ID:

dse_307

 Coordinate:

scaffold_26:130804-130874 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.5 -13.4 -13.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DMCR1ALINECR1-

Sense Strand Reads

GAGCAATCCGATTAATCCGCTGTGGTGAAATCCACTGTGATTGCTAAAGATTCCGATTTGTCTGCACTGGTCTCTGTGATTCTACCTGTCCCGATTAGTTTACCACCACAAGTTGGCACTTCCGAAATACAATCTGTAGGGCCAAAACCCCTTACGGGGGTTCCACTAAAG
************************************..(((((.....((..(((((((((.((.(((((((.....(((.......)))..)))))))....))..)))))))))....)).......))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
...............................................................................................TAGTTTACCACCACAAGTTGGCACT................................................... 25 0 1 13.00 13 10 2 1
..............................................................................................TTAGTTTACCACCACAAGTTGGCACT................................................... 26 0 1 7.00 7 6 1 0
.......................................................................................................................TTCCGAAATACAATCTGTAGGGCC............................ 24 0 1 4.00 4 4 0 0
.......................................................................................................................TTCCGAAATACAATCTGTAGGGCCAA.......................... 26 0 1 3.00 3 3 0 0
........................................................................................................................TCCGAAATACAATCTGTAGGGCCAA.......................... 25 0 1 3.00 3 3 0 0
................................................................................................AGTTTACCACCACAAGTTGGCACT................................................... 24 0 1 3.00 3 3 0 0
...............................................................................................TAGTTTACCACCACAAGTTGGCAC.................................................... 24 0 1 2.00 2 2 0 0
.......................................................................................................................TTCCGAAATACAATCTGTAGGGCCA........................... 25 0 1 2.00 2 2 0 0
...............................................................................................TAGTTTACCACCACAAGTTGGCA..................................................... 23 0 1 2.00 2 1 1 0
..............................................................................................TTAGTTTACCACCACAAGTTGGCAC.................................................... 25 0 1 2.00 2 2 0 0
........................................................................TCTGTGATTCTACCTGTCCCG.............................................................................. 21 0 1 1.00 1 1 0 0
........................................................................................................................TCCGAAATACAATCTGTAGGGCCAAAAC....................... 28 0 1 1.00 1 1 0 0
..............................................................................................TTAACTTACCACCACAAGTTGGCACT................................................... 26 2 1 1.00 1 1 0 0
..........................................................................................................................CGAAATACAATCTGTAGGGCCAAAAC....................... 26 0 1 1.00 1 1 0 0
...............................................................................................TAGTTTACCACCACAAGTTGG....................................................... 21 0 1 1.00 1 0 1 0
............TAATCCGCTGTGGTGAAATCCACTG...................................................................................................................................... 25 0 1 1.00 1 1 0 0
...............................................................................................................................TACAATCTGTAGGGCCAAAACCCCT................... 25 0 1 1.00 1 1 0 0
...............................................................................................................................TACAATCTGTAGGGCCAAAACCCCTTA................. 27 0 1 1.00 1 0 1 0
........................................................................................................................TCCGAAATACAATCTGTAGGGCCAAAACC...................... 29 0 1 1.00 1 1 0 0
.............................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT................... 27 0 1 1.00 1 1 0 0
........................................................................................................................TCCGAAATACAATCTGTAGGGCCAAAA........................ 27 0 1 1.00 1 0 1 0
...............................................................................................TAGTTTACCACCACAAGTTGGCATT................................................... 25 1 1 1.00 1 1 0 0
...........TTACTCCGCTGTGGTGACATCC.......................................................................................................................................... 22 2 1 1.00 1 1 0 0
...................................................TCCGATTTGTCTGCACTGGTCTCTG............................................................................................... 25 0 1 1.00 1 1 0 0
.......................................................................................................................TTCCAAAATACAATCTGTAGGGCC............................ 24 1 1 1.00 1 1 0 0
........................................................................TCTGTGATTCTACCTGTCCCGAA............................................................................ 23 1 1 1.00 1 1 0 0
..................................................TTCCGATTTGTCTGCACTGGTCTC................................................................................................. 24 0 5 1.00 5 5 0 0
........................................................................................................................TCCGAAATACAATCTGTAGGGC............................. 22 0 1 1.00 1 1 0 0
...................................................TCCGATTTGTCTGCACTGGTCT.................................................................................................. 22 0 5 0.60 3 3 0 0
...................................................TCCGATTTGTCTGCACTGGTCTCT................................................................................................ 24 0 5 0.40 2 2 0 0
..................................................TTCCGATTTGTCTGCACTGGTCT.................................................................................................. 23 0 5 0.40 2 2 0 0
...................................................TCCGATTTGTCTGCACTGGTCTC................................................................................................. 23 0 5 0.40 2 2 0 0
...............................................................................TTCTACCTGTCCCGATTAGTTTACCAC................................................................. 27 0 3 0.33 1 1 0 0
................................................................................TCTACCTGTCCCGATTAGTTTACCACCA............................................................... 28 0 3 0.33 1 1 0 0
..................................................TTCCGATTTGTCTGCACTGTTC................................................................................................... 22 1 5 0.20 1 1 0 0
...............................................AGATTCCGATTTGTCTGCACTGGTC................................................................................................... 25 0 5 0.20 1 1 0 0
..................................................TTCCGATTTGTCTGCACTGGTCTT................................................................................................. 24 1 5 0.20 1 1 0 0
...............................................AGATTCCGATTTGTCTGCACTGGTCTC................................................................................................. 27 0 5 0.20 1 1 0 0
...................................................TCCGATTTGTCTGCACTGGTGTC................................................................................................. 23 1 7 0.14 1 1 0 0
........................................TTGCTAAAGATTCCGATTTGTCTGC.......................................................................................................... 25 0 7 0.14 1 1 0 0
....................................................CCGATTTGTCTGCACTGGTCTCT................................................................................................ 23 0 8 0.13 1 1 0 0
....................................................CCGATTTGTCTGCACTGGTC................................................................................................... 20 0 8 0.13 1 1 0 0

Anti-sense strand reads

CTCGTTAGGCTAATTAGGCGACACCACTTTAGGTGACACTAACGATTTCTAAGGCTAAACAGACGTGACCAGAGACACTAAGATGGACAGGGCTAATCAAATGGTGGTGTTCAACCGTGAAGGCTTTATGTTAGACATCCCGGTTTTGGGGAATGCCCCCAAGGTGATTTC
************************************..(((((.....((..(((((((((.((.(((((((.....(((.......)))..)))))))....))..)))))))))....)).......))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
.........................................................................................................GGTGTTCAACCGTGAAGGCTTTAT.......................................... 24 0 1 6.00 6 2 3 1 0
.................................TGACACTAACGATTTCTAAGGCTAAAC............................................................................................................... 27 0 1 4.00 4 3 1 0 0
.....TAGGCTAATTAGGCGACACCACTTT............................................................................................................................................. 25 0 1 3.00 3 0 3 0 0
........................................................................................................TGGTGTTCAACCGTGAAGGCTTTAT.......................................... 25 0 1 2.00 2 1 1 0 0
..CGTTAGGCTAATTAGGCGACACCACTTT............................................................................................................................................. 28 0 1 2.00 2 2 0 0 0
.........CTAATTAGGCGACACCACTTTAGGT......................................................................................................................................... 25 0 1 2.00 2 0 1 1 0
..CGTTAGGCTAATTAGGCGACACCACTT.............................................................................................................................................. 27 0 1 2.00 2 1 1 0 0
..................................GACACTAACGATTTCTAAGGCTAAAC............................................................................................................... 26 0 6 1.50 9 8 1 0 0
.................................TGACACTAACGATTTCTAAGGCTAAA................................................................................................................ 26 0 1 1.00 1 1 0 0 0
......................................................................AGAGACACTAAGATGGACAGGGCTAAT.......................................................................... 27 0 1 1.00 1 1 0 0 0
...GTTAGGCTAATTAGGCGACACCACTTT............................................................................................................................................. 27 0 1 1.00 1 0 0 1 0
.....TAGGCTAATTAGGCGACACCACTT.............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.........................................................................................................GGTGTTCAACCGTGAAGGCTTTATGT........................................ 26 0 1 1.00 1 1 0 0 0
..........................................................................................TGCTAATCAAATGGTGGTGTTCAA......................................................... 24 1 1 1.00 1 0 1 0 0
......................................................................................................................GAAGGCTTTATGTTAGACATC................................ 21 0 1 1.00 1 0 1 0 0
...........................................................................................................TGTTCAACCGTGAAGGCTTT............................................ 20 0 1 1.00 1 0 1 0 0
..CGTTAGGCTAATTAGGCGACACCACT............................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...................................................................ACCAGAGACACTAAGATGGACAGGGCT............................................................................. 27 0 1 1.00 1 1 0 0 0
..........................................................................................................GTGTTCAACCGTGAAGGCTTTAT.......................................... 23 0 1 1.00 1 1 0 0 0
...................................ACACTAACGATTTCTAAGGCTAAAC............................................................................................................... 25 0 6 1.00 6 6 0 0 0
........................................................................AGACACTAAGATGGACAGGGCTAATCA........................................................................ 27 0 1 1.00 1 1 0 0 0
................................................................................AGATGGACAGGGCTAATCAAATGG................................................................... 24 0 3 0.67 2 0 2 0 0
....................................CACTAACGATTTCTAAGGCTAAAC............................................................................................................... 24 0 6 0.67 4 4 0 0 0
.................................................................................................CAATTGGTGGTGTGCAAC........................................................ 18 2 2 0.50 1 0 0 1 0
..............................................................................TAAGATGGACAGGGCTAATCAAATGG................................................................... 26 0 3 0.33 1 0 1 0 0
.............................................................................CTAAGATGGACAGGGCTAATCAAATGG................................................................... 27 0 3 0.33 1 0 0 0 1
..................................GACACTAACGATTTCTAAGGCTAAACA.............................................................................................................. 27 0 6 0.33 2 2 0 0 0
.......................................................................................CAGGGCTAATCAAATGGTGGTGTT............................................................ 24 0 3 0.33 1 1 0 0 0
.................................................................................GATGGACAGGGCTAATCAAATG.................................................................... 22 0 3 0.33 1 1 0 0 0
................................................................................AGATGGACAGGGCTAATCAAATGGT.................................................................. 25 0 3 0.33 1 0 0 0 1
.............................................TTTCTAAGGCTAAACAGACGTGACCAG................................................................................................... 27 0 5 0.20 1 1 0 0 0
....................................CACTAACGATTTCTAAGGCTAAACA.............................................................................................................. 25 0 6 0.17 1 1 0 0 0
.....................................ACTAACGATTTCTAAGGCTAAAC............................................................................................................... 23 0 7 0.14 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_26:130754-130924 - dse_307 GAGCAAT---CCGAT---TAATCCGC-TGTGGTGA-AATCCA--C---TGTGATTGCTAAAGATTCCGATTTGTCTGCACTGGTCT---------------------------CTGTGATTCTACCTGTCCCGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CCGAAATACAATCTGTAGGGCCAAAACCCCT--TACGGGGGTTCCACTAAAG
droSim2 2r:2476884-2477063 + GAGTAAT---CCAAT---CAATCCGC-TGTGGAGGGAGACCACCC---TGGGATTGCTAACGATTCCGATTTGTCAGCACTGGTCTCTCAAC---------------------CAGTGATTCTACCTGTCCCGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGAAATACAATCTGTAGGGCCAAAACCCCT--TACGGTGGTTCCACTAAAG
dm3 chr2R:412204-412379 - GAGCAAT---CCGAT---CAATCGGC-TGTGTAAG-ACCCCACCC---TGTGATTGCTAAAAATTCCGAATTGTCTGCACTGGTGACTCAAC---------------------CAGTGATTCCACCTGTCTCGATTAGTTTACC--------------------------------------------------ACAAGTTGACACTT---------------CAGAAATACAATCTGCATGGCCAAAACCCCT--CGCGGTGGTTCCACTAAAG
droEre2 scaffold_4845:1649190-1649365 + GAG----------AT---CAATCGGT-TGTGGGGGGAGTCCAATT---TGGGATTGCTAGAGATTTCGCTTTGTCTGCACTGGTTT--GCAC---------------------CAGTGATTAAACCTGTCCCGATTAGTTTACC-A-----------C------------------------------ACAAGTGCAAGTTGGCCCTT---------------CAAAAACACAATCTGCAGTGCCAAAACCCCT--CACGGTGGTTTCACTAAAG
droYak3 v2_chrX_random_052:38030-38223 - GTGCAAT---CCGAT---CAATCGGT-TGTGGAGGGAGTCCAGCC---TGGGATTGCTACAGATTCCGCTATGTCCGCACTGGTTTCTCAAC---------------------CGGTGATTCCACCCGTCCCGAATTGTTTACC-A-----------CC---------------------ACCGGACTACCGGCACAAGTTGGCACTT---------------CAGAAATACAACCTGCAGTGCCAAAACCCCT--CTCGGTGGTTCCACTAAAG
droEug1 scf7180000407824:825-977 - GCA---T---CCGAA---CTCTCTGGACATGATGG-TAG----------GAAATCGTTAAAT-----AGTTTGTCTGCTTCAAGGC---------------------------CCCTGGCTCCTACAGAGCCAATTT----------CCATT-------------------------------------------AACATCAACCCAC---------------CCGATACACTGCAGGGGTATTTCGTGCCCCT--AAAGGTAATCCCACCTGAG
droBia1 scf7180000302377:80406-80558 - CAA---T---CTGAA---TTGCCTGC-AACC----------------------------------------------------------AAC---------------------TCAACATTTCATCCTTCATTAAGTACTTGCAGG-----------CCTTCT----GAT-AATTCTGATCCTATTCTGCCGGCACAAGTGGGTTTTA---------------CAGAATCACAATCTGCCGCACCAAAACCTCT--ATTAGTAGTTGTGCCAAAA
droTak1 scf7180000416013:1441-1604 - GATCAATTG----------------------------------------------------GGATCCGTATAATCCGTAGTAGA---CCCCC---------------------CTGTTGTTCCGCCCATTTCTAATAACTTGTC-A-----------CCTCCA----GGG-AATGTTGAGTCCGGTCTACCGGCACAAGTTGGCGCTG---------------CAGAAACTCAATCTGCAGTACCAA-ACCTCT--TTCAGTGGTTCAACCCAAA
droEle1 scf7180000491092:79701-79851 + AAC-ATT---TCGAT---CA--------------------------------------------------------------------CGACCAGTGATCCCTTTAAACACAAGTGTAAT----------TC-----TGATACC-G-----------CCACAA----TGA-AATATTGAGTCCGGACTACCAGCCCAAGTTGGTTCTG---------------CCTAAACTCAGTGTGGACTTCCAAAACTCGT--TTCTGTGGTTCGACTGAAT
droRho1 scf7180000769608:485-662 - GTA---T---CCGAA---CAATCCGT-AACAGAATGCATGCAACC---AGGGACTTCAAAGAATTCCGATTTGTCCGTAGTGGTTTCACAAT---------------------TAGTGGATCCACCTATCTCTCAGAATGTAGC-A-----------TCA----------------------------------TCAAGTTGGTTTTG---------------CAGAAACAATGTCTGTTCCACCAAAATCCCT--TTCGGTGGTTCCACTGAAG
droFic1 scf7180000453313:4010-4219 + GATCATT---CCGAT---CAATCCTC-AGTGGAGAGCGTTCAGAC---CGGCACCCCTAGCTTATCCGATTCGTCCGCACTGGTCATACAAC---------------------CAGTGATTCCACCTGCCCCAAATTGTTTACC-G-----------CCAAAA----GGG-AACTTTGAGGCCGGTTTACCGGCTCAAGTTGGTGTTG---------------CAGAAATACAAACTGTAGTGCCAAAACCCCT--TTCAGTGGTTCCACTAAAG
droKik1 scf7180000301906:12171-12367 + GTA---T---CCGAA---TACGTCGC-GGGTGAGACCGTGTCC-C---CGGTGTTGCC--CACTTCCGTTTTGTCCACTGGGG-GTCCCAAT---------------------TGTTGTCCTCTCAGAGCCCTAA----------------TCCAAGTCC-CTGC--CAG-GGTATCAGGCCCGGACTACCGGCCGAATGTGGTAT------------------GGTGGGTCAGTCTGCCGTGCCAAAACCCCT--TACGGCAATTCCACCAACA
droAna3 scaffold_13417:4005070-4005247 + GAGCTATGGTCCGAT---ATGTCCTC-TGTGGTAT---------------------------------------------------AGCTTC---------------------AAGTGATCCCAG----ACCTAATAATTCAAA-CTCCCGTAACAGTCACCGAAGAGGGTAATCAACAGTCCGGACT-CCGGTACGAATTGATGCCG---------------CAGTATTAGTTACGGTGGCACCAAAACCATCGAAACGGTGATCCCATTATCG
droBip1 scf7180000394153:8393-8559 + GAGCAATTGTCTGAGCAAATGTCCTC-TGTGGTA----TCCT--C---TGTGGTAATAAATGAAC-----------------------------------------------------------------CCCTG----------------TCAGAGTCACCTAAAAGGGTATTCCACAGTCCGGACCACCGGCACCGACTGATGCTG---------------CAGTTCTCGTACCTGCGACACCAAACCCCTT--ACAGGTGATTCCTCCATCA
dp5 Unknown_group_84:13452-13640 - GTA---G---CCGAA---TTCATCGC-CTCGGAGAATGTGCAGCC---AAGTACGTCTGCAGCGTCCGTGGTGTCCGCAAG------TTCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------CCACCA----GTA-AATAGACGTTCCGGACCTCCG---GATATTGCCACCA---------------CAGGTACTAGACCTGTGGTGACTAAGCCACT--GGTGGGAGTCCCACCAAAA
droPer2 scaffold_125:33253-33418 + GCA--GT---CCAGT---ACATCTGC-AGCGTCTA-T--------------------------GTCCGTGGTGTCCGCAAG------TTCGC---------------------TTGTTGTCCCGTCTTTCCGAATC---------------------CCACCA----GTG-ATAAGAAGTTCCGGACCTCCG---GATATTGCCACCA---------------CAGGAACTAGGCCTGTGGCGCCTAAGCCGCT--GGTGGGAGTCCCACCAAAA
droWil2 scf2_1100000004958:1430009-1430103 - CTGT-----------------------------------------------------------------------------------------------------------------AGTGCCACTTGTTGCAACTGACTCTAC-----------------------------------------------A---ATTAATGCGGTAG---------------CTGATGCAATACCTGGAATGCCGAGACCATT--GGTGGGTTTGTCTCCTAAA
droVir3 scaffold_12728:105427-105596 + ATTT-AT---CCGTG---TCGTCCGC-TGTCATAGAAGT-TA--CGAAA----GGGCGATGGCAACAATTAAATT--------------------------------------------------------------TACAACA-G-----------CCCCTA----GAA-GGCTTGTCGTCCGGACTACCGGCTGCTTTAGGTACCACAGCTAATAGTGTTCCCACTGCCCTACCTGTGGCGCCTACACCTGT--AGTGGGTGTT---------
droMoj3 scaffold_6541:819021-819032 - GTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCCTAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GAGCAAT---CCGAT---TAATCCGC-TGTGGTGA-AATCCA--C---TGTGATTGCTAAAGATTCCGATTTGTCTGCACTGGTCT---------------------------CTGTGATTCTACCTGTCCCGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CCGAAATACAATCTGTAGGGCCAAAACCCCT--TACGGGGGTTCCACTAAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................25113.001310021
......................................................................................................................................TTAGTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................2617.0076010
..............................................................................................................................................................................................................TT---------------CCGAAATACAATCTGTAGGGCC..............................2414.0044000
..............................................................................................................................................................................................................TT---------------CCGAAATACAATCTGTAGGGCCAA............................2613.0033000
...............................................................................................................................................................................................................T---------------CCGAAATACAATCTGTAGGGCCAA............................2513.0033000
........................................................................................................................................AGTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................2413.0033000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCAC.....................................................................2412.0022000
..............................................................................................................................................................................................................TT---------------CCGAAATACAATCTGTAGGGCCA.............................2512.0022000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCA......................................................................2312.0021010
......................................................................................................................................TTAGTTTACC-----------------------------------------------ACCACAAGTTGGCAC.....................................................................2512.0022000
.....................................................................................T---------------------------CTGTGATTCTACCTGTCCCG..............................................................................................................................................2111.0011000
...............................................................................................................................................................................................................T---------------CCGAAATACAATCTGTAGGGCCAAAAC.........................2811.0011000
................................................................................................................................................................................................................................CGAAATACAATCTGTAGGGCCAAAAC.........................2611.0011000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGG........................................................................2111.0010010
..................TAATCCGC-TGTGGTGA-AATCCA--C---TG.................................................................................................................................................................................................................................2511.0011000
.....................................................................................................................................................................................................................................TACAATCTGTAGGGCCAAAACCCCT--...................2511.0011000
.....................................................................................................................................................................................................................................TACAATCTGTAGGGCCAAAACCCCT--TA.................2711.0010010
...............................................................................................................................................................................................................T---------------CCGAAATACAATCTGTAGGGCCAAAACC........................2911.0011000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT--...................2711.0011000
...............................................................................................................................................................................................................T---------------CCGAAATACAATCTGTAGGGCCAAAA..........................2711.0010010
................................................................TCCGATTTGTCTGCACTGGTCT---------------------------CTG...............................................................................................................................................................2511.0011000
.....................................................................................T---------------------------CTGTGATTCTACCTGTCCCGAA............................................................................................................................................2311.0011000
...............................................................TTCCGATTTGTCTGCACTGGTCT---------------------------C.................................................................................................................................................................2451.0055000
...............................................................................................................................................................................................................T---------------CCGAAATACAATCTGTAGGGC...............................2211.0011000
................................................................TCCGATTTGTCTGCACTGGTCT---------------------------..................................................................................................................................................................2250.6033000
................................................................TCCGATTTGTCTGCACTGGTCT---------------------------CT................................................................................................................................................................2450.4022000
...............................................................TTCCGATTTGTCTGCACTGGTCT---------------------------..................................................................................................................................................................2350.4022000
................................................................TCCGATTTGTCTGCACTGGTCT---------------------------C.................................................................................................................................................................2350.4022000
.......................................................................................................................TTCTACCTGTCCCGATTAGTTTACC-----------------------------------------------AC..................................................................................2730.3311000
........................................................................................................................TCTACCTGTCCCGATTAGTTTACC-----------------------------------------------ACCA................................................................................2830.3311000
............................................................AGATTCCGATTTGTCTGCACTGGTC..............................................................................................................................................................................................2550.2011000
...............................................................TTCCGATTTGTCTGCACTGGTCT---------------------------T.................................................................................................................................................................2450.2011000
............................................................AGATTCCGATTTGTCTGCACTGGTCT---------------------------C.................................................................................................................................................................2750.2011000
.....................................................TTGCTAAAGATTCCGATTTGTCTGC.....................................................................................................................................................................................................2570.1411000
.................................................................CCGATTTGTCTGCACTGGTCT---------------------------CT................................................................................................................................................................2380.1311000
.................................................................CCGATTTGTCTGCACTGGTC..............................................................................................................................................................................................2080.1311000
droSim2
GAGTAAT---CCAAT---CAATCCGC-TGTGGAGGGAGACCACCC---TGGGATTGCTAACGATTCCGATTTGTCAGCACTGGTCTCTCAAC---------------------CAGTGATTCTACCTGTCCCGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGAAATACAATCTGTAGGGCCAAAACCCCT--TACGGTGGTTCCACTAAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................TCCGATTTGTCAGCACTGGTCTCTCAAC---------------------C.................................................................................................................................................................29135.0035006000211700000000
................................................................TCCGATTTGTCAGCACTGGTCTCTCAAC---------------------..................................................................................................................................................................28131.0031002200172521000000
...TAAT---CCAAT---CAATCCGC-TGTGGAGGGA..............................................................................................................................................................................................................................................27113.001300000061501000000
................................................................TCCGATTTGTCAGCACTGGTCTCT...........................................................................................................................................................................................2419.00900510010002000000
................................................................TCCGATTTGTCAGCACTGGTCTCTC..........................................................................................................................................................................................2519.00900130020102000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................2518.00800020020004000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT--...................2718.00800000061001000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGC...............................2217.00700000000106000000
.........................................................TAACGATTCCGATTTGTCAGCACT..................................................................................................................................................................................................2417.00700300031000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCC..............................2316.00600410000100000000
................................................................TCCGATTTGTCAGCACTGGTCTCTCA.........................................................................................................................................................................................2616.00600010020102000000
...............................................................TTCCGATTTGTCAGCACTGGTCTCTCAAC---------------------C.................................................................................................................................................................3016.00600000033000000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGA................................................2815.00500000030110000000
...............................................................TTCCGATTTGTCAGCACTGGTCTCTC..........................................................................................................................................................................................2615.00500000011210000000
...............................................................TTCCGATTTGTCAGCACTGGTCTCTCAAC---------------------..................................................................................................................................................................2915.00500000022001000000
.....................................................................................................................................................................................................................................TACAATCTGTAGGGCCAAAACCCCT--TA.................2715.00500010010201000000
.........................................................TAACGATTCCGATTTGTCAGCACTGGT...............................................................................................................................................................................................2714.00400000010210000000
............................................................CGATTCCGATTTGTCAGCACTGGTC..............................................................................................................................................................................................2514.00400100030000000000
....AAT---CCAAT---CAATCCGC-TGTGGAGGGA..............................................................................................................................................................................................................................................2614.00400000030100000000
.............................TGGAGGGAGACCACCC---TGGGATTGC..........................................................................................................................................................................................................................2514.00400000000003100000
..............................................................................................................................................................................................................TT---------------CAGAAATACAATCTGTAGGGC...............................2314.00400000003010000000
......T---CCAAT---CAATCCGC-TGTGGAGGGAGA............................................................................................................................................................................................................................................2614.00400000040000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCAA............................2513.00300000000201000000
................................................................................................................................................................................................................................AGAAATACAATCTGTAGGGCCAAAACC........................2713.00300000030000000000
................................................................TCCGATTTGTCAGCACTGGT...............................................................................................................................................................................................2013.00300001000002000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCC.......................2513.00300000010002000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------C...................................................2513.00300000000003000000
......................................................................................................................................................................................................................................ACAATCTGTAGGGCCAAAACCCCT--TA.................2613.00300000000003000000
............................................................CGATTCCGATTTGTCAGCACTGGT...............................................................................................................................................................................................2413.00300000030000000000
......T---CCAAT---CAATCCGC-TGTGGAGGGAGAC...........................................................................................................................................................................................................................................2713.00300000000000030000
......T---CCAAT---CAATCCGC-TGTGGAGGGAG.............................................................................................................................................................................................................................................2513.00300000010001010000
.....................TCCGC-TGTGGAGGGAGACCACCC---TGGG...............................................................................................................................................................................................................................2713.00300210000000000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCAC.....................................................................2413.00300020000000010000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCT......................................................................2113.00300000010101000000
..........................................................................................................................................TTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGA................................................2712.00200000020000000000
......T---CCAAT---CAATCCGC-TGTGGAGGGA..............................................................................................................................................................................................................................................2412.00200000010100000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGT...........................................................................1812.00200000000002000000
.........................................................TAACGATTCCGATTTGTCAGCAC...................................................................................................................................................................................................2312.00200000010100000000
..............T---CAATCCGC-TGTGGAGGGAGACCACCC---...................................................................................................................................................................................................................................2712.00200000000110000000
...............................................................................................................................................................................................................................CAGAAATACAATCTGTAGGGCCAAAAC.........................2712.00200000010001000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT--T..................2812.00200000000101000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGAA...............................................2912.00200000020000000000
.....AT---CCAAT---CAATCCGC-TGTGGAGGGA..............................................................................................................................................................................................................................................2512.00200000000101000000
................................................................TCCGATTTGTCAGCACTGGTCTCTCAA........................................................................................................................................................................................2712.00200000010001000000
..................CAATCCGC-TGTGGAGGGAGACCACCC---...................................................................................................................................................................................................................................2612.00200000011000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCA.............................2412.00200000000200000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................2312.00200000000200000000
.........................................................TAACGATTCCGATTTGTCAGCACTGGTC..............................................................................................................................................................................................2812.00200000001100000000
..GTAAT---CCAAT---CAATCCGC-TGTGGAGGGA..............................................................................................................................................................................................................................................2812.00200000020000000000
................................................TGGGATTGCTAACGATTCCGATTTGTCAGC.....................................................................................................................................................................................................3012.00200000001100000000
......T---CCAAT---CAATCCGC-TGTGGAGGG...............................................................................................................................................................................................................................................2312.00200000000101000000
...................AATCCGC-TGTGGAGGGAGACCACCC---...................................................................................................................................................................................................................................2512.00200000000002000000
...TAAT---CCAAT---CAATCCGC-TGTGGAGG................................................................................................................................................................................................................................................2512.00200000020000000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCC......................2612.00200010000001000000
................................................................................................................................................................................................................................AGAAATACAATCTGTAGGGCCAAAAC.........................2612.00200000020000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCAAAACC........................2911.00100010000000000000
..............................GGAGGGAGACCACCC---TGGGATTGC..........................................................................................................................................................................................................................2411.00100000000001000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACC........................2411.00100000010000000000
...................................................................................................................................CGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCA......................................................................2711.00100000001000000000
...........................TGTGGAGGGAGACCACCC---TGGGA..............................................................................................................................................................................................................................2311.00100000000001000000
.....................................................................................................................................................................................................................................TACAATCTGTAGGGCCA.............................1711.00100000010000000000
......................................................................TTGTCAGCACTGGTCTCTCAAC---------------------CAG...............................................................................................................................................................2511.00100000010000000000
..................................................................................................................................CCGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGC.......................................................................2711.00100000000010000000
......................................................TGCTAACGATTCCGATTTGTCAG......................................................................................................................................................................................................2311.00100000001000000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT--TA.................2911.00100000010000000000
...................AATCCGC-TGTGGAGGGAGACCACCC---A..................................................................................................................................................................................................................................2611.00100000000001000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCACC....................................................................2511.00100100000000000000
..............T---CAATCCGC-TGTGGAGGGAGACCACC.......................................................................................................................................................................................................................................2611.00100000000010000000
...............................................................TTCCGATTTGTCAGCACTGGA...............................................................................................................................................................................................2111.00100000000000010000
..............................................................................................................................................................................................................TT---------------CAGAAATACAATCTGTAGGGCCA.............................2511.00100000000001000000
...................AATCCGC-TGTGGAGGGAGACCACCC---TG.................................................................................................................................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGC...............................1711.00100000000001000000
...................................................................................................................................CGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGC.......................................................................2611.00100000001000000000
................................................................TCCGATTTGTCAGCACTG.................................................................................................................................................................................................1811.00100000000001000000
...........................TGTGGAGGGAGACCACCC---TGGGATTGC..........................................................................................................................................................................................................................2711.00100000000001000000
.AGTAAT---CCAAT---CAATCCGC-TGTGGAGG................................................................................................................................................................................................................................................2711.00100000000100000000
................................................................TCCGATTTGTCAGCACTGG................................................................................................................................................................................................1911.00100000000000010000
................................................................TCCGATTTGTCAGCACTGGTCTC............................................................................................................................................................................................2311.00100100000000000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCA......................................................................2311.00100000010000000000
............................................................................................................................................................................................................................................TGTAGGGCCAAAACCCCT--TACGGTGGA..........2711.00100000001000000000
.............................TGGAGGGAGACCACCC---TGGG...............................................................................................................................................................................................................................2011.00100000000001000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGAAA..............................................3011.00100000010000000000
................................................................TCCGATTTGTCAGCACTGGTCT.............................................................................................................................................................................................2211.00100000000000001000
...........................................................ACGATTCCGATTTGTCAGCACTGGTCT.............................................................................................................................................................................................2711.00100000010000000000
..................................................................CGATTTGTCAGCACTGGTCTCTCAAC---------------------C.................................................................................................................................................................2711.00100000010000000000
......................................................................................................................................................................................................................................ACAATCTGTAGGGCCAAAACCC.......................2211.00100000000001000000
.......................................................................................................................................................................................................................................CAATCTGTAGGGCCAAAACCC.......................2111.00100000000100000000
..............................GGAGGGAGACCACCC---TGGGATTGCT.........................................................................................................................................................................................................................2511.00100000000001000000
.........................................................TAACGATTCCGATTTGTCAGCACTGGG...............................................................................................................................................................................................2711.00100100000000000000
...............................................................TTCCGATTTGTCAGCACTGGTCTCTCT.........................................................................................................................................................................................2711.00100100000000000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACA........................2411.00100000000000010000
..........................................................AACGATTCCGATTTGTCAGCACTGGTC..............................................................................................................................................................................................2711.00100100000000000000
................................................TGGGATTGCTAACGAT...................................................................................................................................................................................................................1611.00100000000001000000
..............................................................................................................................TGTCCCGATTAGTTTACC-----------------------------------------------ACCACAAGTT..........................................................................2811.00100000001000000000
....................................................................................................................................................................................................................................ATACAATCTGTAGGGCCAAAACCCCT--TA.................2811.00100000000001000000
.........................................................................................................................................GTTTACC-----------------------------------------------ACCACAAGTTGGCAC.....................................................................2211.00100000010000000000
...............................................................TTCCGATTTGTCAGCACTGGTCTCT...........................................................................................................................................................................................2511.00100000000001000000
........................................................................................................................................................................................................TGGCACTT---------------CAGAAATACAATCTGTA...................................2511.00100000010000000000
..................................................................................................................................CCGATTAGTTTACC-----------------------------------------------ACCACAAGT...........................................................................2311.00100000001000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGG................................2111.00100000001000000000
.............................................................GATTCCGATTTGTCAGCACTGGTC..............................................................................................................................................................................................2411.00100100000000000000
.................................................................................................................................................................................................................................GAAATACAATCTGTAGGGCCAAAACC........................2611.00100000000100000000
..................................................................................................................................................................................................................................AAATACAATCTGTAGGGCCAAAAC.........................2411.00100000010000000000
........................................................................................................................................AGTTTACC-----------------------------------------------ACCACAAGTTGGCA......................................................................2211.00100000010000000000
......T---CCAAT---CAATCCGC-TGTGGAGGGAGACC..........................................................................................................................................................................................................................................2811.00100000010000000000
..........................................................AACGATTCCGATTTGTCAGCACT..................................................................................................................................................................................................2311.00100000001000000000
...............................................................TTCCGATTTGTCAGCACTGGTC..............................................................................................................................................................................................2211.00100000001000000000
...............................................................................................................................................................................................................................CAGAAATACAATCTGTAGGGCCAA............................2411.00100010000000000000
................................................................TCCGATTTGTCAGCACTGGTCTCC...........................................................................................................................................................................................2411.00100100000000000000
...................AATCCGC-TGTGGAGGGAGACCACC.......................................................................................................................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCAAAA..........................2711.00100000000100000000
..............T---CAATCCGC-TGTGGAGGGAGA............................................................................................................................................................................................................................................2111.00100000000001000000
.............................TGGAGGGAGACCACCC---TGGGATT............................................................................................................................................................................................................................2311.00100000000001000000
..........................................................................................................................................................................................................................................TCTGTAGGGCCAAAACCCCT--TACGGTGGT..........2911.00100000000001000000
................................................................TCCGATTTGTCAGCACT..................................................................................................................................................................................................1711.00100000000001000000
...................................................................................................................................CGATTAGTTTACC-----------------------------------------------ACCACAAGTTGGCT......................................................................2711.00100000001000000000
.....................................................................................................................................................................................................................................TACAATCTGTAGGGCCAAAACCCCT--...................2511.00100000000001000000
........................................................................................................................................AGTTTACC-----------------------------------------------ACCACAAGTTGGCAC.....................................................................2311.00100000000100000000
..............................................................................................................................................................................................................TT---------------CAGAAATACAATCTGTAGGG................................2211.00100000001000000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------....................................................2611.00100000000001000000
......................................................................................................................................................................................................................................ACAATCTGTAGGGCCAAAACCCCT--T..................2511.00100000000001000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCT.............................2411.00101000000000000000
.......................CGC-TGTGGAGGGAGACCACCC---TGGGAT.............................................................................................................................................................................................................................2711.00100000000001000000
..............................................................................................................................................................................................................TT---------------CAGAAATACAATCTGTAGGGCCAAA...........................2711.00100000001000000000
...TAAT---CCAAT---CAATCCGC-TGTGGAGGG...............................................................................................................................................................................................................................................2611.00100000000100000000
........................................................................................................................................AGTTTACC-----------------------------------------------ACCACAAGTTGGCACT....................................................................2411.00100000010000000000
........................................................................................................................................AGTTTACC-----------------------------------------------ACCACAAGTTGGCACTT---------------CAGA................................................2911.00100000010000000000
...............................................................................................................................................................................................................T---------------CAGAAATACAATCTGTAGGGCCAAA...........................2611.00100000010000000000
.......................................................................TGTCAGCACTGGTCTCTCAAC---------------------C.................................................................................................................................................................2211.00100000000001000000
.........................................................................................................................................................................................................................................ATCTGTAGGGCCAAAACCCCT--T..................2211.00100000000001000000
..........................................................AACGATTCCGATTTGTCAGCACTGGT...............................................................................................................................................................................................2611.00100000000010000000
......T---CCAAT---CAATCCGC-TGTGGAGGGAGACCA.........................................................................................................................................................................................................................................2911.00100000010000000000
................................................................TCCGATTTGTCAGCACTGGTCTCTCAAT---------------------..................................................................................................................................................................2820.50100000000010000000
...........................TGTGGAGGGAGACCACC.......................................................................................................................................................................................................................................1720.50100000000001000000
................................................................................TGGTCTCTCAAC---------------------CAGTGATTCTACC.....................................................................................................................................................25110.45500010001000021000
................................................................................TGGTCTCTCAAC---------------------CAGTGATTCTACCTGT..................................................................................................................................................28100.40400000000400000000
....................................................................................................................TGATTCTACCTGTCCCGATTAGTTT......................................................................................................................................25100.30300000000102000000
....................................................................................................................TGATTCTACCTGTCCCGATTAGTT.......................................................................................................................................24100.20200000000200000000
..................................................................................................................AGTGATTCTACCTGTCCCGATTAGTTT......................................................................................................................................27100.20200000010100000000
..................................................................................................................AGTGATTCTACCTGTCCCGATTAGTT.......................................................................................................................................26100.20200000000002000000
...................................................................................TCTCTCAAC---------------------CAGTGATTCTACCTGTCCCG..............................................................................................................................................2980.13100000010000000000
.....................................................................................TCTCAAC---------------------CAGTGATTCTACCTGTCCCGATT...........................................................................................................................................3080.13100000010000000000
.....................................................................................TCTCAAC---------------------CAGTGATTCTACCTGTCCCGA.............................................................................................................................................2880.13100000010000000000
.......................................................................................TCAAC---------------------CAGTGATTCTACCTGTCCCGATA...........................................................................................................................................2880.13100000010000000000
.....................................................................................TCTCAAC---------------------CAGTGATTCTACCTGTCCC...............................................................................................................................................2680.13100010000000000000
...................................................................................TCTCTCAAC---------------------CAGTGATTCTACCTGTCC................................................................................................................................................2790.11100010000000000000
.....................................................................................TCTCAAC---------------------CAGTGATTCTACCTGTCC................................................................................................................................................2590.11100000010000000000
...................................................................................................................................................................................................................................AATACAATCTGTAGGGCCAAAACCCCT--C..................28180.11200000020000000000
....................................................................................................................TGATTCTACCTGTCCCGAT............................................................................................................................................19100.10100010000000000000
..............T---CAATCCGC-TGTGGAGGGAC.............................................................................................................................................................................................................................................20100.10100000000100000000
........................................................................................................................TCTACCTGTCCCGATTA..........................................................................................................................................17100.10100000010000000000
.......................................................................................................................................TAGTTTACC-----------------------------------------------ACCACAAG............................................................................17200.10200000000002000000
................................................................................TGGTCTCTCAAC---------------------CAGTGATTCTACCTG...................................................................................................................................................27100.10100000000100000000
......................................................................................................................ATTCTACCTGTCCCGATTA..........................................................................................................................................19100.10100000010000000000
.................................................................................................................CAGTGATTCTACCTGTCCCGATTAGTT.......................................................................................................................................27100.10100000000100000000
....................................................................................................................TGATTCTACCTGTCCCGAAA...........................................................................................................................................20100.10100000000001000000
..................................................................................................................AGTGATTCTACCTGTCCCGAT............................................................................................................................................21100.10100000000000001000
.................................................................................................................CAGTGATTCTACCTGTCC................................................................................................................................................18120.08100000000001000000
........................................................................................................................................................................................................TGGCACTT---------------CAGAAATACAATCTG.....................................23150.07100000000000010000
...................................................................................................................................................................................................CAAGTTGGCACTT---------------CAGAAATACAATC.......................................26160.06100000000000001000
.................................................................................................................................................................................................CACAAGTTGGCACTT---------------CAGAAATACAA.........................................26170.06100000001000000000
..................................................................................................................................................................................................ACAAGTTGGCACTT---------------CAGAAATACAA.........................................25180.06100000000000010000
...................................................................................................................................................................................................CAAGTTGGCACTT---------------CAGAAAT.............................................20200.05100000010000000000
............................................................................................................................................................................................................ACTT---------------CAGAAATACAAT........................................16200.05100000001000000000
..............................................................................................................................................................................................................TT---------------CAGAAATACAATCT......................................16200.05100000000001000000
..................................................................................................................................................................................................ACAAGTTGGCACTT---------------CAGAAAT.............................................21200.05100000010000000000
....................................................................................................................................................................................................AAGTTGGCACTT---------------CAGAAATACA..........................................22200.05100000001000000000
...................................................................................................................................................................................................CAAGTTGGCACTT---------------CAGAAA..............................................19200.05100000001000000000
...................................................................................................................................CGATTAGTTTACC-----------------------------------------------ACCACAAG............................................................................21200.05100000000000100000
dm3
GAGCAAT---CCGAT---CAATCGGC-TGTGTAAG-ACCCCACCC---TGTGATTGCTAAAAATTCCGAATTGTCTGCACTGGTGACTCAAC---------------------CAGTGATTCCACCTGTCTCGATTAGTTTACC--------------------------------------------------ACAAGTTGACACTT---------------CAGAAATACAATCTGCATGGCCAAAACCCCT--CGCGGTGGTTCCACTAAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................TCCGAATTGTCTGCACTGGTGACT...........................................................................................................................................................................................24432.50130000000000000000000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000001000000000000000000000000010100000000000010000000000000000000000000000000000010000000100121488340000000000000006160711120000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
......................................................................................................................................TTAGTTTACC--------------------------------------------------ACAAGTTGACACTT---------------CAGA................................................28320.33610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000016001168180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TTCCGAATTGTCTGCACTGGTGACT...........................................................................................................................................................................................25419.0076000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000100000000000320000000000000000000000000000000001000000001224580000000000000001211407442000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATTGTCTGCACTGGTGACT...........................................................................................................................................................................................20416.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051372900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T---CCGAT---CAATCGGC-TGTGTAAG-ACCC...........................................................................................................................................................................................................................................26215.00300000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000050305680000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTCTGCACTGGTGACT...........................................................................................................................................................................................19412.50500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471211600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCCGAATTGTCTGCACTGGTGACTC..........................................................................................................................................................................................25410.004000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000010101000000000000000313066120000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................TGTGTAAG-ACCCCACCC---TGTGATTGC..........................................................................................................................................................................................................................2649.00360000000000000000000000000000000000000010000000000000000000000000000000000000000000110000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000100000000050000000120503640000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000100000000
...............................................................TTCCGAATTGTCTGCACTGGTGA.............................................................................................................................................................................................2349.00360000000000000000000000020000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024000100004100000000000000000000000000000000020002003010000001000000000000011310020000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................TTCCGAATTGTCTGCACTGGTG..............................................................................................................................................................................................2248.253300000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000104500000000000000000000000000000000000100000030000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATTGTCTGCACTGGTGACTCAAC---------------------C.................................................................................................................................................................2547.753100000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000700081110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAAT---CCGAT---CAATCGGC-TGTGTA..................................................................................................................................................................................................................................................2427.50150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010001300000200700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TTCCGAATTGTCTGCACTGGTGAC............................................................................................................................................................................................2445.75230000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002000000000000000100000000000000000000000000000000000000000000000000000000000000040801010000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
...............................................................TTCCGAATTGTCTGCACTGGTGACTC..........................................................................................................................................................................................2645.50220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000080111070000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.....................TCGGC-TGTGTAAG-ACCCCACCC---TGTGAT.............................................................................................................................................................................................................................2825.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.AGCAAT---CCGAT---CAATCGGC-TG......................................................................................................................................................................................................................................................2125.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000010
......................................................................................................................................TTAGTTTACC--------------------------------------------------ACAAGTTGACACT....................................................................2334.67140000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000150010011010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................TCCGAATTGTCTGCACTGGTGACTCAAC---------------------..................................................................................................................................................................2844.50180000000000000000000000000000000000000010000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030013420000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
......................................................................................................................................TTAGTTTACC--------------------------------------------------ACAAGTTGACAC.....................................................................2234.33130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100208000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATTGTCTGCACTGGTGACTCAAC---------------------CA................................................................................................................................................................2644.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030203700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......T---CCGAT---CAATCGGC-TGTGTAAG-ACCCC..........................................................................................................................................................................................................................................2724.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010001230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................TCCGAATTGTCTGCACTGGTGACTCAC........................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCCGAATTGTCTGCACTGGTGACAT..........................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AATTCCGAATTGTCTGCACTGGTGACT...........................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TGTCTGCACTGGTGACTCAAC---------------------..................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCCGAATTGTCTGCACTGGTGACTCAAA---------------------..................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATTGTCTGCACTGGTGACTCAAC---------------------ATC...............................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAAG-ACCCCACCC---TGTGATTGC..........................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTGTCTGCACTGGTGACTC..........................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTCTGCACTGGTGACTCAAC---------------------CAGA..............................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAAG-ACCCCACCC---TGTGATTGCTAAA......................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGTGATTCCACCTGTCTCGATTAGTT.......................................................................................................................................26200.2550000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AATTGTCTGCACTGGTGACTCAAC---------------------CAGA..............................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CCC---TGTGATTGCTAAAAATTCCGAATT...........................................................................................................................................................................................................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GATTGCTAAAAATTCCGAATTGTC........................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................ATTCCGAATTGTCTGCACTGGTGACT...........................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GAATTGTCTGCACTGGTGACT...........................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................TTGTCTGCACTGGTGACT...........................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AAATTCCGAATTGTCTGCACTGGTGACA...........................................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CGAATTGTCTGCACTGGTGACTC..........................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TAAG-ACCCCACCC---TGTGATTG...........................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCCGAATTGTCTGCACTGGTGACTCATT---------------------..................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AAATTCCGAATTGTCTGCACTGGTGAT............................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TCAAC---------------------CAGTGATTCCACCTGTCTCG..............................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAG----------AT---CAATCGGT-TGTGGGGGGAGTCCAATT---TGGGATTGCTAGAGATTTCGCTTTGTCTGCACTGGTTT--GCAC---------------------CAGTGATTAAACCTGTCCCGATTAGTTTACC-A-----------C------------------------------ACAAGTGCAAGTTGGCCCTT---------------CAAAAACACAATCTGCAGTGCCAAAACCCCT--CACGGTGGTTTCACTAAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................AAAAACACAATCTGCAGTGCC..............................2140.2511000000
..............................................................................................................................................................................................................TT---------------CAAAAACACAATCTGCAGT.................................2140.2510000010
droYak3
GTGCAAT---CCGAT---CAATCGGT-TGTGGAGGGAGTCCAGCC---TGGGATTGCTACAGATTCCGCTATGTCCGCACTGGTTTCTCAAC---------------------CGGTGATTCCACCCGTCCCGAATTGTTTACC-A-----------CC---------------------ACCGGACTACCGGCACAAGTTGGCACTT---------------CAGAAATACAACCTGCAGTGCCAAAACCCCT--CTCGGTGGTTCCACTAAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................TATGTCCGCACTGGTTTCTCAAC---------------------CGG...............................................................................................................................................................2682.1317010000000016
....................................................................................................................................GAATTGTTTACC-A-----------CC---------------------ACCGGACTACC....................................................................................2611.00100100000000
.....................................................TTGCTACAGATTCCGCTATGTCCGCAC...................................................................................................................................................................................................2790.67605100000000
.....................................................TTGCTACAGATTCCGCTATGTCCGC.....................................................................................................................................................................................................2590.56503200000000
.....................................................TTGCTACAGATTCCGCTATGTCC.......................................................................................................................................................................................................2390.44404000000000
.....................................................TTGCTACAGATTCCGCTATGTCCG......................................................................................................................................................................................................2490.33302100000000
......................................................TGCTACAGATTCCGCTATGTCCGCAC...................................................................................................................................................................................................2690.22202000000000
......................................TCCAGCC---TGGGATTGCTACAGATTCCGC..............................................................................................................................................................................................................2890.22201100000000
............................................................................................................................................................................................ACCGGCACAAGTTGGCACTT---------------CAGAAA..............................................26200.20400000000004
.....................................................................................................................................................................................................................................TACAACCTGCAGTGCCAAAACCCCT--C..................26200.20404000000000
.....................................................TTGCTACAGATTCCGCTATGTC........................................................................................................................................................................................................22100.20200020000000
................................................................................................................................................................................................................................AGAAATACAACCTGCAGTGCCAAAACCC.......................28200.15303000000000
..............................................................ATTCCGCTATGTCCGCACTGG................................................................................................................................................................................................2190.11101000000000
...........................................................CAGATTCCGCTATGTCCGCACTGG................................................................................................................................................................................................2490.11100100000000
.....................................................TTGCTACAGATTCCGCTATGTCCGCA....................................................................................................................................................................................................2690.11101000000000
.......................................CCAGCC---TGGGATTGCTACAGATTCCGC..............................................................................................................................................................................................................2790.11101000000000
.................................................................CCGCTATGTCCGCACTGGTTTCTCA.........................................................................................................................................................................................2590.11101000000000
.............................................................GATTCCGCTATGTCCGCACTGGTTA.............................................................................................................................................................................................2590.11101000000000
.............................................................................................................................................................................................................................................GCAGTGCCAAAACCCCT--CTCGGTGGT..........26200.10200000000002
......T---CCGAT---CAATCGGT-TGTGGAGGGA..............................................................................................................................................................................................................................................24200.10200200000000
........................................CAGCC---TGGGATTGCTACAGATTCCGCA.............................................................................................................................................................................................................27100.10101000000000
.TGCAAT---CCGAT---CAATCGGT-TGTGGAG.................................................................................................................................................................................................................................................26200.05101000000000
...........................................................................................................................................................................................TACCGGCACAAGTTGGCACTT---------------CAGAAA..............................................27200.05101000000000
....................................................................................TTCTCAAC---------------------CGGTGATTCCACCCGTCC................................................................................................................................................26200.05100100000000
........................................................................................................................TCCACCCGTCCCGAATTGTTTACC-..................................................................................................................................24200.05100100000000
.....................TCGGT-TGTGGAGGGAGTCCAGCC---T..................................................................................................................................................................................................................................24200.05100100000000
....................................................................................TTCTCAAC---------------------CGGTGATTCCACCCGTC.................................................................................................................................................25200.05101000000000
.....................................................................................TCTCAAC---------------------CGGTGATTCCACCCGTCC................................................................................................................................................25200.05101000000000
................................................................................................................................................................................................................................AGAAATACAACCTGCAGTGCC..............................21200.05100100000000
..................................................................................................................................................................................................................................AAATACAACCTGCAGTGCCAAAACCCC......................27200.05101000000000
......................................................................................................................................................................................................................................ACAACCTGCAGTGCCAAAACCCCT--C..................25200.05100100000000
......T---CCGAT---CAATCGGT-TGTGGAGGGAGT............................................................................................................................................................................................................................................26200.05100100000000
.....................................................................................................................................................................................CCGGACTACCGGCACAAGTTGGCACTT---------------C...................................................28200.05101000000000
...........................................................................................................................................................................................TACCGGCACAAGTTGGCACTT---------------CAGA................................................25200.05101000000000
................................................................................................................................................................................................................................AGAAATACAACCTGCAGTGCCAAAACC........................27200.05101000000000
..............T---CAATCGGT-TGTGGAGGGAGTCCAGC.......................................................................................................................................................................................................................................26200.05100100000000
droEug1
GCA---T---CCGAA---CTCTCTGGACATGATGG-TAG----------GAAATCGTTAAAT-----AGTTTGTCTGCTTCAAGGC---------------------------CCCTGGCTCCTACAGAGCCAATTT----------CCATT-------------------------------------------AACATCAACCCAC---------------CCGATACACTGCAGGGGTATTTCGTGCCCCT--AAAGGTAATCCCACCTGAGSizeHit CountTotal NormTotal
No Reads
droBia1
CAA---T---CTGAA---TTGCCTGC-AACC----------------------------------------------------------AAC---------------------TCAACATTTCATCCTTCATTAAGTACTTGCAGG-----------CCTTCT----GAT-AATTCTGATCCTATTCTGCCGGCACAAGTGGGTTTTA---------------CAGAATCACAATCTGCCGCACCAAAACCTCT--ATTAGTAGTTGTGCCAAAASizeHit CountTotal NormTotal
No Reads
droTak1
GATCAATTG----------------------------------------------------GGATCCGTATAATCCGTAGTAGA---CCCCC---------------------CTGTTGTTCCGCCCATTTCTAATAACTTGTC-A-----------CCTCCA----GGG-AATGTTGAGTCCGGTCTACCGGCACAAGTTGGCGCTG---------------CAGAAACTCAATCTGCAGTACCAA-ACCTCT--TTCAGTGGTTCAACCCAAASizeHit CountTotal NormTotal
No Reads
droEle1
AAC-ATT---TCGAT---CA--------------------------------------------------------------------CGACCAGTGATCCCTTTAAACACAAGTGTAAT----------TC-----TGATACC-G-----------CCACAA----TGA-AATATTGAGTCCGGACTACCAGCCCAAGTTGGTTCTG---------------CCTAAACTCAGTGTGGACTTCCAAAACTCGT--TTCTGTGGTTCGACTGAATSizeHit CountTotal NormTotal
No Reads
droRho1
GTA---T---CCGAA---CAATCCGT-AACAGAATGCATGCAACC---AGGGACTTCAAAGAATTCCGATTTGTCCGTAGTGGTTTCACAAT---------------------TAGTGGATCCACCTATCTCTCAGAATGTAGC-A-----------TCA----------------------------------TCAAGTTGGTTTTG---------------CAGAAACAATGTCTGTTCCACCAAAATCCCT--TTCGGTGGTTCCACTGAAGSizeHit CountTotal NormTotal
No Reads
droFic1
GATCATT---CCGAT---CAATCCTC-AGTGGAGAGCGTTCAGAC---CGGCACCCCTAGCTTATCCGATTCGTCCGCACTGGTCATACAAC---------------------CAGTGATTCCACCTGCCCCAAATTGTTTACC-G-----------CCAAAA----GGG-AACTTTGAGGCCGGTTTACCGGCTCAAGTTGGTGTTG---------------CAGAAATACAAACTGTAGTGCCAAAACCCCT--TTCAGTGGTTCCACTAAAGSizeHit CountTotal NormTotal
No Reads
droKik1
GTA---T---CCGAA---TACGTCGC-GGGTGAGACCGTGTCC-C---CGGTGTTGCC--CACTTCCGTTTTGTCCACTGGGG-GTCCCAAT---------------------TGTTGTCCTCTCAGAGCCCTAA----------------TCCAAGTCC-CTGC--CAG-GGTATCAGGCCCGGACTACCGGCCGAATGTGGTAT------------------GGTGGGTCAGTCTGCCGTGCCAAAACCCCT--TACGGCAATTCCACCAACASizeHit CountTotal NormTotal
No Reads
droAna3
GAGCTATGGTCCGAT---ATGTCCTC-TGTGGTAT---------------------------------------------------AGCTTC---------------------AAGTGATCCCAG----ACCTAATAATTCAAA-CTCCCGTAACAGTCACCGAAGAGGGTAATCAACAGTCCGGACT-CCGGTACGAATTGATGCCG---------------CAGTATTAGTTACGGTGGCACCAAAACCATCGAAACGGTGATCCCATTATCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................TCCTC-TGTGGTAT---------------------------------------------------AGCTTC---------------------AAGTG.............................................................................................................................................................2430.331100000
......TGGTCCGAT---ATGTCCTC-TGTGG...................................................................................................................................................................................................................................................2270.141010000
..........CCGAT---ATGTCCTC-TGTGGTT.................................................................................................................................................................................................................................................20150.071100000
........GTCCGAT---ATGTCCTC-TGTGG...................................................................................................................................................................................................................................................20200.051100000
droBip1
GAGCAATTGTCTGAGCAAATGTCCTC-TGTGGTA----TCCT--C---TGTGGTAATAAATGAAC-----------------------------------------------------------------CCCTG----------------TCAGAGTCACCTAAAAGGGTATTCCACAGTCCGGACCACCGGCACCGACTGATGCTG---------------CAGTTCTCGTACCTGCGACACCAAACCCCTT--ACAGGTGATTCCTCCATCASizeHit CountTotal NormTotal
No Reads
dp5
GTA---G---CCGAA---TTCATCGC-CTCGGAGAATGTGCAGCC---AAGTACGTCTGCAGCGTCCGTGGTGTCCGCAAG------TTCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------CCACCA----GTA-AATAGACGTTCCGGACCTCCG---GATATTGCCACCA---------------CAGGTACTAGACCTGTGGTGACTAAGCCACT--GGTGGGAGTCCCACCAAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................27850.0040003234315019540
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCC....................................................................................222033.606720567008009700
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................25826.882150190901031020
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCC...............................................................................................................................................23823.381870160200101500
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCG..............................................................................................................................................24818.63149013430603300
...........................................CC---AAGTACGTCTGCAGCGTCCGTGG............................................................................................................................................................................................................25116.001601500001000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................221015.70157014091301120
...........................................CC---AAGTACGTCTGCAGCGTCCGT..............................................................................................................................................................................................................232012.20244024400000000
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGACC.......................................................................................22209.5019006700000109140
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGAT............................................................................................................................................2689.0072053100513000
......................TCGC-CTCGGAGAATGTGCAGCC---AAG................................................................................................................................................................................................................................25208.10162095000006700
......................TCGC-CTCGGAGAATGTGCAGCC---A..................................................................................................................................................................................................................................23207.65153013820004900
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------C.....................................................................................................................2885.6345030120002100
......................TCGC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................20204.358708100000060
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATC.................................................................................................................................................21104.304303650002000
.........................................................................................................................................................................A-AATAGACGTTCCGGACCTCCG---................................................................................22203.807607600000000
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGACCTCCG---................................................................................26203.707400000006590
......................TCGC-CTCGGAGAATGTGCAGCC---AA.................................................................................................................................................................................................................................24202.855705700000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGACC.......................................24162.814503580001100
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................2682.381901900000000
.................................................................................................................TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................23201.953903800100000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATA---------------------......................................................................................................................2781.881501310000100
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................2881.751401210001000
.TA---G---CCGAA---TTCATCGC-CTCGGAGAATG.............................................................................................................................................................................................................................................27201.603203100001000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCG..............................................................................................................................................2381.501201000000110
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCC.........................................................................................................................................................24121.501801410201000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---G...............................................................................24201.402800200002240
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGAC........................................................................................21201.402800002002600
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................24121.251501110000300
...................TCATCGC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................23201.202401900000050
......G---CCGAA---TTCATCGC-CTCGGAGAATG.............................................................................................................................................................................................................................................25201.202402400000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGAC........................................23161.131801710000000
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................26121.081301120000000
.........................................................................................................................................................................A-AATAGACGTTCCGGACCTCCG---G...............................................................................23201.052102100000000
...................................................................................................................................................................................................................................TACTAGACCTGTGGTGACTAAGCCA.......................2511.0010000000100
......................................................................................................................................TC---------------------CCACCA----GTA-AATAGACGTTCCGGACC.......................................................................................28201.002002000000000
...........................................CC---AAGTACGTCTGCAGCGTCCGTGGTG..........................................................................................................................................................................................................2711.0010100000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTC..........................................................................................................................................................23120.92110810101000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................2480.8870700000000
.................................................................................................................TAGTTGTCCCGTCTATCCCGATC---------------------C.....................................................................................................................24200.851701610000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTAT..................................................................................................................................................20100.8080700001000
..............A---TTCATCGC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................25200.801600000001600
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------C.....................................................................................................................2780.7560420000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGACCTG.....................................24160.751201110000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCCGT......................................................................................................................................................23120.7590900000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................2680.7560600000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGAC........................................21160.751201200000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCCG..............................................................................................................................................2580.7560600000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................28110.7380800000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................21100.7070610000000
...................TCATCGC-CTCGGAGAATGTG...........................................................................................................................................................................................................................................20200.701401200002000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................23100.7070700000000
............................................................................................................................................................................................TCCG---GATATTGCCACCA---------------CAGGTAC.............................................24200.701401100000300
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCC........................................................................................................................................................25120.6780610100000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCC...............................................................................................................................................2480.6350410000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCCG.......................................................................................................................................................22130.6280800000000
.........................................................................................................................................................................A-AATAGACGTTCCGGACCTCCG---GA..............................................................................24200.601201200000000
......................TCGC-CTCGGAGAATGTGCAGCC---AAGT...............................................................................................................................................................................................................................26200.601201100000010
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGT...........................................................................................................................................................22120.5870700000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTG............................................................................................................................................................21120.5870700000000
.......................CGC-CTCGGAGAATGTGCAGCC---A..................................................................................................................................................................................................................................22200.551101100000000
.............................................................................CAAG------TTCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................24100.5050400001000
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................26100.5050401000000
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGG..........................................................................................19200.501001000000000
............................TCGGAGAATGTGCAGCC---AAGTACG............................................................................................................................................................................................................................24200.50100000000730
.................................................................................................................TAGTTGTCCCGTCTATCCCGAT............................................................................................................................................22200.501001000000000
........................................................................................................................................................................................................TGCCACCA---------------CAGGTACTAGAC........................................20160.5080800000000
.................................................................................................................TAGTTGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................25200.501001000000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................2980.5040310000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................25100.5050500000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGACCTGTGG..................................27100.5050410000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCC...............................................................................................................................................2280.5040400000000
........................................................................................................................................................................TA-AATAGACGTTCCGGAC........................................................................................18200.4590900000000
...................TCATCGC-CTCGGAGAATGTGCAGC.......................................................................................................................................................................................................................................24200.4590900000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---GATA............................................................................27200.4080080000000
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................22100.4040400000000
.............................................................................CAAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................23100.4040400000000
.............................................................................................................................................................CCACCA----GTA-AATAGACGTTCCGGAC........................................................................................25200.4080610000010
..........................................................................................AC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................20100.4040210000100
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................28100.4040400000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCC.........................................................................................................................................................20130.3850500000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCC........................................................................................................................................................21130.3850320000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGAA............................................................................................................................................2680.3830120000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGACCTG.....................................26160.3860400000200
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGAT............................................................................................................................................2580.3830200010000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---C...............................................................................24200.3570430000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---GATAT...........................................................................28200.3570010600000
..............................................................................................................................TATCCCGATC---------------------CCACCA----GTA-AATAGACGT...............................................................................................28150.3350410000000
...................................................TACGTCTGCAGCGTCCGTGG............................................................................................................................................................................................................2030.3310100000000
.........................................................TGCAGCGTCCGTGGTGTCA.......................................................................................................................................................................................................1930.3310100000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCCG.......................................................................................................................................................26120.3340310000000
....................................................ACGTCTGCAGCGTCCGTGGTGTC........................................................................................................................................................................................................2330.3310100000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------A.....................................................................................................................2890.3330210000000
..........................................................GCAGCGTCCGTGGTGTCCGCAAG------T...........................................................................................................................................................................................2430.3310100000000
...................................................TACGTCTGCAGCGTCCGTGGTG..........................................................................................................................................................................................................2230.3310100000000
..................................................GTACGTCTGCAGCGTCCGTGGTG..........................................................................................................................................................................................................2330.3310100000000
.......................................................................................................................................................................................................................................................AGCCACT--GGTGGGAGTCCCA......2030.3310100000000
.......................................................TCTGCAGCGTCCGTGGTGTC........................................................................................................................................................................................................2030.3310100000000
.......................................................TCTGCAGCGTCCGTGGTGTCCGT.....................................................................................................................................................................................................2330.3310100000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGACCT......................................25160.3150320000000
........................................................................................................................................................................................................TGCCACCA---------------CAGGTACTAGACCT......................................22160.3150500000000
........................................................................................................................................................................................................TGCCACCA---------------CAGGTACTAGACC.......................................21160.3150500000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................26100.3030200100000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---GAT.............................................................................26200.3060000501000
.TA---G---CCGAA---TTCATCGC-CTCGGAGAA...............................................................................................................................................................................................................................................25200.3060030000300
......................TCGC-CTCGGAGAATGTGCAGCC---...................................................................................................................................................................................................................................22200.3060000201030
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................23100.3030300000000
..............................................................................................................................................................CACCA----GTA-AATAGACGTTCCGGACC.......................................................................................25200.3060600000000
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTCTATC.................................................................................................................................................25100.3030210000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGACA.......................................24160.2540400000000
.................................................................................................................TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................21200.2550500000000
....................................................................TGGTGTCCGCAAG------TTCAC---------------------TAGTTG............................................................................................................................................................24120.2530300000000
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................21120.2530300000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---................................................................................23200.2550050000000
................................................................................G------TTCAC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................2780.2520110000000
..............................................................................AAG------TTCAC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................2980.2520200000000
............GAA---TTCATCGC-CTCGGAGAATGTGCA.........................................................................................................................................................................................................................................26200.2550000000320
................................................................................................................................TCCCGATC---------------------CCACCA----GTA-AATAGACGTTC.............................................................................................28200.2550400001000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTC.....................................................................................21200.2550001202000
................................................................................................................................TCCCGATC---------------------CCACCA----GTA-AATAGACGT...............................................................................................26200.2550410000000
.............................................................................CAAG------TTCAC---------------------TAGTTGTCCCGT......................................................................................................................................................21120.2530300000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATT---------------------......................................................................................................................2780.2520200000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGACCT......................................23160.2540400000000
........................................CAGCC---AAGTACGTCTGCAGCGTCC................................................................................................................................................................................................................24200.2550500000000
......G---CCGAA---TTCATCGC-CTCGG...................................................................................................................................................................................................................................................19200.2550500000000
..........................................................................................AC---------------------TAGTTGTCCCGTCTATCCCGA.............................................................................................................................................2380.2520200000000
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTC..........................................................................................................................................................21130.2330100200000
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................27100.2020100001000
......................TCGC-CTCGGAGAATGTGCAGA.......................................................................................................................................................................................................................................21200.2040400000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---A...............................................................................24200.2040000000400
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCG---GATAA...........................................................................28200.2040400000000
......................TCGC-CTCGGAGAATGTGA..........................................................................................................................................................................................................................................18200.2040400000000
.......................CGC-CTCGGAGAATGTGCAGCC---AAGTAC.............................................................................................................................................................................................................................27200.2040000000400
.......................................................................................................................TCCCGTCTATCCCGATC---------------------CCACC.................................................................................................................22200.2040400000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................19100.2020200000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCTCCA---................................................................................23200.2040000000400
................................................................................................................................................................CCA----GTA-AATAGACGTTCCGGACCTCCG---................................................................................27200.2040000000400
................................................................................G------TTCAC---------------------TAGTTGTCCCGTCTATC.................................................................................................................................................23100.2020200000000
............................TCGGAGAATGTGCAGCC---AAGTACGT...........................................................................................................................................................................................................................25200.2040400000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCA...............................................................................................................................................23100.2020110000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATC.................................................................................................................................................20100.2020200000000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCA......................................................................................20200.2040400000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATAAA...............................................................................................................................................23100.2020200000000
..A---G---CCGAA---TTCATCGC-CTCGGA..................................................................................................................................................................................................................................................21200.2040400000000
.........................................................................................................................................................................A-AATAGACGTTCCGGACCTCCG---A...............................................................................23200.2040400000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTA...................................................................................................................................................20100.2020200000000
........................GC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................18200.2040400000000
..................................................................................................................AGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................22200.2040400000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATC.................................................................................................................................................22100.2020110000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATA.................................................................................................................................................21100.2020200000000
..............................................................................................................................TATCCCGATC---------------------CCACCA----GTA-AATAGACG................................................................................................27160.1930100000200
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCCGT......................................................................................................................................................27110.1820200000000
...............................................................................................................................................................................................................................CAGGTACTAGACCTGTGGTGACTA............................24120.1720200000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCA........................................................................................................................................................25120.1720200000000
...............................................................................AG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................20120.1720200000000
........................................................................GTCCGCAAG------TTCAC---------------------TAGTTGTCCC........................................................................................................................................................24120.1720200000000
............................................................................GCAAG------TTCAC---------------------TAGTTGTCCCGTC.....................................................................................................................................................23120.1720200000000
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTCCCGT......................................................................................................................................................25120.1720200000000
........................................................................GTCCGCAAG------TTCAC---------------------TAGTTGT...........................................................................................................................................................21120.1720200000000
...........................................................................CGCAAG------TTCAC---------------------TAGTTGTC..........................................................................................................................................................19130.1520200000000
.........................................................................TCCGCAAG------TTCAC---------------------TAGTTGTCCCG.......................................................................................................................................................24130.1520100001000
...........................................CC---AAGTACGTCTGCAGCGTCCA...............................................................................................................................................................................................................22200.1530300000000
........................GC-CTCGGAGAATGTGCAGCC---AA.................................................................................................................................................................................................................................22200.1530300000000
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGACCT......................................................................................23200.1530000000030
.....................................................................................................................TGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................21200.1530300000000
............GAA---TTCATCGC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................27200.1530100000020
........................................................................................................................................................................TA-AATAGACGTTCCGGACC.......................................................................................19200.1530000000030
.............................................................................................................................................................CCACCA----GTA-AATAGACGTTCCGGA.........................................................................................24200.1530300000000
..............A---TTCATCGC-CTCGGAGAATGTGC..........................................................................................................................................................................................................................................23200.1530000000300
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGA.........................................................................................20200.1530000000300
...................................................................................................................GTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................21200.1530300000000
...........................................................................................C---------------------TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................24200.1530200000010
.....................ATCGC-CTCGGAGAATGTGCAGC.......................................................................................................................................................................................................................................22200.1530300000000
...........................................CC---AAGTACGTCTGCAGCGTC.................................................................................................................................................................................................................20200.1530020010000
........................................................................................................................................................................TA-AATAGACGTTCCGGACCT......................................................................................20200.1530000300000
....................CATCGC-CTCGGAGAATGTGCAGCC---...................................................................................................................................................................................................................................24200.1530300000000
................................................................................................................................................................CCA----GTA-AATAGACGTTCCGG..........................................................................................20200.1530300000000
..A---G---CCGAA---TTCATCGC-CTCGGAGAA...............................................................................................................................................................................................................................................24200.1530300000000
...................................................................................................................................................................................................................................TACTAGACCTGTGGTGACTAA...........................21140.1420100000100
.................................................................................................................................................................................................................................GGTACTAGACCTGTGGTGAC..............................20150.1320200000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGATT---------------------......................................................................................................................2680.1310100000000
......................................................................................................................................................................................................ATTGCCACCA---------------CAGGTACTAGAC........................................22160.1320200000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCC..............................................................................................................................................2480.1310010000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATG---------------------......................................................................................................................2780.1310000100000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------C.....................................................................................................................2980.1310100000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGT.............................................................................................................................................2580.1310100000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGATA---------------------......................................................................................................................2680.1310100000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGACC.......................................22160.1320110000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGC.............................................................................................................................................2580.1310100000000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGAA........................................23160.1320200000000
........................................................................................................................................................................................................TGCCACCA---------------CAGGTACTAGACA.......................................21160.1320200000000
.........................................................................................CAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................2880.1310100000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCCGAT............................................................................................................................................2780.1310010000000
..........................................................................................AC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................2780.1310100000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------T.....................................................................................................................2880.1310100000000
..........................................................................................AC---------------------TAGTTGTCCCGTCTATCCCGATC---------------------......................................................................................................................2580.1310100000000
......................................................................................................................................................................................................ATTGCCACCA---------------CAGGTACTAGACC.......................................23160.1320200000000
.......................................................................................................................................................................................................TTGCCACCA---------------CAGGTACTAGACCA......................................23170.1220100000100
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGTACTAGACCA......................................25170.1220200000000
.......................................................................TGTCCGCAAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................2990.1110100000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGAAA---------------------A.....................................................................................................................2890.1110100000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCCCGATA---------------------A.....................................................................................................................2890.1110100000000
........................................................................................................................................................................TA-AATAGACGTTCCGGA.........................................................................................17200.1020000000200
.............................................................................CAAG------TTCAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................27100.1010100000000
................................AGAATGTGCAGCC---AAGTACGTCTG........................................................................................................................................................................................................................24200.1020200000000
........................................................................................................................................................................................................TGCCACCA---------------CAGGTACTAGACCTGTG...................................25100.1010100000000
...............................................................................AG------TTCAC---------------------TAGTTGTCCCGTCTATCC................................................................................................................................................25100.1010001000000
....................................................................................................................TTGTCCCGTCTATCCCGATC---------------------CC....................................................................................................................22200.1020200000000
................................................................................................................................TCCCGATC---------------------CCACCA----GTA-AATAGACG................................................................................................25200.1020200000000
......................................................................................................................GTCCCGTCTATCCCGATC---------------------CCAC..................................................................................................................22200.1020200000000
....................CATCGC-CTCGGAGAATGTGCAG........................................................................................................................................................................................................................................22200.1020200000000
......................................................................................................................................TC---------------------CCACCA----GTA-AATAGACGTTCCG...........................................................................................24200.1020200000000
.................................................................................................................................................................CA----GTA-AATAGACGTTCCGGACCTCA....................................................................................25200.1020000000200
......................TCGC-CTCGGAGAATGTGCAGCT---...................................................................................................................................................................................................................................22200.1020200000000
......................................................................................................................GTCCCGTCTATCCCGATC---------------------CC....................................................................................................................20200.1020200000000
........................................................................................TCAC---------------------TAGTTGTCCCGTCTATCAA...............................................................................................................................................23100.1010010000000
.......................................................................................................................TCCCGTCTATCCCGATC---------------------CCACCA----............................................................................................................23200.1020200000000
.........................................................................................................................................................................A-AATAGACGTTCCGGACCTCC....................................................................................21200.1020000000200
..................................................................................................................................CCGATC---------------------CCACCA----GTA-AATAGACGTTC.............................................................................................26200.1020200000000
GTA---G---CCGAA---TTCATCGC-CTCGGAG.................................................................................................................................................................................................................................................24200.1020000000200
................................................................................................................................................................CCA----GTA-AATAGACGTTCCGGACC.......................................................................................23200.1020200000000
..............................................................................................................................................................................AGACGTTCCGGACCTCCG---GAT.............................................................................21200.1020200000000
..........................................................................CCGCAAG------TTCAC---------------------TAGTTGTCCCGTCT....................................................................................................................................................26100.1010100000000
..A---G---CCGAA---TTCATCGC-CTCGGAG.................................................................................................................................................................................................................................................22200.1020200000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTATCCA...............................................................................................................................................24100.1010100000000
.......................................................................................TTCAC---------------------TAGTTGTCCCGTCTAT..................................................................................................................................................21100.1010100000000
droPer2
GCA--GT---CCAGT---ACATCTGC-AGCGTCTA-T--------------------------GTCCGTGGTGTCCGCAAG------TTCGC---------------------TTGTTGTCCCGTCTTTCCGAATC---------------------CCACCA----GTG-ATAAGAAGTTCCGGACCTCCG---GATATTGCCACCA---------------CAGGAACTAGGCCTGTGGCGCCTAAGCCGCT--GGTGGGAGTCCCACCAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................TCCG---GATATTGCCACCA---------------CAGGAAC.............................................2450.201010000
.....................................................................................................................................................................................................TATTGCCACCA---------------CAGGAACTAGGCCTAA....................................2760.171010000
.......................................................................................................................................................................................GGACCTCCG---GATATTGCCAC.....................................................................20200.102000002
droWil2
CTGT-----------------------------------------------------------------------------------------------------------------AGTGCCACTTGTTGCAACTGACTCTAC-----------------------------------------------A---ATTAATGCGGTAG---------------CTGATGCAATACCTGGAATGCCGAGACCATT--GGTGGGTTTGTCTCCTAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................AG---------------CTGATGCAATACCTGGAATGCC..............................2440.25101000
....................................................................................................................................................................................................TTAATGCGGTAG---------------CTGATGCAATACC.......................................25200.05101000
droVir3
ATTT-AT---CCGTG---TCGTCCGC-TGTCATAGAAGT-TA--CGAAA----GGGCGATGGCAACAATTAAATT--------------------------------------------------------------TACAACA-G-----------CCCCTA----GAA-GGCTTGTCGTCCGGACTACCGGCTGCTTTAGGTACCACAGCTAATAGTGTTCCCACTGCCCTACCTGTGGCGCCTACACCTGT--AGTGGGTGTT---------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCCTAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/15/2015 at 03:02 PM