTGGTGT--GCGGTTGCTAGAAAGTGTGGC--CAA---AAGTGACATCACACTCCGGCA--------GAGTCGCCTTTTGGGGA--AGCATCGTCGCAGTTCGCAGT---TCGCATTTCGCATTTA------------------------TCAGGAG--CACG--------------------------GGTA-----------------------------------CG-----AG-CTCGAATAC---SizeHit CountTotal NormTotal
No Reads
dp5
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TACAAAA--GCACACACACG------------------------------G------------TAG-------------A-------------GGAGTG-GAAG-------------G-------GAGACAAAAGATTGCAGCGGAAATACTAAAA------------AAG----------------CAAAAA-GCGAAAAGTGGAAGTGGA----AAAAAGTGTC------TG--CTTTTGTGTGTG------------------------------TGTGT--TTGTGTGTTAGAAAGTGTGGC--CAG---AAGTGACATCACACCCAGAG---------AAGGCGACGCGGGGACAAGAGCATCAGAGTGATTAGCAGGAGCCAGCCGTCGAGAAGTATCAGCAGGAG---------AAGCGCCCACAA--AAGC--------------------------GGCG-----------------------------------AA-----AA-TTAACGCGC---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGCCAGCCGTCGAG.................................................................................................................................1812.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG---------AAGCGCCCACAA--AAGC--------------------------GGC..........................................................2211.0010010000000
.................................................................................................................................................................................................................................................................................................TTGTGTGTG------------------------------TGTGT--TTGTGTGTTA.......................................................................................................................................................................................................................................2411.0010000001000
..................................................................................................................................................GTG-GAAG-------------G-------GAGACAAAAGATTGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................ACATCACACCCAGAG---------AAGGCGACGC.............................................................................................................................................................................2511.0010100000000
...................................................................................................................G-------------A-------------GGAGTG-GAAG-------------G-------GAGAC............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAGAGTGATTAGCAGG...............................................................................................................................................2111.0010100000000
................................................A-TACAAAA--GCACACACACG------------------------------G------------TAG-------------A-------------GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGAGCATCAGAGTGAA......................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACAAGAGCATCAGAGT.........................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................GAAAGTGTGGC--CAG---AAGTGACAT...........................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGGAG---------AAGCGCCCACAA--A..........................................................................................2211.0010100000000
............................................AGAAA-TACAAAA--GCACACACACG------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................................................AAA--GCACACACACG------------------------------G------------TAG-------------A-------------GGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
...........................................................................................................................................................................................................................AG----------------CAAAAA-GCGAAAAGTG..................................................................................................................................................................................................................................................................................................................................1820.5010100000000
droPer2
AAAATAAA-AAATCTATA-------TATATTTTAAATTGAATATAGAAA-TACAAAA--GCACACACACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------GAGACAAAAGATTGCAGCGGAAATACTAAAA------------AAG----------------CAAAAA-GCGAAAAGTGGAAGTGGA----AAAAAGTGTC------TG--CTTTTGTGTGTG------------------------------TGTGT--TTGTGTGTTAGAAAGTGTGGC--CAG---AAGTGACATCACACCCGGAG---------AAGGCGACGCGGGGACAAGAGCATCAGAGCGATTAGCAGGAGCCAGCCGTTGAGAAGTATCAGCAGGAG---------AAGCGCCCACAA--AAGC--------------------------GGCG-----------------------------------AA-----AA-TTAACGCGC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAG---------AAGCGCCCACAA--AAGC--------------------------GGC..........................................................2413.003300000
...........................................................................................................................................................................................................................................................................................G--CTTTTGTGTGTG------------------------------TGTGT--T................................................................................................................................................................................................................................................1912.002000002
.................................................................................................................................................................................GACAAAAGATTGCAGCGGA............................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGAGCATCAGAGCGATTAGCA.................................................................................................................................................2512.002000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATCAGCAGGAG---------AAGC.....................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................GAAAGTGTGGC--CAG---AAGT................................................................................................................................................................................................................1811.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGCAGGAGCCAGCCGTT....................................................................................................................................2111.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAGCCAGCCGTTGAG.................................................................................................................................2011.001010000
...................................................................ACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------GAG..............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................CACACG------------------------------G------------GAG-------------A-------------GGAGTG-GAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--AAGC--------------------------GGCG-----------------------------------AA-----AA-TTAAC.......2011.001010000
.................................................................................................................................................................................................................................................................................................TTGTGTGTG------------------------------TGTGT--TTGTGTGTT........................................................................................................................................................................................................................................2311.001000001
................................................................................................................................................................................................................................................................................................TTTGTGTGTG------------------------------TGTGT--TTGTGTGTT........................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................................................................................AAAA-GCGAAAAGTGGAAGT.............................................................................................................................................................................................................................................................................................................................1911.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCGATTAGCAGGAGCCAGCCGTT....................................................................................................................................2711.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCAGGAGCCAGCCGTTGA..................................................................................................................................2211.001010000
....................................................................CG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------GA...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................................CACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------G................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................................................................CACG------------------------------G------------GAG-------------A-------------GGAGTG-GAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGACAAGAGCATCAGAGCG........................................................................................................................................................1911.001010000
..................................................................CACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------G-------GAG..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATCAGCAGGAG---------AAGCGC...................................................................................................2111.001100000
...................................................ACAAAA--GCACACACACG------------------------------G------------GAG-------------A-------------GGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGGAGCCAGCCGTTG...................................................................................................................................1911.001000010
................................................................CACACG------------------------------G------------GAG-------------A-------------GGAGTG-GAAG-------------.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droWil2
AAAATAAAAAAATCTATA-------TATAT-TTAAATTGAATAA-AAAA-TCAAAAA--AAATAAATACC-----------AACGT----TCG-------CC--TAGAGA--GTCA-------------CACAGAGAG---AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................AGA--GTCA-------------CACAGAGAG---AGAGAGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200002
............................................................................................G-------CC--TAGAGA--GTCA-------------CACAGAGAG---AGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
....................................................................................GT----TCG-------CC--TAGAGA--GTCA-------------CACAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...........................................................................................CG-------CC--TAGAGA--GTCA-------------CACAGAGAG---AGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.................................................................................AACGT----TCG-------CC--TAGAGA--GTCA-------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........................................................................................................................................AG---AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2531.00300003
...........................................................................................CG-------CC--TAGAGA--GTCA-------------CACAGAGAG---...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.....................................................................................T----TCG-------CC--TAGAGA--GTCA-------------CACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................................GAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2030.33100100
.............................................................................................................................................AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2330.33100010
.........................................................................................................................................G---AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGG.............................................................................................................................................................................................................................................2250.20100100
................................................................................................................GTCA-------------CACAGAGAG---AGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20100010
.............................................................................................................................................AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGG.............................................................................................................................................................................................................................................2160.17100100
....................................................................................................................................AGAGAG---AGAGAGAGAGA---------------------------------------GA----------------------------------------------------------------------------------------------------------------------------------------GTGT--GTG..............................................................................................................................................................................................................................................26200.05101000
droVir3
AAAATATTTTTATCTATAGGTGTTGTATAT-TTAAATTGAATATATAAA-TACAAAG--CATCACAC-CG------------------------------CGCACACATA--ACAGAAGGAGAGATCGAAACAGAGAA---AGAGAGAGAGA----------GAGAGAG-------ACCTTAAAGCGGCCAACGGAAGTACGTAAA------------A-G----------------C---------------------A------AAA-AGTATCG-AGAGTG--CATTCGTGTGCGTGTGCT-----GAACAGCT---GCC------------GTGGCTGTTAGAAAGTGTAGC--CAA--AGAGTGACATCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................GTGTGCGTGTGCT-----GAACA......................................................................................................................................................................................................................................................................1812.002200000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GAGAGATCGAAACAGAGAA---AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.....ATTTTTATCTATAGGTGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TTAGAAAGTGTAGC--CAA--AGA..................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................ATATATAAA-TACAAAG--CATCACAC-CG------------------------------CGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CGTGTGCGTGTGCT-----GAACAG.....................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................AGTACGTAAA------------A-G----------------C---------------------A------AAA-AGTATCG-A.........................................................................................................................................................................................................................................................................................................2511.001000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCGTGTGCGTGTGCT-----GAACA......................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................ACAGAAGGAGAGATCGAAACAGAGAA---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................T---GCC------------GTGGCTGTTAGAAAGTGTA..............................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ACATA--ACAGAAGGAGAGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................AAAGTGTAGC--CAA--AGAGTGACA............................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................GTGCT-----GAACAGCT---GCC------------GTGGC............................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTGGCTGTTAGAAAGTGTAGC--..........................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGGCCAACGGAAGTACGT.....................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................TGTGCGTGTGCT-----GAACAGCC---................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AGTG--CATTCGTGTGCGTGTGC.................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................G-------ACCTTAAAGCGGCCAACGGAAGTAC.......................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GTTAGAAAGTGTAGC--CAA--A....................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.AAATATTTTTATCTATAGGTGTTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................A--ACAGAAGGAGAGATCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
................................................................CAC-CG------------------------------CGCACACATA--ACAGAAGGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................ACACATA--ACAGAAGGAGAGATCGAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TCG-AGAGTG--CATTCGTGTGCG......................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................CATA--ACAGAAGGAGAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCC------------GTGGCTGTTAGAAAG..................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CTTAAAGCGGCCAACGGAAGT.........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CG-AGAGTG--CATTCGTGTGCGTGTGC.................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................AGAGATCGAAACAGAGAA---AGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CT-----GAACAGCT---GCC------------GTGGCTGG.........................................................................................................................................................................................................................................2120.501100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAGAGAA---AGAGAGAGAGA----------GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ACAGAGAA---AGAGAGAGAGA----------GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000010000000000000000000000000000000000000000000000000000
droMoj3
GAAATCAA-AAACTTTTG-------T---TTCTAAAACTCATGTTGAAA-TCCGCAC--ACGTTCACACA-------------CAC----A---------CGCACACACA--CAAG-------------CACACGCAC---TAGAAGCTTGT---------------------------------------GGGTGAAT--TTTGG------------ATT----------------TTGGAA------AAGTGTTGCCAG-C--CAACAACA-AAG-A----------------------------------------GAC-------ACAT--GCTGCAGCTATAATA---------------------------------------------------------------------------------A-------------GTATGCAGCAGCAGCAG---------CA---GCGGCAG--CAGC--------------------------AGCA-----------------------------------GC-----AG-CAGCAGCAG---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---------CA---GCGGCAG--CA.........................................................................................19200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG---------CA---GCGGCAG--C..........................................................................................21200.051100000
droGri2
AAAATAATTTTATCTATAGGTTTTGTATAT-TTAAATTGAATATATAAAATACAAAGCAG--CACACACC----G---AAA--CAC--ACA---------CACACACAGA--GAAA-----CA----CATAGAAAAAG---AGAGAGAGCGA----GGGGCAGAGAGAG-------AGCT-TGAGCTTCTAACGGAAATACGTAAA------------A-G----------------CCAAAA-AC--AAA---CAACAA------AAAAACTGTCGGAGAGTG--CATCCGTGTGCGTGCGCTGAGCTGAGCAGCTGCCGCC------------GTCGCTGTTAGAAAGTGTAGCGCCAA--AGAGTGACATCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................TGTTAGAAAGTGTAGCGCCAA--A....................................................................................................................................................................................................................2211.00101
............................................................................................................................................................................................................................................................................................................................................................AGTGTAGCGCCAA--AGAGTGACAG...........................................................................................................................................................................................................2311.00101

Generated: 05/17/2015 at 10:04 PM