ID:

dse_312

 Coordinate:

scaffold_12:1472250-1472311 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

antisense_to_3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.4 -38.9 -38.9

Flybase annnotation

Antisense to utr3 [utr3_plus_6122]; Antisense to utr5 [utr5_plus_10994]; Antisense to pre_miRNA [Dsec\mir-iab-4-RM]; utr3 [utr3_minus_7917]; Antisense to miRNA [Dsec\miR-iab-4-3p-RB]; Antisense to miRNA [Dsec\miR-iab-4-5p-RA]

No Repeatable elements found

Sense Strand Reads

AGATGTATTAAAAAGTGTTTCACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCATTATCCAAAAGTGCTGAAAATTATGCCGTGT

***********************************((((((.((((((((..((((((((((((.((((.((....((......))..)))))).)))))))))))).)))))))).)))).)).************************************* 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body		 V114

embryo

 V115

head
..................................................TTACGTATACTGAAGGTAT............................................................................................. 19 0 1 185.00 185 51 94 13 27
..................................................TTACGTATACTGAAGGTATACC.......................................................................................... 22 0 1 130.00 130 79 16 34 1
..................................................TTACGTATACTGAAGGTATA............................................................................................ 20 0 1 70.00 70 34 21 10 5
..................................................TTACGTATACTGAAGGTATACCGG........................................................................................ 24 0 1 56.00 56 38 1 17 0
..................................................TTACGTATACTGAAGGTATAC........................................................................................... 21 0 1 47.00 47 31 10 3 3
..................................................TTACGTATACTGAAGGTATACCG......................................................................................... 23 0 1 27.00 27 12 2 13 0
..................................................TTACGTATACTGAAGGTATACCGGA....................................................................................... 25 0 1 17.00 17 6 2 9 0
..................................................TTACGTATACTGAAGGTA.............................................................................................. 18 0 1 15.00 15 0 0 13 2
..................................................TTACGTATACTGAAGGTATACCGT........................................................................................ 24 1 1 10.00 10 1 7 2 0
.......................................................................................AGGATACATTCAGTATACGTTTA.................................................... 23 0 1 9.00 9 3 3 3 0
..................................................TTACGTATACTGAAGGTATACCGGT....................................................................................... 25 1 1 9.00 9 2 2 3 2
...................................................TACGTATACTGAAGGTATAC........................................................................................... 20 0 1 8.00 8 8 0 0 0
.......................................................................................AGGATACATTCAGTATACGTTT..................................................... 22 0 1 7.00 7 3 1 2 1
...................................................TACGTATACTGAAGGTAT............................................................................................. 18 0 1 5.00 5 5 0 0 0
..................................................TTACGTATACTGAAGGTATAA........................................................................................... 21 1 1 5.00 5 1 4 0 0
................................................TGTTACGTATACTGAAGGTAT............................................................................................. 21 0 1 4.00 4 0 2 2 0
...................................................TACGTATACTGAAGGTATACC.......................................................................................... 21 0 1 4.00 4 4 0 0 0
...................................................TACGTATACTGAAGGTATACCGG........................................................................................ 23 0 1 4.00 4 4 0 0 0
........................................................................................GGATACATTCAGTATACGTTTA.................................................... 22 0 1 3.00 3 1 1 1 0
...............................TTGCTCGTGCTATCTCGTG................................................................................................................ 19 0 1 3.00 3 0 0 3 0
...................................................TACGTATACTGAAGGTATACCGGA....................................................................................... 24 0 1 3.00 3 2 0 1 0
........................................................ATACTGAAGGTATACCGG........................................................................................ 18 0 1 2.00 2 0 0 2 0
...................................................TACGTATACTGAAGGTATA............................................................................................ 19 0 1 2.00 2 2 0 0 0
..................................................TTACGTATACTGAAGGTATACA.......................................................................................... 22 1 1 2.00 2 1 0 0 1
..................................................TTACGTATACTGAAGGTATT............................................................................................ 20 1 1 2.00 2 0 2 0 0
..................................................TTACGTATACTGAAGGTATACCCC........................................................................................ 24 2 1 1.00 1 1 0 0 0
..................................................TTACCTATACTGAAGGTATACCGG........................................................................................ 24 1 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGAATGTAT............................................................................................. 19 1 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGCATA............................................................................................ 20 1 1 1.00 1 0 0 1 0
........................................................................................GGATACATTCAGTATACGTTT..................................................... 21 0 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGTATACTGG........................................................................................ 24 1 1 1.00 1 1 0 0 0
..................................................TGACGTATACTGAAGGTAT............................................................................................. 19 1 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGTATGCC.......................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTACGTACACTGAAGGTATA............................................................................................ 20 1 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGAAGGCATACC.......................................................................................... 22 1 1 1.00 1 1 0 0 0
.............................................................................................CATTCAGTATACGTTTAA................................................... 18 1 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGGAGGTATACCGGA....................................................................................... 25 1 1 1.00 1 0 0 1 0
...................................................TACGTATACTGAAGGTATACCG......................................................................................... 22 0 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGCATACCGG........................................................................................ 24 1 1 1.00 1 0 0 0 1
........................................CGCTCTCGTGTTACCTATACT..................................................................................................... 21 3 1 1.00 1 1 0 0 0
..............................GTTGCTCGTGCTATCTCGTG................................................................................................................ 20 0 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGAAGGTATTC........................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGGAT............................................................................................. 19 1 1 1.00 1 0 1 0 0
..................................................TTACGCATACTGAAGGTATAC........................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTACGTATCCTGAAGGTATA............................................................................................ 20 1 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGAAGGTATACT.......................................................................................... 22 1 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGAAGGTATATC.......................................................................................... 22 1 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGAAGGTATACCGTT....................................................................................... 25 2 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGAGGGTATACC.......................................................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................CGTATACTGAAGGTATACCGGA....................................................................................... 22 0 1 1.00 1 0 0 1 0
..................................................TTAGGTATACTGAAGGTAT............................................................................................. 19 1 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGAAGGTATACCGGATA..................................................................................... 27 0 1 1.00 1 0 0 1 0
..................................................TTACGTATACTGAAGGGATACC.......................................................................................... 22 1 1 1.00 1 1 0 0 0
.................................................CTTACGTATACTGAAGGTATAC........................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGTAA............................................................................................. 19 1 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGAAGGTATATCGG........................................................................................ 24 1 1 1.00 1 0 0 1 0
..................................................TTACGTATGCTGAAGGTATACCGG........................................................................................ 24 1 1 1.00 1 1 0 0 0
..................................................TTACCTATACTGAAGGTAT............................................................................................. 19 1 1 1.00 1 1 0 0 0
..................................................TTAGGTATACTGAAGGTATACC.......................................................................................... 22 1 1 1.00 1 0 0 1 0
..................................................TCACGTATACTGAAGGTAT............................................................................................. 19 1 1 1.00 1 1 0 0 0
..................................................TTACGTATCCTGAAGGTATACC.......................................................................................... 22 1 1 1.00 1 1 0 0 0
...............................................TTTTTACGTATACTGAAGGTATA............................................................................................ 23 2 1 1.00 1 1 0 0 0
..................................................TTACGTATACTGAAGGTATACCGTA....................................................................................... 25 1 1 1.00 1 0 0 1 0
..................................................TTGCGTATACTGAAGGTATACCGG........................................................................................ 24 1 1 1.00 1 1 0 0 0
..................................................TTAGGCATACTGAAGGTATA............................................................................................ 20 2 1 1.00 1 1 0 0 0
...................................................TACGTATACTGAAGGTATACCGGT....................................................................................... 24 1 1 1.00 1 0 1 0 0
..................................................TTACGTATACTGTAGGTAT............................................................................................. 19 1 1 1.00 1 0 1 0 0
..................................................TTACGTATATTGAAGGTATACCGG........................................................................................ 24 1 1 1.00 1 0 0 1 0
.................................................GTTACGGATGCTGAAGGT............................................................................................... 18 2 2 0.50 1 0 0 0 1
....................................................ACTTATACTGAAGGTAGACTG......................................................................................... 21 3 3 0.33 1 1 0 0 0
..................................................GTTCGTATACTGAAGGTAT............................................................................................. 19 2 7 0.14 1 0 1 0 0

Anti-sense strand reads

TCTACATAATTTTTCACAAAGTGTAGGGTGCAACGAGCACGATAGAGCACAATGCATATGACTTCCATATGGCCTATCCTATGTGAGTCCTATGTAAGTCATATGCAAATGCTCCAGCGTGTCTTAGCGGTAATAGGTTTTCACGACTTTTAATACGGCACA

*************************************((((((.((((((((..((((((((((((.((((.((....((......))..)))))).)))))))))))).)))))))).)))).)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V113

male body		 V115

head
.....................................................................................AGTCCTATGTAAGTCATATGCA....................................................... 22 0 1 859.00 859 378 477 3 1
......................................................................................GTCCTATGTAAGTCATATGCA....................................................... 21 0 1 247.00 247 223 23 1 0
.....................................................................................AGTCCTATGTAAGTCATATGC........................................................ 21 0 1 57.00 57 52 5 0 0
.......................................................................................TCCTATGTAAGTCATATGCA....................................................... 20 0 1 23.00 23 16 6 1 0
......................................................................................GTCCTATGTAAGTCATATGC........................................................ 20 0 1 22.00 22 22 0 0 0
.....................................................................................AGTCCTATGTAAGTTATATGCA....................................................... 22 1 1 11.00 11 0 11 0 0
....................................................................................TAGTCCTATGTAAGTCATATGCA....................................................... 23 1 1 9.00 9 3 6 0 0
....................................................................................TAGTCCTATGTAAGTCATATGC........................................................ 22 1 1 9.00 9 3 6 0 0
...................................................ATGCATATGACTTCCATATGGC......................................................................................... 22 0 1 8.00 8 7 1 0 0
.....................................................................................AGTCCTATGTAAGTCATTTGCA....................................................... 22 1 1 7.00 7 0 7 0 0
.....................................................................................AGTCCTATGTAAGTCATGTGCA....................................................... 22 1 1 7.00 7 0 7 0 0
.....................................................................................AGTCCTATGTAAGTCACATGCA....................................................... 22 1 1 7.00 7 3 4 0 0
.....................................................................................AGTCCTATGTAAGTCTTATGCA....................................................... 22 1 1 6.00 6 0 6 0 0
........................................................................................CCTATGTAAGTCATATGCA....................................................... 19 0 1 6.00 6 3 3 0 0
....................................................TGCATATGACTTCCATATGGC......................................................................................... 21 0 1 5.00 5 0 5 0 0
.....................................................GCATATGACTTCCATATGGC......................................................................................... 20 0 1 5.00 5 4 1 0 0
.....................................................................................TGTCCTATGTAAGTCATATGCA....................................................... 22 1 1 4.00 4 3 1 0 0
.....................................................................................AGTCCTATCTAAGTCATATGCA....................................................... 22 1 1 4.00 4 1 3 0 0
.....................................................................................ATTCCTATGTAAGTCATATGCA....................................................... 22 1 1 4.00 4 4 0 0 0
.................................................CAATGCATATGACTTCCATAT............................................................................................ 21 0 1 4.00 4 3 1 0 0
................................................ACAATGCATATGACTTCCATAT............................................................................................ 22 0 1 4.00 4 1 2 1 0
.....................................................................................AGTCATATGTAAGTCATATGCA....................................................... 22 1 1 3.00 3 3 0 0 0
......................................................................................TTCCTATGTAAGTCATATGCA....................................................... 21 1 1 3.00 3 3 0 0 0
.........................................................................................CTATGTAAGTCATATGCA....................................................... 18 0 1 3.00 3 0 3 0 0
................................................TCAATGCATATGACTTCCATAT............................................................................................ 22 1 1 3.00 3 3 0 0 0
.................................................CAATGCATATGACTTCCATATGGC......................................................................................... 24 0 1 2.00 2 1 1 0 0
.....................................................................................AGTCCTATGTACGTCATATGCA....................................................... 22 1 1 2.00 2 1 1 0 0
......................................................................................GTCCTATCTAAGTCATATGCA....................................................... 21 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATTCA....................................................... 22 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAATCATATGCA....................................................... 22 1 1 2.00 2 1 1 0 0
.....................................................................................AGTCCTATGTAAGTCATATG......................................................... 20 0 1 2.00 2 1 1 0 0
.....................................................................................AGTCCTATGTCAGTCATATGC........................................................ 21 1 1 2.00 2 2 0 0 0
.......................................................................................TCCTATGTAAGTCATATGC........................................................ 19 0 1 2.00 2 2 0 0 0
.......................................................................................TCCTATGTAAGTCATATGCAAA..................................................... 22 0 1 2.00 2 0 2 0 0
......................................................................................GTCCTATGTAAGTCACATGCA....................................................... 21 1 1 2.00 2 1 0 1 0
......................................................................................CTCCTATGTAAGTCATATGCA....................................................... 21 1 1 2.00 2 2 0 0 0
.....................................................................................AGTCCTATGTAAGTCCTATGCA....................................................... 22 1 1 2.00 2 1 1 0 0
.....................................................................................AGTCCTATGTAAGTCATATGTA....................................................... 22 1 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAGGTCATATGCA....................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATTTCAGTCCTATGCA....................................................... 22 3 1 1.00 1 0 1 0 0
.....................................................................................AGTGCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATCA........................................................ 21 2 1 1.00 1 0 1 0 0
.....................................................................................AGTCCCATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAATCATATGC........................................................ 21 1 1 1.00 1 1 0 0 0
....................................................................................CAGTCCTATGTAAGTCATATGCA....................................................... 23 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGGA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................TGTCCTATGTAACTCATATGCA....................................................... 22 2 1 1.00 1 1 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATGC........................................................ 23 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTGTGTATGTCATATGCA....................................................... 22 2 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAGTCATATG......................................................... 19 0 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAACTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCG....................................................... 22 1 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAGTCATACGCA....................................................... 21 1 1 1.00 1 1 0 0 0
......................................................................................GTCCTATGTAAGTCATATGGA....................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATTTAAGTCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAGTCATAAGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................GGTCCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
...................................................................................TCAGTCCTATGTAAGTCATATGCA....................................................... 24 1 1 1.00 1 1 0 0 0
...................................................................................GAAGTCCTATGTAAGTCATATGCA....................................................... 24 2 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAGTCATATT......................................................... 20 1 1 1.00 1 1 0 0 0
.....................................................................................AGTTCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
....................................................................................AAGTCCTATGTAAGTCATATGCA....................................................... 23 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTTATAT.......................................................... 19 1 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAATCATATGC........................................................ 20 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAACCATATGCA....................................................... 22 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATATGCT....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................TGTCCTATGTAAGCCATATGCA....................................................... 22 2 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAGTCATATGCAA...................................................... 22 0 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGCCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCTTATTTAAGTCATATGCA....................................................... 22 2 1 1.00 1 1 0 0 0
......................................................................................................ATGCAAATGCTCCAGCGTG......................................... 19 0 1 1.00 1 0 1 0 0
....................................................................................CAGTCCTATGTACGTCATATGCA....................................................... 23 2 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATCTGCA....................................................... 22 1 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAGTTATATGCA....................................................... 21 1 1 1.00 1 0 1 0 0
...................................................ATGCCTATGACTTCCATATGGC......................................................................................... 22 1 1 1.00 1 1 0 0 0
.........................................................................................CTATGTAAGTTATATGCA....................................................... 18 1 1 1.00 1 0 1 0 0
.......................................................................................TACTATGTAAGTCATATGCA....................................................... 20 1 1 1.00 1 0 0 1 0
...................................................................................TGAGTCCTATGTAAGTCATATGC........................................................ 23 0 1 1.00 1 0 1 0 0
.....................................................................................AGTCTTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
.......................................................................................TCCTATGTAAGTCATGTGCA....................................................... 20 1 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAAGTCATATGCAAC..................................................... 23 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTACGTAAGTTATATGCA....................................................... 22 2 1 1.00 1 0 1 0 0
....................................................................................AAGTCCTATGTAAATCATATGC........................................................ 22 2 1 1.00 1 0 1 0 0
....................................................................................AAGTCCTATGTAAGTCATATGC........................................................ 22 1 1 1.00 1 1 0 0 0
.....................................................................................CGTCCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................TGTCCTATGTAAGTCATATGCAAA..................................................... 24 1 1 1.00 1 0 1 0 0
.....................................................................................TGTCCTATGTTAGTCATATGCA....................................................... 22 2 1 1.00 1 1 0 0 0
....................GTGTAGGGTGCAACGAGCACGA........................................................................................................................ 22 0 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAGTCATATCCA....................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................TGTCCTATGCAAGTCATATGCAAA..................................................... 24 2 1 1.00 1 0 1 0 0
....................................................................................GAGTCCTATGTAAGTCATATGCA....................................................... 23 0 1 1.00 1 0 1 0 0
........................................................................................CCTATGTAAGTCATGTGCA....................................................... 19 1 1 1.00 1 0 1 0 0
..................................................AATGCATATGACTTCCATATGGC......................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATA........................................................... 18 0 1 1.00 1 0 1 0 0
...................................................................................TTAGTCCTATGTAAGTCATATGC........................................................ 23 1 1 1.00 1 0 1 0 0
.....................................................................................AGGCCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCATAGGTAAGTCATATGCA....................................................... 22 2 1 1.00 1 1 0 0 0
....................................................................................GAGTCCTATGTAAGTCATATGC........................................................ 22 0 1 1.00 1 0 1 0 0
.....................................................................................ACTCCTATGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTCTGTACGTCATATGCA....................................................... 22 2 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAGTCATTTGCAC...................................................... 23 2 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATGTAAGTCATAT.......................................................... 19 0 1 1.00 1 0 1 0 0
......................................................................................GTCCTATGTAATTCATATGCA....................................................... 21 1 1 1.00 1 1 0 0 0
......................................................................................GTGCTATGTAAGTCATATGCA....................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTTTGTAAGTCATATGCA....................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................................AGTCCTATGTAAGTCATGTGC........................................................ 21 1 1 1.00 1 0 1 0 0
.....................................................................................AGTCCTATTTAAATCATATGC........................................................ 21 2 1 1.00 1 1 0 0 0
...................................................ATGCATATGACTTCCATATGG.......................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................TAAGTCCTATGTAAGTCATATGCA....................................................... 24 1 1 1.00 1 0 1 0 0
................................................ACAATGCATATGACTTCCATA............................................................................................. 21 0 1 1.00 1 0 1 0 0
.....................................................................................GGTCCTATGTAAGTCATATGC........................................................ 21 1 1 1.00 1 1 0 0 0
............................................................................................................................GAACGGTGATAGGTTTTCA................... 19 3 20 0.05 1 0 1 0 0
..............................................................................................................................................ACGACTATTAATACGGTA.. 18 2 20 0.05 1 0 1 0 0
....................................................................ATAGTCTATCCTATCTGAG........................................................................... 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_12:1472200-1472361 + dse_312 confident AGATGTA-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATGCCGTGT
droSim2 3r:8574071-8574231 + dsi-mir-iab-8 Known_mirbase AAGTGTA-TTA-----------------------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATGCCGTGT
dm3 chr3R:12681948-12682109 - dme-mir-iab-8 Known_mirbase AGGTGTC-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------T-----CA---------AAAGTGCT-G------------AAAATT-------ATGCGTCGT
droEre2 scaffold_4770:8952372-8952533 + der_113 confident TAGAGTC-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT--AAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATACGTCGT
droYak3 3R:11708923-11709084 + dya_90 confident AGCAGTA-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT--AGT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ACGCGTCGT
droEug1 scf7180000409804:92878-93027 - AAGT------------------------------------------------A---------AACTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT--AAT--------------------------C-----CG---------AAAGTGAC-C------------AAAATG-------AA-----GT
droBia1 scf7180000299102:622744-622900 - AAAAAT----------------------------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CA---------AAAGTGCC-G------------AGAAAG-------ATGCGCCGC
droTak1 scf7180000411269:86542-86699 - AAAAG------------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CA---------AAAGTGCC-AA-----------AGAAGG-------ATGCGCCGC
droEle1 scf7180000486474:1729418-1729575 - AATTACA-TA------TATTTTTAAAGT------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CG---------AAAGTGAC-G------------A---------------------
droRho1 scf7180000759657:23956-24121 - AACAGTT-TTA------------ACAGT------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CG---------AAAGTGCC-A------------AACAGG-------ATGCGTCGC
droFic1 scf7180000452523:122325-122483 - AGGA------------------------------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAAT--------------------------C--CGGCG---------AAAGTGACTG------------AAA--G-------ACGTGTCGC
droKik1 scf7180000302313:151141-151315 - AATCACAATGT-CATATATTTTT---TT------------------------C---------AAGTGTTT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCAT--CAT--------------------------C-----CG---------CAAGTGCT-TATAAAGGACACGAAA-------------------
droAna3 scaffold_13340:7215155-7215301 + dan_56 confident AATA-TT-TCAG-----------AATAT------------------------T---------AAGT-TTT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT--CCT--------------------------C-----CG---------TAA--------------------------------------TGT
droBip1 scf7180000396708:1638833-1638998 - AAATATT-TCT------------AAAAC------------------------A---------AAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT--CCA--------------------------T-----CG---------TAATTTTCTG------------GTAAGA-------TAGTAGTGC
dp5 2:17671713-17671890 - dps-mir-iab-8 Known_mirbase GAATAAA-TCAC-----------AGTGCTCGGTT---------------------------TCA--GTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCT--A----------------------------------CATAACCGCTGAAAG------------------AAAATTACGAGTGC--AGTCG-
droPer2 scaffold_0:11526539-11526699 - dpe_160 candidate-rescued CAGTGCT----------------------CGGTTTACA--------------CGTTTAAATTCA--GTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCT--A----------------------------------CA---------TAACCGCT-G------------AAA-------------------
droWil2 scf2_1100000004943:4905561-4905694 + dwi_203 confident TAA-------------------------------------------------A---------AAGTGTTTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT--------------------------------------GG---------AAAGTGA-------------------------------------
droVir3 scaffold_12855:414660-414829 + dvi-mir-iab-8 Known_mirbase TAATGCAATCT------------A----------------------------A---------ATATATCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA----TAAGTGCTCCGCTATAAACACCTCAGTTTTCATCG---------CA------------------------------------------
droMoj3 scaffold_6540:1943711-1943876 - dmo_140 confident AGAAATT----------------------CGCTTTACGATTAAATGGTTATTG---------AAGT-TTTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----AT--------------------------T-----CG---------C---TCCT-G------------AAAA------------------
droGri2 scaffold_14906:12815082-12815225 - dgr_28 candidate-rescued ATATATA-TAC------------A----------------------------A---------AA--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTA----------------------------------------CA---------AGAGTGTC-C------------T------------TTGGAGTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AGATGTA-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATGCCGTGTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191185.0018551941327
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221130.001307916341
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................20170.00703421105
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24156.0056381170
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................21147.0047311033
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23127.0027122130
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25117.00176290
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................18115.001500132
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................24110.00101720
...........................................................................................................................................AGGATACATTCAGTATACGTTTA..................................................................................................................2319.0093330
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2519.0092232
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2018.0088000
...........................................................................................................................................AGGATACATTCAGTATACGTTT...................................................................................................................2217.0073121
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1815.0055000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2115.0051400
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2114.0040220
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2114.0044000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2314.0044000
............................................................................................................................................GGATACATTCAGTATACGTTTA..................................................................................................................2213.0031110
...................................................................................TTGCTCGTGCTATCTCGTG..............................................................................................................................................................................1913.0030030
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2413.0032010
............................................................................................................ATACTGAAGGTATACCGG......................................................................................................................................................1812.0020020
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1912.0022000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2212.0021001
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2012.0020200
......................................................................................................TTACGTATACTGAAGGTATACCCC......................................................................................................................................................2411.0011000
............................................................................................................................................GGATACATTCAGTATACGTTT...................................................................................................................2111.0011000
.................................................................................................................................................CATTCAGTATACGTTTAA.................................................................................................................1811.0010010
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.0011000
..................................................................................GTTGCTCGTGCTATCTCGTG..............................................................................................................................................................................2011.0010010
......................................................................................................TTACGTATACTGAAGGTATACT........................................................................................................................................................2211.0010010
......................................................................................................TTACGTATACTGAAGGTATACCGTT.....................................................................................................................................................2511.0010100
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................2211.0010010
......................................................................................................TTACGTATACTGAAGGTATACCGGATA...................................................................................................................................................2711.0010010
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1911.0010100
.......................................................................................................TACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2411.0010100
droSim2
AAGTGTA-TTA-----------------------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATGCCGTGTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................GGATACATTCAGTATACGTTTACG................................................................................................................241196.001960000194200000000000
...........................................................................................................................................AGGATACATTCAGTATACGTTTACG................................................................................................................251142.001420000142000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................241123.001230001026110223933018000
...........................................................................................................................................AGGATACATTCAGTATACGTTT...................................................................................................................221109.001090001107100000000000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................181106.00106000099601000000000
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191105.001051241361035112300000
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201104.00104022884200000501000
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................22174.00740752440004202701000
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................21148.0048040305010011600000
...........................................................................................................................................AGGATACATTCAGTATAC.......................................................................................................................18138.0038000038000000000000
...........................................................................................................................................AGGATACATTCAGTATACG......................................................................................................................19134.0034000033100000000000
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23134.00340021140000010016000
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25127.002702516000251401000
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................20120.0020000020000000000000
............................................................................................................................................GGATACATTCAGTATACGTTT...................................................................................................................21119.0019000018100000000000
............................................................................................................................................GGATACATTCAGTATACG......................................................................................................................18115.0015000015000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................25114.001401000020221006000
............................................................................................................................................GGATACATTCAGTATACGT.....................................................................................................................19111.0011000011000000000000
............................................................................................................................................GGATACATTCAGTATACGTT....................................................................................................................20111.0011000011000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTT....................................................................................................................2119.00900009000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2318.00800014000011001000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1818.00800016100000000000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2217.00700024000000001000
............................................................................................................................................GGATACATTCAGTATACGTTTA..................................................................................................................2217.00700005000000200000
...................................................................................TTGCTCGTGCTATCTCGTG..............................................................................................................................................................................1916.00600300000001200000
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2415.00501002001010000000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2414.00400010000002001000
............................................................................................................................................GGATACATTCAGTATACGTTTAC.................................................................................................................2314.00400004000000000000
.............................................................................................................................................GATACATTCAGTATACGTTTAA.................................................................................................................2213.00300010000020000000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2113.00300030000000000000
..............................................................................................................................ATAGGATACACTCAGGATACAT................................................................................................................................2212.00200000000000002000
......................................................................................................TTACGTATACTGAAGGTATACCGGG.....................................................................................................................................................2512.00200200000000000000
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1912.00200002000000000000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2012.00200002000000000000
..................................................................................GTTGCTCGTGCTATCTCGTG..............................................................................................................................................................................2012.00200200000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAT....................................................................................................................................................2612.00201001000000000000
.............................................................................................................................................GATACATTCAGTATACGT.....................................................................................................................1811.00100001000000000000
......................................................................................................TTACGTATACTGAAGGTAC...........................................................................................................................................................1911.00101000000000000000
......................................................................................................TTACGTATACTGAAGGT.............................................................................................................................................................1711.00100000010000000000
......................................................................................................TTACGTATACTGAAGGTATACCGTT.....................................................................................................................................................2511.00100000000000001000
......................................................................................................TTACGTATACTGAAGGTATACT........................................................................................................................................................2211.00100000000000100000
.......................................................................................................TACGTATACTGAAGGTATACCGGAT....................................................................................................................................................2511.00100001000000000000
......................................................................................................TTACGTATACTGAAGGTATACCA.......................................................................................................................................................2311.00100100000000000000
.................................................................................CGTTGCTCGTGCTATCTCGTG..............................................................................................................................................................................2111.00100000000100000000
......................................................................................................TTACGTATACTGAAGGTATACCGGC.....................................................................................................................................................2511.00100000000010000000
............................................................................................................ATACTGAAGGTATACCGG......................................................................................................................................................1811.00100000000001000000
...........................................................................................................................................AGGATACATTCAGTATACGTTTAC.................................................................................................................2411.00100001000000000000
...............................................................................................................................TAGGATACACTCAGGATACATTCAGT...........................................................................................................................2611.00100000000000100000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2111.00100000000001000000
...........................................................................................................................................AGGATACATTCAGTATACGTTTA..................................................................................................................2311.00100000000000100000
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1911.00100000000000001000
.............................................................................................................................................GATACATTCAGTATACGTTTA..................................................................................................................2111.00100001000000000000
.............................................................................................................................GATAGGATACACTCAGGATACATTCA.............................................................................................................................2611.00101000000000000000
........................................................................................................ACGTATACTGAAGGTATACCG.......................................................................................................................................................2111.00100000000000001000
..............................................................................................................................................ATACATTCAGTATACGTTTAT.................................................................................................................2111.00100000000100000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2011.00101000000000000000
.....................................................................................................GTTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2611.00100100000000000000
.................................................................................................................................................CATTCAGTATACGTTTACG................................................................................................................1911.00100001000000000000
dm3
AGGTGTC-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCAT--TAT--------------------------T-----CA---------AAAGTGCT-G------------AAAATT-------ATGCGTCGTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................1916832.006832000000000000000000000138000000000001201210401403114301000000000000000000000000000000000000000000011000101000000000001001000000000010000000000001002072288010400000000000020000330001010000002125146890009001395000000300000000010207910213101714140000000083020000112260005300000000000200000000086334859682037011016003233332100510265205030402900206245003295501197303022090051718382124233217221000010
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221923.00923000000000100000000000004000000000000000000103000003000000000000000000000000000000001000000000101200006000000101000401000000000010000100000010000000011400000000000000012010024549030250000071007000013090000000000000000055462049146001600000000027250300001543200240000000000000000000000515140400102200001172000140110520010000033000011002081322000000
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201564.0056400000000000000000000000000000000000000000000301000000000100000000000000000000000000000000100000030002010000000000000000000000000000000000000000000001800000000000000000010005020000000000040300001105000000000000000002225004302128000042001102000098500035000001000000000000000020002020161000000040005010040450001000053000030001603751377000000
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211486.004860000000000100000000000020000000000001110002030000020000000000000000000000000000000000000000000013001400000002000000000000000010010000000000001000000030000000000000002501002241301091000004142100002050000000000000000043130083610011000091007504000092320020000000000000000000000011404030082000100022001011110050000100010000013003022010000000
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................231194.0019400000000100010000000000200000000000000000000000000000000010000000000000000000000000030000060210215200621001023222107000000000000000000000000000000000020000000000000000102000100000000000002103000017028000000000000000000001000100000000000022000000132001000000000000000000000000001100190000000110000000001100000000900004000020100000000
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................241167.001670000000000000000000000000000000000000000000010000000000001100000000000000000000000050000001000001000000000000000000000000000000010100000000000000000000000000000000000100001310010220000033212000016012000000000000000003411004200006000000001300000080002000000000000000000000000100000070000001300000100000000000000600006000000000000000
............................................................................................................................................GGATACATTCAGTATACGTTTA..................................................................................................................221165.001650000000020000000000000000000000000000000000000000000000045000000000000000000000003402135100206003008102701000000007201100000000000000000000000000000000000000000000000000000000031100000000000000000020000000000000000000000000000000000000000000000020000000000000000000000000000000000020000001100000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................241155.001550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000001401000080800000000000001000111000000000000000000100000002000000000000000000000000000000000031100000052000110020110000000041000023000040110000000
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................21199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001100000000000000000000000000000000000401000020200000000000000000002000010000000000001000000040002000000000000000000000000100000015000000092000000030320000000017000020001020020000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATC...................................................................................................................................................27160.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................25156.00560000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000010000000000000000000000000000000000000000000001000000010000000000000000001000000000000000001900000030600000000000000000110000030000000000001200000071000000000000000000000000000000000030000000010000000000000000000100001000000000000000
...................................................................................TTGTTAGTGCTCTCTCGTG..............................................................................................................................................................................19150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000001700000094000000000000000000011800002000010000000000
...........................................................................................................................................AGGATACATTCAGTATACGTTT...................................................................................................................22149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000310000100000001100600000000000000000000000000000000001000000000000000010000000000000000000500000040000000000000000000001000000000000000000200000060001000000000000000000000000011000050000000010000000100000000000300001000000001000000
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25142.0042000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000701000020200000000000000000112000130000000000002200000051000000000000000000000000000000000030000001000000000001000000000300001000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTTTA..................................................................................................................23138.0038000000001000000000000000000000000000000000000000000000000000000000000000000000000305400000000000100050000000000000000000000000000000000000000100000000000000000000000000100001000000000000100000000100000000000000000011000000000000000000000000050000000000000000000000000000000000030000001000001000000000000000100001000000000000000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................21124.0024000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000303000020000000000000000000001000010000000000000000000001001000000000000000000000010000000040000000000000000100000000000100001001000000000000
.............................................................................................................................................GATACATTCAGTATACGTTTAA.................................................................................................................22124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000120000000100000000000000000000200000000000000000000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................18118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000010000000000000000000000000000000000080000000201000000000000000000000000001020000000000
......................................................................................................TTACGTATACTGAAGGTATACCATC.....................................................................................................................................................25117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GTTGTTAGTGCTCTCTCGTG..............................................................................................................................................................................20114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000300000000000000000000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................18113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010001000000000000000000000000100000040000000000010000000100000000100000001010000000000
......................................................................................................TTACGTATACTGAAGGTAG...........................................................................................................................................................19112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000020001000000020000100400000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACATC......................................................................................................................................................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAATC.......................................................................................................................................................23111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTTT...................................................................................................................21111.0011000000100000000000000000000000000000000000000000000000000000000000000000000000000200400000000000000000000000000100000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGT......................................................................................................................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000100001100000000200000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................22110.0010000000000000000000000000000000000000000000101000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000001000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000010000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTAC...........................................................................................................................................................1918.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000010000000000010000101100001000000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTT....................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000001000000000000000000000000200000000000000000000
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1917.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000010000101000000000100000001000000000000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000100000000000000100000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................TACATTCAGTATACGTTTACGT...............................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000001000000000000000000200000000000000000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2016.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000010000000000000000000000000000000001001000000000000
............................................................................................................................................GGATACATTCAGTATACGTTTAA.................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GATACATTCAGTATACGTTTA..................................................................................................................2116.006000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGTTACGTATACTGAAGGTATA..........................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................................................TTACGTATACTGAAGGT.............................................................................................................................................................1714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CGTTGTTAGTGCTCTCTCGTG..............................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000100001000000000000000
.............................................................................................................................................GATACATTCAGTATACGTTTAT.................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000
...............................................................................................................................TAGGATACACTCAGGATACATTCAGT...........................................................................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
............................................................................................................................................GGATACATTCAGTATACG......................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAT.........................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGTTACGTATACTGAAGGTA............................................................................................................................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................TTACGTATACTGAAGGTT............................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000001000000
...............................................................................................................................................TACATTCAGTATACGTTTA..................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAA....................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................ATACTGAAGGTATACCGG......................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GATACATTCAGTATACGTTTCA.................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................ACGTATACTGAAGGTATACCGG......................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATAGGATACACTCAGGATACAT................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATC..........................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ACGTTGTTAGTGCTCTCTCGTG..............................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................GATAGGATACACTCAGGATACATTCAGT...........................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................TACATTCAGTATACGTTTACGA...............................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CATTCAGTATACGTTTAA.................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATAA..................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGGAATC..................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATATT........................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................GTTACGTATACTGAAGGTATACCGG......................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATACATTCAGTATACGTTT...................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................AGTGCTCTCTCGTGTTACGTA.......................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGATC....................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GATAGGATACACTCAGGATACATTC..............................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TAGAGTC-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT--AAT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ATACGTCGTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191533.0053369044375810
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221264.0026415577198140
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211143.00143962623880
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201105.0010555701712140
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24199.009983501604
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23134.003428210300
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................24117.001761001000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................21113.001312100000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................20113.001312000100
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1819.0091000080
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2318.0088000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2517.0073000400
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2517.0073101200
...................................................................................TTGCTCGTGCTTTCTCGTG..............................................................................................................................................................................1916.0060100320
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2215.0055000000
...........................................................................................................................................AGGATACATTCAGTATACGTTT...................................................................................................................2215.0051011200
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1913.0033000000
................................................................................ACGTTGCTCGTGCTTTCTCGTG..............................................................................................................................................................................2212.0020000020
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2112.0020000200
...........................................................................................................................................AGGATACATTCAGTATACGTTTA..................................................................................................................2312.0021001000
......................................................................................................TTACGTATACTGAAGGTATACCCT......................................................................................................................................................2412.0021001000
............................................................................................................................................GGATACATTCAGTATACGTTTA..................................................................................................................2212.0021100000
......................................................................................................TTACGTATACTGAAGGTATACCGA......................................................................................................................................................2412.0022000000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1812.0022000000
.....................................................................................................GTTACGTATACTGAAGGTATACC........................................................................................................................................................2311.0011000000
...............................................................................................................................TAGGATACACTCAGGATACATTCA.............................................................................................................................2411.0010000010
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2411.0011000000
.....................................................................................................GTTACGTATACTGAAGGTATACCGT......................................................................................................................................................2511.0011000000
.........................................................................................................CGTATACTGAAGGTATAC.........................................................................................................................................................1811.0011000000
............................................................................................................................................GGATACATTCAGTATACGTT....................................................................................................................2011.0011000000
...........................................................................................................................................AGGATACATTCAGTATACGTTTAA.................................................................................................................2411.0011000000
.......................................................................................................TACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2411.0011000000
......................................................................................................TTACGTATACTGAAGGTATC..........................................................................................................................................................2011.0010000100
.....................................................................................................GTTACGTATACTGAAGGTATA..........................................................................................................................................................2111.0011000000
...................................................................................TTGCTCGTGCTTTCTCGTGT.............................................................................................................................................................................2011.0011000000
..................................................................................GTTGCTCGTGCTTTCTCGTG..............................................................................................................................................................................2011.0010000100
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1911.0010000100
............................................................................................................................................GGATACATTCAGTATACGTTT...................................................................................................................2111.0011000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAA....................................................................................................................................................2611.0011000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2011.0010000100
......................................................................................................TTACGTATACTGAAGGTATACCGC......................................................................................................................................................2411.0010100000
droYak3
AGCAGTA-TTA------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGCCTT--AGT--------------------------C-----CA---------AAAGTGCT-G------------AAAATT-------ACGCGTCGTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221529.00529010641731020000
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211270.00270014112160020000
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191131.001310680145530000
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................20191.009105021140060000
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24186.00860423950000000
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23123.0023016411010000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................21116.0016015100000000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2018.00808000000000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2417.00701100050000
...........................................................................................................................................AGGATACATTCAGTATACGTTTA..................................................................................................................2316.00600420000000
...........................................................................................................................................AGGATACATTCAGTATACGTTT...................................................................................................................2215.00502300000000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2315.00505000000000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1814.00404000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2514.00400220000000
....................................................................................................TGTTACGTATACTGAAGGTATA..........................................................................................................................................................2213.00300300000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2513.00300200010000
............................................................................................................................................GGATACATTCAGTATACGTTTA..................................................................................................................2213.00300300000000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2112.00202000000000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1812.00201100000000
......................................................................................................TTACGTATACTGAAGGTATACCGGC.....................................................................................................................................................2512.00200110000000
............................................................................................................................................GGATACATTCAGTATACGTTT...................................................................................................................2112.00200200000000
...........................................................................................................................................AGGATACATTCAGTATACGTT....................................................................................................................2112.00200200000000
............................................................................................................................................GGATACATTCAGTATACGTTC...................................................................................................................2112.00200200000000
...................................................................................TTGCTCGTGCTTTCTCGTG..............................................................................................................................................................................1911.00100100000000
........................................................................................................ACGTATACTGAAGGTATACC........................................................................................................................................................2011.00101000000000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.00101000000000
........................................................................................................ACGTATACTGAAGGTATACCGG......................................................................................................................................................2211.00101000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGG.....................................................................................................................................................2511.00101000000000
..........................................................................................................GTATACTGAAGGTATACCG.......................................................................................................................................................1911.00101000000000
........................................................................................................ACGTATACTGAAGGTATAC.........................................................................................................................................................1911.00101000000000
..............................................................................................................................................ATACATTCAGTATACGTTTACC................................................................................................................2211.00100100000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2011.00100000010000
........................................................................................................ACGTATACTGAAGGTATACCGGC.....................................................................................................................................................2311.00100100000000
...........................................................................................................................................AGGATACATTCAGTATACGTTC...................................................................................................................2211.00100100000000
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2411.00101000000000
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1911.00101000000000
.....................................................................................................GTTACGTATACTGAAGGTAT...........................................................................................................................................................2011.00100000010000
.....................................................................................................GTTACGTATACTGAAGGTATAC.........................................................................................................................................................2211.00100100000000
.................................................................................CGTTGCTCGTGCTTTCTCGTG..............................................................................................................................................................................2111.00100000010000
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1911.00101000000000
......................................................................................................TTACGTATACTGAAGGTATACCGA......................................................................................................................................................2411.00101000000000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2211.00100100000000
.........................................................................................................CGTATACTGAAGGTATACC........................................................................................................................................................1911.00101000000000
.............................................................................................................................................GATACATTCAGTATACGTTTAAC................................................................................................................2311.00100100000000
.............................................................................................................................................GATACATTCAGTATACGTTTAT.................................................................................................................2211.00101000000000
droEug1
AAGT------------------------------------------------A---------AACTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTAT--AAT--------------------------C-----CG---------AAAGTGAC-C------------AAAATG-------AA-----GTSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAAT----------------------------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CA---------AAAGTGCC-G------------AGAAAG-------ATGCGCCGCSizeHit CountTotal NormTotal
No Reads
droTak1
AAAAG------------------A----------------------------A---------AAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CA---------AAAGTGCC-AA-----------AGAAGG-------ATGCGCCGCSizeHit CountTotal NormTotal
No Reads
droEle1
AATTACA-TA------TATTTTTAAAGT------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CG---------AAAGTGAC-G------------A---------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AACAGTT-TTA------------ACAGT------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCACCAT--AAT--------------------------C-----CG---------AAAGTGCC-A------------AACAGG-------ATGCGTCGCSizeHit CountTotal NormTotal
No Reads
droFic1
AGGA------------------------------------------------A---------AAGTGTTT--CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCACTATGAAAT--------------------------C--CGGCG---------AAAGTGACTG------------AAA--G-------ACGTGTCGCSizeHit CountTotal NormTotal
No Reads
droKik1
AATCACAATGT-CATATATTTTT---TT------------------------C---------AAGTGTTT--CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCATCAT--CAT--------------------------C-----CG---------CAAGTGCT-TATAAAGGACACGAAA-------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AATA-TT-TCAG-----------AATAT------------------------T---------AAGT-TTT--CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT--CCT--------------------------C-----CG---------TAA--------------------------------------TGTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191232.0023244001015325
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................22189.008929442536
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24147.00473330308
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................20145.00452540088
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................21129.00292070020
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................24119.00193000124
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................21118.00183001113
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................25111.0011300134
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23110.0010600031
...............................................................................................................................................TACATTCAGTATACGTATACGT...............................................................................................................2216.006000060
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1814.004400000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2114.004310000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2014.004110020
............................................................................................................................................GGATACATTCAGTATACGTATA..................................................................................................................2214.004130000
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................2013.003000030
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2512.002200000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2212.002200000
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1912.002200000
......................................................................................................TTACGTATACTGAAGGTATACCA.......................................................................................................................................................2311.001100000
...........................................................................................................................................AGGATACATTCAGTATACGTAT...................................................................................................................2211.001100000
............................................................................................................................................GGATACATTCAGTATACGTAT...................................................................................................................2111.001010000
......................................................................................................TTACGTATACTGAAGGTATACCGTTG....................................................................................................................................................2611.001000010
........................................................................................................ACGTATACTGAAGGTATACC........................................................................................................................................................2011.001100000
......................................................................................................TTACGTATACTGAAGGTATACCGGTGT...................................................................................................................................................2711.001000010
.......................................................................................................TACGTATACTGAAGGTATACCGTT.....................................................................................................................................................2411.001100000
....................................................................................................TGTTACGTATACTGAAGGTAG...........................................................................................................................................................2111.001000010
....................................................................................................TGTTACGTATACTGAAGGTATT..........................................................................................................................................................2211.001100000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2111.001100000
.....................................................................................................................................ACACTCAGGATACATTCAG............................................................................................................................1911.001010000
......................................................................................................TTACGTATACTGAAGGTATACCGC......................................................................................................................................................2411.001000010
.........................................................................................................CGTATACTGAAGGTATACCGG......................................................................................................................................................2111.001100000
....................................................................................................TGTTACGTATACTGAAGGTATACC........................................................................................................................................................2411.001010000
......................................................................................................TTACGTATACTGAAGGTAC...........................................................................................................................................................1911.001000010
......................................................................................................TTACGTATACTGAAGGTACT..........................................................................................................................................................2011.001100000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2011.001100000
....................................................................................................TGTTACGTATACTGAAGGTATG..........................................................................................................................................................2211.001100000
....................................................................................................TGTTACGTATACTGAAGGT.............................................................................................................................................................1960.171100000
droBip1
AAATATT-TCT------------AAAAC------------------------A---------AAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCACCAT--CCA--------------------------T-----CG---------TAATTTTCTG------------GTAAGA-------TAGTAGTGCSizeHit CountTotal NormTotal
No Reads
dp5
GAATAAA-TCAC-----------AGTGCTCGGTT---------------------------TCA--GTTCGACGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCT--A----------------------------------CATAACCGCTGAAAG------------------AAAATTACGAGTGC--AGTCG-SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211736.007360611562815690110
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191390.0039012410153799060
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201370.00370029961037311040
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221326.003260105157351552070
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................241183.001830484031001243
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................20132.003203110000000
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................19130.003003000000000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................18128.002802800000000
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23120.002001210100060
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25115.00150700112040
...........................................................................................................................................AGGATACATTCAGTATACGTATA..................................................................................................................23111.00110080200010
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................21111.001101100000000
............................................................................................................................................GGATACATTCAGTATACGTATA..................................................................................................................2216.0060060000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2516.0060200002020
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................2215.0050200300000
...........................................................................................................................................AGGATACATTCAGTATACGTA....................................................................................................................2114.0040130000000
...........................................................................................................................................AGGATACATTCAGTATACGTAT...................................................................................................................2214.0040310000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2014.0040000004000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2214.0040210000010
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2314.0040400000000
........................................................................................................ACGTATACTGAAGGTATAC.........................................................................................................................................................1913.0030300000000
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................2013.0030000002010
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2412.0020000001010
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2112.0020200000000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1812.0020100100000
...............................................................................................................................................TACATTCAGTATACGTATACGT...............................................................................................................2211.0010000001000
.............................................................................................................................................GATACATTCAGTATACGTATAC.................................................................................................................2211.0010010000000
........................................................................................................ACGTATACTGAAGGTATACCGG......................................................................................................................................................2211.0010100000000
...............................................................................................................................................TACATTCAGTATACGTATA..................................................................................................................1911.0010100000000
......................................................................................................TTACGTATACTGAAGGTTA...........................................................................................................................................................1911.0010000001000
...............................................................A--GTTCGACGTATCCCGCGTTGCT............................................................................................................................................................................................2311.0010000100000
......................................................................................................TTACGTATACTGAAGGTATTA.........................................................................................................................................................2111.0010000100000
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2111.0010000001000
......................................................................................................TTACGTATACTGAAGGTATACT........................................................................................................................................................2211.0010000000010
......................................................................................................TTACGTATACTGAAGGTATTT.........................................................................................................................................................2111.0010000000010
...........................................................................................................................................AGGATACATTCAGTATACGTATAC.................................................................................................................2411.0010100000000
........................................................................................................ACGTATACTGAAGGTATACCG.......................................................................................................................................................2111.0010100000000
.........................................................................................................CGTATACTGAAGGTATACCGG......................................................................................................................................................2111.0010100000000
.......................................................................................................TACGTATACTGAAGGTATACA........................................................................................................................................................2111.0010100000000
droPer2
CAGTGCT----------------------CGGTTTACA--------------CGTTTAAATTCA--GTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCATCCT--A----------------------------------CA---------TAACCGCT-G------------AAA-------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191543.00543025562505
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................20164.0064015191128
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................21146.00460393004
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................22124.00242192001
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24111.0011081002
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................20110.0010010009
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2312.002020000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2412.002000002
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2112.002020000
......................................................................................................TTACGTATACTGAAGGTTA...........................................................................................................................................................1912.002000002
......................................................................................................TTACGTATACTGAAGGTATACT........................................................................................................................................................2211.001000001
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.001010000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2011.001010000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2111.001000001
.........................................................................................................CGTATACTGAAGGTATACCGG......................................................................................................................................................2111.001010000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2511.001000001
............................................................................................................................................GGATACATTCAGTATACGTATA..................................................................................................................2211.001010000
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................2011.001000001
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1911.001010000
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2411.001010000
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1911.001000001
...........................................................................ATCCCGCGTTGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2711.001100000
......................................................................................................TTACGTATACTGAAGGTATAT.........................................................................................................................................................2111.001001000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1811.001010000
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................2311.001010000
droWil2
TAA-------------------------------------------------A---------AAGTGTTTCACACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCATCT--------------------------------------GG---------AAAGTGA-------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191236.002361128672317
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211224.0022411771432
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201135.001350776448
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................24187.00870580290
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................22166.00660411222
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23124.0024017070
...........................................................................................................................................AGGATACATTCAGTATACGTA....................................................................................................................21116.0016040102
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25114.001404190
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................22113.0013110110
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................18113.0013013000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................20111.0011011000
...................................................................................TTGTTGGTGTTTCATCGTG..............................................................................................................................................................................19110.0010000100
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................2019.00904320
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1919.00909000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2319.00909000
...........................................................................................................................................AGGATACATTCAGTATACGTAT...................................................................................................................2216.00604020
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2514.00401030
...........................................................................................................................................AGGATACATTCAGTATACGTATA..................................................................................................................2313.00301020
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2112.00202000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2212.00202000
............................................................................................................................................GGATACATTCAGTATACGTAT...................................................................................................................2112.00202000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2412.00201010
.....................................................................................................GTTACGTATACTGAAGGTATAC.........................................................................................................................................................2212.00202000
.................................................................................CGTTGTTGGTGTTTCATCGTG..............................................................................................................................................................................2112.00200020
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2012.00202000
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2111.00100100
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1811.00100010
.......................................................................................................TACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2411.00101000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2111.00101000
...........................................................................ATCCCGCGTTGTTGGTGTTTCATCGTG..............................................................................................................................................................................2711.00100010
........................................................................................................ACGTATACTGAAGGTATAC.........................................................................................................................................................1911.00101000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.00101000
......................................................................................................TTACGTATACTGAAGGTATACG........................................................................................................................................................2211.00101000
......................................................................................................TTACGTATACTGAAGGTATACCGGTA....................................................................................................................................................2611.00101000
..............................................................................................................................................ATACATTCAGTATACGTATACG................................................................................................................2211.00100010
........................................................................................................ACGTATACTGAAGGTATA..........................................................................................................................................................1811.00101000
.......................................................................................................TACGTATACTGAAGGTATACA........................................................................................................................................................2111.00101000
...........................................................................................................................................AGGATACATTCAGTATACGTC....................................................................................................................2111.00101000
...........................................................................................................................................AGGATACATTCAGTATACGTATAA.................................................................................................................2411.00101000
.......................................................................................................................................ACTCAGGATACATTCAGT...........................................................................................................................1811.00100100
.......................................................................................................TACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2411.00101000
.............................................................................CCCGCGTTGTTGGTGTTTCATCGTG..............................................................................................................................................................................2511.00100100
droVir3
TAATGCAATCT------------A----------------------------A---------ATATATCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA----TAAGTGCTCCGCTATAAACACCTCAGTTTTCATCG---------CA------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................1911125.0011251111000121125139100001011106926422125211931900148000011200000000000000000000117800000001000100000
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221694.0069410205540605040000413010328010211206237117040000049000000000000000000010102000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................241635.006350023201400000000000000008000001708658242050100024000000000000000000000002000000000000000
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211530.0053000201502010100003102103160002380722485020000032000000000000000000000201000000000000000
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201344.00344006710723801500001101005110000054501862020000011000000000000000000010400000000000000110
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................231306.0030610132090101000001101020150000069401583070000143000000000000000000000100000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................251149.00149000015000000000000001100000031171358070000015000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................211121.00121002009010400000000003000001013316270100010012000000000000000000000100000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................20190.009000000110000000000000061000000152151707000006000000000000000000000100000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTA....................................................................................................................21181.00810001010000000000000000100000162582402000003000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................25168.00680020030000000000001000010000181751301000006000000000000000000000100000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................24140.004000100800000000000000000000004315020000014000000000000000000000200000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTAT...................................................................................................................22125.00250000000000000000000000000000782601000000000000000000000100000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTATA..................................................................................................................23123.00230010000000000000000000000000960601000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTATA..................................................................................................................22121.00210052000000000000000000000000241401000000000000000000000000010000100000000000000
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................22116.00160010000100000000000000100000631300000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................20116.001600150000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................21115.001500141000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACT..........................................................................................................................................36114.00140000000000000000000000000000000000000000010000000003020002600000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTC.........................................................................................................................................37113.00130000000000000000000000000000000000000000000000000000220010800000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCC.......................................................................................................................................................2318.0080000000000000000000000000000303200000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAAA........................................................................................................................................................2218.0080000000000000000000000000000221200001000000000000000000000000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTAA...................................................................................................................2218.0080000000000000000000000000000022300000000000000000000000000000100000000000000000
........................................................................................................ACGTATACTGAAGGTATACCGG......................................................................................................................................................2217.0070030000000000000000000000000111100000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1817.0070000000101000000000020000000010101000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2217.0070020000000000000000000000000100400000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAT.........................................................................................................................................................2116.0060010000000000010000000000000210100000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTAT...................................................................................................................2115.0050020000000000000000000000000021000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGTA....................................................................................................................................................2615.0050000000000000000000000002000020100000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAA....................................................................................................................................................2615.0050000000000000000000000000000111200000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTAA...........................................................................................................................................................1914.0040000010000000000000000000000100100000000000000000000000000000100000000000000000
...........................................................................................................................................AGGATACATTCAGTATACG......................................................................................................................1914.0040000000000000000000000000000100200000000000000000000000000001000000000000000000
......................................................................................................TTACGTATACTGAAGGTAC...........................................................................................................................................................1913.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2113.0030000020000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................ACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2313.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATC..........................................................................................................................................................2013.0030000000100000000000000000000010000000000000000000000000000000100000000000000000
....................................................................................CGCTGGTGTTTCCTCGTG..............................................................................................................................................................................1813.0030000000000000000000000000000020100000000000000000000000000000000000000000000000
............................................................................................................ATACTGAAGGTATACCGG......................................................................................................................................................1813.0030000010000000000000000000000010000000001000000000000000000000000000000000000000
.........................................................................................................CGTATACTGAAGGTATACCGG......................................................................................................................................................2112.0020010000000000000000000000000000001000000000000000000000000000000000000000000000
...........................................................................ATCCCGCGTCGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2712.0020000010000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATAAAA.......................................................................................................................................................2312.0020000000000000000000000000000110000000000000000000000000000000000000000000000000
..........................................................................................................................................CAGGATACATTCAGTATACGTA....................................................................................................................2212.0020000000000000000000000000000101000000000000000000000000000000000000000000000000
.........................................................................................................................................TCAGGATACATTCAGTATACGTATA..................................................................................................................2512.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
..................................................................................GTCGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2012.0020010000000000000000000000000000000000000000000000000000000010000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACT........................................................................................................................................................2212.0020000000000000000010000000000000000000001000000000000000000000000000000000000000
.............................................................................CCCGCGTCGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2512.0020000000000000000000000000000000001000000000000000010000000000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTT....................................................................................................................2112.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
.....................................................................................................GTTACGTATACTGAAGGTAT...........................................................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1912.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..........T------------A----------------------------A---------ATATATCA--CACATCCCGC..................................................................................................................................................................................................2112.0020000000000000000000000000000020000000000000000000000000000000000000000000000000
.............................................................................................................................................GATACATTCAGTATACGTAT...................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GATACATTCAGTATACGTATAA.................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTG....................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................CAGGATACATTCAGTATACGTAT...................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGCA....................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................ACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCAA......................................................................................................................................................2411.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTCT........................................................................................................................................3811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTA....................................................................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................CGTCGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGG.....................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGATAGGATACA............................................................................................................................................3411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................TCAGGATACATTCAGTATACGT.....................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTT............................................................................................................................................................1811.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................GTTACGTATACTGAAGGTATA..........................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAT....................................................................................................................................................2611.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGTC....................................................................................................................................................2611.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GTCGCTGGTGTTTCCTCGTA..............................................................................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATT..........................................................................................................................................................2011.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCT.......................................................................................................................................................2311.0010000000000000000000000001000000000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGGAG....................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................ACGTATACTGAAGGTATACCGT......................................................................................................................................................2211.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTATAA.................................................................................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................A----TAAGTGCTCCGCTATAAACA....................................................................2111.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................AGGATACATTCAGTATACGTC....................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................TACGTATACTGAAGGTATACCGGT.....................................................................................................................................................2411.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATACCGTC.....................................................................................................................................................2511.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGTAA...................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................GGATACATTCAGTATACGT.....................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GATACATTCAGTATACGTATAT.................................................................................................................2211.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................TTACGTATACTGAAGGTATATA........................................................................................................................................................2211.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
AGAAATT----------------------CGCTTTACGATTAAATGGTTATTG---------AAGT-TTTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACA----AT--------------------------T-----CG---------C---TCCT-G------------AAAA------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................221891.0089121511016559
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................191603.006031600682427
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................211595.005954654001179
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................201147.001471073001522
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................241104.0010466601274
............................................................................................................................................GGATACATTCAGTATACGTATA..................................................................................................................22192.00924000880
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................20154.00544900050
......................................................................................................TTACGTATACTGAAGGTATACCG.......................................................................................................................................................23133.00332510133
...........................................................................................................................................AGGATACATTCAGTATACGTATA..................................................................................................................23123.00231000220
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................24116.00161000510
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................21116.00161500010
...........................................................................................................................................AGGATACATTCAGTATACGTA....................................................................................................................21111.0011020090
......................................................................................................TTACGTATACTGAAGGTATACCGGT.....................................................................................................................................................25110.0010200017
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1918.008800000
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1818.008800000
......................................................................................................TTACGTATACTGAAGGTATACCGGA.....................................................................................................................................................2517.007310012
.......................................................................................................TACGTATACTGAAGGTATACCGG......................................................................................................................................................2315.005500000
...................................................TG---------AAGT-TTTCACACATCCCGC..................................................................................................................................................................................................2114.004010030
......................................................................................................TTACGTATACTGAAGGTATAA.........................................................................................................................................................2114.004100102
.........................................................................................................CGTATACTGAAGGTATACCGGA.....................................................................................................................................................2214.004010030
.............................................................................................................................................GATACATTCAGTATACGTATAC.................................................................................................................2214.004000040
......................................................................................................TTACGTATACTGAAGGTATACA........................................................................................................................................................2213.003100020
...........................................................................................................................................AGGATACATTCAGTATACGT.....................................................................................................................2013.003100002
............................................................................................................................................GGATACATTCAGTATACGTAT...................................................................................................................2112.002200000
.............................................................................................................................................GATACATTCAGTATACGTATA..................................................................................................................2112.002100010
...........................................................................................................................................AGGATACATTCAGTATACGTAT...................................................................................................................2212.002200000
............................................................................................................................................GGATACATTCAGTATACGTAC...................................................................................................................2112.002000020
......................................................................................................TTACGTATACTGAAGGTAC...........................................................................................................................................................1911.001000001
........................................................................................................ACGTATACTGAAGGTATA..........................................................................................................................................................1811.001100000
......................................................................................................TTACGTATACTGAAGGTATACG........................................................................................................................................................2211.001000010
..........................................................................................................GTATACTGAAGGTATACC........................................................................................................................................................1811.001000010
......................................................................................................TTACGTATACTGAAGGTATAT.........................................................................................................................................................2111.001100000
............................................................................................................................................GGATACATTCAGTATACGTATT..................................................................................................................2211.001000010
......................................................................................................TTACGTATACTGAAGGTATACCGGTA....................................................................................................................................................2611.001100000
.............................................................................................................................GATAGGATACACTCAGGATACATTCAGT...........................................................................................................................2811.001000001
........................................................................................................ACGTATACTGAAGGTATACCGG......................................................................................................................................................2211.001100000
.....................................................................................................GTTACGTATACTGAAGGTATAC.........................................................................................................................................................2211.001100000
..............................................................................................................................ATAGGATACACTCAGGAT....................................................................................................................................1811.001001000
......................................................................................................TTACGTATACTGAAGGTTC...........................................................................................................................................................1911.001000001
............................................................................................................................................GGATACATTCAGTATACGT.....................................................................................................................1911.001100000
.............................................................................................................................................GATACATTCAGTATACGTATAA.................................................................................................................2211.001000010
........................................................................................................................................CTCAGGATACATTCAGTA..........................................................................................................................1811.001000001
............................................................................................................ATACTGAAGGTATACCGGT.....................................................................................................................................................1911.001000001
.............................................................................CCCGCGTTGCTGGTGTTTCCTCGTG..............................................................................................................................................................................2511.001000010
........................................................................................................................................CTCAGGATACATTCAGTATACGTATA..................................................................................................................2611.001000001
.............................................................................................................................................GATACATTCAGTATACGTAT...................................................................................................................2011.001100000
.......................................................................................................................ATACCGGATAGGATACACTCAGGAT....................................................................................................................................2511.001000001
....................................................................................................TGTTACGTATACTGAAGGTAT...........................................................................................................................................................2111.001000001
......................................................................................................TTACGTATACTGAAGGTATACCT.......................................................................................................................................................2311.001000010
.............................................................................................................................GATAGGATACACTCAGGATAC..................................................................................................................................2111.001100000
......................................................................................................TTACGTATACTGAAGGTA............................................................................................................................................................1811.001100000
.......................................................................................................TACGTATACTGAAGGTATACCG.......................................................................................................................................................2211.001100000
..................................................................................................CGTGTTACGTATACTGAAGGTATAC.........................................................................................................................................................2511.001100000
droGri2
ATATATA-TAC------------A----------------------------A---------AA--------CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTA----------------------------------------CA---------AGAGTGTC-C------------T------------TTGGAGTGTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................TTACGTATACTGAAGGTAT...........................................................................................................................................................19132.00321319
......................................................................................................TTACGTATACTGAAGGTATA..........................................................................................................................................................20118.0018171
......................................................................................................TTACGTATACTGAAGGTATAC.........................................................................................................................................................21115.0015150
......................................................................................................TTACGTATACTGAAGGTATACC........................................................................................................................................................2219.00990
......................................................................................................TTACGTATACTGAAGGTATACCGG......................................................................................................................................................2414.00440
.......................................................................................................TACGTATACTGAAGGTATACC........................................................................................................................................................2114.00440
.......................................................................................................TACGTATACTGAAGGTAT...........................................................................................................................................................1813.00330
.......................................................................................................TACGTATACTGAAGGTATA..........................................................................................................................................................1912.00220
......................................................................................................TTACGTATACTGAAGGTATACCGT......................................................................................................................................................2412.00211
.......................................................................................................TACGTATACTGAAGGTATAC.........................................................................................................................................................2012.00220

Generated: 10/20/2015 at 07:35 PM