ID:

dse_32

 Coordinate:

scaffold_14:241021-241085 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.2 -33.8

Flybase annnotation

utr3 [utr3_minus_42]

No Repeatable elements found

Sense Strand Reads

GATTCAAAATATTACTTGTACAATCTGGACAAAATTGCTCAACATTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCTGTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAACGAAAAGTGGTTTTCATTCACAGAGTATAAA

***********************************.(((((((.((((((((((.(((.(((((((((.((((.................))))))))))))).))).))))))))))))).))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V115

head

 V113

male body
............................................................................................TAAGCGTATAGCTTTTCCCCTT................................................... 22 0 1 7805.00 7805 6950 385 332 138
..................................................GGGGTGAAACTGTACGTTATATG............................................................................................ 23 0 1 1036.00 1036 144 485 308 99
............................................................................................TAAGCGTATAGCTTTTCCCCT.................................................... 21 0 1 978.00 978 765 49 139 25
............................................................................................TAAGCGTATAGCTTTTCCCCTTT.................................................. 23 1 1 365.00 365 318 16 24 7
.............................................................................................AAGCGTATAGCTTTTCCCCTT................................................... 21 0 1 337.00 337 328 2 7 0
..............................................................................................AGCGTATAGCTTTTCCCCTT................................................... 20 0 1 123.00 123 119 3 1 0
............................................................................................TAAGCGTATAGCTTTTCCCC..................................................... 20 0 1 106.00 106 85 7 14 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTA.................................................. 23 0 1 55.00 55 50 3 1 1
............................................................................................TAAGCGTATAGCTTTTCCCCGT................................................... 22 1 1 42.00 42 41 0 0 1
...........................................................................................GTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 37.00 37 37 0 0 0
.............................................................................................AAGCGTATAGCTTTTCCCCT.................................................... 20 0 1 35.00 35 35 0 0 0
............................................................................................TAAGCGTATAGTTTTTCCCCTT................................................... 22 1 1 30.00 30 24 6 0 0
............................................................................................TAAGCGTATAGCTTTTCCCTTT................................................... 22 1 1 29.00 29 1 27 1 0
............................................................................................TAAGAGTATAGCTTTTCCCCTT................................................... 22 1 1 25.00 25 25 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTA................................................... 22 1 1 23.00 23 22 0 1 0
..................................................GGGGTGAAACTGTACGTTATAT............................................................................................. 22 0 1 22.00 22 4 11 5 2
............................................................................................TAAGCGTATAGCTTTTCACCTT................................................... 22 1 1 20.00 20 19 0 1 0
...................................................GGGTGAAACTGTACGTTATATG............................................................................................ 22 0 1 20.00 20 17 2 1 0
............................................................................................TAACCGTATAGCTTTTCCCCTT................................................... 22 1 1 20.00 20 18 0 2 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTT................................................. 24 2 1 19.00 19 18 1 0 0
............................................................................................GAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 19.00 19 19 0 0 0
............................................................................................TAAGCGAATAGCTTTTCCCCTT................................................... 22 1 1 19.00 19 19 0 0 0
............................................................................................AAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 15.00 15 15 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTG.................................................. 23 1 1 14.00 14 14 0 0 0
...............................................................................................GCGTATAGCTTTTCCCCTT................................................... 19 0 1 12.00 12 12 0 0 0
...........................................................................................ATAAGCGTATAGCTTTTCCCCTT................................................... 23 0 1 12.00 12 12 0 0 0
............................................................................................TAATCGTATAGCTTTTCCCCTT................................................... 22 1 1 11.00 11 9 2 0 0
.............................................................................................AAGCGTATAGCTTTTCCCCTTT.................................................. 22 1 1 11.00 11 10 0 1 0
............................................................................................TAAGCGTATAGCTCTTCCCCTT................................................... 22 1 1 11.00 11 8 3 0 0
............................................................................................CAAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 10.00 10 10 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTC................................................... 22 1 1 10.00 10 6 4 0 0
............................................................................................TAAGCGTATAGCCTTTCCCCTT................................................... 22 1 1 10.00 10 9 1 0 0
..................................................GGGGTGAAACTGTACGTTATA.............................................................................................. 21 0 1 9.00 9 5 3 0 1
...........................................................................................GTAAGCGTATAGCTTTTCCCCT.................................................... 22 1 1 9.00 9 9 0 0 0
............................................................................................TAGGCGTATAGCTTTTCCCCTT................................................... 22 1 1 9.00 9 9 0 0 0
............................................................................................TGAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 9.00 9 7 0 1 1
............................................................................................TAAGCGTATAGCTTTTCCCCTTC.................................................. 23 1 1 9.00 9 8 0 1 0
.................................................GGGGGTGAAACTGTACGTTATATG............................................................................................ 24 0 1 9.00 9 4 3 2 0
............................................................................................TAAGCGTATAGCTTTTTCCCTT................................................... 22 1 1 8.00 8 6 2 0 0
................................................................................................CGTATAGCTTTTCCCCTT................................................... 18 0 1 8.00 8 6 1 0 1
............................................................................................TAAGCGCATAGCTTTTCCCCTT................................................... 22 1 1 8.00 8 6 1 1 0
............................................................................................TAAGCGTATAGCTTTCCCCCTT................................................... 22 1 1 7.00 7 6 0 1 0
............................................................................................TAAGCGGATAGCTTTTCCCCTT................................................... 22 1 1 7.00 7 6 0 1 0
............................................................................................TAAGCGTATAGCTTTCCCCTT.................................................... 21 2 1 7.00 7 6 0 1 0
............................................................................................TAAGTGTATAGCTTTTCCCCTT................................................... 22 1 1 7.00 7 4 3 0 0
............................................................................................TAAGCCTATAGCTTTTCCCCTT................................................... 22 1 1 6.00 6 2 2 2 0
............................................................................................TAAACGTATAGCTTTTCCCCTT................................................... 22 1 1 6.00 6 6 0 0 0
............................................................................................TTAGCGTATAGCTTTTCCCCTT................................................... 22 1 1 6.00 6 5 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTAAA................................................ 25 0 1 6.00 6 5 1 0 0
............................................................................................TAAGCTTATAGCTTTTCCCCTT................................................... 22 1 1 5.00 5 5 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTG................................................... 22 1 1 5.00 5 5 0 0 0
....................................................GGTGAAACTGTACGTTATATG............................................................................................ 21 0 1 5.00 5 4 1 0 0
..................................................GGGGCGAAACTGTACGTTATATG............................................................................................ 23 1 1 5.00 5 2 2 1 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTAA................................................. 24 0 1 5.00 5 3 1 0 1
............................................................................................TAACCGTATAGCTTTTCCCCT.................................................... 21 1 1 5.00 5 5 0 0 0
..................................................GTGGTGAAACTGTACGTTATATG............................................................................................ 23 1 1 5.00 5 3 0 2 0
............................................................................................TAAGCGTATAGCTTTTCCCCTAA.................................................. 23 1 1 5.00 5 5 0 0 0
.............................................................................................AAGCGTATAGCTTTTCCCC..................................................... 19 0 1 5.00 5 5 0 0 0
.....................AATTTGGACAAACTTGGTCA............................................................................................................................ 20 3 20 4.80 96 58 5 0 33
..................................................GGGGTGAAGCTGTACGTTATATG............................................................................................ 23 1 1 4.00 4 0 3 1 0
..................................................GGGGTGAAACTGTACGTTATATGA........................................................................................... 24 1 1 4.00 4 1 2 0 1
..................................................GGGGTAAAACTGTACGTTATATG............................................................................................ 23 1 1 4.00 4 1 1 1 1
............................................................................................TAAGCGTATAGCTTTTCCCCG.................................................... 21 1 1 4.00 4 4 0 0 0
..................................................GGGGTGAAATTGTACGTTATATG............................................................................................ 23 1 1 4.00 4 0 4 0 0
............................................................................................TAAGCGTATAGCTTTTCCC...................................................... 19 0 1 4.00 4 2 0 2 0
............................................................................................TAAGCGTATAGCTTTTCCCCTAT.................................................. 23 2 1 4.00 4 4 0 0 0
............................................................................................TAAGCGTATAGCTGTTCCCCTT................................................... 22 1 1 4.00 4 3 1 0 0
..................................................GGGGTTAAACTGTACGTTGTATG............................................................................................ 23 2 1 4.00 4 0 0 4 0
...........................................................................................CTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 4.00 4 4 0 0 0
..................................................GGGGTGAAACTTTACGTTATATG............................................................................................ 23 1 1 4.00 4 3 0 1 0
...........................................................................................TTAAGCGTATAGCTTTTCCCCTT................................................... 23 1 1 4.00 4 4 0 0 0
..............................................................................................AGCGTATAGCTTTTCCCCTTT.................................................. 21 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCGCTT................................................... 22 1 1 3.00 3 2 0 0 1
............................................................................................TAAGCGTATACCTTTTCCCCTT................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTCTAGCTTTTCCCCTT................................................... 22 1 1 3.00 3 3 0 0 0
.........................................................................TGCCCTTCTGTGAAATTCA......................................................................... 19 0 1 3.00 3 3 0 0 0
............................................................................................TAAGCGCATAGCTTTTCCCCT.................................................... 21 1 1 3.00 3 2 0 1 0
............................................................................................TAAACGTATAGCTTTTCCCCT.................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTTT................................................ 25 3 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCTCTT................................................... 22 1 1 3.00 3 2 0 0 1
............................................................................................TAAGCGTATAGCTTGTCCCCTT................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATAGTTTTTCCCCT.................................................... 21 1 1 3.00 3 2 1 0 0
..............................................................................................AGCGTATAGCTTTTCCCCT.................................................... 19 0 1 3.00 3 3 0 0 0
............................................................................................TAAGCATATAGCTTTTCCCCTT................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATAGCTTTGCCCCTT................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................AAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TAAGCGTATATCTTTTCCCCTT................................................... 22 1 1 2.00 2 1 0 1 0
............................................................................................TAAGCGTATAACTTTTCCCCTT................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGAATAGCTTTTCCCCT.................................................... 21 1 1 2.00 2 2 0 0 0
..................................................GGGGTGAAACTGTACGTTA................................................................................................ 19 0 1 2.00 2 0 1 1 0
..................................................GGGGTGAAACTGTACGTTATATGGGTC........................................................................................ 27 2 1 2.00 2 0 1 0 1
............................................................................................TAAGCGTATAGCTTTTCCCCTTAT................................................. 24 1 1 2.00 2 1 0 0 1
............................................................................................TAAGCGTATGGCTTTTCCCCTT................................................... 22 1 1 2.00 2 1 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTCT................................................. 24 2 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTAAAGCTTTTCCCCTT................................................... 22 1 1 2.00 2 2 0 0 0
..................................................GGGTTGAAACTGTACGTTATATG............................................................................................ 23 1 1 2.00 2 1 0 0 1
............................................................................................GAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCACTT................................................... 22 1 1 2.00 2 0 0 0 2
............................................................................................TAAGCGTATAGCTTTTCCCCTTTGT................................................ 25 3 1 2.00 2 0 0 0 2
..................................................GGGGTGAAACTGTACGTTAT............................................................................................... 20 0 1 2.00 2 0 2 0 0
.............................................................................................AAGCGTCTAGCTTTTCCCCTT................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCACCTTT.................................................. 23 2 1 2.00 2 2 0 0 0
..................................................GGGGTGAAACTGTACGTTGTATG............................................................................................ 23 1 1 2.00 2 0 1 0 1
...........................................................................................GTAAGCGTATAGCTTTTCCCCTTT.................................................. 24 2 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCT..................................................... 20 1 1 2.00 2 1 0 1 0
............................................................................................TAAGCGTATAGCTTCTCCCCTT................................................... 22 1 1 2.00 2 1 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA............................................... 26 0 1 2.00 2 2 0 0 0
.........................................................................TGCCCTTCTGTGAAATTC.......................................................................... 18 0 1 2.00 2 0 2 0 0
.............................................................................................AAGCGTATAGCTTTTCCCCTTTT................................................. 23 2 1 2.00 2 1 0 1 0
..................................................GGGGTGAAACTGTACGTTATATGTGCC........................................................................................ 27 0 1 2.00 2 1 1 0 0
..................................................GGGGTGAAACTCTACGTTATATG............................................................................................ 23 1 1 2.00 2 0 2 0 0
.............................................................................................AAGCGTATAGCTTTTCCCCTG................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTAACC............................................... 26 2 1 2.00 2 0 1 0 1
..................................................GGGGTGAACCTGTACGTTATATG............................................................................................ 23 1 1 2.00 2 2 0 0 0
............................................................................................TAAGAGTATAGCTTTTCCCCT.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCACCT.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTGTAGCTTTTCCCCTT................................................... 22 1 1 2.00 2 1 1 0 0
.............................................................................................AACCGTATAGCTTTTCCCCTT................................................... 21 1 1 2.00 2 1 0 1 0
............................................................................................TAAGCGTACAGCTTTTCCCCTT................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................CAAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCCT................................................... 22 1 1 2.00 2 2 0 0 0
................................................................................................CGTATAGCTTTTCCCCTTT.................................................. 19 1 1 2.00 2 1 0 1 0
..................................................GGGGTGAAACTGTACGTT................................................................................................. 18 0 1 2.00 2 0 2 0 0
...........................................................................................GTAAGCGTATAGCTTTTCCCCTTA.................................................. 24 1 1 2.00 2 2 0 0 0
..................................................GGGGTGAAAATGTACGTTATATG............................................................................................ 23 1 1 2.00 2 0 2 0 0
..................................................GGGGTGAAACTGTTCGTTATATG............................................................................................ 23 1 1 2.00 2 0 2 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCGTT.................................................. 23 2 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGATTTTCCCCTT................................................... 22 1 1 2.00 2 1 1 0 0
.............................................................................................AAGCGTCTAGCTTTTCCCCT.................................................... 20 1 1 2.00 2 2 0 0 0
............................................................................................TAAGGGTATAGCTTTTCCCCTT................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGCATAGCTTTTCCCC..................................................... 20 1 1 2.00 2 2 0 0 0
............................................................................................TAAGCGTATAGCTTTCCCCT..................................................... 20 2 2 1.50 3 2 0 1 0
.................GTAGAATTTGGACAAACTTG................................................................................................................................ 20 3 20 1.15 23 23 0 0 0
............................................................................................TAAGCTTATAGCTTTTCCCCTTT.................................................. 23 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCTTATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTACCCTT................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCTCCTA................................................... 22 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAATCTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
...................................................GGGTGAAACTGTACGTTATAT............................................................................................. 21 0 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTCTCCCCTTT.................................................. 23 2 1 1.00 1 1 0 0 0
..............................................................................................AGCGTATAGCTTTTCCCCTTTT................................................. 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCCTTTCCCCTTT.................................................. 23 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCG..................................................... 20 1 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTATAGCTTTTCCACTT................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGATACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
.............................................................................................AATCGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 1 0 0 0
..........................................................................................ACTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 1.00 1 1 0 0 0
.......................................................................................CTTTGTAAGCGTATAGCTTTTCCCCTT................................................... 27 3 1 1.00 1 1 0 0 0
..................................................TGGGTGAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 0 1 0
...........................................................................................GTAAGCGTTTAGCTTTTCCCCTT................................................... 23 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACCGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
..........................................................................................GCTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 1.00 1 1 0 0 0
.............................................................................................AGGCGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 1 0 0 0
...................................................GGGTGACACTGTACGTTATATG............................................................................................ 22 1 1 1.00 1 1 0 0 0
........................................................................................TTGCTAAGCGTATAGCTTTTCCCCTT................................................... 26 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGTTTTTCCCCTA................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCCTTTCCCCTTTT................................................. 24 3 1 1.00 1 1 0 0 0
...........................................................................................GTAAGCGTATAGCTTTTCCCCTTGA................................................. 25 2 1 1.00 1 1 0 0 0
............................................................................................CAAGAGTATAGCTTTTCCCCTT................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAACCGTATAGCTTTTCCCC..................................................... 20 1 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTATAGCTTCTCCCCT.................................................... 20 1 1 1.00 1 1 0 0 0
..................................................GGGGTCAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 0 1 0
..................................................GGGGTGAAACTGTACGTTATATGTG.......................................................................................... 25 0 1 1.00 1 0 0 1 0
............................................................................................TAAGCGTATAGCTTTGCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..............................................................................................AGCGTATAGCTTTTCCCCTG................................................... 20 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCACCTC................................................... 22 2 1 1.00 1 1 0 0 0
..................................................GGTGTGAAACTGTACGTT................................................................................................. 18 1 1 1.00 1 0 0 1 0
............................................................................................TACTCGTATAGCTTTTCCCCTT................................................... 22 2 1 1.00 1 0 1 0 0
..................................................GGGGTGAAACTGTACGTTATATT............................................................................................ 23 1 1 1.00 1 0 1 0 0
...............................................................................................GCGAATAGCTTTTCCCCTT................................................... 19 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCGTTTCCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
...........................................................................................GTACGCGTATAGCTTTTCCCCTT................................................... 23 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTATCCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................................TAAGTGTATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAAAGTATAGCTTTTCCCCTT................................................... 22 2 1 1.00 1 1 0 0 0
...................................................GGGTGAAACTGTACGTTATATC............................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTATGTG............................................................................................ 23 1 1 1.00 1 1 0 0 0
............................................................................................TGAGCGTATAGCTTTTCCCTTT................................................... 22 2 1 1.00 1 0 1 0 0
............................................................................................TAAGCGCATAGCTTTTCCCCTTTC................................................. 24 3 1 1.00 1 1 0 0 0
..............................................................................................AGCGTATAGCTTTTCCCC..................................................... 18 0 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTATATGGGC......................................................................................... 26 1 1 1.00 1 0 1 0 0
.............................................................................................AAGCGCATACCTTTTCCCCTT................................................... 21 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCGCT.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................CTTTCTAAGCGTATAGCTTTTCCCCTT................................................... 27 3 1 1.00 1 1 0 0 0
.......................................................................................CGGCATAAGCGTATAGCTTTTCCCCTT................................................... 27 3 1 1.00 1 1 0 0 0
.............................................................................................TAGCGTATAGCTTTTCCCCT.................................................... 20 1 1 1.00 1 0 1 0 0
............................................................................................TAACCGAATAGCTTTTCCCCTT................................................... 22 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTATGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
............................................................................................TACGCGTATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 0 0 1 0
.............................................................................................ATTCGTATAGCTTTTCCCCTT................................................... 21 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTGCGTTATATG............................................................................................ 23 1 1 1.00 1 0 0 0 1
.........................................................................TGCCCTTCTGTGTAATTCA......................................................................... 19 1 1 1.00 1 1 0 0 0
...........................................................................................GTAAGCGTATAGCTTTGCCCCTT................................................... 23 2 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTATAGCTTTCCCCCTT................................................... 21 1 1 1.00 1 0 0 1 0
..................................................GGGGGGAAACTGTACGTTATCTG............................................................................................ 23 2 1 1.00 1 0 0 1 0
.................................................GGGGGTGAAACTGTACGTTAT............................................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTCTAGCTTTTCCCCTTC.................................................. 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTACCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
..................................................GGGGGGAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
................................................CTGGGGTGAAACTGTACGTTATATG............................................................................................ 25 2 1 1.00 1 1 0 0 0
.................................................................................................GTATAGCTTTTCCCCTTT.................................................. 18 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTCC................................................ 25 3 1 1.00 1 0 0 1 0
............................................................................................TGAGCGTATAGCTTTTCCCCGT................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTGCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTCT.................................................. 23 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTAACGG.............................................. 27 2 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTATAGCTTTTCCCCTC................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTACC................................................ 25 2 1 1.00 1 0 0 0 1
..................................................GGGGTGAAGCTTTACGTTATATG............................................................................................ 23 2 1 1.00 1 0 0 1 0
............................................................................................TAAGCGTATAGCTTTTCCCCTGT.................................................. 23 2 1 1.00 1 0 0 1 0
............................................................................................TAAGCCTATAACTTTTCCCCT.................................................... 21 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTCTAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTTTAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTCTATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
..............................................................................................TACGTATAGCTTTTCCCCTT................................................... 20 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCCTATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTATATGTT.......................................................................................... 25 1 1 1.00 1 1 0 0 0
.............................................................................................AAACGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGGATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 0 0 1 0
............................................................................................TAAGCGTATAGCTTTTACACT.................................................... 21 2 1 1.00 1 0 0 1 0
..................................................GGGGTGAATCTGTACGTTATAT............................................................................................. 22 1 1 1.00 1 0 1 0 0
...............................................................................................GCGTATCGCTTTTCCCCTT................................................... 19 1 1 1.00 1 1 0 0 0
............................................................................................TAACCGTATAGCTTTTCCCCTTT.................................................. 23 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTAAA............................................... 26 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTCCCCCTT.................................................... 21 3 2 1.00 2 2 0 0 0
..............................................................................................AGCGTATAGCTCTTCCCCTT................................................... 20 1 1 1.00 1 1 0 0 0
......................................................................AATTGCCCTTCTGTGAAATTCA......................................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATTGCTTTTCCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAACTTTTCCCCG.................................................... 21 2 1 1.00 1 1 0 0 0
............................................................................................AAAGCGTATAGCTTTTCCCCGT................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCTCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTATACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
...................................................GGGGTGAACTGTACGTTATATG............................................................................................ 22 3 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTC................................................. 24 2 1 1.00 1 0 1 0 0
...........................................................................................CTAAGCGTATAGCTTTCCCCTT.................................................... 22 3 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCACT.................................................... 21 1 1 1.00 1 0 0 0 1
.................................................GGGGGTGAAACTGTACGT.................................................................................................. 18 0 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTGT................................................. 24 2 1 1.00 1 0 0 1 0
...........................................................................................GTAAGAGTATAGCTTTTCCCCTT................................................... 23 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAGACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
...........................................................................................CTAAGCGTATAGCTTTTCCCCT.................................................... 22 1 1 1.00 1 0 0 1 0
............................................................................................GAAGCGTATAGTTTTTCCCCTT................................................... 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATCGCTTTTCCCCT.................................................... 21 1 1 1.00 1 0 0 1 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTA................................................. 24 1 1 1.00 1 1 0 0 0
........................................................................................CACATAAGCGTATAGCTTTTCCCCTT................................................... 26 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGTTTTTCCCCTTT.................................................. 23 2 1 1.00 1 1 0 0 0
.............................................................................................AAGCGTATAGCTTTGCCCCTT................................................... 21 1 1 1.00 1 1 0 0 0
.............................................................................................CAGCGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTTAA................................................ 25 1 1 1.00 1 1 0 0 0
...............................................................................................GCGTATAGCTTTTCCCCTTT.................................................. 20 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTATATC............................................................................................ 23 1 1 1.00 1 0 0 0 1
..................................................GGGGTGAAACTGTACGCTACATG............................................................................................ 23 2 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTATTCCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
..................................................AGGGTGAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCGTTTCACCTT................................................... 22 2 1 1.00 1 1 0 0 0
.............................................................................................AATCGTATAGCTTTTCCCCT.................................................... 20 1 1 1.00 1 1 0 0 0
..........................................................................................AGTAAGCGTATAGCTTTTCCCCTT................................................... 24 2 1 1.00 1 1 0 0 0
...................................................GGGGTAAACTGTACGTTATTTG............................................................................................ 22 3 1 1.00 1 0 1 0 0
..................................................GGGCTGAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAACTTTTCCCCGT................................................... 22 2 1 1.00 1 1 0 0 0
...................................................GGGTGAAACTGTACGTTATATGAA.......................................................................................... 24 2 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACATTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
............................................................................................TAAGAGTATAGCTTTTCCCCAT................................................... 22 2 1 1.00 1 0 0 1 0
..................................................GGGGTGAAACTGTACGTTATCTG............................................................................................ 23 1 1 1.00 1 0 0 1 0
..................................................GGGGTGAAACTGTTCGTTATAT............................................................................................. 22 1 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTTACA................................................ 25 1 1 1.00 1 1 0 0 0
..........................................................................................CCTAAGCGTATAGCTTTTCCCCTT................................................... 24 1 1 1.00 1 1 0 0 0
...................................................GGGGGAAACTGTACGTTATATG............................................................................................ 22 1 1 1.00 1 0 1 0 0
............................................................................................TTAGCGTATAGCTTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACCTTATATG............................................................................................ 23 1 1 1.00 1 0 0 1 0
.................................................CGGGGTGAAACTGTACGTTATATG............................................................................................ 24 1 1 1.00 1 0 1 0 0
.............................................................................................AAGAGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCA.................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCGTTTCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
..................................................GGGGTGAAACTGTACGTTATAAG............................................................................................ 23 1 1 1.00 1 0 0 1 0
..................................................GCGGTGAAACTGTACGTTATATG............................................................................................ 23 1 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCCTGGC................................................. 24 3 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTCTTCCCTTT................................................... 22 2 1 1.00 1 0 1 0 0
............................................................................................TAAGCGTATAGCTTTTCCCTA.................................................... 21 2 1 1.00 1 0 0 1 0
.............................................................................................AATCGTATAGCTTTTCCCCTTT.................................................. 22 2 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCATTTCCCCTT................................................... 22 1 1 1.00 1 1 0 0 0
............................................................................................TAAGCGTATAGCTTTCCCCCT.................................................... 21 1 1 1.00 1 1 0 0 0
...................................................GGGTGAAGCTGTACGTTATATG............................................................................................ 22 1 1 1.00 1 1 0 0 0
.............................................................................................TAGCGTATAGCTTTTCCCCTT................................................... 21 1 1 1.00 1 0 1 0 0
.............................................................................................AAGCGTATAGCTTTCCCCTT.................................................... 20 2 3 0.67 2 2 0 0 0
............................................................................................TAAGCGTATAGTTTTCCACCTT................................................... 22 3 3 0.33 1 1 0 0 0
...................AGAATTTGGACAAACTTGCTC............................................................................................................................. 21 3 6 0.33 2 0 0 0 2
.....................AATTTGGACAAACTTGCTC............................................................................................................................. 19 2 3 0.33 1 0 0 0 1
.............................................................................................AAGCGTATCGATTTTCCCCGT................................................... 21 3 6 0.17 1 1 0 0 0
..................................................................................................................................................TTCATTCGCAGAGTGTAA. 18 2 8 0.13 1 1 0 0 0
.................GGAGAATTTGGACAAAATTG................................................................................................................................ 20 3 20 0.10 2 1 0 0 1
....................GAATCTGGACAAACTTGGTC............................................................................................................................. 20 3 12 0.08 1 0 0 0 1
..............................................................................................TAAGTATAGCTTTTCCCCTT................................................... 20 3 18 0.06 1 1 0 0 0
.............................................................................................................................................TGGTAATCATTCGCAGAGT..... 19 3 20 0.05 1 0 0 1 0
......................ATTTGGACAAACTTGCTCAT........................................................................................................................... 20 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

CTAAGTTTTATAATGAACATGTTAGACCTGTTTTAACGAGTTGTAAAACCCCCCACTTTGACATGCAATATACACGGGAAGACACTTTAAGTATTCGCATATCGAAAAGGGGAATTTTCAATCTCGATGACGTTGCTTTTCACCAAAAGTAAGTGTCTCATATTT

************************************.(((((((.((((((((((.(((.(((((((((.((((.................))))))))))))).))).))))))))))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 M054

female body

 V113

male body		 V114

embryo
.........................................................................ACGGGAAGACACTTTAAGT......................................................................... 19 0 1 2.00 2 2 0 0 0
.........................................................................TCGGGAAGACACTTTAAGT......................................................................... 19 1 1 1.00 1 0 1 0 0
......................................................................................................CGAAAAGGTGAATTATCAA............................................ 19 2 4 0.25 1 0 0 1 0
...............................................AGCTCCCACTTTGGCATGC................................................................................................... 19 3 7 0.14 1 0 0 0 1
..............GGACATGTTCGACCTGTTTG................................................................................................................................... 20 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_14:240971-241135 - dse_32 confident GATTCAAAA---T-ATTACTTG---TACA-A--------T------C-----------------------------------------------TGGA--CAAAATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAACG--AA---------A-AGTGGTTTT-CATTCACAGAG-TA------------------------------------------------------------TAAA
droSim2 2l:229245-229409 - dsi-mir-965 Known_mirbase GAATCAAAA---T-ATTACTTG---TACA-A--------T------C-----------------------------------------------TGGA--CAAAATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAACG--AA---------A-AGTGGTTTT-CATTCATAGAG-TA------------------------------------------------------------TAAA
dm3 chr2L:243004-243168 - dme-mir-965 Known_mirbase GAATCAAAA---T-AATAATTG---TACA-A--------T------C-----------------------------------------------TGGA--CAATATTGCTCAACA-TTTTGGGGGGTAAAACTGTACGTTATATGTGCCCTTCT-GTGATATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTATTGCAACG--AA---------A-AGTGTTTTT-CATTCATAGAG-TA------------------------------------------------------------TAAA
droEre2 scaffold_4929:289321-289484 - der_40 confident AAATCAAAG---T-ATTACTTG---TAGA-A--------C------C-----------------------------------------------T-GA--CAAAATTGCTCAACA-TTTTAGGGGGTGAAACTGTACGTTATATGTGTCCTTCT-GTAAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTACAGCAACAGCAACA--AA---------A-AGTGAATCT-TATTCATAGAG-TA------------------------------------------------------------CAAA
droYak3 2L:236024-236192 - dya_28 confident AAATCAAAA---T-ATTAATTG---TACA-A--------TCACCATC-----------------------------------------------T-GA--CAAAATTGCTCAACA-TTTTAGGGGGTTAAACTGTACGTTATATGTGCCCTTTT-GT-AAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAACAGCAACA--AA---------T-AGTGTATTT-CATTCATAGAT-TA------------------------------------------------------------TAAA
droEug1 scf7180000409461:574428-574586 + ATAA--------T-AATTTTTTT--GAGA-A--------C------C-----------------------------------------------T-GA--CAATATTGCTCAACA-TTTTAGGGGGTTAAACTGTACGTTATATGTGCTATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAAAGCAACAGCAGCA--AA---------A-AGTGTTTTT-AATTTA-AGGT-CA------------------------------------------------------------TGTA
droBia1 scf7180000301547:14030-14227 + ATTC--AAA---T-GCCACTTG---TGCC-A--------T------C--------------------------------------------------A--CGATATTGCCCGACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAGAAGTTGGTGCAACAGCAACG--AC-----------CGTGTGATA-AATTGTAGGAG-TA------TATGTTCTTTTA--TGA-------TCATT-CAACCACACATCTAGA-----TTATGTT
droTak1 scf7180000413017:293117-293276 + TTAACCAAA---T-GTTACTTT---TACA-A--------T------C-----------------------------------------------T-GA--CAATATTGCTTAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAAAAGCAACA--GA---------A-AGTATGATT-AATTGTAAGAA-TA----------------------------------------------------------------
droEle1 scf7180000490454:128303-128501 + AAATTTAAA---T-ATTAGTTT---TACA-A--------C------C-----------------------------------------------T-GA--CAATATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAACA--AA---------A-A------TA-AATTGTAAGAG-TAAAACAATGCGTTCTATTA--TAAAAGTGCCTTAAT-----------ACT-AA-----TTATTAT
droRho1 scf7180000779252:272985-273151 - ATTTTAATTTTAT-ATTCCTTT---TACA-A--------C------C-----------------------------------------------T-GA--GAATATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTGTATGTGTCATTCT-TTAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAACA--AA---------A-AGGAT-GATAATTCGTCAGAG-TA------------------------------------------------------------AAAC
droFic1 scf7180000453904:509750-509940 - GGTGTTTCG---T-TTTT---TTCGAACG-GTGTAAAAGC------C----------------------AA-----------------------A-GA--TTTTATTGCTCAACA-TTTTGAGGGGTGAAACTGTACGTTGTATGTGCCCTATT-ATAAAAACCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACACCAACA--AA---------A-AGTGACC------------GA-TA--------------------------------AATAATCTCTAAAAATTCGAAAAACTTCTGAA
droKik1 scf7180000302401:552890-553110 - GTCC--AAA---TTGCAGCTAA---TGTG----------T------T-----------------------ATGATATAT---AAATAGAATGAAT-AA--TATTATTGCTCATCA-TTTTGGGGGGTCAAACTGTACGTTATATGTGCCAATCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACAACAACG--AA---------AAAGTGTAATA-A-TTTAAAAAGTTA------TA--ATAATTTAATTGG-------TAAAT-CTCTCAGAAAATTAGGA-------TAGA
droAna3 scaffold_12943:4147941-4148088 + dan_29 confident ACTTAAAGA---T-ATGGGTTT---T--------------------C-----------------------------------------------TGGA--------AGCTCAACCCTTTTGGGGGGTCAAACTGTACGTTCTATGTGGCAATCT-TAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGTCAACA--AATCTCAACTAA-AGTGTTTT------------------------------------------------------------------------------AG
droBip1 scf7180000395973:371186-371397 + AATCATTAA---T-TAGT---TTTTATAG-CTTTTCAAGC------CTTGATTTTATCTTCTATATATACTATATA---GTCTAGTAGTATTAAT-GA--CAATATTGCTCAACC-ATTTGGGGGGTCAAACTGTACGTTGTATGTGCCAAACT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGCCAGCA--AT-----------------TGT-CAACAACAGAG-TG----------TT-----------------------------------------------AAAAA
dp5 4_group1:4362139-4362262 + dps-mir-965 Known_mirbase GACCCAAAA---T-C---ATTT---CCCC-A--------T------C-----------------------------------------------------------TGCTCAAAA-ATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAACA--A----------------------------------------------------------------------------------------------------
droPer2 scaffold_5:848178-848279 - dpe_62 confident ----------------------------------------------------------------------------------------------------------TGCTCAAAA-ATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAACA--A----------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004577:130100-130261 - dwi_42 confident AATGTTAAG---T-TAA---------------GAATAAAC------A----------------------AAAGATT---ATGTAATAA-ATTAAA-GAATCAATTCTACACAACA-T-TTATGGGGTTAAACTGTACGTTGTATGTGCAAATCTTAAGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGTTAAATCAACA--A----------------------------------TG------------------------------------------------------------TAAA
droVir3 scaffold_12963:8856425-8856513 + dvi-mir-965 Known_mirbase ---------------------------------------------------------------------------------------------------------------------TTTAGGGGGTCAAACTGTACGTTGTATGTGCAAAT-G-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAACGTTGATGTGACGACAAC--------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:2474474-2474626 - dmo_41 confident GATTCACAA---G--ATATTTT---AACAAA--------T------G-----------------------------------------------T-GA--ACAAAACACTCAAAT-GTTTAGGGGGTCAAACTGTACGTTGTATGTGTAA-ACA-ATGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGGAATCAACA--GC---------A-ATTT-------A-----AGCA-TA--------------------------------G---------------------------CTAC
droGri2 scaffold_15252:12933993-12934109 - dgr_17 confident G-----------------------------------------------------------------------------------------------GA--AAATAACACTCAAAT-GTTTAGGGGGTCAAACTGTACGTTATATGTGTAAAT-G-AAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGATAGCAACCTAAA---------A-AGT-------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GATTCAAAA---T-ATTACTTG---TACA-A--------T------C-----------------------------------------------TGGA--CAAAATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAACG--AA---------A-AGTGGTTTT-CATTCACAGAG-TA------------------------------------------------------------TAAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2217805.0078056950138385332
..........................................................................................................................GGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................2311036.00103614499485308
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................211978.009787652549139
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231365.0036531871624
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211337.00337328027
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201123.00123119031
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201106.00106850714
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................23155.005550131
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20135.003535000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22123.002322001
..........................................................................................................................GGGGTGAAACTGTACGTTATAT........................................................................................................................................................................22122.002242115
...........................................................................................................................GGGTGAAACTGTACGTTATATG.......................................................................................................................................................................22120.002017021
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24119.001918010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23114.001414000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................19112.001212000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23112.001212000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22111.001110001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................22110.00106040
..........................................................................................................................GGGGTGAAACTGTACGTTATA.........................................................................................................................................................................2119.0095130
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................2319.0098001
.........................................................................................................................GGGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................2419.0094032
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1818.0086110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2516.0065010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2215.0055000
............................................................................................................................GGTGAAACTGTACGTTATATG.......................................................................................................................................................................2115.0054010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2415.0053110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1915.0055000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGA......................................................................................................................................................................2414.0041120
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................2114.0044000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................1914.0042002
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT............................................................................................................................2314.0044000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2113.0033000
.................................................................................................................................................TGCCCTTCT-GTGAAATTCA...................................................................................................................................................1913.0033000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2513.0033000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1913.0033000
..........................................................................................................................GGGGTGAAACTGTACGTTA...........................................................................................................................................................................1912.0020011
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2412.0021100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...........................................................................................................................2412.0022000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTGT..........................................................................................................................2512.0020200
..........................................................................................................................GGGGTGAAACTGTACGTTAT..........................................................................................................................................................................2012.0020020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................2012.0021001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2612.0022000
.................................................................................................................................................TGCCCTTCT-GTGAAATTC....................................................................................................................................................1812.0020020
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2312.0021001
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTGCC...................................................................................................................................................................2712.0021010
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTG.............................................................................................................................2112.0022000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAACC.........................................................................................................................2612.0020110
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1912.0021001
..........................................................................................................................GGGGTGAAACTGTACGTT............................................................................................................................................................................1812.0020020
...........................................................................................................................GGGTGAAACTGTACGTTATAT........................................................................................................................................................................2111.0011000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2211.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCG...............................................................................................................................2011.0011000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTG.....................................................................................................................................................................2511.0010001
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTG.............................................................................................................................2011.0011000
..........................................................................................................................GGGGTGAAACTGTACGTTATATT.......................................................................................................................................................................2311.0010010
...........................................................................................................................GGGTGAAACTGTACGTTATATC.......................................................................................................................................................................2211.0011000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCC...............................................................................................................................1811.0011000
.........................................................................................................................GGGGGTGAAACTGTACGTTAT..........................................................................................................................................................................2111.0011000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1811.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..........................................................................................................................2511.0010001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT............................................................................................................................2311.0011000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTC.............................................................................................................................2111.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..........................................................................................................................2511.0010100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT............................................................................................................................2311.0010001
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTT.....................................................................................................................................................................2511.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................2411.0010010
.........................................................................................................................GGGGGTGAAACTGTACGT.............................................................................................................................................................................1811.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...........................................................................................................................2411.0010001
........................................................................................................................................................................GCGTATAGCTTTTCCCCTTT............................................................................................................................2011.0011000
..........................................................................................................................GGGGTGAAACTGTACGTTATATC.......................................................................................................................................................................2311.0010100
...........................................................................................................................GGGTGAAACTGTACGTTATATGAA.....................................................................................................................................................................2411.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2111.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGGC...........................................................................................................................2411.0011000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCTA..............................................................................................................................2111.0010001
droSim2
GAATCAAAA---T-ATTACTTG---TACA-A--------T------C-----------------------------------------------TGGA--CAAAATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCCTTCT-GTGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTACTGCAACG--AA---------A-AGTGGTTTT-CATTCATAGAG-TA------------------------------------------------------------TAAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2213563.0035631174724561067410410843721642632753001
..........................................................................................................................GGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................2311610.0016102534626631615201110374364107116000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................211672.00672181322427517158192619312500000
..........................................................................................................................GGGGTGAAACTGTACGTTATAT........................................................................................................................................................................221283.0028363711181758425183716000
.................................................................................................................................................TGCCCTTCT-GTGAAATTCAA..................................................................................................................................................201153.00153000100332353421000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211137.001370001321100011100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231112.001120108500200211317000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201107.00107650242925115010001000
..........................................................................................................................GGGGTGAAACTGTACGTTATA.........................................................................................................................................................................21196.009610211164121210515125000
.....................................................................................................................................................................TAAGCGTATAGCTTTT...................................................................................................................................16190.0090000000000090000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................23152.00520001340631062611000
.....................................................................................................................................................................TAAGCGTATAGCTTT....................................................................................................................................15145.0045000000000045000000
.................................................................................................................................................TGCCCTTCT-GTGAAATTCA...................................................................................................................................................19144.0044406051526310200000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20140.0040000370100011000000
.................................................................................................................................................TGCCCTTCT-GTGAAATTC....................................................................................................................................................18130.003090500230830000000
..........................................................................................................................GGGGTGAAACTGTACGTTAT..........................................................................................................................................................................20128.002800102395005111000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................25124.0024000600007110000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................21124.0024222000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24123.002300023010582200000
...............................................................................................................................GAAACTGTACGTTATATG.......................................................................................................................................................................18123.0023421000000007000000
..........................................................................................................................................................................GTATAGCTTTTCCCCTT.............................................................................................................................17122.0022000000001120000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGA......................................................................................................................................................................24118.001810100071111302000
..........................................................................................................................GGGGTGAAACTGTACGTT............................................................................................................................................................................18118.001820012401008000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19116.001600034310302000000
.............................................................................................................................GTGAAACTGTACGTTATATG.......................................................................................................................................................................20115.0015010000000014000000
...........................................................................................................................GGGTGAAACTGTACGTTATATG.......................................................................................................................................................................22113.001300620101001011000
..........................................................................................................................GGGGTGAAACTGTACGTTA...........................................................................................................................................................................19113.001300102411002200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24113.001300090000000004000
.................................................................................................................................................TGCCCTTCT-GTGAAATT.....................................................................................................................................................17112.001200000017040000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................18112.001200006400002000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATT.......................................................................................................................................................................23111.001100100010001800000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................26110.001000020000340100000
.........................................................................................................................GGGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................24110.001010410000001210000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................2219.00900040000230000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................2019.00900090000000000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGAA.....................................................................................................................................................................2518.00800000044000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................2118.00841030000000000000
..............................................................................................................................TGAAACTGTACGTTATATG.......................................................................................................................................................................1917.00721300000001000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGT......................................................................................................................................................................2416.00600000100001202000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1915.00500040000001000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2315.00500040000000010000
...........................................................................................................................................................................TATAGCTTTTCCCCTT.............................................................................................................................1615.00500000000005000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1814.00411010000001000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................2314.00400030000001000000
.................................................................................................................................................TGCCCTTCT-GTGAAA.......................................................................................................................................................1514.00400000012010000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................2214.00400040000000000000
..........................................................................................................................GGGGTGAAACTGTACGT.............................................................................................................................................................................1714.00400000000004000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATC.......................................................................................................................................................................2314.00400200000002000000
..........................................................................................................................................................................GTATAGCTTTTCCCCT..............................................................................................................................1614.00400000000004000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1913.00300020000001000000
..........................................................................................................................GGGGTGAAACTGTACGTTATAA........................................................................................................................................................................2213.00300000000001002000
..........................................................................................................................GGGGTGAAACTGTACG..............................................................................................................................................................................1623.00600000000006000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................2213.00300020000001000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCT..............................................................................................................................1713.00300000000003000000
.............................................................................................................................GTGAAACTGTACGTTATAT........................................................................................................................................................................1912.00200000000001100000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGAAA....................................................................................................................................................................2612.00200000000000011000
............................................................................................................................GGTGAAACTGTACGTTATATG.......................................................................................................................................................................2112.00200010000001000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................2312.00200010000000100000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTG............................................................................................................................2212.00200020000000000000
.................................................................................................................................................TGCCCTTCT-GTGAAATTA....................................................................................................................................................1812.00200000000200000000
.........................TACA-A--------T------C-----------------------------------------------TGGA--CAAAATTGCT..........................................................................................................................................................................................................2112.00220000000000000000
.........................................................................................................................GGGGGTGAAACTGTACGTTATAT........................................................................................................................................................................2312.00200000020000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................2012.00200000000110000000
.................................................................................................................................................TGCCCTTCT-GTGAAAT......................................................................................................................................................1612.00200000001100000000
............................................................................................................................................................................ATAGCTTTTCCCCTT.............................................................................................................................1512.00200000000002000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1912.00200020000000000000
.................................................................................................................................AACTGTACGTTATATG.......................................................................................................................................................................1612.00200000000002000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2112.00200000000110000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGAT.....................................................................................................................................................................2512.00200000000000002000
.............................................................................................................................GTGAAACTGTACGTT............................................................................................................................................................................1512.00200000000002000000
................................................................................................................................AAACTGTACGTTATATG.......................................................................................................................................................................1712.00200000000101000000
.........................................................................................................................GGGGGTGAAACTGTACGTTATA.........................................................................................................................................................................2212.00200000000000020000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCA................................................................................................................................1911.00100000000100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT............................................................................................................................2311.00100000000001000000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTA............................................................................................................................1811.00110000000000000000
..........................................................................................................................GGGGTGAAACTGTACGTTATAAAG......................................................................................................................................................................2411.00100000001000000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTAAG...................................................................................................................................................................2711.00100000001000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTG.............................................................................................................................2111.00100010000000000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTGC....................................................................................................................................................................2611.00100000010000000000
.........................................................................................................................GGGGGTGAAACTGTACGTTATATGAA.....................................................................................................................................................................2611.00100000000000001000
...........................................................................................................................................................................TATAGCTTTTCCCCT..............................................................................................................................1511.00100000000001000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTGCCC..................................................................................................................................................................2811.00101000000000000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................1811.00100010000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA.......................................................................................................................2811.00100010000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTG..................................................................................................................................1721.00200000000002000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................2711.00100010000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAAA.............................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCAA...............................................................................................................................2011.00100000000010000000
...............................................................................................................................GAAACTGTACGTTATAT........................................................................................................................................................................1711.00100000010000000000
...............................................................................................................................GAAACTGTACGTTATA.........................................................................................................................................................................1611.00100000010000000000
..................................................................................................................................ACTGTACGTTATATG.......................................................................................................................................................................1511.00100000000001000000
....................................................................................................CAAAATTGCTCAACA-TTTTGG..............................................................................................................................................................................................2111.00100010000000000000
.........................................................................................................................GGGGGTGAAACTGTACGTT............................................................................................................................................................................1911.00100001000000000000
......................................................................................................................................................TTCT-GTGAAATTCATAAGCGTATAGC.......................................................................................................................................2611.00100010000000000000
................................................................................................................................AAACTGTACGTTATA.........................................................................................................................................................................1511.00100000001000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCCC.............................................................................................................................2211.00100000000001000000
..........................................................................................................................GGGGTGAAACTGTACGTTATAAA.......................................................................................................................................................................2311.00100000000010000000
..............................................................................................................................TGAAACTGTACGTTATA.........................................................................................................................................................................1711.00100000000001000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTAA...........................................................................................................................2011.00100000000001000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTG.....................................................................................................................................................................2511.00100000000000100000
...........................................................................................................................GGGTGAAACTGTACGTTATAT........................................................................................................................................................................2111.00100000100000000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGC......................................................................................................................................................................2411.00110000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAA..............................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2521.00200010000000001000
dm3
GAATCAAAA---T-AATAATTG---TACA-A--------T------C-----------------------------------------------TGGA--CAATATTGCTCAACA-TTTTGGGGGGTAAAACTGTACGTTATATGTGCCCTTCT-GTGATATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAGAGCTATTGCAACG--AA---------A-AGTGTTTTT-CATTCATAGAG-TA------------------------------------------------------------TAAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................221132319.001323190000167216338512211100000123133894078784247680798545216397179219356198260489183296271121213307445440262179000901000000000000000000549555504412407559192942835207134442122231009821121282128146717530361129105376312361468222181398921043117122217122361682123441302107268160962200001216320625556681410034817515715835889193177134121004253112623240125634282867021392010514890517254612061028681060953551611190140192116133000690214500000123127000080409312203157816425710243151584413053773444425942876131224610000137123372513448931149532816444555772406691642412227347564563218654213166241351178187223627505005568216320341386659153812432111407591277721708076654271795306597851397301130102992792253177603569351392625510581439153134405568290311181436454131310716813852668363102103380499441115
..........................................................................................................................GGGGTAAAACTGTACGTTATATG.......................................................................................................................................................................23130100.003010000001231711124190000104172001382133727139915617418151581375122313166000000000000000000000002128211433308630317110694561989917111910025223242511164171201367192513514146281768935114171016341363533154510000102101052012065311261362015172720101240171817997116010517844843883271475417716307370931581312120103040200811000200713711308211101565490106014191471478147287728812132701000127154206715021771212243148562971331081155799628613810287256370125204109454857250109811370611366078767520412178829612337340291792812446046137215071926803194762651861300127196151167110677127731622016811711105139662424412433340
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................21120267.002026700001202320201000000911125002920590127101254927224112277321303210243061702320000001000000000000000006156214673896191039151255562327112341918018146041691713702103748491132714114820030615016413186850000000000283616101113302518986625191500100183143109513199480427023612811426941156119514046167301982919321000080690000051200005032523311816510711019725152713016011220128040251000091593768128160514965711036129271662426767834477340476218369434831058319337021811926198166532163161302929268512196412822277212016712603859213101678709548313616614221181333142430264431189111413412732193180
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2316305.006305000000003000000000003519100200000001410225481058328881143000000000000000000000002832752341982303382203800551556200031458178811731532929333112293241301010140423492300000000002221603562418352400000251104135692720850020430351392561074105455650005020000001020000062261828915438423152182219342710218000002013826113591759644671058454875302859325412151422151581014458565543372727223551839114322259233177922162544320131274021430515121201512155434751615392
..........................................................................................................................GGGGTAAAACTGTACGTTATAT........................................................................................................................................................................2213327.0033270000000000000000000003100010005140011000020001200310010000000000000000000000031212231037435175330020031110143190193431100005006331205004805311500000010100000000000000000000020000011170130110170511684080100018012000030000020010000000715164123188123819623780232228130021550000100605101131000112110233533652714302643330168521749244284533517200210313162380152020910414441215222920201000035236200
..........................................................................................................................GGGGTAAAACTGTACGTTATA.........................................................................................................................................................................2112733.00273300000000001000000000001000014018022000100000010010002000000000000000000000003742302210022314100100030010024019818000000000212001100110002221000000030001000000000000000115010100513062121121411513600160500000000000400000000000050357131179195164512658706534670000010501028363210041018851513491189383318149421261135369600515626110241501248031814129011944348799441412741915261010102241002171421762370
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................2011820.0018200000000000000000000041100012201217007929811733281419410102435000000000000000000000001131281017210070000001010102000140722311001200501220000000324221802300000026023011211405000000040501183837021023180132412006232017725300010100000011000000259813535313383421240012000010535222142712485182232391350221502123072825112401242150294102812102483001253800110131511010010021001005302342332060
.........................................................................................................................GGGGGTAAAACTGTACGTTATATG.......................................................................................................................................................................2411688.00168800004005000001000000100000022312100000000100010100220000000000000000000000000000011100021000000340102300310104000000010120000010130100000000000020003010105540000000010021013212312355400000210240000010000001200000014111061249232864502845277321300000104067612120446552044332107262314723530016166716718914241211457593141221247416045011338554143221219729143897100384330411111438180
.................................................................................................................................................TGCCCTTCT-GTGATATTCA...................................................................................................................................................1911353.001353000000000000000000000000000228000000220000010020110010000000000000000000000006541233127820163960111017311210108981142848325827428110010100000001000000000001100038350010000000041317020010020208373420417030006000000000010000000000100000000007540219328616014684133000011001000000000541971101101001710000000000003100201780000000000000205000000000000000100000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................2311207.00120700001000100301000000002000000012110001255323101084210612000000000000000000000002924141018063342000004422003741713398400910117011100055100191278000000000001104111222040000000121000047420280091101202301812000001923810000110000002200000020013100110152527155151820112125000116315611141651117572110442101611222205110014130371688169402007911002020621810000201111001331030011350
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................191870.0087000000000000000000000000000091994447102001011001110000000000000000000000000000111107765500000010000010000000001553200010020092300000016180259224500000500000010000002000000070000117045101494214011007106001000000000000000000000000422100110000200200000010010100100100200101101105041202000100021300303400000100100000000001000000000001000000004000
..........................................................................................................................GGGGTAAAACTGTACGTTAT..........................................................................................................................................................................201818.00818000000000000000000000200000000000027000000000010000000000000000000000000000001619131606009017101101100000300161125505010020017030100020310100000000000000000000000000113031000250100051002070000005000000000000000000000000850110023111625309181812009000000000329110000211002412593101262917632105092823210611008010430132211004261055041201723010000000473220
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211779.007790000001000000000000010200000000000010000201011001210100000000000000000000000161210160100207600000000000000014111522220000200640003000203400000000000100200101000000000010140228734604010111201203002700360018000100000000000000000000030050143410202134140000011006316322513117210685101106311658118020215910128012301002116110000167000100000001000001001010320
..........................................................................................................................GGGGTAAAACTGTACGTTATATGT......................................................................................................................................................................241328.00328000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000802000000000000000000001000000000000000010000000000000000000000000000000042002000000000000000000000000000200000018859143811100001000000011320000201100221111101021201001001011212100010010100301110003701262652312426010010004231247130
..........................................................................................................................GGGGTAAAACTGTACGTTATATT.......................................................................................................................................................................231314.003140000000000000000000000000010000000000000121000000020000000000000000000000000100001529120401090000000000000251000000011040010120101200000000000010003000100010000010200002000001001102000000200000000000000000000000012000101030000090050000000140410742000323213009018511103423580010000010202100003000001000230001000300000200000000000010000
..........................................................................................................................GGGGTAAAACTGTACGTTA...........................................................................................................................................................................191312.0031200000000000000000000100000000000000000000000000000000000000000000000000000004724020000200000000000010000010000000000010000000000200000000000000000000000000000202000000402010110012310003000000000000000000000000000020000911331637115000010000306100002230115310810113503821207011271232320011000100150111100486141002814021100000001142960
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................221304.003040000200120010300000000117000000000000120001400011111000000000000000000000000042420410101020010900700130000401008300302200020003053000000000023000001000010000000012000093050014020101000050089013000030100000001000000000111103251211100000000103002211903011000201100201020001140008120200102631000101100000000400000000000000000000000000
.........................................................................................................................GGGGGTAAAACTGTACGTTATA.........................................................................................................................................................................221281.00281000000000000000000000000001000000010000000000000000010000000000000000000000011220000000000000000000000030000000000000000010000001000000000000050001000100000000000100000010100000200000000001000000000000000000000111101200203252236012000000000022100002220102011600101600000300250752178210010107023000700510130066021033211200220000061230
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................221262.002620000001001000000000010100000000000000000000020102000200000000000000000000000851521001010500400100000102221200000000030010010071500000000000100001000000000000000000817708000102030200010023000000000000000000000000200310001100012400100000001152521200202000313202636053111030001000454521232100002110000110210000110000000000000010210
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................241260.002600000000010010000000000000000000000010213221001112311100000000000000000000000251209142051000001313100000035704401200500100000000001000000000011204100000003200000000000610400020007030000003326100000100000050000000000111023445012100200000012100123103001100010000003013000030011011230021416000023300000001600000001000000000010000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................231252.00252000000000000000000000000000000000000101210301001102100000000000000000000000099102000010200000020100000000461000000110420000000107000000000000007000000100000000000006021010002000000000000220010000001000000000000000237001525125150110100101215311511043051000101001030122251000001110240322000000002201010022300100100000000000011000110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................241252.00252000000000000000000000000000000000000001000001010000000000000000000000000000012116150010000200000011000000041113100000300000000000102100000000000000001000000000000000020011000020000204000000010100000000000001100000020005001101010070014000000002183662703535010700110207030223000000000610521430000220000000001100200000000000000000102002
..........................................................................................................................GGGGTAAAACTGTACGTTATATGA......................................................................................................................................................................241246.002460000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000100000000240000000000000000010000000000010000000000000000000000000000001102000101030200000000000000000000000000000000002100148913781741100106100000000411000010120001021001100110100011601000110000200000130202001801142100020115000100000721350
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTATC..........................................................................................................................251234.002340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................181217.0021700000000000000000000000000011001000000000000000000000000000000000000000000003746313400000140000010000100000117820600000000000000000103000100000000000000000000000000000000120201010010000005001011000000000000000000000000010000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................231181.0018100000000000000000000000000100000000120000011010001200000000000000000000000002710610000000000100000000000112000000000000000000021300000000000000000100030002000000000003100004200030000000016202000000100000000000000000120002121011400000000000310234402000000211000110010100020200050210253840000002101000002000000200100000510010000110
..........................................................................................................................GGGGTAAAACTGTACGTT............................................................................................................................................................................181175.001750000000000000000000000000000312000000000000100000000000000000000000000000000101100000001000000010000000037300000000010000000006010032100002000000000000000002101000000300000012400100000000000000000001300000000007200000603412102003000000100000000000022002210110001210174031300021203110100000510311040022101000000000000000000124100
.................................................................................................................................................TGCCCTTCT-GTGATATTCAA..................................................................................................................................................201175.00175000000100000000000000000000000000000000000000100011000000000000000000000000000100505150000010000000000010000000100100000000000000000000000000002120010010000000000000000000000010000000001000000000000000000000000000000027143121161833000010000000000000000000000000000000000000000202000000000001000000000000000002000000000000000000000000
.........................................................................................................................GGGGGTAAAACTGTACGTTATAT........................................................................................................................................................................231161.001610000000000000000000000000010000000000000000000000000100000000000000000000000130104003000000000000000000410000000000001000000000010000000000000000000000000000000000000101000001000300000010000000000000000000000000000000957117276300800000000010000000000000003011003012110050015550201001004200200000020004100110040400100000000011010
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201149.00149000001000000000000000000000000000000000100000000110000000000000000000000000034131000301121020000120010100151511000001100000000300010000000000000000000000100000000004000740200010002000000001000000000020000000000000000101110220000000000001001011100101102000100002001020022040001110100102100000000000000010000200000000000020000010010
.................................................................................................................................................TGCCCTTCT-GTGATATTC....................................................................................................................................................181116.001160000000000000000000000000000000000000000000100000000000000000000000000000000242008152610000000110100030166213014002010000000000000000000000000000001000000000000000000000000101011060000000000000000000000000000000004000101000005014000000000000000000100110000000001001020000000000201000012000000100000010000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................221111.001110000020000000000000000010000000000001000000000000000100000000000000000000000431500000000400000000001000000100001000000000110000000000000000100000000010000000000000004102000000017090000006000000000000000010000000000110000100100100100000000010412101000001001000101011010000000000111433400000000000000000100000000000000000000000010
..........................................................................................................................GGGGTAAAACTGTACGTTATATA.......................................................................................................................................................................231106.00106000000120100000000000000010000000000100000100000000000000000000000000000000010000100001000110001000000000400000000100000000100000000000000000000010000000000000000000000010020002010000000000000000000000001000000000000013313113315200100000000000100000101000010010000100000010003030002000001000100000000011100100000300000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................25185.0085000000000000000000000110000000000000010202000000001000000000000000000000000011200300030000000001100000000031000000100000000000000000000000004201003000200000000000000020100000000000000000200100000000000020000000000100001315313000000000000000000000000000000000000000000050004010000000001000010201000000410000000000000002000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20172.0072000000000000010000000100000000000000000000000000000000000000000000000000000011010000000000000000000000005620000000002000000000000000000000000000000000000000000000010850400020302020020102000000000000000000000000000000001000001100000000010100000000010000000000000000010010011021000001200000000000000011000000000010000000000001000
..........................................................................................................................GGGGTAAAACTGTACGTTATAA........................................................................................................................................................................22161.00610000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000001100001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020413013400200000000000000000000000020001000010000000001010002000000000311000020001200000030100000000000010110
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18160.0060000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010400000000000003000000010600000000000000000000000000000000000000000000000000110000100000000003101230000000000000000000000001000000000000000000000000000000000000020000000000010010130001100810001111200300100000000000100000000000000000000000
...........................................................................................................................GGGTAAAACTGTACGTTATATG.......................................................................................................................................................................22160.0060000000000000100000100000000000000000000000000000000000000000000000000000000000000000002101000000000000001000000000000000000100000000000000000000000000000000000000000100010030100100015000000000000000000000000000000000062171060100100000000000000000000010000000100030011000000000000000002000000100010000100000100010000000000000000
.........................................................................................................................GGGGGTAAAACTGTACGTTAT..........................................................................................................................................................................21158.0058000000000000000000000000000000000030000000000000000000000000000000000000000012000000000000000010000010010000000000000000000000000000000000000000000000000000000000000000000111000200000002000000000000000000000000001020012002000200100000000000000000000000000010000210021000001010002000000000110100020001610110120200000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23155.0055000001000000000000000000000000000000000000000000000000000000000000000000000011010307900100000010000022083000000200000000000000000000000000000000000000000000000000100110000000100000000000000000000000000000000000000000001100000000000000000010000000001000001000000001001000000000000000010000000100000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................24146.0046000000000000000000000000000000000000000000001001000000000000000000000000000024120000000000000000000000000200000000000000000101000000000000000000000000000000000000000100000000000010000000205000000200000010000000000010000100001100211000000001000202000001000000000000000010000000000000000000010200000000000000000000000100000000000
..........................................................................................................................GGGGTAAAACTGTACGTTATATC.......................................................................................................................................................................23146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000010011000000000000000000000000000000000000010210023000031000000000001000000120100000000001000000001000100110011000002000010000000200000100000000000022110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................21139.0039000000000000010000000010000000000000000000000000100000000000000000000000000012111000100010000000000000010100000000000000000001000000000000000000000000000300000000100200000010000000000001000000000000000000000000100000000000001000000000000000100001000000100000110010000010110000000010100000001000010000000000010000000000000001000
.........................................................................................................................GGGGGTAAAACTGTACGTTA...........................................................................................................................................................................20136.0036000000000000000000000000000010000050000000000000000000000000000000000000000001010000000000000000000000000300000000000000000000000000000000000000000000000000000000000010010000010000000000000000000000000000000000200000010000000100000000000010000000000000000100000001010020100000101110000000300001000000000100100001000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................21131.0031000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000001100000000000000000001000000000000000000000000000000000000000210000100002020000001000000000000000000000000000000000000001000000000000010200000001000000000000010000000000000210400200000000000000010000000000000000000000001000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22130.0030000000000000000000000000000000000000000000000001000000000000000000000000000010000300001000000000000000000200000000000000000101000000000000000000000000000000000000000010200000100000000000000000000000000000000000001010000000000000000000000010010000001000200000000210020010000000000000000000000000000001000000000000000000000001010
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19129.0029000000000000000000000000000000000000100000100000000000000000000000000000000001000000400000300000000000001500000100001000000000000000000000000000000000000000000000000200200000000000000000000000000000000000000000000000000010000000000000000001100000000000100000000000010000000001000010000000000000000000000000000000000000000000000
..........................................................................................................................GGGGTAAAACTGTACGTTATATGAA.....................................................................................................................................................................25128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000011020120100100000000000000000100000000000000001000000001000000000000000000200000010000100000600000000000021100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................21127.0027000000010000000000000000000000000000100000000100000300000000000000000000000000000000000000000000000000000200000000000000010000000000000000000000000000000000000100000210000000002000000000000000000100000000000000000100000000000000000000000000100000000000000000000000000010000001000001000000000000000000000110000000000200010000100
......................................................................................................ATATTGCTCAACA-TTTTGG..............................................................................................................................................................................................19123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000020203112200200000000000010000100000000000000001000000000000000000000000001000000010100000000000000000000001000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................20121.0021000010100000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000100000001000000001010000000000000000000000000000000000000000000020101000000000000000000000000000000000000000000010000000200000000000000000100000100000000010100000000000000000100000000000000000000000000000000000000000001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................26120.0020000000000000000000000000000000000000000003000100000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000110100000000000000000001100000000100000000100000002000000000
.............................................................................................................................GTAAAACTGTACGTTATATG.......................................................................................................................................................................20119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000011000000000000000000000000000000000000000000000010000000200000000010001000000000000000000000000000000000000000000010102000000000001000000000000000002000000100000000000000000
.........................................................................................................................GGGGGTAAAACTGTACGTTATATT.......................................................................................................................................................................24119.0019000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010200001100010002000000001000000000000010000000000001010010000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................25119.0019000000000000000000000000000000000000000100100000000000000000000000000000000000100000000000000000000000002000001000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020020001000000000000011000110000000000010000000000000000000000000000000000000010000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................24119.0019000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000010000110100100011000000010000100000000100000000020000000000000000001000000000000000000000000000000000000000000000
droEre2
AAATCAAAG---T-ATTACTTG---TAGA-A--------C------C-----------------------------------------------T-GA--CAAAATTGCTCAACA-TTTTAGGGGGTGAAACTGTACGTTATATGTGTCCTTCT-GTAAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTACAGCAACAGCAACA--AA---------A-AGTGAATCT-TATTCATAGAG-TA------------------------------------------------------------CAAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22114178.00141781287840013921314435054
..........................................................................................................................GGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................2311657.001657170222017213811350
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................2111610.00161011662351319401370
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211679.00679675111010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231515.00515453614581514
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201156.0015612419101110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................231102.0010288211640
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20178.007873400100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................21165.006516400000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20148.004846200000
..........................................................................................................................GGGGTGAAACTGTACGTTATATT.......................................................................................................................................................................23143.0043000280150
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................22143.004353701000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24141.004136004100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23135.003528010060
..........................................................................................................................GGGGTGAAACTGTACGTTATAT........................................................................................................................................................................22134.0034200124160
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................23131.003123510002
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24130.003029000100
...........................................................................................................................GGGTGAAACTGTACGTTATATG.......................................................................................................................................................................22122.002218000130
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22121.002120100000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22120.002020000000
..........................................................................................................................GGGGTGAAACTGTACGTTATA.........................................................................................................................................................................21116.00164105060
..........................................................................................................................GGGGTGAAACTGTACGTTATATA.......................................................................................................................................................................23116.001600010150
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23114.001414000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19114.00148110040
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................21111.001110000010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................25111.001111000000
.................................................................................................................................................TGTCCTTCT-GTAAAATTCA...................................................................................................................................................19110.00105210020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................24110.00109000100
..........................................................................................................................GGGGTGAAACTGTACGTTATATC.......................................................................................................................................................................23110.001000000100
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1919.0099000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1917.0076000100
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1817.0076000010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2216.0066000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2115.0055000000
.........................................................................................................................GGGGGTGAAACTGTACGTTATATG.......................................................................................................................................................................2415.0052000030
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2215.0055000000
..........................................................................................................................GGGGTGAAACTGTACGTTA...........................................................................................................................................................................1914.0041002010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................2714.0044000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1914.0044000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2213.0033000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTGTC...................................................................................................................................................................2713.0030000120
..........................................................................................................................GGGGTGAAACTGTACGTTATATGA......................................................................................................................................................................2413.0030101100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................2413.0033000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTG.....................................................................................................................................................................2512.0021000100
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2112.0022000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGG......................................................................................................................................................................2412.0021100000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTA............................................................................................................................2112.0021001000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2512.0022000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2612.0022000000
........................................................................................................................AGGGGGTGAAACTGTACGTTA...........................................................................................................................................................................2112.0020000020
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTC............................................................................................................................2212.0022000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2412.0022000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCC................................................................................................................................1811.0011000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA.......................................................................................................................2811.0011000000
.................................................................................................................................................TGTCCTTCT-GTAAAATTCAA..................................................................................................................................................2011.0011000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2111.0011000000
..........................................................................................................................GGGGTGAAACTGTACGTTATATGTGTCC..................................................................................................................................................................2811.0011000000
..........................................................................................................................GGGGTGAAACTGTACGTTAGG.........................................................................................................................................................................2111.0011000000
..........................................................................................................................GGGGTGAAACTGTACGTTATAC........................................................................................................................................................................2211.0010100000
..........................................................................................................................GGGGTGAAACTGTACGTTATG.........................................................................................................................................................................2111.0010100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCA................................................................................................................................1911.0011000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1911.0011000000
............................................................................................................................GGTGAAACTGTACGTTATATG.......................................................................................................................................................................2111.0011000000
droYak3
AAATCAAAA---T-ATTAATTG---TACA-A--------TCACCATC-----------------------------------------------T-GA--CAAAATTGCTCAACA-TTTTAGGGGGTTAAACTGTACGTTATATGTGCCCTTTT-GT-AAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAACAGCAACA--AA---------T-AGTGTATTT-CATTCATAGAT-TA------------------------------------------------------------TAAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22128054.002805442209148392112625254500077
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................2115995.0059951419023924164284130000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................2111568.00156801560601100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................2111086.00108601108500000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231983.00983086388871520000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................221631.0063101661500000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATG.......................................................................................................................................................................231398.003984313588100514120010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201355.003551161176141200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................231153.001530136453400001
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201135.001350134100000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................201122.001220117500000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................22157.0057055100100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................23147.00470128000000027
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23146.0046046000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22142.0042042000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24138.0038034110200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22136.0036028800000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24129.0029019630100000
..........................................................................................................................GGGGTTAAACTGTACGTTATA.........................................................................................................................................................................21128.0028917110000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................19127.0027025200000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18119.0019018100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23117.0017016001000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19114.001407600100000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19111.0011010100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................21111.0011001000100000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................19110.0010010000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2519.00907200000000
...........................................................................................................................GGGTTAAACTGTACGTTATATG.......................................................................................................................................................................2218.00807100000000
.........................................................................................................................GGGGGTTAAACTGTACGTTATATG.......................................................................................................................................................................2417.00713120000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2417.00705110000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2217.00707000000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2117.00707000000000
..........................................................................................................................GGGGTTAAACTGTACGTTAT..........................................................................................................................................................................2016.00601500000000
..........................................................................................................................GGGGTTAAACTGTACGTTATAT........................................................................................................................................................................2216.00600400020000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2416.00606000000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATGTGCCC..................................................................................................................................................................2815.00502300000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATT.......................................................................................................................................................................2315.00500041000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATGTGCC...................................................................................................................................................................2714.00431000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2614.00404000000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATGT......................................................................................................................................................................2414.00411010010000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2214.00404000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGT............................................................................................................................2313.00303000000000
.................................................................................................................................................TGCCCTTTT-GT-AAATTCA...................................................................................................................................................1813.00300120000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2113.00303000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2412.00202000000000
.................................................................................................................................................................TTCATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2612.00202000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA.......................................................................................................................2812.00202000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...........................................................................................................................2412.00202000000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTTT............................................................................................................................2012.00202000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................2412.00202000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2512.00202000000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................1812.00201100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................2412.00202000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2312.00202000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................2012.00201100000000
..........................................................................................................................GGGGTTAAACTGTACGTT............................................................................................................................................................................1812.00210100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...........................................................................................................................2412.00200101000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................1812.00202000000000
..........................................................................................................................GGGGTTAAACTGTACGTTATATGA......................................................................................................................................................................2412.00200110000000
......................................................................................................AAATTGCTCAACA-TTTTAG..............................................................................................................................................................................................1912.00201100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAC..............................................................................................................................2112.00200200000000
..................................................................................................................................................................TCATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2511.00101000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..........................................................................................................................2511.00101000000000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1821.00201100000000
droEug1
ATAA--------T-AATTTTTTT--GAGA-A--------C------C-----------------------------------------------T-GA--CAATATTGCTCAACA-TTTTAGGGGGTTAAACTGTACGTTATATGTGCTATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAAAGCAACAGCAGCA--AA---------A-AGTGTTTTT-AATTTA-AGGT-CA------------------------------------------------------------TGTASizeHit CountTotal NormTotal
No Reads
droBia1
ATTC--AAA---T-GCCACTTG---TGCC-A--------T------C--------------------------------------------------A--CGATATTGCCCGACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAGAAGTTGGTGCAACAGCAACG--AC-----------CGTGTGATA-AATTGTAGGAG-TA------TATGTTCTTTTA--TGA-------TCATT-CAACCACACATCTAGA-----TTATGTTSizeHit CountTotal NormTotal
No Reads
droTak1
TTAACCAAA---T-GTTACTTT---TACA-A--------T------C-----------------------------------------------T-GA--CAATATTGCTTAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAAAAGCAACA--GA---------A-AGTATGATT-AATTGTAAGAA-TA----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAATTTAAA---T-ATTAGTTT---TACA-A--------C------C-----------------------------------------------T-GA--CAATATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTATATGTGCCATTCT-ATAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAACA--AA---------A-A------TA-AATTGTAAGAG-TAAAACAATGCGTTCTATTA--TAAAAGTGCCTTAAT-----------ACT-AA-----TTATTATSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTTAATTTTAT-ATTCCTTT---TACA-A--------C------C-----------------------------------------------T-GA--GAATATTGCTCAACA-TTTTGGGGGGTGAAACTGTACGTTGTATGTGTCATTCT-TTAAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTAATGCAACAGCAACA--AA---------A-AGGAT-GATAATTCGTCAGAG-TA------------------------------------------------------------AAACSizeHit CountTotal NormTotal
No Reads
droFic1
GGTGTTTCG---T-TTTT---TTCGAACG-GTGTAAAAGC------C----------------------AA-----------------------A-GA--TTTTATTGCTCAACA-TTTTGAGGGGTGAAACTGTACGTTGTATGTGCCCTATT-ATAAAAACCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACACCAACA--AA---------A-AGTGACC------------GA-TA--------------------------------AATAATCTCTAAAAATTCGAAAAACTTCTGAASizeHit CountTotal NormTotal
No Reads
droKik1
GTCC--AAA---TTGCAGCTAA---TGTG----------T------T-----------------------ATGATATAT---AAATAGAATGAAT-AA--TATTATTGCTCATCA-TTTTGGGGGGTCAAACTGTACGTTATATGTGCCAATCT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGCAACAACAACG--AA---------AAAGTGTAATA-A-TTTAAAAAGTTA------TA--ATAATTTAATTGG-------TAAAT-CTCTCAGAAAATTAGGA-------TAGASizeHit CountTotal NormTotal
No Reads
droAna3
ACTTAAAGA---T-ATGGGTTT---T--------------------C-----------------------------------------------TGGA--------AGCTCAACCCTTTTGGGGGGTCAAACTGTACGTTCTATGTGGCAATCT-TAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGTCAACA--AATCTCAACTAA-AGTGTTTT------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2216151.0061513082228419735176161
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................2116036.0060363925348638130122
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................2111495.001495014940001
..........................................................................................................................GGGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2311065.0010653871616113632
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201901.0090122844513017
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231503.0050331710511391516
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................221286.0028612840100
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211189.00189172130121
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................191112.0011221070120
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................23197.0097166310602
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24164.00645120821
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22139.003911235000
...........................................................................................................................GGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................22135.00353500000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24133.00335226000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20133.00333120000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................23130.003011170101
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20128.002817100010
..........................................................................................................................GGGGTCAAACTGTACGTTCTAT........................................................................................................................................................................22121.00211510005
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23120.0020531416
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................21118.00182120004
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................25116.00161400110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22113.00131000201
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................21113.00130120010
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGT......................................................................................................................................................................24111.0011301007
.................................................................................................................................................TGGCAATCT-TAGAAATTCA...................................................................................................................................................1919.009213003
..........................................................................................................................GGGGTCAAACTGTACGTTCTATT.......................................................................................................................................................................2319.009003006
..........................................................................................................................GGGGTCAAACTGTACGTTCTA.........................................................................................................................................................................2119.009531000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCTC..............................................................................................................................2118.008080000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2218.008501200
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2518.008142010
............................................................................................................................GGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2116.006600000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................1816.006150000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................2416.006510000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2115.005500000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2415.005300110
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1914.004310000
..........................................................................................................................GGGGTCAAACTGTACGTTCT..........................................................................................................................................................................2014.004301000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................2014.004040000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................2414.004120100
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1914.004130000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGTG.....................................................................................................................................................................2513.003001002
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2213.003210000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..........................................................................................................................2512.002000020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2412.002200000
..........................................................................................................................GGGGTCAAACTGTACGTT............................................................................................................................................................................1812.002200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...........................................................................................................................2412.002200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................2412.002010100
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGA......................................................................................................................................................................2412.002200000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1812.002200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2612.002020000
..............................................C-----------------------------------------------TGGA--------AGCTCAACCCTTTTGG..............................................................................................................................................................................................2112.002200000
.................................................................................................................................................TGGCAATCT-TAGAAATTC....................................................................................................................................................1811.001000001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGTT...........................................................................................................................2411.001100000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGAA.....................................................................................................................................................................2511.001000001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCCA.............................................................................................................................2211.001100000
..........................................................................................................................GGGGTCAAACTGTACGTTC...........................................................................................................................................................................1911.001100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCTG..............................................................................................................................2111.001010000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1911.001000001
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCC..............................................................................................................................2011.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..........................................................................................................................2511.001100000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTC............................................................................................................................2211.001100000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1911.001010000
droBip1
AATCATTAA---T-TAGT---TTTTATAG-CTTTTCAAGC------CTTGATTTTATCTTCTATATATACTATATA---GTCTAGTAGTATTAAT-GA--CAATATTGCTCAACC-ATTTGGGGGGTCAAACTGTACGTTGTATGTGCCAAACT-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGCAAAGCCAGCA--AT-----------------TGT-CAACAACAGAG-TG----------TT-----------------------------------------------AAAAASizeHit CountTotal NormTotal
No Reads
dp5
GACCCAAAA---T-C---ATTT---CCCC-A--------T------C-----------------------------------------------------------TGCTCAAAA-ATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAACA--A----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22121772.0021772019177140246637920162313321
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................2116399.006399045811206504612220140
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2311334.0013340117372432787040
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................2111208.00120801189210131200
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201844.0084406749172240010
..........................................................................................................................GGGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................231798.00798042463687413930162
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................211473.0047300348125000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................221291.0029102021556000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................201234.00234022833000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................231186.0018601422051510300
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................221146.00146014112101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................241125.00125012101210000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24189.008908031500000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20166.006606310000020
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22160.006006000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................21150.005004401100400
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................25149.004904800100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................23147.0047027127010000
..........................................................................................................................GGGGTCAAACTGTACGTTCTA.........................................................................................................................................................................21146.0046013611005119
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................19142.004204101000000
...........................................................................................................................GGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................22137.003703700000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19132.003202263000001
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23132.003203011000000
..........................................................................................................................GGGGTCAAACTGTACGTTCTAT........................................................................................................................................................................22126.002601240201034
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................20118.001801800000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18117.001701600000001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23115.001501320000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................20114.00140923000000
..........................................................................................................................GGGGTCAAACTGTACGTTCT..........................................................................................................................................................................20113.00130520000024
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................25112.001201000100010
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19110.001001000000000
.................................................................................................................................................TGACAATAT-TCGAAATTCA...................................................................................................................................................19110.00100400510000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGA......................................................................................................................................................................2419.0090100100016
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2218.0080800000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1917.0070601000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT............................................................................................................................2316.0060510000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................2416.0060402000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2116.0060600000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...........................................................................................................................2415.0050104000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................2115.0050032000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2215.0050500000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2415.0050500000000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGT......................................................................................................................................................................2414.0040010101001
..........................................................................................................................GGGGTCAAACTGTACGTTC...........................................................................................................................................................................1914.0041010000002
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGTGA....................................................................................................................................................................2614.0040100000030
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTC.............................................................................................................................2113.0030210000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCC...............................................................................................................................2113.0030210000000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATT.......................................................................................................................................................................2313.0030000200001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAA..............................................................................................................................2113.0030300000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2613.0030300000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2313.0030300000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.............................................................................................................................2213.0030300000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................1813.0030201000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..........................................................................................................................2513.0030002010000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2113.0030210000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2213.0030300000000
..........................................................................................................................GGGGTCAAACTGTACGTTCTAC........................................................................................................................................................................2212.0020020000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2312.0020200000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..........................................................................................................................2512.0020110000000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1812.0020200000000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATC.......................................................................................................................................................................2312.0020010100000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGTGAC...................................................................................................................................................................2712.0020200000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCC..............................................................................................................................2012.0020002000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTTT............................................................................................................................2012.0020200000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCC...............................................................................................................................1812.0020200000000
.........................................................................................................................AGGGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2412.0020100100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAC.............................................................................................................................2212.0020110000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................2412.0020200000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAC..............................................................................................................................2112.0020020000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTAC............................................................................................................................2312.0020200000000
............................................................................................................................GGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2112.0020200000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................2712.0020200000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2411.0010100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGC............................................................................................................................2311.0010100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..........................................................................................................................2511.0010100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGG............................................................................................................................2311.0010100000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTC............................................................................................................................2211.0010100000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2511.0010100000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTG.............................................................................................................................2111.0010001000000
.............................................................................................................................GTCAAACTGTACGTTCTATG.......................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2411.0010100000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAC.........................................................................................................................2611.0010010000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1911.0010100000000
..............................................................................................................................................................AAATTCATAAGCGTATAGC.......................................................................................................................................1911.0010100000000
droPer2
----------------------------------------------------------------------------------------------------------TGCTCAAAA-ATTTGAGGGGTCAAACTGTACGTTCTATGTGACAATAT-TCGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAACTTGATGCAACAGCAACA--A----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2214561.0045610382119212339728
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................211729.0072956153186010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231264.002640212915262
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211190.0019001900000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................231158.00158515334668
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................20163.00630580230
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................23148.00480424020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22138.00380380000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24130.00300281010
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20129.00290280100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24117.00170150101
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................22114.00140140000
..........................................................................................................................GGGGTCAAACTGTACGTTCTA.........................................................................................................................................................................21114.00141220000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22113.00130130000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20110.00100100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................2217.007050011
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................2317.007050110
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2317.007070000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2516.006060000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2116.006060000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1916.006060000
.................................................................................................................................................TGACAATAT-TCGAAATTCA...................................................................................................................................................1916.006023010
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGA......................................................................................................................................................................2415.005320000
..........................................................................................................................GGGGTCAAACTGTACGTTCT..........................................................................................................................................................................2015.005410000
...........................................................................................................................GGGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2215.005050000
..........................................................................................................................GGGGTCAAACTGTACGTTCTAT........................................................................................................................................................................2214.004130000
..........................................................................................................................GGGGTCAAACTGTACGTTC...........................................................................................................................................................................1914.004400000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2113.003030000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................2313.003010110
.......................................................................................................................................................TAT-TCGAAATTCATAAGCGTATAGC.......................................................................................................................................2512.002000002
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2312.002020000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................2012.002020000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2612.002020000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2212.002020000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................1812.002200000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1812.002020000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1911.001001000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1911.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCT................................................................................................................................1911.001000010
............................................................................................................................GGTCAAACTGTACGTTCTATG.......................................................................................................................................................................2111.001010000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1911.001010000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGT......................................................................................................................................................................2411.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAC.............................................................................................................................2211.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2411.001010000
..........................................................................................................................GGGGTCAAACTGTACGTTCC..........................................................................................................................................................................2011.001100000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2411.001010000
...........................................................................................................................GGGTCAAACTGTACGTTCTAT........................................................................................................................................................................2111.001010000
...........................................................................................................................GGGTCAAACTGTACGTTCT..........................................................................................................................................................................1911.001100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................2111.001000010
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGTGAC...................................................................................................................................................................2711.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCT..........................................................................................................................2511.001001000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.............................................................................................................................2211.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2411.001010000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATT.......................................................................................................................................................................2311.001000100
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTAC............................................................................................................................2311.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC............................................................................................................................2311.001010000
..........................................................................................................................GGGGTCAAACTGTACGTTCTATGTG.....................................................................................................................................................................2511.001100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................1911.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT............................................................................................................................2311.001010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT............................................................................................................................2311.001000010
droWil2
AATGTTAAG---T-TAA---------------GAATAAAC------A----------------------AAAGATT---ATGTAATAA-ATTAAA-GAATCAATTCTACACAACA-T-TTATGGGGTTAAACTGTACGTTGTATGTGCAAATCTTAAGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGATGTTAAATCAACA--A----------------------------------TG------------------------------------------------------------TAAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22114373.001437351342576618249
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................2112197.00219745178715211139
..........................................................................................................................GGGGTTAAACTGTACGTTGTATG.......................................................................................................................................................................2312040.00204048127219784484
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231724.0072406935179
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211655.006550655000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201287.00287120923936
..........................................................................................................................GGGGTTAAACTGTACGTTGTAT........................................................................................................................................................................221159.001591010210433
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................231128.0012801101170
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201111.001110109101
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20179.0079079000
..........................................................................................................................GGGGTTAAACTGTACGTTGTA.........................................................................................................................................................................21167.00679513715
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24164.0064063001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................22162.0062056051
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................24155.00550380170
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................25136.0036030060
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18131.0031029011
..........................................................................................................................GGGGTTAAACTGTACGTTGTATGT......................................................................................................................................................................24130.0030131097
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22126.0026026000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23125.0025021112
...........................................................................................................................GGGTTAAACTGTACGTTGTATG.......................................................................................................................................................................22125.0025021031
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19122.0022019030
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23120.0020020000
..........................................................................................................................GGGGTTAAACTGTACGTTGTATGA......................................................................................................................................................................24119.0019200152
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19119.0019017011
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................19118.0018018000
.................................................................................................................................................TGCAAATCTTAAGAAATCCA...................................................................................................................................................20117.0017031103
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................23112.0012012000
..........................................................................................................................GGGGTTAAACTGTACGTTGT..........................................................................................................................................................................20110.001001171
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2119.00907011
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................2218.00806011
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2217.00707000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2417.00715010
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1916.00606000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2216.00606000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2615.00503020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................2115.00532000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2214.00404000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................2014.00404000
..........................................................................................................................GGGGTTAAACTGTACGTTGTATA.......................................................................................................................................................................2314.00400013
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..........................................................................................................................2514.00404000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2114.00404000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................2414.00404000
............................................................................................................................GGTTAAACTGTACGTTGTATG.......................................................................................................................................................................2113.00303000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1913.00302010
..........................................................................................................................GGGGTTAAACTGTACGTTGTATGG......................................................................................................................................................................2413.00320001
...........................................................................................................................GGGTTAAACTGTACGTTGTAT........................................................................................................................................................................2113.00301020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTC..........................................................................................................................2512.00202000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................2112.00210001
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2112.00202000
..........................................................................................................................GGGGTTAAACTGTACGTTG...........................................................................................................................................................................1912.00210001
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTG............................................................................................................................2212.00202000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2312.00202000
..........................................................................................................................GGGGTTAAACTGTACGTTGTATT.......................................................................................................................................................................2312.00210010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................2712.00202000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2512.00202000
..........................................................................................................................GGGGTTAAACTGTACGTTGTAA........................................................................................................................................................................2212.00200011
..........................................................................................................................GGGGTTAAACTGTACGTTGTATGAA.....................................................................................................................................................................2512.00200011
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2412.00202000
...............................................................................................................................TAAACTGTACGTTGTATG.......................................................................................................................................................................1812.00202000
.................................................................................................................................................TGCAAATCTTAAGAAATCC....................................................................................................................................................1912.00210010
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2412.00202000
..........................................................................................................................GGGGTTAAACTGTACGTTGTATC.......................................................................................................................................................................2312.00210001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................2411.00100010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTACC..........................................................................................................................2511.00100010
.................................................................................................................................AACTGTACGTTGTATGTGCA...................................................................................................................................................................2011.00100001
...........................................................................................................................GGGTTAAACTGTACGTTG...........................................................................................................................................................................1811.00101000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1811.00101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................2011.00101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCAA...............................................................................................................................2011.00100010
..........................................................................................................................................................................GTATAGCTTTTCCCCTTAA...........................................................................................................................1911.00101000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTC.............................................................................................................................2111.00101000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTA............................................................................................................................1811.00101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..........................................................................................................................2511.00101000
..........................................................................................................................GGGGTTAAACTGTACGTTGTATGTC.....................................................................................................................................................................2511.00100001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................2411.00101000
.....................................................................................................AATTCTACACAACA-T-TTAT..............................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................1811.00101000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCA..............................................................................................................................2011.00101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.............................................................................................................................2211.00101000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................2311.00101000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAACC.........................................................................................................................2611.00100010
..................................................................................................................................................GCAAATCTTAAGAAATCCA...................................................................................................................................................1911.00101000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTTT............................................................................................................................2011.00101000
..............................................................................................................................TTAAACTGTACGTTGTATG.......................................................................................................................................................................1911.00110000
......................................................................................................................................................................AAGCGTATAGCTTTTCCC................................................................................................................................1811.00101000
...........................................................................................................................GGGTTAAACTGTACGTTGTATGAA.....................................................................................................................................................................2411.00100010
droVir3
---------------------------------------------------------------------------------------------------------------------TTTAGGGGGTCAAACTGTACGTTGTATGTGCAAAT-G-ATGAAATTCATAAGCGTATAGCTTTTCCCCTTAAACGTTGATGTGACGACAAC--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22177972.0077972023254510391552998610198835666134252265503671110670412717411201364230515523452239940332712152840228901085561650451112414125700000100001000112207295614333020323272829648302026383662111320
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................21113847.001384711749367811330920208381737317072862039026259167362671844102436666573178711851813535513025014441425132476147674219231217444141659585132341809510019318617632030
..........................................................................................................................GGGGTCAAACTGTACGTTGTATG.......................................................................................................................................................................2318769.008769404423259201075223500021138261061742583546634528241824232462197216168120183129991801011781528910867351974284114605404552181452121697678349710927652725352115
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2316937.006937002370106192917241098114361918498103751215112448209130323225321194952769919621365816617370000000000010000000886201417735540100201100002
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................2112550.0025500024992000000000135111001113350165310020010000000000000000000003001000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................2311288.001288004412031100003532019367140135126338100532319927371267250648200000000000000000000730455821110000100001
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2511177.0011770016141010000321400000000112591614118102186040971608070000000000000000000000061855253000000003043
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2411084.001084001274402020061512330122015756328441330461055791561437000000000000000000002401905931100000000021
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................2311070.0010700029319419200000111825444677851481312166888120221023020170000000000000000000111104510000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201877.00877004003128120000311173563654438227857927698251538160000000000000000000430001600001201000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................221418.004180011410000100352611040020330122612271161717017221826300000000000000000000010072010101000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................231377.003770086220500000127122423149918928211416530130824141522000000000000000000012002000000000200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................241362.003620080501100000102312712250116514112213161021691875910000000000000000000005012131500000000100001
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................201352.00352003450000000000000000000200000101200000000000000000000000000000000000010000000000
...........................................................................................................................GGGTCAAACTGTACGTTGTATG.......................................................................................................................................................................221282.002821230200000000011000000010002042010000000000091158611712723801318300000031252819822412341
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................261280.00280004911000100210000000001029845140000504121051000000000000000000000000691840000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................221252.00252005812500000000003411120411012116521100010001000000000000000000003100601000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTA.........................................................................................................................................................................211229.002290161000000000010000000000020000000000000000226125033100203330000000335312314492600100
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201196.001960015110100000000011010001011422013100100000000000000000000000000002300000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................211181.00181026167001000000000000002000000100110000000000000000000000000000000000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................221176.00176001730000000000000000100000000100100000000000000000000000000000000000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................231147.00147009500000000000100000010010000000100000000000000000000000000000471000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTAT........................................................................................................................................................................221120.001201092201000000031242010300235310100011300000300102010000000241102531555676213021
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................191116.001160054110000001101111032022021315242002310000000000000000000000000001000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................271109.0010900270100000001000000000008120200000031441000000000000000000000100221201000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGT......................................................................................................................................................................241103.001030300001000000000000000010012000100000000000120001001000101100001000192057192300010
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18186.008600672020020000000010000002010130000020001000000000000000100000000000000000010000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................24176.007600131000000002002000101006457022120075601000000000000000000000022310000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................24168.00680080000000004120100110012685100210312910000000000000000000040003100000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................21159.005900131000000001110100000003040454720223200000000000000000000001000010100000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................24159.00590013110000000000000020100100131131001000100000000000000000000003061000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................22144.004400420000000000000000000000000000000010000000000000000000000000001000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTT............................................................................................................................................................................18140.004000700000000000000000000010020000000000000001001000000000001000000000108016200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..........................................................................................................................25139.003900101001000000001000000000000635301000003000000000000000000000040100000000000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................19137.003700330000000000000000000000000001000000000000000000000000000001001000100000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGA......................................................................................................................................................................24137.003700000000000000000000000000000000000000000000000000000000000000000200572103610001
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................19136.003600360000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................22136.00360050000000000000010010023001213220011110000000000000100000002000010005000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATC.......................................................................................................................................................................23136.00360001000000000000000000000000000000000000000321031032010000100000000023253300000
..........................................................................................................................GGGGTCAAACTGTACGTTGT..........................................................................................................................................................................20135.00350021002000000000000000000011000000000010000001001000000000102000100047134200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...........................................................................................................................24130.00300091000000000010100010010001810500000000000000000000000000000010000000000000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19129.002900241000000010000000000000000000100000000000000000000000020000000000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATT.......................................................................................................................................................................23128.002800010010000000100300013000000000000000000000001000000000100111000000011000200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTC..........................................................................................................................25127.00270001000000000013000100000001521600000004000000000000000000000010010000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT............................................................................................................................24127.0027001400000000000000000000000000000000000000000000000000000000000130000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................22127.002700200000000000001001100000000000000000100000000000000000000000020000000010000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATA.......................................................................................................................................................................23124.00240000000000000000000000000010000000000000000100001000010000100000010071133101010
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................21123.002300110000000000000000000001000000000000010000000000000000000000001900000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................25122.00220050010000000010000001002201301100000200000000000000000000001010000000000000000
...............................................................................................................................CAAACTGTACGTTGTATG.......................................................................................................................................................................18121.00210300000010000000000000000000000000000010000000000000000000000000000051001900000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...........................................................................................................................24121.00210071000000000001000000000011121200000000000000000000000000000022000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA.......................................................................................................................28119.00190030000000000000000000003142000000001000000000000000000000000004100000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................20118.00180040000000000000000000000020120210212100000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................20117.00170040000000000000000000002000322300000000000000000000000000000000100000000000000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................18116.001600110000000000000000000000000000000000000000000000000000220000000000010000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................24115.001500140000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..........................................................................................................................25115.00150030000000000000000000002020000120021000000000000000000000000001000010000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTAT............................................................................................................................23115.00150011000000000000000000010000320600000010000000000000000000000000000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTC............................................................................................................................22115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................21114.00140420000000000001000000000000100000000000000000000001000100000000000010101100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCC.................................................................................................................................18113.00130030000000000000100001003002010000010100000000000000000000000000000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTG...........................................................................................................................................................................19112.00120000000000000000000000000010000000000000000000000000000000000000000132130100000
.............................................................................................................................GTCAAACTGTACGTTGTATG.......................................................................................................................................................................20112.00121000000000000000000000000000000000000000000000000000000200000000000021005100000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................24112.00120010100000001000000000002010010000001100000000000000000000001000200000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCCC..........................................................................................................................25111.00110070000000000000000100010000100100000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAG..........................................................................................................................25110.00100010000000000000000200000010000010010200000000000000000000001000100000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.............................................................................................................................22110.00100030000000000000000010000030001000001000000000000000000000001000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................24110.00100051000000000000000000000011100000000000000000000000000000000000010000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTTC..........................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000090000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGT...........................................................................................................................2419.0090030000000000100000000000000010000001100000000000000000000000010010000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTCC..........................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTCCC..........................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000080000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2318.0080050000000000000000000001000000000000100000000000000000000000001000000000000000
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1817.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGTGC....................................................................................................................................................................2617.0070020000000003000000000000000000000000000000000000000000000010000000000000000100
.........................................................................................................................................................................CGTATAGCTTTTCCCCT..............................................................................................................................1717.0070000000000000000000000000000000000000000000000000000000160000000000000000000000
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2317.0070020000000000000000000000000000000000100000000000000000000000004000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..........................................................................................................................2517.0070000000000000000000000000000100000000200000000000000000000000001300000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTG............................................................................................................................2216.0060050000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTGT..........................................................................................................................2516.0060000000000001000000000000000000000010000000000000000000000000004000000000000000
.........................................................................................................................................................................CGTATAGCTTTTCCCCTTT............................................................................................................................1916.0060041000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2316.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTA............................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000060000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCAA..............................................................................................................................2116.0060030000000000000000000000010000000000000000000000000000000000000200000000000000
................................................................................................................................................................ATTCATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000060000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..........................................................................................................................2516.0060010000000001000000000000010000000010010000000000000000000010000000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
.................................................................................................................................................TGCAAAT-G-ATGAAATTCAA..................................................................................................................................................1915.0050000000000000000000000000010100000100100000000000000000000000000010000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCC...............................................................................................................................2115.0050040000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2115.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2515.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
..........................................................................................................................GGGGTCAAACTGTACGTTGTC.........................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000030002000000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000050000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................2415.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTATC..........................................................................................................................2514.0040000000000000000000000000000011000000000000000000000000000000010010000000000000
droMoj3
GATTCACAA---G--ATATTTT---AACAAA--------T------G-----------------------------------------------T-GA--ACAAAACACTCAAAT-GTTTAGGGGGTCAAACTGTACGTTGTATGTGTAA-ACA-ATGAAATCCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGGAATCAACA--GC---------A-ATTT-------A-----AGCA-TA--------------------------------G---------------------------CTACSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................22161502.00615022934764311515331132112
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................21115238.001523847966248491023746
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................2212976.00297615220228191
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2312173.0021739356286115210
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCC..............................................................................................................................2112071.002071200120680
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................2112056.0020561962200920
..........................................................................................................................GGGGTCAAACTGTACGTTGTATG.......................................................................................................................................................................2311483.001483165639202754686
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................201961.009613017356441
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................231524.0052423917232621
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................231483.004833195121524
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................201341.00341328000130
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................201281.00281260000210
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................241173.00173823100600
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTA.............................................................................................................................221162.00162108300501
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................251138.0013812440181
..........................................................................................................................GGGGTCAAACTGTACGTTGTAT........................................................................................................................................................................22179.007954000304
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................23175.007552215150
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19156.005612001421
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24153.005328202210
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................23150.00504700030
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................26149.00494210060
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22145.00454300020
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................19134.00343300010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAA........................................................................................................................27133.00333110001
..........................................................................................................................GGGGTCAAACTGTACGTTGTA.........................................................................................................................................................................21132.00328200220
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................18131.00312400070
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................19130.00302600040
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................19128.00282201050
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................21128.00281900090
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTC...........................................................................................................................24121.00211500060
..........................................................................................................................GGGGTCAAACTGTACGTTGT..........................................................................................................................................................................20120.00202402120
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................22120.00202000000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTC.............................................................................................................................21117.00176000110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTC............................................................................................................................22117.00171600010
..........................................................................................................................GGGGTCAAACTGTACGTTGTATT.......................................................................................................................................................................23115.00150121020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAT...........................................................................................................................24114.0014460031
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAA..........................................................................................................................24112.00121200000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................22112.0012701040
...........................................................................................................................GGGTCAAACTGTACGTTGTATG.......................................................................................................................................................................22110.0010810001
..........................................................................................................................GGGGTCAAACTGTACGTTGTATC.......................................................................................................................................................................23110.0010020080
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCA...............................................................................................................................20110.0010800020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................24110.0010900010
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2219.009500040
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTA.............................................................................................................................2119.009900000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAA.......................................................................................................................2819.009800010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2418.008800000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCG..............................................................................................................................2118.008000170
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCC..............................................................................................................................2017.007000070
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCT...............................................................................................................................2017.007300040
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2517.007601000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCAA.............................................................................................................................2216.006600000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGA......................................................................................................................................................................2416.006060000
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2316.006600000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCCC.............................................................................................................................2216.006200040
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2116.006600000
.................................................................................................................................................TGTAA-ACA-ATGAAATCCA...................................................................................................................................................1815.005020030
..........................................................................................................................GGGGTCAAACTGTACGTTGC..........................................................................................................................................................................2015.005000050
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTAAAA.........................................................................................................................2515.005500000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAG..........................................................................................................................2515.005500000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCTC..............................................................................................................................2115.005000050
........................................................................................................................................................................GCGTATAGCTTTTCCCCTTT............................................................................................................................2015.005400010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................2415.005110030
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTG............................................................................................................................2215.005500000
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTTT............................................................................................................................2414.004400000
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGC......................................................................................................................................................................2414.004000130
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC............................................................................................................................2314.004400000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCT...........................................................................................................................2414.004400000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTCC..........................................................................................................................2514.004400000
........................................................................................................................................................................GCGTATAGCTTTTCCCCT..............................................................................................................................1814.004200020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAAAAA......................................................................................................................2914.004400000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCT............................................................................................................................2314.004300010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTCC...........................................................................................................................2414.004300010
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................2414.004110020
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAC..........................................................................................................................2514.004000040
..........................................................................................................................GGGGTCAAACTGTACGTTG...........................................................................................................................................................................1914.004300010
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCC..............................................................................................................................1914.004000040
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2313.003300000
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAT..........................................................................................................................2513.003000030
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAAAC.........................................................................................................................2613.003100020
..........................................................................................................................GGGGTCAAACTGTACGTTGTATGCC.....................................................................................................................................................................2513.003100020
droGri2
G-----------------------------------------------------------------------------------------------GA--AAATAACACTCAAAT-GTTTAGGGGGTCAAACTGTACGTTATATGTGTAAAT-G-AAGAAATTCATAAGCGTATAGCTTTTCCCCTTAAAAGTTGAAGTGATAGCAACCTAAA---------A-AGT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2213566.003566353333
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCT..............................................................................................................................211737.007377316
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTT............................................................................................................................231327.003273234
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTT.............................................................................................................................211273.002732730
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCC...............................................................................................................................20178.0078780
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCT..............................................................................................................................20149.0049490
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTT............................................................................................................................22128.0028280
..........................................................................................................................GGGGTCAAACTGTACGTTATATG.......................................................................................................................................................................23128.0028226
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTT.............................................................................................................................20115.0015150
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................24115.0015150
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCC................................................................................................................................19110.0010100
......................................................................................................................................................................AAGCGTATAGCTTTTCCCC...............................................................................................................................1919.00990
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCTT.............................................................................................................................2319.00990
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTA............................................................................................................................2319.00990
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTG............................................................................................................................2317.00770
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTGG...........................................................................................................................2417.00770
....................................................................................................................................................................ATAAGCGTATAGCTTTTCCCCT..............................................................................................................................2214.00440
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTG...........................................................................................................................2413.00330
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCT..............................................................................................................................1913.00330
........................................................................................................................................................................GCGTATAGCTTTTCCCCTT.............................................................................................................................1913.00330
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTTT...........................................................................................................................2312.00220
...........................................................................................................................GGGTCAAACTGTACGTTATATG.......................................................................................................................................................................2212.00220
.........................................................................................................................................................................CGTATAGCTTTTCCCCTT.............................................................................................................................1812.00220
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTG.............................................................................................................................2212.00220
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAA...........................................................................................................................2411.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTG..........................................................................................................................2511.00110
..........................................................................................................................GGGGTCAAACTGTACGTTATA.........................................................................................................................................................................2111.00110
..........................................................................................................................GGGGTCAAACTGTACGTT............................................................................................................................................................................1811.00110
.......................................................................................................................................................................AGCGTATAGCTTTTCCCCTTT............................................................................................................................2111.00101
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAG...........................................................................................................................2411.00110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTG............................................................................................................................2211.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTGG............................................................................................................................2311.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTC.............................................................................................................................2211.00110
..........................................................................................................................................................................GTATAGCTTTTCCCCTTT............................................................................................................................1811.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTTTT..........................................................................................................................2511.00110
..........................................................................................................................GGGGTCAAACTGTACGTTATAT........................................................................................................................................................................2211.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTAC...........................................................................................................................2411.00110
............................................................................................................................GGTCAAACTGTACGTTATATG.......................................................................................................................................................................2111.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTTC............................................................................................................................2311.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCA..............................................................................................................................2111.00110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTGGC..........................................................................................................................2411.00110
.....................................................................................................................................................................TAAGCGTATAGCTTTTCCCCTCC............................................................................................................................2311.00110
......................................................................................................................................................................AAGCGTATAGCTTTTCCCCTTA............................................................................................................................2211.00110

Generated: 10/20/2015 at 07:36 PM