ID:

dse_332

 Coordinate:

scaffold_0:15993641-15993696 -

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

5pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

utr5 [utr5_plus_10126]

No Repeatable elements found

Sense Strand Reads

TACAACAACGAAGAATACCAGAAGAAGCAAAGCCAAAAACGCAGCTGCAGTCGACGTCGACGCAGTGTTCGCTGCTGCCACCGCTGCTGCACTCGCCGACGTCAGTTTCTGTTTGGCCCATTGCCGTTGGCCAGCTTCAGTGTTCATTTCCCCATC

***********************************........(((((((..(((((((.((.(((((..((.((.......)).)).))))))).))))))).....))))..)))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 V115

head

 M054

female body

 V114

embryo
....................................................................................TGCTGCACTCGCCGACGTCAG................................................... 21 0 1 149.00 149 69 60 17 3
..................................................TCGACGTCGACGCAGTGTTCG..................................................................................... 21 0 1 63.00 63 40 6 16 1
..................................................TCGACGTCGACGCAGTGTTCGA.................................................................................... 22 1 1 47.00 47 47 0 0 0
..................................................TCGACGTCGACGCAGTGTTCGC.................................................................................... 22 0 1 46.00 46 31 4 10 1
..................................................TCGACGTCGACGCAGTGTTCGCT................................................................................... 23 0 1 36.00 36 23 3 10 0
..................................................TCGACGTCGACGCAGTGTTCGCTG.................................................................................. 24 0 1 29.00 29 19 6 3 1
....................................................................................TGCTGCACTCGCCGACGTCAGT.................................................. 22 0 1 27.00 27 12 7 7 1
....................................................................................TGCTGCACTCGCCGACGTCA.................................................... 20 0 2 17.00 34 18 5 11 0
...................................................CGACGTCGACGCAGTGTTCGCTGC................................................................................. 24 0 1 13.00 13 9 1 2 1
...................................................CGACGTCGACGCAGTGTTCG..................................................................................... 20 0 1 12.00 12 8 1 3 0
....................................................................................TGCTGCACTCGCCGACGTCAGA.................................................. 22 1 2 8.50 17 8 6 3 0
..................................................TCGACGTCGACGCAGTGTTCGCTGA................................................................................. 25 1 1 8.00 8 4 1 3 0
..................................................TCGACGTCGACGCAGTGTTC...................................................................................... 20 0 1 8.00 8 8 0 0 0
...................................................CGACGTCGACGCAGTGTTCGCT................................................................................... 22 0 1 6.00 6 4 1 0 1
...................................................CGACGTCGACGCAGTGTTCGA.................................................................................... 21 1 1 6.00 6 5 0 1 0
...................................................CGACGTCGACGCAGTGTTCGC.................................................................................... 21 0 1 5.00 5 3 1 1 0
..................................................TCGACGTCGACGCAGTGTTCGT.................................................................................... 22 1 1 3.00 3 3 0 0 0
..................................................TCGACGTCGACGCAGTGTTCGCTGT................................................................................. 25 1 1 3.00 3 2 1 0 0
..................................................TCGACGTCGACGCAGTGTTCGCTGAAA............................................................................... 27 3 1 2.00 2 0 0 2 0
...................................................................................CTGCTGCACTCGCCGACGTCA.................................................... 21 0 1 2.00 2 0 1 1 0
....................................................................................TGCTGCACTCGCCGACGTAAG................................................... 21 1 1 2.00 2 1 1 0 0
....................................................................................TTCTGCACTCGCCGACGTCAG................................................... 21 1 1 2.00 2 1 1 0 0
...................................................CGACGTCGACGCAGTGTTC...................................................................................... 19 0 1 2.00 2 0 0 2 0
..................................................TCGACGTCGACGCAGTGTTCGCTAT................................................................................. 25 2 1 1.00 1 0 0 1 0
..................................................TCGACGTTGACGCAGTGTTCGCTG.................................................................................. 24 1 1 1.00 1 0 0 1 0
....................................................GACGTCGACGCAGTGTTCGCTGA................................................................................. 23 1 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTGTTCGCTGAAT............................................................................... 27 3 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTGTTCGCTGCT................................................................................ 26 0 1 1.00 1 0 1 0 0
...................................................CGACGTCGACGCAGTGTTCGCTGA................................................................................. 24 1 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTTTTCGCTG.................................................................................. 24 1 1 1.00 1 0 1 0 0
...................................................CGACGTCGACGCAGTGTTCGCTG.................................................................................. 23 0 1 1.00 1 0 1 0 0
..................................................TCGACGTCGACGCAGTGTTCGCCG.................................................................................. 24 1 1 1.00 1 1 0 0 0
..................................................TGGACGTCGACGCAGTGTTCGC.................................................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................ACGTCGACGCAGTGTTCG..................................................................................... 18 0 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCAGTGTTCGCTGAA................................................................................ 26 2 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCAGTGTTCAC.................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TCGACGGCGACGCAGTGTTCGC.................................................................................... 22 1 1 1.00 1 1 0 0 0
....................................................GACGTCGACGCAGTGTTCGC.................................................................................... 20 0 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTGTT....................................................................................... 19 0 1 1.00 1 1 0 0 0
..............ATACCAGAAGAAGCAAAGC........................................................................................................................... 19 0 1 1.00 1 0 0 0 1
........................................................................................................................TTGCCGTTGGCCAGCTTCAGTGT............. 23 0 1 1.00 1 0 1 0 0
..................................................TCGACGTCGACGCAGTGTACGA.................................................................................... 22 2 1 1.00 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACTTCAGT.................................................. 22 1 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCAGTGTTCAA.................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTGTCCG..................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTGTTCTCTGA................................................................................. 25 2 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCAGTGTACGCTG.................................................................................. 24 1 1 1.00 1 1 0 0 0
.....................................................................................TCTGCACTCGCCGACGTCAG................................................... 20 1 1 1.00 1 0 1 0 0
..................................................TCGACGTCGACGCAGTGTCCGA.................................................................................... 22 2 1 1.00 1 1 0 0 0
...................................................CGACGTCGACGCAGTGTTCGCTGT................................................................................. 24 1 1 1.00 1 1 0 0 0
.....................................................................................GCTGCACTCGCCGACGTCA.................................................... 19 0 2 1.00 2 0 0 2 0
....................................................................................TGCTGCACTCGCCGACATCAG................................................... 21 1 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCAGTGTCCGCTGA................................................................................. 25 2 1 1.00 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACGTCAGTT................................................. 23 0 1 1.00 1 0 1 0 0
....................................................................................TGCTGCACTCGCCGCCGTCAG................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TCGACGCCGACGCAGTGTTCGA.................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGCGTTCG..................................................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................ACGTCGACGCAGTGTTCGCTG.................................................................................. 21 0 1 1.00 1 1 0 0 0
..................................................TCGCCGTCGACGCAGTGTTCG..................................................................................... 21 1 1 1.00 1 0 0 1 0
....................................................................................TGCCGCACTCGCCGACGTCAG................................................... 21 1 1 1.00 1 1 0 0 0
..............................................GCAGTCGACGTCGACGCAGCGTTCGCTG.................................................................................. 28 1 1 1.00 1 1 0 0 0
..................................................TCGACGTTGACGCAGTGTTCGCTGA................................................................................. 25 2 1 1.00 1 0 1 0 0
..................................................TGGACGTCGACGCAGTGTTCGCTGA................................................................................. 25 2 1 1.00 1 0 0 1 0
.....................................................................................GCTGCACTCGCCGACGTCAG................................................... 20 0 1 1.00 1 0 1 0 0
...................................................CGACGTCGACGCAGTGTTCA..................................................................................... 20 1 1 1.00 1 0 1 0 0
..................................................TCGACGTCGACGCAGTGTTCGCTGCTGA.............................................................................. 28 1 1 1.00 1 1 0 0 0
.....................................................ACGTCGACGCAGTGTTCGCTGC................................................................................. 22 0 1 1.00 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACGTTAG................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGGGTTCGCTGA................................................................................. 25 2 1 1.00 1 0 0 1 0
....................................................GACGTCGACCCAGTGTTCGCT................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGTATTCGCTG.................................................................................. 24 1 1 1.00 1 1 0 0 0
.....................................................................................GCTGCACTCGCCGACGTCAGTTT................................................ 23 0 1 1.00 1 0 0 1 0
..................................................TCGACGTCGACGCCGTGTTCGA.................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TCGACGTCGACGCAGCGTTT...................................................................................... 20 2 2 0.50 1 1 0 0 0
.....................................................................................GCTGCACTCGCCGACGTCAC................................................... 20 1 2 0.50 1 0 0 1 0
....................................................................................TGCTGCACTCGCCGACGTCAT................................................... 21 1 2 0.50 1 0 1 0 0
....................................................................................TGTTGCACTCGCCGACGTCAGA.................................................. 22 2 2 0.50 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACGTC..................................................... 19 0 2 0.50 1 0 0 1 0
...................................................CGACGTCGACGCAGTGTTCGCTGCAAT.............................................................................. 27 3 2 0.50 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACGTT..................................................... 19 1 2 0.50 1 0 0 1 0
....................................................................................TGCTGCACTCGCCGCCGTCA.................................................... 20 1 2 0.50 1 1 0 0 0
....................................................................................TGCTGCACTCGCCGACGTTA.................................................... 20 1 2 0.50 1 1 0 0 0
...................................AACACGCAGATGCAGTCG....................................................................................................... 18 2 9 0.11 1 0 0 0 1
......................................................................................................................................GTTCAGAGTTCATTTCCC.... 18 2 14 0.07 1 0 0 1 0
...............................................CAGTCGAGGTAGACGCAGAG......................................................................................... 20 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

ATGTTGTTGCTTCTTATGGTCTTCTTCGTTTCGGTTTTTGCGTCGACGTCAGCTGCAGCTGCGTCACAAGCGACGACGGTGGCGACGACGTGAGCGGCTGCAGTCAAAGACAAACCGGGTAACGGCAACCGGTCGAAGTCACAAGTAAAGGGGTAG

************************************........(((((((..(((((((.((.(((((..((.((.......)).)).))))))).))))))).....))))..)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:15993591-15993746 - dse_332 confident TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CTGCCACCGCTGCTG-------------------------------CACTCGCCGACGTCAGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droSim2 3r:15128612-15128767 - dsi_31064 confident TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CTGCCACCGCTGCTG-------------------------------CACTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
dm3 chr3R:5919793-5919948 + dme_374 confident TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--CTGCCATCGCTGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droEre2 scaffold_4770:15680309-15680468 - TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GTAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GGT---TTCGCT------GCT------------------GG------------CTGCCACCGCTGCTG-------------------------------CATTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droYak3 3R:9967332-9967502 + dya_1810 TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCTACTGCTGCTGC--TG------CT------------GCCGTTG-----------CTG--CTGCCACCGCTGCTG-------------------------------CATTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droEug1 scf7180000409470:253058-253207 + TACAACAACGAACA------------------------------------------TAACGAA--CAAGAA-GAAGTAAAGCC-AAAAGAA------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------CCA-----------------------------GCTGCTCGCTGCAATCGCCGACATTCGTTT--------CTGT-TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droBia1 scf7180000302402:3416377-3416522 + TGCAACAACT--------------------------------------------------------------GAAGAAAGGCCGAAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------GGCTGGCGTCGCCGCC-----GCC---GTCGCT---------------------GCCG----------------CTGCCGCCGCCACTG-------------------------------CACTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--G------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droTak1 scf7180000415245:186298-186440 - TACAACAACGGCGA----------------------------A-------------AG-------GCAGAACGAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGCCGTCGACGTC-----G---------------CCG-------------------------------------------TCGCTG-------------------------------CACTTGGCGACGTCCGTTT--------TTCAGTTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droEle1 scf7180000490967:810859-810987 - AACGGCAACGGCGA----------------------------A-------------GG-------C------AAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTTCCCATC
droRho1 scf7180000779228:19012-19152 + TACAACGGCAACG------------------------------GC---AACAAAGG-C-------AAAGGC-AAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTTCCCATC
droFic1 scf7180000454104:908495-908614 - A----CGACGAA-------------------------------------------------------------AAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAATCGCCGACGCTCGTTT--------CTGTGTTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATC
droKik1 scf7180000302706:2172506-2172687 + AACGAAAAAGAACG---CCAAAC--------------------GC---CACAAAAG-A-CGAAAGAAAGAA-------AAAAA-AAA---A------------------ACGGAAACGCAAAGCAAC-----------------------GCAACTGCAGTC-----------------------------CGGCGCTGCAGTCGACGTCG--------------------------CTG-------------------------------------CCCTCGCCTCTG-------------------------------C---CGCCGAC------TG--------ATG--TTGGCCGAATGCC-------------TTTTT------AG-CCAGCTTCATCGTCAGTGTTCATTTCCCCATC
droAna3 scaffold_13340:6482804-6483012 + dan_4066 TACAATAACC--GA----------------------------A-------------GC-------CAAGAA-GAA--AACGCC-AAA---A------------------A----------------C-AAACTGCAGTC-TGCTGC-GTCGCTACTGCAGTCGTCGACGACGTCGATGTGGCTGCCGCTGCCACCGCT-----------------------------------------------GCTGTTGCCACTG-----------CTGCT--------GCTG---CTGCTGCTGCTGCAGAGCCTTCTGCT--------------GCTTTGGTTG--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCG------TCAGTGTTCATTTTCCCATC
droBip1 scf7180000396708:2366171-2366356 - ACAAAAAACCAAA------------------------------GC---CA------TAACGAA--GAAGAA-GA--AAACGCC-AAA---A------------------A----------------C-AAACTGCAGTC-GGCTGC----GTCGCTGC------------------------------------------AGTCGACGACGCCGAC-----GTC---T--------------------------GCTG-----------CTACG--------GGTA---CTGCTGCCGCTGCAGCGCCTTCTGCT--------------GCTTTGGTTG--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCG------TCAGTGTTCATTTTCCCATC
dp5 2:5026844-5027016 - dps_117 candidate-rescued G----CAAC------------------------------------------------------------------GAAACGCC-AAA---A------------------A----------------C-ACGCTGCA-----------GTCGCTGCTGC------------------------------------------AGTCGACGCTGGCGTC-----G---------------TCGCCGTCGCCTTCTCTGCCG-----------CTGAC--------GCTG---CCGCTGACGATGTGAGGCCAGCCGCT-------------GGCTGCGGCCG--------CTG--TCGGCTGCTTGCCTGCA---------CC--C------GG-TCAGCG------TCAGTGTTCATTTCCCCATC
droPer2 scaffold_19:732306-732478 - dpe_2527 G----CAAC------------------------------------------------------------------GAAACGCC-AAA---A------------------A----------------C-ACGCTGCA-----------GTCGCTGCTGC------------------------------------------AGTCGACGCTGGCGTC-----G---------------TCGCCGTCGCCTTCTCTGCCG-----------CTGCC--------GCTG---ACGCTGACGATGTGAGGCCAGCCGCT-------------GGCTGCGGCCG--------CTG--TCGGCTGCTTGCCTGCA---------CC--C------GG-TCAGCG------TCAGTGTTCATTTCCCCATC
droWil2 scf2_1100000004902:11175879-11176107 - dwi_5427 TACAACAACAAAGAGAAATAAAAACTATAACAACAACATAACAAA-------------------------A-G---GAAAATA-AAAAGAAATGAAAAGAAAAACTT-AAAAACT----------GCACAGTTGCAGTCATGCTGCTGCCTCTGCTGC------------------------------------------AGTTGACGTCGACTTC-----GGTTGC--TGCT---GCT---------------GGTG----------------CTGGTGCTGCTGCTG-------------------------------CAGTTGCTGTTGGCGTTTTGGCAT--TTGGT-TTGG----------------------TC--T------GG-CCACAG------TCAGTGTTAATTTCCTCATC
droVir3 scaffold_12855:2693643-2693884 - dvi_106 confident TACAACAG-GAACA---ACACAAACAAGGACA--AACATAACAGC-------------------------A-GCAACAACAAC-AAC---AACAACGAGAACAACGAGAACAACA------------------GCA-----------ATTACCATTGCATTCGCAGTCGCTGTCGCTGT------CGCAGTCGCAGCTGCAGTTGACGTCGACAGC-----GCT---TGCGGCGCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCGTCTGCTT--------TCAG-CT------------GCAACGGCCAACGT--CGTCAGTCG-CCAGTC-----GTCAGTTTTAATTTCCACATC
droMoj3 scaffold_6540:11894807-11894992 - dmo_261 confident TGCGACAACAGCAA----------------------------C-----AACAAGAG---------CACGAC-GCAGAAGAACA-ACA---A-----------------AACGGCA----------------TTGCAGTCACGCT---------------------------GTCGCTGT------CGCTACCGCAGCTGCAGTCAGCGCTGGCAGC-----GCT------------GCC---------------TGTGCTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--TCAGCT--------GCAACGGCCAACGT--C------GG-CAGTCG------TCAGTTTTAATTTCCACATC
droGri2 scaffold_14624:2256841-2257057 + dgr_472 AACAACAACAACA------------------------------GCAGCAACAA---CA-------GCAGCA-GCAGCAGTAGC-AAC---A---------------AGAACTACA-----------------AGCA-----------GTCGCAGCTGC------------------------------------------AGTTGACGTCGGCAGC-----GCT---G---------TTTCTGTTGCGTTGGCTG----------ACAGCTGCT--------GCTG---CTGCTAGCTGCTTGCTGCTTGCCGCT-------------AGCTGCTTGGG-----CTGCAT--TCAGCT--------GCAACAGCCAACG----GGCAA-CGTCAGTCG------TCAGTTTTAATTTCCACATC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CTGCCACCGCTGCTG-------------------------------CACTCGCCGACGTCAGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCAG........................................................................................211149.001491769360
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCG.................................................................................................................................................................................................21163.0063164016
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGA................................................................................................................................................................................................22147.004704700
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGC................................................................................................................................................................................................22146.0046103114
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------.........................................................................................................................................................23136.0036102303
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--......................................................................................................................................................24129.002931916
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCAGT.......................................................................................22127.002771217
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCA.........................................................................................20217.0034111805
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--C.....................................................................................................................................................24113.00132911
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCG.................................................................................................................................................................................................20112.00123801
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCAGA.......................................................................................2228.50173806
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--A.....................................................................................................................................................2518.0083401
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTC..................................................................................................................................................................................................2018.0080800
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------.........................................................................................................................................................2216.0060411
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGA................................................................................................................................................................................................2116.0061500
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGC................................................................................................................................................................................................2115.0051301
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGT................................................................................................................................................................................................2213.0030300
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--T.....................................................................................................................................................2513.0030201
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--AAA...................................................................................................................................................2712.0022000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CACTCGCCGACGTCA.........................................................................................2112.0021001
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTC..................................................................................................................................................................................................1912.0022000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------A--T.....................................................................................................................................................2511.0011000
............................................................................................................................................................................................................GACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--A.....................................................................................................................................................2311.0010100
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--AAT...................................................................................................................................................2711.0010100
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CT....................................................................................................................................................2611.0010001
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--A.....................................................................................................................................................2411.0010100
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--......................................................................................................................................................2311.0010001
.............................................................................................................................................................................................................ACGTCGACGCA-----GTG---TTCG.................................................................................................................................................................................................1811.0011000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--AA....................................................................................................................................................2611.0011000
............................................................................................................................................................................................................GACGTCGACGCA-----GTG---TTCGC................................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TT...................................................................................................................................................................................................1911.0010100
..........................................A-------------TA-------CCAGAA-GAAGCAAAGC......................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................................................................................................................................................................................................................................................................................................................................................................TTGCC-------------GT--T------GG-CCAGCT------TCAGTGT.............2311.0010001
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCAA................................................................................................................................................................................................2211.0010100
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--T.....................................................................................................................................................2411.0010100
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CACTCGCCGACGTCA.........................................................................................1921.0022000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCAGTT......................................................................................2311.0010001
.............................................................................................................................................................................................................ACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--......................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CACTCGCCGACGTCAG........................................................................................2011.0010001
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCA.................................................................................................................................................................................................2011.0010001
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CTGA..................................................................................................................................................2811.0010100
.............................................................................................................................................................................................................ACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--C.....................................................................................................................................................2211.0010100
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CACTCGCCGACGTCAGTTT--------.............................................................................2311.0011000
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CACTCGCCGACGTCAC........................................................................................2020.5011000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCAT........................................................................................2120.5010001
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTC..........................................................................................1920.5011000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CAAT..................................................................................................................................................2720.5010100
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTT..........................................................................................1920.5011000
droSim2
TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--CTGCCACCGCTGCTG-------------------------------CACTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGC................................................................................................................................................................................................221139.001396176100010000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--......................................................................................................................................................241105.0010534581100011000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------.........................................................................................................................................................23149.00491431000031000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCCG........................................................................................21120.0020125110000000001000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCG.................................................................................................................................................................................................21112.001253020010000001000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGC................................................................................................................................................................................................21110.001064000000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCC--------------------------------------.........................................................................................................................................................2318.00834100000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--A.....................................................................................................................................................2518.00825000001000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCCGT.......................................................................................2217.00701000050000100000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTC..................................................................................................................................................................................................2017.00714010001000000000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------.........................................................................................................................................................2215.00522000001000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--G.....................................................................................................................................................2515.00523000000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--T.....................................................................................................................................................2514.00422000000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCG--------------------------------------.........................................................................................................................................................2314.00422000000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGT................................................................................................................................................................................................2213.00303000000000000000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCG.................................................................................................................................................................................................2013.00303000000000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CACTCGCCGACGTCC.........................................................................................2012.00201000100000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGG................................................................................................................................................................................................2211.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGACGTCCGTTT--------CTGT-TTGGCC..................................................................2211.00110000000000000000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--T.....................................................................................................................................................2411.00110000000000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---T....................................................................................................................................................................................................1811.00101000000000000000
...........................................................................................................................................................................................................CGACGTCGACGCA-----GTG---TTCGCC--------------------------------------.........................................................................................................................................................2211.00101000000000000000
.......................................................................................................................................................CAGCTGC------------------------------------------AGTCGACGTCGACG..................................................................................................................................................................................................................2121.00220000000000000000
...............................................................................................................................................................................................................................................................................................TG-------------------------------CACTCGCCGACGTCCG........................................................................................1811.00100000100000000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---TTCGCT--------------------------------------G--C.....................................................................................................................................................2511.00110000000000000000
....................................................................................AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACG..................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................T--------------------------------------G--CTGCCACCGCTGA.........................................................................................................................................15200.7014000000000014000000
......................................................................................................................................................................................................................................GCT--------------------------------------G--CTGCCACCGCTGA.........................................................................................................................................17130.46600000000006000000
..........................................................................................................................................................................................................TCGACGTCGACGCA-----GTG---G....................................................................................................................................................................................................1830.33101000000000000000
.......................................................................................................................................................................................................................................CT--------------------------------------G--CTGCCACCGCTGA.........................................................................................................................................16200.15300000000012000000
dm3
TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--CTGCCATCGCTGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCGT.......................................................................................22128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000010000100000002000000000000011010100202200001100000001000001031000040
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCG........................................................................................21122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000010100000100000000010000000100200000000100200000010121001010
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGCT--------------------------------------.........................................................................................................................................................22118.0018000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000100001001020001100210100000301000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAG.................................................................................................................................................................................................21116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000001100011000000110001010031010000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGC................................................................................................................................................................................................22115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000010000000000000000000000000010100000000000010001012004000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--......................................................................................................................................................24115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000001111000020101000002010000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------.........................................................................................................................................................23114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000001000000000000000010000000000000000100000000100000000000402000110
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCC.........................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000100052211000000
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGC................................................................................................................................................................................................21114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001001000000000000100000000000000001100000000010000000001000000000000000001000121000000
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--C.....................................................................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000001000000000000001000200000000000010000010
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--......................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010030000
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAG.................................................................................................................................................................................................2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000
....................................................................................................................................................................................................................................................................................................................................CGCCGACGTCCGTTT--------CTGT-TTGGC...................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCGTT......................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000001000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................TGT-TTGGCCCATTGCC-------------GT--T------GG-................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GTG---TTAGCT--------------------------------------G--CTGCCATCGCT...........................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--C.....................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTTGACG........................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCGTTA--------.............................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCGC.......................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTA..................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000
..............................................................................................................................C-----------------------GCAGCTGC------------------------------------------AGTTGACGTCGACG..................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--CT....................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................C-----------------------GCAGCTGC------------------------------------------AGTTGACGTCGA....................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTC..........................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010
.....................................................................................................................................................................................................................................................................................CCATCGCTGCTG-------------------------------CAGTCGCCG...............................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ATCGCTGCTG-------------------------------CAGTCGCC................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTT............2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGA................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................T--T------GG-CCAGCT------TCAGTGTTCAT.........2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAA.........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCC........................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCT------TCAGTGTTCATTTCCCC...2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................TCGCTGCTG-------------------------------CAGTCGCCG...............................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................C-------------GT--T------GG-CCAGCT------TCAGTGT.............1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................AGCTGC------------------------------------------AGTTGACGTCGA....................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................TCGACGCA-----GTG---TTAGCT--------------------------------------G--CTGCCATCGC............................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAGCT------TCAGTGTTCATTTCC.....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................CAGCTGC------------------------------------------AGTTGACGTCGACGA.................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--C.....................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CCCATTGCC-------------GT--T------GG-CCAGCT------T...................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................CTGCCATCGCTGCTG-------------------------------CAGTCG..................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------.............................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTG...........................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCATCGCTGCTG-------------------------------CAGTCGCCGT..............................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................C-----------------------GCAGCTGC------------------------------------------AGTTGACGTC......................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTTGACGTCGACGCA-----GTG---T....................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GG-CCAGCT------TCAGTGTTCAT.........1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CGACGTCCGTTT--------CTGT-TTGGC...................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................GCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------A...............................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AG..............................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................ATCGCTGCTG-------------------------------CAGTCGCCGAC.............................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................CGACGTCCGTTT--------CTGT-TTG.....................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CATCGCTGCTG-------------------------------CAGTCGCCGAC.............................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CAGTCGCCGACGTCCG........................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...AACAACGAAGA----------------------------A-------------TA-------CCAGAA-G...............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CAGTCGCCGACGTCCGT.......................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CC-------------GT--T------GG-CCAGCT------TCAGTGTTC...........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................T--------------------------------------G--CTGCCATCGCTGCTG-------------------------------CAG.....................................................................................................2011.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-....................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGCTGCTG-------------------------------CAGTCGCCGACGT...........................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...AACAACGAAGA----------------------------A-------------TA-------CCAGA..................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................GCTGC------------------------------------------AGTTGACGTCGACG..................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................GCAGCTGC------------------------------------------AGTTGACGTCGACGC.................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CAGTCGCCGACGTCC.........................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................ATTGCC-------------GT--T------GG-CCAGCT------TCAGTGT.............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGCT--------------------------------------A--TC....................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--CT....................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................AAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGC.............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................GCTGC------------------------------------------AGTTGACGTCGA....................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------A...............................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................CTGC------------------------------------------AGTTGACGTCGACGCA-----...........................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................GTTGACGTCGACGCA-----GTG---TTAA.................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................GCAGCTGC------------------------------------------AGTTGACGTCGAC...................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................AGTTGACGTCGACGCA-----GTG---TTAGC................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTTT--------CTGT-TTGGCCCATTGC............................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.ACAACAACGAAGA----------------------------A-------------TA-------CCAGA..................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCA...............................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTTGACGTCGACGCA-----GTG---TTAG.................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CCGACGTCCGTTT--------CTGT-TTGG....................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CAGTCGCCGACGT...........................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T-TTGGCCCATTGCC-------------GT--T------GG-CCAGC...........................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............GA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGC......................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................AGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGC.............................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................ACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--......................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................ATTGCC-------------GT--T------GG-CCAGCT------TCAGTG..............2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................TTGACGTCGACGCA-----GTG---TTAGCT--------------------------------------G--T.....................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GTAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCA-----GGT---TTCGCT------GCT------------------GG------------CTGCCACCGCTGCTG-------------------------------CATTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGA....................................................................................................................................................................................................................2211.0010000010
.................................................................................................................................................................................................................................................................................................................................................TT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-C...............................2511.0010001000
................................................................................GCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGT.............................................................................................................................................................................................................................2011.0010001000
........................................................................................................................................................................................................................................................................................................................................................................TTGCC-------------GT--T------GG-CCAGCT------TCAGTGTT............2411.0011000000
.....................................................................................AA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGT.......................................................................................................................................................................................................................2211.0010000100
TACAACAACGAAGA----------------------------A-------------TA-------CCA....................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
TACAACAACGAAGA----------------------------A-------------TA-------CCAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCGACGCTACTGCTGCTGC--TG------CT------------GCCGTTG-----------CTG--CTGCCACCGCTGCTG-------------------------------CATTCGCCGACGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................AGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTC......................................................................................................................................................................................................................2811.00100100000000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CATTCGCCGACGTCC.........................................................................................2111.00101000000000
....................................................................................................................................................................................................................................................................................GCCACCGCTGCTG-------------------------------CATTCGCCGAC.............................................................................................2411.00110000000000
.............................................................................................................................................................................................................................................................................................GCTG-------------------------------CATTCGCCGACGTCCGT.......................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CATTCGCCGACGTCCG........................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................................TGCTG-------------------------------CATTCGCCGACGTCCGT.......................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................CTGCTG-------------------------------CATTCGCCGACGTCCG........................................................................................2211.00100000010000
...................................................................AGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GC................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................GACGTCCGTTT--------CTGT-TTGGCCC.................................................................2211.00101000000000
..................................................................CAGAA-GAAGCAAAGCC-AAA---A------------------A----------------C-----------------------GCAGC.............................................................................................................................................................................................................................................................................2711.00100000010000
...........................................................................................................................................................................................................CGACGTCGACGCTACTGCTGCTGC--...................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................CGTCCGTTT--------CTGT-TTGGCCCATTGCC-------------..............................................2611.00101000000000
..............................................................................................................................C-----------------------GCAGCTGC------------------------------------------AGTCGACGTC......................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................GCTGC------------------------------------------AGTCGACGTCGAC...................................................................................................................................................................................................................1840.25110000000000
droEug1
TACAACAACGAACA------------------------------------------TAACGAA--CAAGAA-GAAGTAAAGCC-AAAAGAA------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------CCA-----------------------------GCTGCTCGCTGCAATCGCCGACATTCGTTT--------CTGT-TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotal
No Reads
droBia1
TGCAACAACT--------------------------------------------------------------GAAGAAAGGCCGAAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------GGCTGGCGTCGCCGCC-----GCC---GTCGCT---------------------GCCG----------------CTGCCGCCGCCACTG-------------------------------CACTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--G------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotal
No Reads
droTak1
TACAACAACGGCGA----------------------------A-------------AG-------GCAGAACGAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGCCGTCGACGTC-----G---------------CCG-------------------------------------------TCGCTG-------------------------------CACTTGGCGACGTCCGTTT--------TTCAGTTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotal
No Reads
droEle1
AACGGCAACGGCGA----------------------------A-------------GG-------C------AAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTTCCCATCSizeHit CountTotal NormTotal
No Reads
droRho1
TACAACGGCAACG------------------------------GC---AACAAAGG-C-------AAAGGC-AAAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAGTCGCCGACGTCCGTTT--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTTCCCATCSizeHit CountTotal NormTotal
No Reads
droFic1
A----CGACGAA-------------------------------------------------------------AAGAAAAGCC-AAA---A------------------A----------------C-----------------------GCAGCTGC------------------------------------------AGTCGACGTCG--------------------------CTG-------------------------------------C------CGCTG-------------------------------CAATCGCCGACGCTCGTTT--------CTGTGTTGGCCAATTGCC-------------GT--T------GG-CCAGCT------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotal
No Reads
droKik1
AACGAAAAAGAACG---CCAAAC--------------------GC---CACAAAAG-A-CGAAAGAAAGAA-------AAAAA-AAA---A------------------ACGGAAACGCAAAGCAAC-----------------------GCAACTGCAGTC-----------------------------CGGCGCTGCAGTCGACGTCG--------------------------CTG-------------------------------------CCCTCGCCTCTG-------------------------------C---CGCCGAC------TG--------ATG--TTGGCCGAATGCC-------------TTTTT------AG-CCAGCTTCATCGTCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotal
No Reads
droAna3
TACAATAACC--GA----------------------------A-------------GC-------CAAGAA-GAA--AACGCC-AAA---A------------------A----------------C-AAACTGCAGTC-TGCTGC-GTCGCTACTGCAGTCGTCGACGACGTCGATGTGGCTGCCGCTGCCACCGCT-----------------------------------------------GCTGTTGCCACTG-----------CTGCT--------GCTG---CTGCTGCTGCTGCAGAGCCTTCTGCT--------------GCTTTGGTTG--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCG------TCAGTGTTCATTTTCCCATCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................................................................GACGACGTCGATGTGGCTGC...............................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................................................................................................................................................................GCCTTCTGCT--------------GCTTTGGTTG--------CTG--TTG.....................................................................2611.001001000
....................................................................................................................................................................CGACGACGTCGATGTGGCTGC...............................................................................................................................................................................................................................................2111.001000001
..........................................................................A--AACGCC-AAA---A------------------A----------------C-AAACTGCAGTC-TGC.........................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................ACGACGTCGATGTGGCTGCCGCTGCCA.......................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................GTTGCCACTG-----------CTGCT--------GCTG---C......................................................................................................................................2040.251010000
droBip1
ACAAAAAACCAAA------------------------------GC---CA------TAACGAA--GAAGAA-GA--AAACGCC-AAA---A------------------A----------------C-AAACTGCAGTC-GGCTGC----GTCGCTGC------------------------------------------AGTCGACGACGCCGAC-----GTC---T--------------------------GCTG-----------CTACG--------GGTA---CTGCTGCCGCTGCAGCGCCTTCTGCT--------------GCTTTGGTTG--------CTG--TTGGCCAATTGCC-------------GT--T------GG-CCAGCG------TCAGTGTTCATTTTCCCATCSizeHit CountTotal NormTotal
No Reads
dp5
G----CAAC------------------------------------------------------------------GAAACGCC-AAA---A------------------A----------------C-ACGCTGCA-----------GTCGCTGCTGC------------------------------------------AGTCGACGCTGGCGTC-----G---------------TCGCCGTCGCCTTCTCTGCCG-----------CTGAC--------GCTG---CCGCTGACGATGTGAGGCCAGCCGCT-------------GGCTGCGGCCG--------CTG--TCGGCTGCTTGCCTGCA---------CC--C------GG-TCAGCG------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------G...............................................................................................2118.0080302021000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------................................................................................................2013.0030100020000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGC..............................................................................................................1913.0030101010000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCG...............................................................................................................1812.0020100001000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------GGC.............................................................................................2312.0020110000000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------T...............................................................................................2112.0020000020000
.................................................................................................................................................................................................................................................................................................................................................................CGGCTGCTTGCCTGCA---------CC--C------GG-TCA.............................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GGCCG--------CTG--TCGGCTGCTTGC............................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TGCGGCCG--------CTG--TCGGCTGCTTG.............................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................GATGTGAGGCCAGCCGCT-------------GGC.............................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------GT..............................................................................................2211.0010000001000
......................................................................................A---A------------------A----------------C-ACGCTGCA-----------GTCGCTGCTGC------------------------------------------AGTC............................................................................................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................................................CG--------CTG--TCGGCTGCTTGCCTGCA---------CC--C------G..................................2611.0010000100000
.......................................................................................................................................A-----------GTCGCTGCTGC------------------------------------------AGTCGACGCTGGC...................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------GG..............................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................TG--TCGGCTGCTTGCCTGCA---------C.............................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................CGGCTGCTTGCCTGCA---------CC--C------GG-TC..............................2311.0010010000000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------GGCTG...........................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................CGATGTGAGGCCAGCCGTA-------------T...............................................................................................2050.2010100000000
droPer2
G----CAAC------------------------------------------------------------------GAAACGCC-AAA---A------------------A----------------C-ACGCTGCA-----------GTCGCTGCTGC------------------------------------------AGTCGACGCTGGCGTC-----G---------------TCGCCGTCGCCTTCTCTGCCG-----------CTGCC--------GCTG---ACGCTGACGATGTGAGGCCAGCCGCT-------------GGCTGCGGCCG--------CTG--TCGGCTGCTTGCCTGCA---------CC--C------GG-TCAGCG------TCAGTGTTCATTTCCCCATCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..............................................................................................................................................................................................................................................CGCCGTCGCCTTCTCTGCCG-----------CTGCC--------..............................................................................................................................................2512.002200000
.............................................................................................................................................................................................................................G---------------TCGCCGTCGCCTTCTCTGCC.......................................................................................................................................................................2112.002200000
.............................................................................................................................................................................................................................................................................................................................................................G--TCGGCTGCTTGCCTGCA---------CC--C------...................................2111.001010000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGC..............................................................................................................1911.001000001
.........................................................................................................................................................................................................................................................................................................GATGTGAGGCCAGCCGCT-------------GT..............................................................................................2011.001000001
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------G...............................................................................................2111.001000100
........................................................................................................................................................................................................................................................................................................................................................................TTGCCTGCA---------CC--C------GG-TCAGCG------TCA.................2311.001000010
........................................................................................................................................................TGCTGC------------------------------------------AGTCGACGCTGGC...................................................................................................................................................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT-------------GG..............................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCG...............................................................................................................1811.001000010
.......................................................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGT..............................................................................................................1911.001000010
.........................................................................................................................................................................................................................................................................................................................................................................TGCCTGCA---------CC--C------GG-TCAGCG------TCA.................2211.001010000
droWil2
TACAACAACAAAGAGAAATAAAAACTATAACAACAACATAACAAA-------------------------A-G---GAAAATA-AAAAGAAATGAAAAGAAAAACTT-AAAAACT----------GCACAGTTGCAGTCATGCTGCTGCCTCTGCTGC------------------------------------------AGTTGACGTCGACTTC-----GGTTGC--TGCT---GCT---------------GGTG----------------CTGGTGCTGCTGCTG-------------------------------CAGTTGCTGTTGGCGTTTTGGCAT--TTGGT-TTGG----------------------TC--T------GG-CCACAG------TCAGTGTTAATTTCCTCATCSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................................................................AGTTGACGTCGACTTC-----GGT........................................................................................................................................................................................................1911.00100100
............................................................................................................................................................................................................................................................................................................................................................GGT-TTGG----------------------TC--T------GG-CCACAG------TCAGTGTT............2611.00100010
.....................................................................................................................................................CTCTGCTGC------------------------------------------AGTTGACGTC......................................................................................................................................................................................................................1911.00110000
........................................................................................................................................................................................................................................................................................................................................GTTGGCGTTTTGGCAT--TTGGT-TTG.....................................................................2411.00100100
.................................................................................................................................................................................................................CGACTTC-----GGTTGC--TGCT---GCT---------------..........................................................................................................................................................................2011.00100100
...........................................................................................................................................................................................................TGACGTCGACTTC-----GGTTGC--TGCT---............................................................................................................................................................................................2311.00101000
droVir3
TACAACAG-GAACA---ACACAAACAAGGACA--AACATAACAGC-------------------------A-GCAACAACAAC-AAC---AACAACGAGAACAACGAGAACAACA------------------GCA-----------ATTACCATTGCATTCGCAGTCGCTGTCGCTGT------CGCAGTCGCAGCTGCAGTTGACGTCGACAGC-----GCT---TGCGGCGCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCGTCTGCTT--------TCAG-CT------------GCAACGGCCAACGT--CGTCAGTCG-CCAGTC-----GTCAGTTTTAATTTCCACATCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC-----...........................................................................................................................................................................................................22151.005110400100000000011001000300000000000000000000000000000000000002100000096022800000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGC..............................................................................................22134.00343100000100000034000000200010020000000000000000000000000000001100000062112300000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC-----GC.........................................................................................................................................................................................................24129.00291110000000000000000010900000000000000001000000000000000000002000000053111200000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC-----G..........................................................................................................................................................................................................23121.00211100032000000001000000710000000000000000000000000000000000000000000001012100000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCT................................................................................................20118.00181140000000000021000004300000000000000000000000000000000000000000000010001000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTG...............................................................................................21111.00113010000000000010000001200000000000000000000000000000000000000000000011001000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGA..............................................................................................2218.0081010000000000023000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAG.................................................................................................................................................................................................................2118.0083110000000000000000000100000010000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................GCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGC..............................................................................................2317.0070040000000000000000000000000000000000000000000000000000000000000000001000200000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGT..............................................................................................2217.0070000000000000001001000200100000000000000000000000000000000000100000000000100000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACA..................................................................................................................................................................................................................2016.0061000000000000001000000100000000000000000000000000000000000000100000000101000000
.........................................................................................................................................................................................................................................GCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGT..............................................................................................2316.0060000000000000030000001100000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCT.............................................................................................2314.0041000000000000011000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................CC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTG...............................................................................................1814.0041000000000000000000000000000000000000000000000000000000000000000000030000000000
.............................................................................................................................................................................................................................................CC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCG............................................................................................2114.0041100000000000001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GCTGCAGTTGACGTCGACAGC-----GC.........................................................................................................................................................................................................2313.0030010000000000000000000100000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGAC...................................................................................................................................................................................................................1912.0020010000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GGCCAACGT--CGTCAGTCG-C...............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000200000000
.............................................................................................................................................................................................................................................CC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCGT...........................................................................................2212.0020000000000000000000000000000000000000001000000000000000000000000000000000100000
....................................................................................................................................................................................................CTGCAGTTGACGTCGACAGC-----GC.........................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000020000000000
...................................................................................................................................................................................................GCTGCAGTTGACGTCGACAGC-----...........................................................................................................................................................................................................2112.0022000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GCGCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCC.............................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000001000100000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGA-----...........................................................................................................................................................................................................2212.0020010000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGTT.............................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000002000000000
.......................................................................................................................................................................................................................................GCGCTGCC---------------CGT--TGGCTGC..............................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000030000000
.........................................................................................................................................................................................CGCAGTCGCAGCTGCAGTTGACGTCGAC...................................................................................................................................................................................................................2811.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGTTGACGTCGACAGC-----GCT---.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................AACGGCCAACGT--CGTCAGTCG-CCAGTC-----.....................2711.0010000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TT--------TCAG-CT------------GCAACGGCCAACGT--CGTCA.....................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GCTGCAGTTGACGTCGACAGC-----GCT---.....................................................................................................................................................................................................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCGTCT.........................................................................................2611.0010000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GTCGCAGCTGCAGTTGACGTCGACA..................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GC.................................................................................................1911.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGCAGTCGCAGCTGCAGTTGACGT.......................................................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCTT............................................................................................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGT..............................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCA.............................................................................................2311.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACGT--CGTCAGTCG-CCAGTC-----GTCAGT...............2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGC..............................................................................................2111.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGCCGTCTGCTT--------TCAG-CT------------GC........................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CGCAGCTGCAGTTGACGTCGACAGC-----GC.........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................GCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGG..............................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCC.............................................................................................2311.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC-----GCT---.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGAA.............................................................................................2311.0010000000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GCTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCT.............................................................................................2411.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCT................................................................................................1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................C---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCGT...........................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GCTGCAGTTGACGTCGACAGC-----G..........................................................................................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TCGCAGCTGCAGTTGACGTCGAC...................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................................................................TGCGGCGCTGCC---------------CGT--TGGCTGC..............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC-----C..........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................TCGCAGCTGCAGTTGACGTC......................................................................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ACGGCCAACGT--CGTCAGTCG-CC..............................2211.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CGCAGCTGCAGTTGACGTCGACAG.................................................................................................................................................................................................................2411.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTT...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................GCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCTGCCG............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................GT------CGCAGTCGCAGCTGCA...............................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................AAC-AAC---AACAACGAGAACAACGAGAACA........................................................................................................................................................................................................................................................................................................................2820.5010001000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TGCC---------------CGT--TGGCTGCC------------A---------------------------------------------GCG................................................................................................1920.5011000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AC-AAC---AACAACGAGAACAACGAGAAC.........................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................AACAAC-AAC---AACAACGAGAACAACGA.............................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000100000000000000000000000000000000000000000000000000000000000
....................................................................................AAC---AACAACGAGAACAACGAGAACA........................................................................................................................................................................................................................................................................................................................2530.3310000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................CATAACAGC-------------------------A-GCAACAACAAC-AAC---..............................................................................................................................................................................................................................................................................................................................................2430.3310000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AC---AACAACGAGAACAACGAGAAC.........................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................AACGAGAACAACGAGAACAACA------------------...................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTGCC---------------CGT--TGGCTGCC------------A---------------------------------------------AA.................................................................................................19100.1010010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCGCAGTCGCTGTCGCTGT------C..............................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................GCTGTCGCTGT------CGCAGTC........................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................C-------------------------A-GCAACAACAAC-AAC---AACAACG.......................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCGCAGTCGCTGTCGCTG......................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................CGCTGTCGCTGT------CGCAGT.........................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000010000000000000000000000000000000000000000
droMoj3
TGCGACAACAGCAA----------------------------C-----AACAAGAG---------CACGAC-GCAGAAGAACA-ACA---A-----------------AACGGCA----------------TTGCAGTCACGCT---------------------------GTCGCTGT------CGCTACCGCAGCTGCAGTCAGCGCTGGCAGC-----GCT------------GCC---------------TGTGCTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--TCAGCT--------GCAACGGCCAACGT--C------GG-CAGTCG------TCAGTTTTAATTTCCACATCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAG..........................................................................................................................................................................................................................21117.00171700000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCA...........................................................................................................................................................................................................................20116.00161301101
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGC.........................................................................................................................................................................................................................22114.00141400000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------T...........................................................................22110.00101000000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATG........................................................................................2019.009600201
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--........................................................................2318.008800000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------............................................................................2116.006501000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--T.......................................................................2416.006600000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTC............................................................................................................................................................................................................................1915.005400100
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGCG........................................................................................................................................................................................................................2313.003300000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGCGCT......................................................................................................................................................................................................................2512.002200000
..................................................................................................................................................................................................................................................................CTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------............................................................................2212.002200000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--A.......................................................................2412.002100100
..................................................................................................................................................................................................................................................................CTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TA--A.......................................................................2511.001100000
..........................................................................................................................................................................................GCTACCGCAGCTGCAGTCAGC.........................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................GCT--------GCAACGGCCAACGT--C------GG-CAGTC...........................2511.001100000
...................................................................................................................................................................................................................................................................TGGCTGCC------------A---------------------------------------------GTTGCCGTAT.........................................................................................1911.001100000
....................................................................................................................................................................................................................................................................GGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--A.......................................................................2311.001100000
..............................................................................GAACA-ACA---A-----------------AACGGCA----------------TTGCA................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGCGCTGG....................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................TGTGCTGGCTGCC------------A---------------------------------------------GTTGCCG............................................................................................2111.001000100
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGCGCTGGC...................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCAGT.........................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................T------CGCTACCGCAGCTGCAGTC............................................................................................................................................................................................................................2011.001000100
..................................................................................................................................................................................................................................................................CTGGCTGCC------------A---------------------------------------------GTTGCCGTATG........................................................................................2111.001000100
....................................................................................................................................................................................................................................................................GGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--........................................................................2211.001100000
..............................................................................................................................................................................................................................................................TGTGCTGGCTGCC------------A---------------------------------------------GTTGC..............................................................................................1911.001100000
............................................................................................................................................................................................TACCGCAGCTGCAGTCAGCGCT......................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................CTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--T.......................................................................2511.001100000
..................................................................................................................................................................................................................................................................CTGGCTGCC------------A---------------------------------------------GTTGCCGTATGC-----------TT--........................................................................2411.001100000
.........................................................................................................................................................................................CGCTACCGCAGCTGCAGTCT...........................................................................................................................................................................................................................2020.501100000
droGri2
AACAACAACAACA------------------------------GCAGCAACAA---CA-------GCAGCA-GCAGCAGTAGC-AAC---A---------------AGAACTACA-----------------AGCA-----------GTCGCAGCTGC------------------------------------------AGTTGACGTCGGCAGC-----GCT---G---------TTTCTGTTGCGTTGGCTG----------ACAGCTGCT--------GCTG---CTGCTAGCTGCTTGCTGCTTGCCGCT-------------AGCTGCTTGGG-----CTGCAT--TCAGCT--------GCAACAGCCAACG----GGCAA-CGTCAGTCG------TCAGTTTTAATTTCCACATCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................................................................................................................................TTGCGTTGGCTG----------ACAGCTGCT--------..............................................................................................................................................2112.00211
...................................................................................................................................................................................................................................................TTGCGTTGGCTG----------ACAGCTGCT--------G.............................................................................................................................................2211.00110
...................................................................................................................................................................................................................................................TTGCGTTGGCTG----------ACAGCTGCT--------GC............................................................................................................................................2311.00110
...............................................................................................................................................................................................................................................................................................................CTGCTTGCCGCT-------------AGCTGCTTGG......................................................................................2211.00110
..........ACA------------------------------GCAGCAACAA---CA-------GCAGCA-................................................................................................................................................................................................................................................................................................................................................................21200.30660
..........ACA------------------------------GCAGCAACAA---CA-------GCAGCA-GCA.............................................................................................................................................................................................................................................................................................................................................................24200.10220
....ACAACAACA------------------------------GCAGCAACAA---CA-------GCAGCA-G...............................................................................................................................................................................................................................................................................................................................................................28200.05110
.................................................ACAA---CA-------GCAGCA-GCAGCAGTA.......................................................................................................................................................................................................................................................................................................................................................21200.05101

Generated: 10/20/2015 at 07:29 PM