ID:

dse_3

 Coordinate:

scaffold_0:12715232-12715298 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.4 -33.2 -32.9

Flybase annnotation

utr3 [utr3_minus_7593]; Antisense to utr3 [utr3_plus_5874]

No Repeatable elements found

Sense Strand Reads

ATGTTTAAACTAGATGTACAGTGTGCCGTCTACTTACCAAGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGCAAAAGAATACACCGTGCTCAGTGCTTCGATT

***********************************..(((.((((((((..((((((((...((.(((((((....(((((....)).)))..))))))).))...))))))))..))))))..)).))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V115

head

 M054

female body

 V113

male body		 V114

embryo
..................................................CTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 0 1 187152.00 187152 107614 45454 18643 15441
..................................................CTAAGTACTAGTGCCGCAGGA................................................................................................ 21 0 1 37258.00 37258 20842 13456 2018 942
..................................................CTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 0 1 16434.00 16434 10454 4483 1085 412
...................................................TAAGTACTAGTGCCGCAGGAG............................................................................................... 21 0 1 6044.00 6044 2313 3157 288 286
..................................................CTAAGTACTAGTGCCGCAGG................................................................................................. 20 0 1 4691.00 4691 2450 1994 195 52
..................................................CTAAGTACTAGTGCCGCAGGAGTT............................................................................................. 24 0 1 2119.00 2119 1593 272 214 40
...................................................TAAGTACTAGTGCCGCAGGAGT.............................................................................................. 22 0 1 1552.00 1552 840 577 80 55
...................................................TAAGTACTAGTGCCGCAGGA................................................................................................ 20 0 1 1148.00 1148 239 870 25 14
..................................................CTAAGTACTAGTGCCGCAGGAGA.............................................................................................. 23 1 1 1063.00 1063 595 413 39 16
..................................................CTAAGTACTAGTGCCGCAGGAA............................................................................................... 22 1 1 1019.00 1019 633 344 36 6
..................................................CTAAGTACTAGTGCCGCAGGAGTTT............................................................................................ 25 1 1 771.00 771 617 70 80 4
..................................................CTAAGTACTAGTGCCGCAGGAT............................................................................................... 22 1 1 589.00 589 174 396 13 6
..................................................CTAAGTACTAGTGCCGCAGGGG............................................................................................... 22 1 1 498.00 498 137 310 25 26
..................................................CTAAGTACTAGTGCCGCAGGT................................................................................................ 21 1 1 485.00 485 270 199 15 1
..................................................CTAAGTACTAGTGCCGCATGAG............................................................................................... 22 1 1 468.00 468 217 139 104 8
..................................................CTAAGTACTAGTTCCGCAGGAG............................................................................................... 22 1 1 426.00 426 183 181 47 15
..................................................CTAAGTACTAGTGCCGCACGAG............................................................................................... 22 1 1 357.00 357 155 26 164 12
..................................................CTAAGTACTAGTGCCTCAGGAG............................................................................................... 22 1 1 346.00 346 213 107 18 8
..................................................CTAAGTACTAGTGCCGCAAGAG............................................................................................... 22 1 1 342.00 342 161 10 165 6
..................................................CTAAGTACTAGCGCCGCAGGAG............................................................................................... 22 1 1 336.00 336 166 89 59 22
..................................................CTAAGTCCTAGTGCCGCAGGAG............................................................................................... 22 1 1 331.00 331 39 280 6 6
..................................................CTAAGTACTAGTGCTGCAGGAG............................................................................................... 22 1 1 330.00 330 139 77 21 93
..................................................CTAAGTACTAGTGCCGCAGGAGC.............................................................................................. 23 1 1 323.00 323 217 59 25 22
..................................................CTAAGTACTACTGCCGCAGGAG............................................................................................... 22 1 1 314.00 314 163 103 27 21
..................................................CTAAGTACTAGTGCCGCAGGCG............................................................................................... 22 1 1 313.00 313 234 1 46 32
..............................................................................................TCCTGCTGCCCAAGTGCTTATT................................................... 22 0 1 269.00 269 130 126 8 5
..................................................CTAAGTACTAGTGCCGCAG.................................................................................................. 19 0 1 268.00 268 132 129 5 2
..................................................CTAAGTACTAGTGCCGCAGCAG............................................................................................... 22 1 1 259.00 259 135 80 32 12
..................................................CTAAGTAATAGTGCCGCAGGAG............................................................................................... 22 1 1 255.00 255 185 65 3 2
..................................................CTAAGTACTAGTCCCGCAGGAG............................................................................................... 22 1 1 250.00 250 122 67 26 35
..................................................CTACGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 241.00 241 36 193 6 6
..................................................CTAAGCACTAGTGCCGCAGGAG............................................................................................... 22 1 1 227.00 227 114 66 32 15
..................................................CTAAGTACTATTGCCGCAGGAG............................................................................................... 22 1 1 214.00 214 129 50 21 14
...................................................TAAGTACTAGTGCCGCAGGAGTT............................................................................................. 23 0 1 210.00 210 144 40 14 12
..................................................CTAAGTACTAGTGCCGCAGTAG............................................................................................... 22 1 1 208.00 208 101 94 7 6
..................................................CTAAGAACTAGTGCCGCAGGAG............................................................................................... 22 1 1 200.00 200 118 63 16 3
..................................................CTAAGTACTAGGGCCGCAGGAG............................................................................................... 22 1 1 186.00 186 43 114 22 7
..................................................CTAAGTACTAGTGCCGCCGGAG............................................................................................... 22 1 1 182.00 182 58 107 7 10
....................................................AAGTACTAGTGCCGCAGGAG............................................................................................... 20 0 1 173.00 173 15 157 1 0
..................................................CTAAGTACTAGTGCCACAGGAG............................................................................................... 22 1 1 171.00 171 105 39 10 17
..................................................TTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 162.00 162 32 93 8 29
..................................................CTAAGTACTAGTGCCCCAGGAG............................................................................................... 22 1 1 156.00 156 100 14 18 24
..................................................CTAAGTACTAGTGCCGCAGAAG............................................................................................... 22 1 1 154.00 154 121 25 6 2
..................................................CTAAGTACTAGTGTCGCAGGAG............................................................................................... 22 1 1 153.00 153 48 40 7 58
..................................................CTAAGTACTAGTGCCGCAGGAC............................................................................................... 22 1 1 150.00 150 71 56 17 6
..................................................CTAAGTACTAGTGCCGCAGGG................................................................................................ 21 1 1 147.00 147 24 120 2 1
..............................................................................................TCCTGCTGCCCAAGTGCTTAT.................................................... 21 0 1 142.00 142 119 15 7 1
...................................................TAAGTACTAGTGCCGCAGG................................................................................................. 19 0 1 140.00 140 17 121 1 1
..................................................ATAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 136.00 136 131 3 1 1
..................................................CTAAGTACTGGTGCCGCAGGAG............................................................................................... 22 1 1 136.00 136 82 21 20 13
..................................................CTAAGTACCAGTGCCGCAGGAG............................................................................................... 22 1 1 131.00 131 97 11 13 10
..................................................CTAAGTACTAGTGCCGCGGGAG............................................................................................... 22 1 1 131.00 131 83 15 19 14
...............................................................................................CCTGCTGCCCAAGTGCTTATT................................................... 21 0 1 124.00 124 72 35 4 13
..................................................CCAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 120.00 120 76 23 10 11
..................................................CTAAGTACTAGTGCCGTAGGAG............................................................................................... 22 1 1 118.00 118 50 13 9 46
..................................................CAAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 118.00 118 106 11 0 1
..................................................CTAAGTACTAGTACCGCAGGAG............................................................................................... 22 1 1 116.00 116 63 36 10 7
..................................................CTAGGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 114.00 114 61 17 17 19
..................................................CTAAGTACTAATGCCGCAGGAG............................................................................................... 22 1 1 113.00 113 72 24 9 8
..................................................CTGAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 109.00 109 41 51 9 8
..................................................CTAAGTCCTAGTGCCGCAGGA................................................................................................ 21 1 1 107.00 107 10 96 1 0
..................................................CTAACTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 107.00 107 42 53 7 5
..................................................CTAAGTATTAGTGCCGCAGGAG............................................................................................... 22 1 1 103.00 103 46 11 8 38
..................................................CTAAGTACAAGTGCCGCAGGAG............................................................................................... 22 1 1 102.00 102 81 11 3 7
..................................................CTAAGTACTAGTGCCGCA................................................................................................... 18 0 1 102.00 102 86 11 1 4
..................................................CGAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 101.00 101 4 96 1 0
..................................................CTAAGTACTAGTGCCTCAGGA................................................................................................ 21 1 1 99.00 99 46 43 9 1
..............................................................................................TCCTGCTGCCCAAGTGCTT...................................................... 19 0 1 98.00 98 92 0 5 1
..................................................CTAAGTACTAGTGCAGCAGGAG............................................................................................... 22 1 1 93.00 93 78 0 5 10
..................................................CTAAGTACTAGTGCCGCAGT................................................................................................. 20 1 1 92.00 92 53 33 5 1
..................................................CTAAGTGCTAGTGCCGCAGGAG............................................................................................... 22 1 1 91.00 91 50 14 11 16
...............................................................................................CCTGCTGCCCAAGTGCTTATTA.................................................. 22 0 1 91.00 91 52 14 5 20
..................................................CTAAGGACTAGTGCCGCAGGAG............................................................................................... 22 1 1 91.00 91 4 66 17 4
..................................................CTAAGTACTAGTGCCGCCGGA................................................................................................ 21 1 1 91.00 91 41 43 5 2
..................................................CTAAGTACTAGAGCCGCAGGAG............................................................................................... 22 1 1 89.00 89 31 48 5 5
..................................................CTCAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 88.00 88 50 1 28 9
.................................................CCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 0 1 87.00 87 22 58 2 5
..................................................CTAAGTACTAGTTCCGCAGGA................................................................................................ 21 1 1 87.00 87 39 42 5 1
...................................................TAAGTACTAGTGCCGCAGGAGTTT............................................................................................ 24 1 1 80.00 80 61 13 4 2
..................................................CTACGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 80.00 80 13 64 2 1
..................................................CTAAGTACTAGTGCCGCATGA................................................................................................ 21 1 1 77.00 77 21 46 10 0
..................................................CTAAGTACTACTGCCGCAGGA................................................................................................ 21 1 1 77.00 77 43 31 2 1
..................................................CTAAGTACTAGTGCCGCAGGATT.............................................................................................. 23 1 1 76.00 76 19 55 2 0
..................................................CTAAGTACTAGTGCCGCAGGAAA.............................................................................................. 23 2 1 74.00 74 48 23 3 0
..................................................CTAAGTACTAGTGCCGCAGGAGG.............................................................................................. 23 1 1 72.00 72 13 53 3 3
..................................................CTAAGTACTAGTGACGCAGGAG............................................................................................... 22 1 1 71.00 71 57 6 4 4
..................................................CTAAGTACTAGGGCCGCAGGA................................................................................................ 21 1 1 70.00 70 11 50 8 1
..................................................CTAAGTACTAGTGCCGAAGGAG............................................................................................... 22 1 1 67.00 67 50 2 6 9
..................................................CTAAGAACTAGTGCCGCAGGA................................................................................................ 21 1 1 67.00 67 39 27 1 0
..................................................CTAAGTACTAGCGCCGCAGGA................................................................................................ 21 1 1 64.00 64 30 29 4 1
..................................................CTAATTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 64.00 64 45 11 5 3
..................................................CTAAGTACTAGTGCCGCAGAG................................................................................................ 21 2 1 63.00 63 26 32 2 3
..................................................CTAAGTACTAGTGCCGCAGGAGAA............................................................................................. 24 2 1 60.00 60 52 6 2 0
..................................................CTAAGTACTATTGCCGCAGGA................................................................................................ 21 1 1 59.00 59 39 18 1 1
...................................................TAAGTACTAGTGCCGCAGGAT............................................................................................... 21 1 1 57.00 57 2 54 1 0
..............................................................................................TCCTGCTGCCCAAGTGCTTA..................................................... 20 0 1 57.00 57 55 1 0 1
..................................................CTAAGTACTAGTGCTGCAGGA................................................................................................ 21 1 1 54.00 54 19 21 0 14
..................................................CTAAGCACTAGTGCCGCAGGA................................................................................................ 21 1 1 52.00 52 23 24 4 1
..................................................CTAAGTAATAGTGCCGCAGGA................................................................................................ 21 1 1 52.00 52 34 18 0 0
..............................................................................................TCCTGCTGCCCAAGTGCTTATTA.................................................. 23 0 1 52.00 52 26 18 1 7
..................................................CTAAGTACTAGTGCCGCAGGAGTAA............................................................................................ 25 1 1 52.00 52 44 4 4 0
..................................................CTAAGTACTAGTTCCGCAGGAGT.............................................................................................. 23 1 1 52.00 52 27 24 1 0
..................................................CTAAGTACTAGTGCCGCAGGTT............................................................................................... 22 2 1 51.00 51 17 33 1 0
..................................................CTAAATACTAGTGCCGCAGGAG............................................................................................... 22 1 1 51.00 51 38 3 7 3
..................................................CTAAGTACTAGTGCCGCAGGAGTAT............................................................................................ 25 2 1 50.00 50 43 1 6 0
..................................................CTAAGTACTAGTGCCGCAGTA................................................................................................ 21 1 1 49.00 49 24 24 0 1
..................................................CTAAGTTCTAGTGCCGCAGGAG............................................................................................... 22 1 1 48.00 48 21 8 4 15
........................................................................TTAGGTTCGTGTCCGCAATACCT........................................................................ 23 0 1 47.00 47 7 10 13 17
..................................................CTAAGTACTAGTGCCGCAAGA................................................................................................ 21 1 1 46.00 46 18 2 26 0
..................................................CTAAGTACTAGTGCCGCAGGAGTTA............................................................................................ 25 0 1 45.00 45 38 3 3 1
.................................................GCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 44.00 44 0 44 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGTA............................................................................................. 24 1 1 44.00 44 23 18 3 0
..................................................CTAAGTACTAGTGCCGCACGA................................................................................................ 21 1 1 43.00 43 11 8 24 0
..................................................TTAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 42.00 42 7 33 0 2
..................................................CTAAGTACTAGTGCCGCATGAGT.............................................................................................. 23 1 1 42.00 42 21 16 4 1
..................................................CTAAGTACTAGTGCCGCAGGC................................................................................................ 21 1 1 41.00 41 32 2 2 5
..................................................CTAAGTCCTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 41.00 41 4 33 3 1
..................................................CTAAGTACTAGTGCCGCAGGAGTTTT........................................................................................... 26 2 1 40.00 40 34 4 2 0
..................................................CTAAGTACTCGTGCCGCAGGAG............................................................................................... 22 1 1 39.00 39 27 1 3 8
..................................................CTAAGTACTAGTCCCGCAGGA................................................................................................ 21 1 1 39.00 39 18 16 1 4
..................................................CTAAGTACTAGTGCCGCTGGAG............................................................................................... 22 1 1 38.00 38 17 3 3 15
..................................................CTAAGTACTAGTGCCACAGGA................................................................................................ 21 1 1 37.00 37 22 14 0 1
..................................................CTACGTACTAGTGCCGCCGGAG............................................................................................... 22 2 1 37.00 37 0 36 0 1
..................................................CTAAGTACTTGTGCCGCAGGAG............................................................................................... 22 1 1 37.00 37 15 11 3 8
...................................................TAAGTACTAGTGCCGCAGGAGA.............................................................................................. 22 1 1 35.00 35 4 31 0 0
..................................................CCAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 35.00 35 16 19 0 0
........................................................................TTAGGTTCGTGTCCGCAATACC......................................................................... 22 0 1 34.00 34 14 8 10 2
..................................................CTAAGTACTAGAGCCGCAGGA................................................................................................ 21 1 1 32.00 32 13 18 1 0
..................................................CTAAGTACTAGTGCCGCAGGAGAT............................................................................................. 24 1 1 32.00 32 22 5 4 1
..................................................CTAAGTACTAGTGCCGCAGAA................................................................................................ 21 1 1 31.00 31 21 10 0 0
..................................................CTAAGTACTAGTGCCCCAGGA................................................................................................ 21 1 1 31.00 31 23 4 2 2
..................................................CTAAGTACTACTGCCGCAGGAGT.............................................................................................. 23 1 1 31.00 31 20 8 2 1
..................................................CTAAGTACTAGTGTCGCAGGA................................................................................................ 21 1 1 30.00 30 10 13 2 5
..................................................CTAACTACTAGTGCCGCAGGA................................................................................................ 21 1 1 30.00 30 7 19 4 0
....................................................AAGTACTAGTGCCGCAGGAGT.............................................................................................. 21 0 1 29.00 29 3 26 0 0
..................................................CTAAGTACTAGTGCCTCAGGAGT.............................................................................................. 23 1 1 29.00 29 17 11 0 1
........................................................................TTAGGTTCGTGTCCGCAATAC.......................................................................... 21 0 1 29.00 29 12 6 11 0
...............................................................................................CCTGCTGCCCAAGTGCTTAT.................................................... 20 0 1 29.00 29 21 6 0 2
..................................................CTAAGTACCAGTGCCGCAGGA................................................................................................ 21 1 1 28.00 28 19 5 2 2
..................................................CTAAGTACTAGTGCCGCGGGA................................................................................................ 21 1 1 28.00 28 20 2 1 5
..................................................CTAAGTACTAGTGCCGTAGGA................................................................................................ 21 1 1 28.00 28 15 2 1 10
..................................................CTAAGGACTAGTGCCGCAGGA................................................................................................ 21 1 1 27.00 27 3 22 2 0
.................................................TCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 27.00 27 0 27 0 0
..................................................CTAAGTACTAGTGCCGCAGGGGT.............................................................................................. 23 1 1 27.00 27 4 23 0 0
..................................................CTACGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 27.00 27 6 21 0 0
................................................................................................CTGCTGCCCAAGTGCTTATT................................................... 20 0 1 27.00 27 17 7 1 2
..................................................GTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 27.00 27 22 4 0 1
..................................................CGAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 26.00 26 2 24 0 0
....................................................AAGTACTAGTGCCGCAGGA................................................................................................ 19 0 1 26.00 26 3 23 0 0
...................................................TAAGTACTAGTGCCGCAGGAA............................................................................................... 21 1 1 25.00 25 6 19 0 0
..................................................CTAAGTACTAGCGCCGCAGGAGT.............................................................................................. 23 1 1 25.00 25 17 5 3 0
..................................................CTAAGAACTAGTGCCGCAGGAA............................................................................................... 22 2 1 25.00 25 25 0 0 0
.....................................................AGTACTAGTGCCGCAGGAG............................................................................................... 19 0 1 25.00 25 4 19 0 2
..................................................CTAAGTACTGGTGCCGCAGGA................................................................................................ 21 1 1 25.00 25 13 8 3 1
..................................................CTAAGAACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 24.00 24 18 5 1 0
..................................................CTAAGTACTAATGCCGCAGGA................................................................................................ 21 1 1 24.00 24 18 5 1 0
..................................................CTAGGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 24.00 24 12 9 1 2
..................................................CTAAGTACTAGTGCCGCAGGAAT.............................................................................................. 23 1 1 24.00 24 13 9 2 0
..................................................CTAAGTAATAGTGCCGCAGGAGT.............................................................................................. 23 1 1 23.00 23 14 9 0 0
..................................................CTGAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 23.00 23 8 15 0 0
..................................................CTAAGTACTATTGCCGCAGGAGT.............................................................................................. 23 1 1 22.00 22 15 5 1 1
..................................................CTAAGTACTAGTGCCGCAGA................................................................................................. 20 1 1 22.00 22 10 12 0 0
................................................................................................CTGCTGCCCAAGTGCTTATTA.................................................. 21 0 1 22.00 22 12 7 0 3
..................................................CTAAGTATTAGTGCCGCAGGA................................................................................................ 21 1 1 22.00 22 13 5 1 3
..................................................CTAAGTACTAGTGCCGCAGGTG............................................................................................... 22 1 1 22.00 22 17 0 3 2
..................................................CTAAGTACTAGTCCCGCAGGAGT.............................................................................................. 23 1 1 21.00 21 10 7 1 3
..................................................CTAAGTACTAGTGCCGCAGTT................................................................................................ 21 2 1 21.00 21 6 14 0 1
..................................................CTTAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 21.00 21 13 4 1 3
..................................................CTAAGTACTAGTGCCGCAGCA................................................................................................ 21 1 1 20.00 20 16 3 1 0
...................................................TAAGCACTAGTGCCGCAGGAG............................................................................................... 21 1 1 20.00 20 2 18 0 0
...................................................CTAGTACTAGTGCCGCAGGAG............................................................................................... 21 2 1 19.00 19 5 1 0 13
...................................................TAAGTACTAGTGCCTCAGGAG............................................................................................... 21 1 1 19.00 19 1 18 0 0
..................................................CTAATTACTAGTGCCGCAGGA................................................................................................ 21 1 1 19.00 19 15 3 1 0
..................................................CTAAGTACAAGTGCCGCAGGA................................................................................................ 21 1 1 19.00 19 12 6 1 0
..................................................CTAAGTACTAGTGCCGGAGGAG............................................................................................... 22 1 1 19.00 19 13 4 0 2
...................................................TAAGTACTAGTGCCGCAGGAGC.............................................................................................. 22 1 1 19.00 19 12 5 2 0
..................................................CTAAGTACTAGTGCCGCAAGAGT.............................................................................................. 23 1 1 19.00 19 16 0 3 0
..................................................CTAAGTACTAGTGCTGCAGGAGT.............................................................................................. 23 1 1 19.00 19 11 5 0 3
.................................................ACTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 19.00 19 1 18 0 0
..................................................CTAAGTACTAGTGGCGCAGGAG............................................................................................... 22 1 1 18.00 18 10 4 2 2
...................................................TAAGTACTCGTGCCGCAGGAG............................................................................................... 21 1 1 18.00 18 1 17 0 0
..................................................CTAAGTACTAGTTCCGCAGG................................................................................................. 20 1 1 18.00 18 13 5 0 0
..................................................CTAAGTACTAGTACCGCAGGA................................................................................................ 21 1 1 17.00 17 13 3 0 1
..................................................CTATGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 17.00 17 10 0 0 7
..................................................ATAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 17.00 17 15 2 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGAAA............................................................................................ 25 2 1 17.00 17 14 3 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGCT............................................................................................. 24 1 1 17.00 17 13 1 2 1
...................................................TAAGTACTAGTGCCGCAGGT................................................................................................ 20 1 1 17.00 17 3 14 0 0
..................................................CTACGTACTAGTGCCGCCGGA................................................................................................ 21 2 1 17.00 17 1 16 0 0
......................................................GTACTAGTGCCGCAGGAG............................................................................................... 18 0 1 16.00 16 2 13 0 1
...................................................TAAGTACTAGTTCCGCAGGAG............................................................................................... 21 1 1 16.00 16 4 11 1 0
..................................................CTAAGTACTAGTGCCGCAGCAGT.............................................................................................. 23 1 1 16.00 16 7 8 0 1
..................................................CTAAGTACTAGTGCCGCACGAGT.............................................................................................. 23 1 1 16.00 16 9 1 6 0
..................................................CAAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 16.00 16 12 4 0 0
..................................................CTAAGTACTAGTGCGGCAGGAG............................................................................................... 22 1 1 16.00 16 9 4 2 1
..................................................CTAAGTACTAGTGCCGCGAG................................................................................................. 20 2 1 16.00 16 9 4 1 2
..................................................CTAAGAACTAGTGCCGCAGGAC............................................................................................... 22 2 1 16.00 16 15 1 0 0
...................................................TAAGTACTAGTGCCGCAGTAG............................................................................................... 21 1 1 16.00 16 7 7 2 0
..................................................CTAAGTACTAGTGCCGCAGTAGT.............................................................................................. 23 1 1 16.00 16 6 9 1 0
..................................................CTCAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 15.00 15 13 1 1 0
...................................................TAAGTAATAGTGCCGCAGGAG............................................................................................... 21 1 1 15.00 15 4 11 0 0
..................................................CTAAGTACTAGTGCCGCAGAAGT.............................................................................................. 23 1 1 15.00 15 13 2 0 0
..................................................CTAAGTACTAGGGCCGCAGGAGT.............................................................................................. 23 1 1 15.00 15 4 7 3 1
..................................................CTAAGTACTAGTGCCGCAGGATTT............................................................................................. 24 1 1 14.00 14 10 4 0 0
..................................................CTAGGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 14.00 14 10 2 2 0
..................................................CTAAGCACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 14.00 14 8 4 0 2
..................................................CTAAGGACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 14.00 14 1 12 1 0
.................................................GCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 1 1 14.00 14 0 14 0 0
..................................................CTACGTACTAGTGCCGCAGG................................................................................................. 20 1 1 13.00 13 1 12 0 0
..................................................CTAAGTACTAGTGCCGCAAG................................................................................................. 20 1 1 13.00 13 5 7 1 0
...................................................TAAGTACTACTGCCGCAGGAG............................................................................................... 21 1 1 13.00 13 2 10 1 0
..................................................CTAAGTCCTAGTGCCGCAGG................................................................................................. 20 1 1 13.00 13 1 12 0 0
..................................................CTAAGTACAAGTGCCGCAGGAGT.............................................................................................. 23 1 1 13.00 13 12 1 0 0
..................................................CTAAGTACTAGTGTCGCAGGAGT.............................................................................................. 23 1 1 13.00 13 6 6 0 1
.................................................CCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 0 1 13.00 13 3 10 0 0
..................................................CTAAGTACTAGTGCAGGAG.................................................................................................. 19 2 1 13.00 13 11 0 0 2
..................................................CTAAGTACTAGTGCCACAGGAGT.............................................................................................. 23 1 1 13.00 13 9 2 0 2
..................................................CTAAGTACTAGTGCCGCAGTTT............................................................................................... 22 3 1 13.00 13 2 11 0 0
..................................................CTAAGTACTAGTGCCGCAAGAGTT............................................................................................. 24 1 1 13.00 13 6 0 7 0
..................................................CTAAGTACTAGTGCAGCAGGAGT.............................................................................................. 23 1 1 12.00 12 9 0 1 2
..................................................CTAAGTACCAGTGCCGCAGGAGT.............................................................................................. 23 1 1 12.00 12 7 3 1 1
...................................................TAAGTACTAGTGCCGCAGCAG............................................................................................... 21 1 1 12.00 12 1 9 2 0
...................................................TAAGTACTATTGCCGCAGGAG............................................................................................... 21 1 1 12.00 12 2 9 1 0
..................................................ATAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 12.00 12 10 2 0 0
..................................................AAAAGTACTAGTGCCGCAGGAG............................................................................................... 22 2 1 12.00 12 12 0 0 0
..................................................CTAAGTACTAGTGCCTCAGG................................................................................................. 20 1 1 12.00 12 6 6 0 0
..................................................CTAAGTACTAGTGCCGCAGGCGT.............................................................................................. 23 1 1 12.00 12 9 0 3 0
..................................................CTAAGTACTAGTGCCGAAGGA................................................................................................ 21 1 1 12.00 12 11 1 0 0
..................................................CTAAGTACTAGTGCCGCCGGAGT.............................................................................................. 23 1 1 12.00 12 3 9 0 0
..................................................CTAAGTACTGGTGCCGCAGGAGT.............................................................................................. 23 1 1 11.00 11 6 2 2 1
...................................................TAAGTACTAGCGCCGCAGGAG............................................................................................... 21 1 1 11.00 11 3 8 0 0
..................................................CTAAGAACTAGTGCCGCAGG................................................................................................. 20 1 1 11.00 11 6 5 0 0
...................................................TAAGTACTAGTGCCACAGGAG............................................................................................... 21 1 1 11.00 11 3 7 1 0
...................................................TAAGTACTAGTGCCGTAGGAG............................................................................................... 21 1 1 11.00 11 2 8 0 1
..................................................CTAAGTACTAGTACCGCAGGAGT.............................................................................................. 23 1 1 11.00 11 8 3 0 0
..................................................CTAAGTAGTAGTGCCGCAGGAG............................................................................................... 22 1 1 11.00 11 4 5 0 2
..................................................CTAAGTACTAGTGCCCCAGGAGT.............................................................................................. 23 1 1 11.00 11 7 1 1 2
..................................................CCAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 11.00 11 7 3 1 0
..................................................CTAAGTGCTAGTGCCGCAGGA................................................................................................ 21 1 1 11.00 11 7 3 1 0
...................................................TAAGTACTAGTGCCGCAGGATT.............................................................................................. 22 1 1 10.00 10 0 10 0 0
..................................................CTAAGTACTAGAGCCGCAGGAGT.............................................................................................. 23 1 1 10.00 10 3 3 3 1
..................................................CTCAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 10.00 10 7 0 3 0
..................................................CTAAGTACTAGTGCTGCAGG................................................................................................. 20 1 1 10.00 10 2 7 0 1
..................................................CTAAGTACTAGTGCCGCAGGAGTTAA........................................................................................... 26 1 1 10.00 10 8 0 2 0
...................................................TAAGTACTAGTGCCGCAGGCG............................................................................................... 21 1 1 10.00 10 6 1 0 3
..................................................CTAAGTACTATTGCCGCAGG................................................................................................. 20 1 1 10.00 10 7 2 1 0
..................................................CTAATTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 10.00 10 9 1 0 0
..................................................CTAAGTACTAGTGCCGCCGG................................................................................................. 20 1 1 10.00 10 6 3 1 0
..................................................CTAAGTACTAGTGCCGCGGGAGT.............................................................................................. 23 1 1 10.00 10 8 1 0 1
..................................................CTAACTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 9.00 9 1 6 1 1
..................................................TTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 9.00 9 1 7 1 0
...................................................TAAGTACTAGAGCCGCAGGAG............................................................................................... 21 1 1 9.00 9 0 9 0 0
..................................................CTAAGTACTAGTGCAGCAGGA................................................................................................ 21 1 1 9.00 9 7 0 0 2
..................................................CTAAGAACTAGTGCCGCAGGAT............................................................................................... 22 2 1 9.00 9 8 1 0 0
..................................................CTACGTACTAGTTCCGCAGGAG............................................................................................... 22 2 1 9.00 9 2 7 0 0
..................................................CTGAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 9.00 9 5 4 0 0
..................................................CTAAGTACGAGTGCCGCAGGAG............................................................................................... 22 1 1 9.00 9 6 0 1 2
..................................................GTAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 9.00 9 8 1 0 0
.................................................GCTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 24 1 1 9.00 9 0 9 0 0
..................................................CTAAGTACTAGTGCCGCAGGGT............................................................................................... 22 2 1 9.00 9 3 4 2 0
..................................................CTAAGTAAAAGTGCCGCAGGAG............................................................................................... 22 2 1 8.00 8 7 0 0 1
..................................................CAAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 8.00 8 6 2 0 0
..................................................CTAAGTACTAGTGGCGCAGGA................................................................................................ 21 1 1 8.00 8 4 3 1 0
..................................................CTAAGTACTATTGCCGCAGGAGTT............................................................................................. 24 1 1 8.00 8 8 0 0 0
.................................................TCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 1 1 8.00 8 0 8 0 0
..................................................CTAAGTACTAGTCCCGCAGG................................................................................................. 20 1 1 8.00 8 4 2 0 2
..................................................CTAAGTACTAGTGCCGTAGGAGT.............................................................................................. 23 1 1 8.00 8 6 0 2 0
...................................................TAAGTACTAGTGCCGCAGAAG............................................................................................... 21 1 1 8.00 8 3 0 5 0
..................................................CTAAGTACTAGTGCCGCAGGTTT.............................................................................................. 23 2 1 8.00 8 1 6 1 0
..................................................CTAAGTACTAGTGCCGCAGGAGTTTA........................................................................................... 26 2 1 8.00 8 8 0 0 0
...................................................TAAGTACTAGTGCTGCAGGAG............................................................................................... 21 1 1 8.00 8 1 6 0 1
...................................................CAAGTACTAGTGCCGCAGGAG............................................................................................... 21 1 1 8.00 8 2 3 0 3
..................................................CTAAGTACTAGTGCCGCAGGAGTAAA........................................................................................... 26 2 1 8.00 8 6 1 1 0
..................................................CGAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 8.00 8 0 8 0 0
..................................................CTAAGTACTAGTTCCGCCGGAG............................................................................................... 22 2 1 7.00 7 0 7 0 0
...................................................TAAGTACTAGTGCCGCAG.................................................................................................. 18 0 1 7.00 7 0 7 0 0
..................................................CTAAGTACTAGTGCCGCAGGACT.............................................................................................. 23 1 1 7.00 7 5 2 0 0
.............................................................................................CTCCTGCTGCCCAAGTGCTTATT................................................... 23 0 1 7.00 7 2 2 0 3
......................................................CTACTAGTGCCGCAGGAG............................................................................................... 18 1 1 7.00 7 2 0 0 5
..................................................CTAAGTACTAGTGCCGTT................................................................................................... 18 2 2 7.00 14 13 1 0 0
..................................................CTAAGTACTAGTGCCGCGGG................................................................................................. 20 1 1 7.00 7 3 3 0 1
..................................................CTAAGTACTAGTGCCACAGG................................................................................................. 20 1 1 7.00 7 3 4 0 0
..................................................CTAAGTACTAGTGCCGCTGGA................................................................................................ 21 1 1 7.00 7 6 0 0 1
..................................................CTAAGTCCTAGTGCCGCCGGAG............................................................................................... 22 2 1 7.00 7 0 7 0 0
..................................................CTAAGTACTACTGCCGCAGG................................................................................................. 20 1 1 7.00 7 3 4 0 0
...................................................TAAGTACTAGTGCCGCAGGGG............................................................................................... 21 1 1 7.00 7 2 4 1 0
...................................................TAAGTACTAGTGCCGCATGAG............................................................................................... 21 1 1 7.00 7 3 3 0 1
..................................................CTAAGTGCTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 7.00 7 5 1 0 1
..................................................CTAAGTACTAGTGAAGCAGGAG............................................................................................... 22 2 1 6.00 6 5 0 0 1
..............................................................................................TCCTGCTGCCCAAGTGCTTATTAA................................................. 24 0 1 6.00 6 2 3 0 1
..................................................CTAAGTACTAGTGCCGCACGAGTT............................................................................................. 24 1 1 6.00 6 3 0 3 0
...................................................TAAGTACTAGTGCCCCAGGAG............................................................................................... 21 1 1 6.00 6 4 1 1 0
..................................................CTAAGTACTAGTGCCGCATGAGTT............................................................................................. 24 1 1 6.00 6 1 1 4 0
..................................................CTAAGTACTAGTGCCGAAGGAGT.............................................................................................. 23 1 1 6.00 6 4 2 0 0
..................................................CTTAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 6.00 6 2 4 0 0
...................................................TAAGTACTAGTGCCGCAGGAGTTA............................................................................................ 24 0 1 6.00 6 6 0 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGGT............................................................................................. 24 1 1 6.00 6 3 1 2 0
.....................................................AGTACTAGTGCCGCAGGAGT.............................................................................................. 20 0 1 6.00 6 0 6 0 0
..................................................CTAAGTACTCGTGCCGCAGGA................................................................................................ 21 1 1 6.00 6 3 1 0 2
..................................................CTAAGTACTAGTGCCGCAGC................................................................................................. 20 1 1 6.00 6 3 3 0 0
...................................................AAAGTACTAGTGCCGCAGGAG............................................................................................... 21 1 1 6.00 6 2 4 0 0

Anti-sense strand reads

TACAAATTTGATCTACATGTCACACGGCAGATGAATGGTTCAAGCGAAAGGATTCATGATCACGGCGTCCTCAATCCAAGCACAGGCGTTATGGAGGACGACGGGTTCACGAATAATTTCGCCGCTCAACGGGTCGTTTTCTTATGTGGCACGAGTCACGAAGCTAA

************************************..(((.((((((((..((((((((...((.(((((((....(((((....)).)))..))))))).))...))))))))..))))))..)).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body
...............................................................................GCACAGGCGTTATAGAGGTTG................................................................... 21 3 2 0.50 1 1 0
...............................................................................GCACAGGCGTTATAGAGGTT.................................................................... 20 3 5 0.20 1 0 1
................................................................................CACAGGCGTTATAGAGGTTG................................................................... 20 3 8 0.13 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:12715182-12715348 + dse_3 confident ATGT-------------------------------------------TTAAACT---AGA--TGTACAG----------------------TGTGCCGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACCGTG--C-----T----CAGT-----GCTTCGATT
droSim2 3r:11889134-11889300 + dsi-mir-252 Known_mirbase ATGT-------------------------------------------TTAAACT---AGA--TGTACAG----------------------TGTGCCGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACGGTG--C-----T----CAGT-----GCTTCGATT
dm3 chr3R:9289902-9290068 - dme-mir-252 Known_mirbase ATGT-------------------------------------------TAAAACT---AGA--TGTACAG----------------------TGTGCCGCC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACGCTG--C-----T----CAGT-----GTTTCGATT
droEre2 scaffold_4770:12350646-12350812 + der_1 confident ATGT-------------------------------------------TAAGCCT---AGA--TGTACAG----------------------TGCTAGATG-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACAAAGTG--C-----T----CAGT-----GCTTCGATT
droYak3 3R:13597982-13598155 - dya_6 confident ATGT-------------------------------------------TTAAACT---AGA--TGTATAGTGCTAGA---------------TGTACGATG-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACAGTG--C-----G----CAGT-----GCTTCGATT
droEug1 scf7180000409802:705157-705331 + ATAT-------------------------------------------ATATAATCGTAGA--TATATA----TAGTTA-------------TATCGTGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTGCAACAAA------------------------------------------G--------A----AATGAAAACCC--A-----C----TAGT-----ATTTCGATT
droBia1 scf7180000302402:2002497-2002653 - ATAT-------------------------------------------GT----------G--TTT-----------------------------CCCAGT--------------------GCCCACTT-------------------------------------ACCG----AGCTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCACCGCA------------------------------------------A-----GTGA----GAGAGAAAGTG--A-----C-------C-----GGTTCGGTT
droTak1 scf7180000415380:69896-70067 - ATGT---A---------------------------------------TTAGATT---ATA--TTTA-AG----------------------AGT---GCC-----------------------TACTT-------------------------------------ACCG----AGCTCACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCATCAGT------------------------------------------AT--GAGTGA----AAAACA--GTGAAGTGATTC-------C-----AATTCGATT
droEle1 scf7180000491047:1912664-1912817 + ACAT-------------------------------------------AT--------------ACAGAG----------------------TGTATCAGT-----------------------TACTT-------------------------------------ACCA----AGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAT--------------------------------------------------TGA-----ATA---AGCG--A-----C----TTCC-----GTTTCGTTT
droRho1 scf7180000778831:19459-19612 - ATAG-------------------------------------------AT--------------ATAGAT----------------------GGCAGCTAT-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAG--------------------------------------------------TGA----AA----AAGTG--A-----C----TCCC-----ATTTTGATT
droFic1 scf7180000453906:210223-210375 + ATAT-------------------------------------------AT----------A--TTTAACG----------------------AG---TGAT-----------------------TACTT-------------------------------------ACCG----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-GTTGTCCATCAA--------------------------------------------------TGA-AG-A------AGTG--A-----C----CAGT-----GATTCGATT
droKik1 scf7180000302392:529114-529322 + GCAC-------------------------------------------ACAACCC---GCGGGTGAATA----T-GAAA-------------TACGATACT-----------------------TACTCATAAGGCTTTCTTCCGAAAGGAAAATCCCAAGCCGATGCCG----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GATGCCCAACCTGCTAGCCC----------------------------------------AGTGA----AA------GA----------------AT-----GATTCATCT
droAna3 scaffold_13340:1848635-1848848 - dan_1 confident GCCTTGAATTGAGGTATCAGTGCAGAGTACTTAGCCCCAACCATTGG---------------TAAATA----T-TG-ATTTTATACTTACAT-------------------------------T-------------ACTTCC---------------------TG-CG----AAGTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCAAA------------------------------------------ATACAAG--G----AATACAAAA----A-----A----CAGT-----GATTTGATA
droBip1 scf7180000396712:2482739-2482948 + GCCTTGAATTGAGCTATCATTGCAGAGTACTTACCCCAAACCAATGG---------------TAAATA----T-TG-A-------------TTTTGTACT-----------------------TACTT---------ACTTCC---------------------TG-CG----AAGTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCGAA------------------------------------------ATAC-----------AAACACAAGA--A-----A----CAGT-----GATTTGATA
dp5 2:16736601-16736758 - dps-mir-252 Known_mirbase GCAC-------------------------------------------TTACCTT---GTA--CATACA-----------------------TATCTTGTG-----------------------CATTT-------------------------------------TGGC----GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG--------------------------------------------------TGA----AACGCA--GT----------------GT-----GATTTAGTT
droPer2 scaffold_0:3659160-3659317 + dpe_5 confident GCAC-------------------------------------------TTACCTT---GTA--CATACA-----------------------TATCTTGTG-----------------------CATTT-------------------------------------TGGC----GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG--------------------------------------------------TGA----AACGCA--GT----------------GT-----GATTTAGTT
droWil2 scf2_1100000004943:6363143-6363360 - dwi_6 confident TAAT-------------------------------------------TTA------------------------------------------------TGCATTTTCCAGATGGATCAATACTTACTTG---A--------------------------------A-CGAAGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-CTTTACCTACTTAAAAAGCCAGTCAGTCTATCGACTATATATTTCAAATGGAAGTAA--AAGTGA----AAGACA--AG----------------ATATTTTG--TAAATT
droVir3 scaffold_12855:2861518-2861657 + dvi-mir-252 Known_mirbase --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTA-GTTTTCCACCAGC------------------------------------------AA--C--AATTAGAAATGTACTTTA--TTTATTTTAA--TTT-----ATTTTCCTT
droMoj3 scaffold_6540:10349227-10349360 - dmo_2 confident --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGA-GTTTTTCAACAGC------------------------------------------AG--C--AATTA--A--ACAAAATT--A-----CTAATTTTT----TTTTTTTTTA
droGri2 scaffold_14906:3807793-3807967 - dgr_6 confident ATGT-------------------------------------------GGTAAGT---AGT--T-CGTGT----------------------TGTGGCACT-----------------------TACTTG---A----GCTTGA---------------------TG-C-----GTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGA-ATTTTCCAACAAT------------------------------------------GTGCGAGTGA----AA------GTC--C-----T----TTTT-----GTTTTTTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
ATGT-------------------------------------------TTAAACT---AGA--TGTACAG----------------------TGTGCCGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACCGTG--C-----T----CAGT-----GCTTCGATTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221187152.00187152454541864315441107614
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21137258.003725813456201894220842
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23116434.00164344483108541210454
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2116044.00604431572882862313
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2014691.0046911994195522450
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2412119.002119272214401593
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2211552.0015525778055840
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2011148.0011488702514239
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2311063.0010634133916595
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2211019.001019344366633
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................251771.0077170804617
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221589.00589396136174
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211485.00485199151270
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231323.00323592522217
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221269.0026912685130
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191268.0026812952132
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................231210.00210401412144
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201173.001731571015
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221150.001505617671
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................211147.001471202124
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................211142.001421571119
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191140.001401211117
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................211124.001243541372
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................181102.00102111486
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19198.009805192
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20192.0092335153
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................22191.00911452052
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................23187.0087582522
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................24180.0080134261
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23174.0074233048
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23172.0072533313
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................21163.0063322326
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24160.006062052
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21157.005754102
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20157.005710155
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23152.0052181726
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22151.0051331017
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAT...................................................................................................................................................................25150.005016043
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23147.00471013177
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25145.004533138
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24144.0044183023
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21141.004122532
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................26140.004042034
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22135.003531004
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................22134.0034810214
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21129.002926003
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................21129.0029611012
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20129.002960221
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20127.002771217
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19126.002623003
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21125.002519006
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19125.002519024
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20122.0022120010
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21122.002270312
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21121.002114016
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22119.001952012
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20117.001714003
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18116.001613012
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22113.001310003
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTTT......................................................................................................................................................................22113.001311002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................26110.00100208
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGGT......................................................................................................................................................................2219.0094203
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTA..................................................................................................................................................................2618.0080008
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................1817.0077000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................2317.0072032
........................................................................................................................................................................................CTAAGTACTAGTGCCGTT..........................................................................................................................................................................1827.001410013
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTAA........................................................................................................................2416.0063012
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................2416.0060006
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2016.0066000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGC........................................................................................................................................................................2016.0063003
droSim2
ATGT-------------------------------------------TTAAACT---AGA--TGTACAG----------------------TGTGCCGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACGGTG--C-----T----CAGT-----GCTTCGATTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................22118865.001886519676471612162434809018345153174303412962172266106
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21115675.001567577814927105653410244113925051856135320346366
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................1916581.0065819211421235620520011015003
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2016285.006285259582192294541316338141504013
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................1814047.0040473203215381501016000001
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2312207.00220730816536129481140196732324010136
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221957.00957838847140010001703011
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221560.00560449931220000000202000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................211462.00462123273177454000096002120
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221255.0025560121025190100005300003
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241242.00242205466135200006101011
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................231159.00159521222900900204904000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................201149.001498206255871130101000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................221119.0011900021190000001600000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................211111.001117422190010000400000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20179.0079000077200000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23169.00693527610000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................21164.0064300525400000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................19155.0055400644100000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18153.0053000205100000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................22147.0047710802601100300000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................23145.0045199540020010401000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................21145.00452810150000000001000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23143.0043000023610000400000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................21143.0043610233100000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23142.0042601042100000900100
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................22140.0040820220020000303000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21130.0030000012200000700000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20128.0028000022600000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................20122.0022310140300001000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25119.0019000021600000100000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCT..............................................................................................................................18117.0017000001700000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21116.0016105000000000001000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTA............................................................................................................................19114.0014000001400000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24113.001361020000000004000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20113.0013101020000000000000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................22112.001220100701000100000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................21112.0012101000100000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19111.001120012600000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................25110.001010000020000400021
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2119.00990000000000000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................2319.00941000200000200000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................2219.00944100000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................1919.00900040400000100000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................2318.00840100000100200000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCTC..............................................................................................................................................2416.00600000600000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................2216.00641100000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................2116.00641010000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAC.........................................................................................................................................................................1915.00541000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................2115.00550000000000000000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................1915.00520000300000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................2214.00410000000000300000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................2214.00411020000000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTA............................................................................................................................1814.00400001300000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2114.00400040000000000000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATA..................................................................................................................................................2014.00410010101000000000
.............................................................................................................................................................................................................GTTAGGTTCGTGTCCGCAATACCTC..............................................................................................................................................2513.00320000100000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................1813.00300010200000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2213.00301010000000100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................2313.00300010010000001000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2113.00301010000000100000
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................1813.00310010100000000000
...............................................................................................................................................................................................CTAGTGCCGCAGGAG......................................................................................................................................................................1513.00300000000003000000
...............................................................................................................................................................................................................TAGGTTCGTGTCCGCAATACC................................................................................................................................................2113.00301000200000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................2012.00201000100000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATC.....................................................................................................................................................................2312.00220000000000000000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2312.00200020000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGC........................................................................................................................................................................2012.00220000000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2212.00210000100000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGGC......................................................................................................................................................................2212.00211000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................2412.00220000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................2112.00201010000000000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTA............................................................................................................................2112.00200000200000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTAT...........................................................................................................................1912.00200000200000000000
..............................................................................................................................................................................................ACTAGTGCCGCAGGAG......................................................................................................................................................................1612.00200000000002000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................2412.00200010100000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCG............................................................................................................................................................................1612.00200000000002000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCG..........................................................................................................................................................................1811.00101000000000000000
dm3
ATGT-------------------------------------------TAAAACT---AGA--TGTACAG----------------------TGTGCCGCC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACGCTG--C-----T----CAGT-----GTTTCGATTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2211677515.0016775150000310048317101606361631653396576283364612401216018695571301123992743787113030131611078724424426515522444813788242492925312224984339050074636095000000000000000001115874506715863094294026597639816431364630811091906145019677445318770447403162031822212751118191691739999605339061171200212321297138222274050505434148555249201651203813169182391392114603349023971613741112271537128943226644777965154662496524011045282171228137150240612788701228060873183597713442151271507890481181713332175341096329316254852234181241148155537671000611670211120002011771262000154612456961098121113365384362512881136310112572906100877313042882132513838072108003909329225480171208141264163671213143593135410348804121020457589486141572025906419506141342888159034115735935588955208481690260126110983571826349146310675242810435121529231451333533532952696250577733901438154962707961594807382437964127744328827479485102176998451340718253851871215782064177221194089543719144116761323810154117661061292622346706129600
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................211292967.00292967000068586206381632311119828941898460110151790162492811364181427834387483051563274106416212891308022311202136400000000000000000122084980911519424115515162129710182312323256688622490262389193112603310168837154629119178275186148138122438689812751134025469713634701741489031961165122956172020054030015001525253220000832140523616857432280050801873104730993962468346611288997112650135682604461610936610542771439530029050100000126000000102747257990209229128204190598223510179160582538122421919410017417319686168758865441293452743010514322119546806184832405121011023413721242896598462300371401038259422805092791477291241834894843695241292102600259336223690247484945415314481031422113117071761358142933272495431303430778785643121436102457217580
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23195901.0095901000012835202101062342651232018800122011416814748361304972231907700270312411123331000132744511000000000000000000000015022698641552085541286343247011252417251517464549301887119921252514314662585844722562351525521016721555929931334127019201010000002020016033291320010000147057131203193907703411796191138957142616788166731378240201901572818403141010001001500000013100000307049262638562536310087246133234625590666720021551140064515290146845424281211444379319268600140343447990156302100510517263118723347149611695268346273118881716671887276022132557577572412531277167117916669187910101452108800648116987150134406917798822363390658526212002142496110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................20129496.00294960000631100001322231178346003043010456733121115855370100020104000001100001841500000000000000000010014211010125893181075198102768894238231151082052301863935197274420121012377510239154449020829842481768520112001111001000000154010200000100600753452504231576483271483307985071031686380035101227470520004020000000100000020151256234261423833234216142768325895000012168532801335103304492238929111655871260485320119050232871147337313001515682668014536828759168037129082330450458819416245300890109958126201271565224921089511019781931430
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................21129169.0029169000023300020013716000022410013048125148265170490090000130711101330000040000000000000000000000303101217432254195736108318911466949413848182027752162495271522867681128055161103711111610400100000011030001110970102000001700311102423030128935712121217729414118721021041601210234213722041110008010000000100100001096863252187612181814212176141485141829918640000314471501821192113251723861611300891711420211191041102591002652713933352811466263158388286218213184533554426967284326061222291430125233102281681383021903381822140234092921258143161119138243475713490
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................22113066.001306600002010002002225004300012001543413109991200000000000100000000007210000000000000000000002430171062302132264563811567355883492643211431822201043588781921111120971902913026000000000000000010012200001000060010006777050566711615125354513428000052117920100000010000000000000020142542610128157126499556832839000085038142850471311527530830048536850571840113010312635151137041108181241212808722326719322719150501002401422772103043001430541182151380515155925347347031432551220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................24110353.0010353000051000001023701000010000303649577601500000000201000010000004639800000000000000000000084012833102311212472152011202822124592124007152276181705083170901490000000000000000000135040000000340100714130435133436910882405647111239102073119310000000000000000000000422334477662361584403338500004612698290421786339203701231053880152130060004961742410534011320118904321025425928607310001001001213266125004101016207617132242030120137113146439567127546601070
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................2219799.0097990000365000420090006100101100109419012410000000000010000000000061330000000000000000000001056135625449326817518646688147641121489663543271310281672523185668702692301313942108211112105000000000000000000006000000000300021119718508740435137419710137314012030301231610000020000000000000000602215042351205212711670000160101811051241762190030433051100140003211331162001030281506322913120014020001705111128001000130615170445831327059013180
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2318838.0088380000323001203060401400000000000000000000000003000000000000000000000000000000001002300251470491842131083394213315317116412016550108072172213028024028187513683147000100000010000000001200000000020002018333501055229110158752131401634529016100113132320100000000000000000000020031843422133115367416616063373340214004102411420014411527275100110292601461002100247778010102011111401112314211314704630300001401319692000430044041773786033598961634714201733257480
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................2117923.007923000070000000011141200000401000000000000001000000000000000000000000000000000000000152032090315550170726001051819112926023201011018315030304171461371420000000000000000000016000000000100100260457601362411265643642081531212800000920000000000000000000000000010421132931132534121000001101434160161823292400011930027000200024619831000110032608424310190001001000030341220000004014160101223522911111105021110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................1817782.007782000000000000000303100004000451211252438171900000000000100000000001453000000000000000000020561013733324212584514611361127327321610693191441313771725030700011001116826130033000000100000000050000000000000005868504374475542130251272703611352034000916206000000000000000000400000432077500210000186664150000211434511043614006027011401050092366181504000100311180175395134170002223000040511603000030102020302323205111031510
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2217128.0071280000137221111378111628519394010050000000000000100000010000011100000000000000000000000000017400121126022124733043116602323057573371181413244337763731308045136013334033000000000002000000001610000000000006035798601582230541682125020150152067000101733010000401000000020000000111297731371372024919720442000251295210011276206140004116311414100500058016221305011501907013698911814504010312111601125161100140015016121310017250325171720020055120
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2216792.00679200009100034111280300000100300000000000000001100000000010000000000000000000000000112316301712612021456364401302725823311195112313310903016040246270376283800000000000000000000150000000001202011851636073513555916115710923230502060140313100010000000002000000200054101669415609271526527411200981281617017161173425003414919135100060001331027121503020513628064594653176127940110102401342780000001060605017127341426670103070
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................2216255.006255000052101302313000110000200410143692740000000000000000000000004800000000000000000000002240633182640918315261181273497102145249947458084526861189117110028513020110289362200000000000000000000100000000130900613011305630111818937961410616169140004057710000000000000001000000055503100011010113001600005303321003141537002051105400120004137122012000104152109128161200010000304032761100200170471211101208240109506510
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2013460.003460000021000000030003000002001121238644421000000000000000100000011100000000000000000000083000027000171115313001353158129204121001066238250902341802332130000000000000000000004000000000000200702600512714605244681312316113893000203191001000020000000000000000220120620656213155628251280000210131513051236821100108130113001400003310127220010003111502145285965013100010040391650001002801104050467134758023034410
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................2113348.0033480000600010000300011000040001012226537220000000000000000000000180000000000000000000000165006512202513192380151122303212082633524587254553291401881305312016216160000000000000000000000000000000000009477030181095402568133924112220400125200000000000000000000000010012210000020172010000002023140441218090020160710010000211756611500101515450976450004000000301413260000002501641101115230303902560
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................2313169.0031690000110000211120000000002001120625801000000000000100000000055200000000000000000000022103870114045274982101313023731342398130263404462915214331709501030402303122000000000000000000002000000000007000515903001144641653361565000004051000000000000000000000001000002010100009001400004101330033802000004002000000004112000000020020263130000010000100166000000103020201100023001004610
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................2112996.0029960000131000000000002100003003040562501000000000000000000000013213000000000000000000000420000053014860311762738002132459811417426612677101140019300050102622737000000000000000000005000000000003100485603410992705743503960101035511000003010000000000000010005330001011031060000011777011113105002011201100020000115651001001242205231781000010200003002130101003020300022924724033050160
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................2112468.002468000010000000000010000000000000000000000010000100000000000000000000000000000000006010401000080310205003035011242001000002173511333280262192701474610000000000000000000010000000000000001726230845605544316192911000010000000000000000000000000101010000000000101000000002401302132520700212050250000000117232110002002000712412610010001000100639300000040103050018205220921920
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................1912106.002106000000000000001202000008000431422151000000000001000000000001107000000000000000000002450151014012112272563105002854893557116162233307110630207000113200010000000000000100400001000000010023178014340221925413162114000211110200001000000000000000040001112113121210248170000010685140256608008071514200030021166730000000002205151835450010000000001391000000105000106541043461204110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................2312058.0020580000220001010103001000000010000000001000000000000000000000000000000000000000000011109301003151101185171012816223248580050252210125030426020340000000000000000010040000000000050101947020641861571419222936000005000000000000000000000000011107220013030061761515500120122523011230672140010016280690006000136761100010300112300125362706502400202105096770011001202221821105154208181580402112310
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................2111994.001994000070000002100001000000000000000000000000000000010000000000000000000000000000001270002030100192004031200810632551291111022237537200801218051911000000000000000000000000000000000000144406081306119127629070900010321000000000000000000000000000610000000011166600001015116011038420100020142100200000000282100200001122304511292100210000002012420010002011102002220115020930
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................2211723.0017230000550004040207000000000000000000001000100000000000000000000000000000000000000020121205000149039220030274422150000001030164030428072840000000000000000000061001000002001009415002701310202268914420001144001000000100000010100000011031410013521526810461300110102501311848012001352500301004000027414221110010277360454031411400331032030220710272000000100822246035312910650302780
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................2511705.001705000010000000000202000000000000000000000000000000000000000000000000000000000000001000003020240092300671204890000100110210000010402600000000000000000000100000000000000001114809102151117134515154366000302200000000000000000200000000007111123261010301300000111242041557040011112016000100019121020001006180132344042000000010030246140010009053143250353683512724200450143180
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2311602.001602000050000000041000000000001130000000000000000000000000001400000000000000000000004003001811032001134114535149781220030000410530104020303400000000000000000000600000000000010015130921131002541015120001023200000000000000000000000000323111232251190009100002205161704364111700816110631001000016316210201000074120325483326000100010010411834200000260421404208717461212093168240
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTATC..................................................................................................................................................................2611599.0015990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946653000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................2111396.001396000020000001020000000000000351968232031000000000000000000000053100000000000000000000021613128000882120250112161805272890200111720421002010303300000000000000000000200000000000410028190124338424712420224153800000210000000000000000000000002130000000000113027000003002400218200001003023000000018725100000018120014341700100000001000165700000020203010072010003301100
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................201912.009120000100000000004000000040000000000010000000000000000000000000000000000000000000020000010011400413002580269010000110024000000010210000000000000000000010000000000000007523013525533362900000400100000000000000000000030205001005043201070000010004700054702000050005000000003170000000005020111462401000000000001100000000032001054315132011220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAC....................................................................................................................................................................241838.00838000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010010000005000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000027103532252000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................231726.007260000000000000100000000000010202200000000000000000000000000000000000000000000000011094237100571011430061019245131130100200016003000020101123000000000000000000000000000000100000111009002630226180000106100000000000000000000000003001100001000010009000010010800304000010010000001010110740010001050200010000100000000000018000000300021001120000080820
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................231680.00680000010000000010000000000000000000000000000000000000000000000000000000000000000002001001072061013150025132714101120001251520605510040320000000000000000000011000000000000001925090031165631493325000101400000000000000000000000000000000101000034611000010083505062612002167003000000027450000000002150825322840000000000100100000000005032202222101001101130
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................221635.0063500007100010001100000010000000000000000000000000000000000000000000000000000000000120050114040719023931201512210326599201302003502000000100000000000000000000000000000000000000006120400000000104000009000000000000000000000000000000000000000100400000000020001300000000000000100000020000000005050113130000000000000011000000100000002710001030300
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................221630.006300000400000000004010000000010000000000000000000000000000000000000000000000000000000010010100500202001090051000010010041000100030210000000000000000000000000000000000001944408310112613417100001200000000000000000000000000000000202000003400000000000000312010000020000000000021000000000000000220100100000001000100000000000000011100102000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................211608.00608000000000000000400100000000000000000000000000000000000000000000000000000000000000000000000000052300009126100000000003000010001020000000000000000000001000000000000000346403820241449150000000000000000000000000000000000210030120110103100000000020004504000000000000000000121000000000010000020000000000000000000000000000000610000000110
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................231588.0058800000000000000100000000000011825610000000000000001000000021000000000000000000000000032000000100313001218082800000100102000020102010000000000000000000002000000000200000101406214625220547700021700000001000000000000000001004620200010022370000240300001170100002000100010000418600000000003017351128210001004011102010002201419330741151043212010330
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201578.0057800000000000000010000000001232100000000000000000000000000000000000000000000000000000004020002102312001190221631000000000011010003010010000000000000000000020000000006003001413091146314839294610700031150000000000000000000000001100101100000003175500000004400102501001003012000100004113060000211133016767011000000020111240010004010001021011110030770
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................201551.00551000000000000000000000001000910231350100000000000000000000004000000000000000000000002000001000014004030040908242100000002003100032102012000000000000000000000000000000000000114309121111929171116452280000030010000000000000000000000101000000100000200000000000150016600000002001000000002155000201001010125740000000000000132000000200110001900101030310
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................231531.005310000010000000000000000000000000000000000000000000000000000000000000000000000000070000010000700605000018022400000000013001014601043000000000000000000001000000000000000256701400131571312603310001041100000000000000000000000010000000120001000610000000510104180200002900000000000200000000100000018481200000000000001000000004000501036031045080910
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................201472.00472000030000000000000000000000011105000000000000000000000000000000000000000000000000210000600005001530000166015132010011001002001000008119000000000000000000001000000000000003640400155110130700200054000000000000000000000000001012100000000100300000004101000210040000240000000000001310111000011101118161300010100001024000000001000101002511123030540
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231414.004140000300000001300010000000005120000000000000000000000000000010000000000000000000000000000000000021000000002000000000001001000204023000000000000000000001000000000000000312509185429303616668500000220000000000000000000000000310402000000003260000001044001000000001120120001000050140000000220102423401200001000014101000000000030201722301010530
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................221380.0038000000000000000000000000000011500000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000002000420000000000000000000050000000000000000401011023152538100000200000000010000000000000010000200000011022210000010120010011000000000000000000551211000201002001111911000100000110066100100008045911013241071878010320
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................241371.00371000000000000010000000000000000000000000000000000000000000000000000000000000000000000202010130051400001101860001000131200000130102300000000000000000000000000000000000092905213621185212500000600100000000000000000000000200000004020083042000000242000370200100130000001000031000000000010300856100000000000102041000000000040403395102101301760
........................................................................................................................................................................................CTAAGTACTAGTGCCGCATTT.......................................................................................................................................................................211335.003350000000000000001000000000000000000000000000000000000000000000000000000000000000020000010001200600000090200000000010000000000000000000000000000000000000000000000000001017400147142806427122000000000000000000000000000000000000000000000010100000001000000100000000010000000000000000000000000010100000000000000020000000000000000110010000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCATT........................................................................................................................................................................201327.0032700000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001003110002902010000001100000000000000000000000000000000000000000000000000012280234027063311000000000000000000000000000000000000000000010010000000000000000500002000001000000002000000000000000111450000000000000060000000000000001700000020110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................241320.003200000000000000001000000000000000000000000000000000000000000000000000000000000000000000010102100301002011080400300001401202000400020000000000000000000000000000000000000434044348981936121100001110000000000000000000000000000200000000010000101000000010001128020000240000001000020000000000000101654200000000000000100000001010101031910113020510
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................191308.0030800000000000000000000000000102141200000000000000000000000010000000000000000000000010000400001005050002006101200000000002000020104211000000000000000000003000000000000000240100111142100030003032100000000000000000000000000001100000000000200000011730001190000001400000000000217500000001101011812121600100100004000040000000020011001831001010120
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................211307.003070000000000000000000000000000120000000000000000000000000001000000000000000000000001000000000000000200103000000000000002100010000000000000000000090000003000000000000000212020053331266430000012000000000000000000000000000000010001000000010000000140000130000000000000010000011001000000001001917131401100000005049000000001010204052432956000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191303.00303000000000000000010000000000120000000000000000000000000000000000000000000000000000000102000000010200009148310200000100120003010000000000000000000000000000000000000000053305112335292022100013400000000000000000000000010103100000100032550000000021011118010000030000000000032320000000010300425300000000001001700000000021100001130001020110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................221284.0028400000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010003100030501510000000020730102010815110000000000000000000010000000000000002663013000000001000000000000000000000000000000000000100000000000310000021070301051214000013200500000000110500000010110303131140500000000100300000000000000000100001000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................221283.0028300002000010001000100000000000000000000000000000000000000000000000000000000000000200000500015000200002408254200000002000100020000040000000000000000000000000000000000000220101514031505500000130000000000000000000000000000000000000011911242100000001000060200300500000000000201100000000201001011000000010010201200000020000000010000010150230
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................201280.00280000000000000010000000000001000000000000000000000000000002000000000000000000000000000107000130143200141811424280001010300400000000301100000000000000000000000000000000000071901207344031900000025000000000000000000000000000000000000000100100000000100000300000001011000000002172000100011000225010000000000102142000000200001000510000050430
........................................................................................................................................................................................CTAAGTACTAGTGCCGTT..........................................................................................................................................................................181264.002640000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000001412000090125000000000030010000000000000000000000000000000000000000000003250122035088133280000100000000000000000000000000010000001000001020000000014000014000000000100000000011100000000004001121620350002040000001130000000000000000910000030000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................251250.00250000000000000000000000000000010000000000000000000000000005610000000000000000000000000002000020020000171500110100000100010000000101000000000000000000000000000000000000041202001302160440001060000000000000000000000000000000000002000000010000015001068030000120000000000020010000000000201610812000000100000003200000030000080438310310401110
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................191245.0024500000000000000010000000000014334100000000000000000000000000000000000000000000000200000401050002020020130714362000000120120000010001000000000000000000000100000000000000054082128434221110001042000000000000000000000001000110000100001113300000000000000200000001000000100002010110000001220101280001000001000121000000002000100001002020300
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATC.....................................................................................................................................................................231230.00230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000100000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000012015363000000000000002000010000000000000010000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTTT......................................................................................................................................................................221213.0021300001000000000000000000000000000000000000000100000000000000000000000000000000000000100001001000010010000210000000000100000000002000000000000000000000000000000000000001590112003030304000000000000000000000000000000000010001011110164100000000100000001000000001000000000000000000000000001010000000000000000000000001000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................241207.00207000000000000111000000000000000000000000000000000000000000000000000000000000000000000001000010030200005013180000000000000000000100000000000000000000000000000000000000000000034012202000020131000000000000000000000000000100001103001600700000001510101520000004000000000000020000000000010028650000000000000025000000101000202191000301401330
droEre2
ATGT-------------------------------------------TAAGCCT---AGA--TGTACAG----------------------TGCTAGATG-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACAAAGTG--C-----T----CAGT-----GCTTCGATTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221346695.003466959293315563639122772170819176169
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21158131.00581312574831425262262187271300
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23124541.002454162191778281854841663711
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................21111341.0011341648576223358036140
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2015724.005724301834339923720870
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2213798.0037981225341173312822610
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2412218.002218288840156018043
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2012145.00214518134262372630
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2312015.0020159271136172310010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2211424.0014245867851397060
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2211407.00140739828012129021
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................251798.0079868060187060
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211713.007133612581232680
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................231515.005158821310273750
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221504.00504218234862360
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231443.00443483219473330
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201395.003953214803590
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221362.00362647936381720
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191291.00291159218213970
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................211266.002662094503450
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................221235.0023519214741890
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................181228.002282312051970
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191215.002151890303200
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................231207.002076601101390
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................211164.0016430012071150
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231156.001561101611370
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAT...................................................................................................................................................................251156.00156602051430
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................241142.001422500171090
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................211137.00137570204740
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................211132.00132371819760
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................211111.00111940000170
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23198.0098320632550
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19188.0088490202350
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19178.007871000160
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21175.0075403411350
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23175.0075400201320
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24172.0072190001520
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21171.0071580100120
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22167.0067500012140
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21165.0065470101160
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25164.006450100580
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20163.0063250705260
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19153.005350201450
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22151.005140050150
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20146.004660503320
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18142.0042220211160
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................22141.0041941111150
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................26141.0041120002270
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20139.003991401240
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23138.0038643312100
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22136.003628400040
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTGT...................................................................................................................................................................25135.003510302290
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24134.0034140302150
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTG....................................................................................................................................................................24131.003140505170
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21130.003040103220
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................21126.002610107170
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20124.002422000020
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................26123.002310002200
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20122.002216000060
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAG...................................................................................................................................................................25119.001920000170
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................24118.001830000150
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22118.00184500090
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21117.001713100030
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20117.00174030370
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21116.001616000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23116.00166301060
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATA.....................................................................................................................................................................23115.001550000100
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTG...................................................................................................................................................................25115.001500004110
droYak3
ATGT-------------------------------------------TTAAACT---AGA--TGTATAGTGCTAGA---------------TGTACGATG-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGCCCAGCAAA------------------------------------------A--------G----AATACACAGTG--C-----G----CAGT-----GCTTCGATTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................22194623.009462392940954807943931308624234288387500
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21117306.001730621411350870328145827163592153
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2315585.00558515433167253063316101380140
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2113960.0039603931632767243372490000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2011846.001846361030759216450300000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................201919.00919385695182170000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221855.0085534625410195950000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221830.008303850016842304840000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................231576.00576144276022172780010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221494.0049422316370266870000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................221385.003855270204374540000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241353.00353718848371639180000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211302.003022118700365620000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221225.0022512171101102010000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201225.002254216200300000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231193.00193418141681600000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191175.00175318830182722130
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................23188.00880651741100000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23181.00810411867630000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21176.0076620056300000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................25174.0074248233880000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................19170.0070163102300000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................21164.0064145335700000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................21164.00643477331000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................21159.005912500141900000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23154.00541923433200000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19146.00460300192400000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19144.0044041200100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20141.00413190081100000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22141.0041233410100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................18139.00390181061110020
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22139.0039038001000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23139.0039026125500000
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18134.0034030101110000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19132.0032128011100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22131.0031025100500000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................22130.0030016434300000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23127.0027221261310000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21124.0024022200000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20124.0024120014700000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................22121.002137103430000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23120.0020017000120000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22119.0019014500000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24118.0018015110010000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................22117.0017200141000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................24116.0016013100110000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21116.0016015001000000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18115.0015014100000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20114.0014014000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21114.001492200100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21112.0012110001000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24112.001219110000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23111.001116200200000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................21111.001102301410000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21111.001104061000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................18110.001009001000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................2019.00902202300000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................2018.00805002100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................2418.00802500100000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................2218.00825100000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGGC......................................................................................................................................................................2217.00700310300000
...............................................................................................................................................................................................................TAGGTTCGTGTCCGCAATACC................................................................................................................................................2117.00702300020000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................1817.00706001000000
droEug1
ATAT-------------------------------------------ATATAATCGTAGA--TATATA----TAGTTA-------------TATCGTGTC-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTGCAACAAA------------------------------------------G--------A----AATGAAAACCC--A-----C----TAGT-----ATTTCGATTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAT-------------------------------------------GT----------G--TTT-----------------------------CCCAGT--------------------GCCCACTT-------------------------------------ACCG----AGCTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCACCGCA------------------------------------------A-----GTGA----GAGAGAAAGTG--A-----C-------C-----GGTTCGGTTSizeHit CountTotal NormTotal
No Reads
droTak1
ATGT---A---------------------------------------TTAGATT---ATA--TTTA-AG----------------------AGT---GCC-----------------------TACTT-------------------------------------ACCG----AGCTCACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCATCAGT------------------------------------------AT--GAGTGA----AAAACA--GTGAAGTGATTC-------C-----AATTCGATTSizeHit CountTotal NormTotal
No Reads
droEle1
ACAT-------------------------------------------AT--------------ACAGAG----------------------TGTATCAGT-----------------------TACTT-------------------------------------ACCA----AGTGCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAT--------------------------------------------------TGA-----ATA---AGCG--A-----C----TTCC-----GTTTCGTTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATAG-------------------------------------------AT--------------ATAGAT----------------------GGCAGCTAT-----------------------TACTT-------------------------------------ACCA----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAACAG--------------------------------------------------TGA----AA----AAGTG--A-----C----TCCC-----ATTTTGATTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAT-------------------------------------------AT----------A--TTTAACG----------------------AG---TGAT-----------------------TACTT-------------------------------------ACCG----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-GTTGTCCATCAA--------------------------------------------------TGA-AG-A------AGTG--A-----C----CAGT-----GATTCGATTSizeHit CountTotal NormTotal
No Reads
droKik1
GCAC-------------------------------------------ACAACCC---GCGGGTGAATA----T-GAAA-------------TACGATACT-----------------------TACTCATAAGGCTTTCTTCCGAAAGGAAAATCCCAAGCCGATGCCG----AGTTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GATGCCCAACCTGCTAGCCC----------------------------------------AGTGA----AA------GA----------------AT-----GATTCATCTSizeHit CountTotal NormTotal
No Reads
droAna3
GCCTTGAATTGAGGTATCAGTGCAGAGTACTTAGCCCCAACCATTGG---------------TAAATA----T-TG-ATTTTATACTTACAT-------------------------------T-------------ACTTCC---------------------TG-CG----AAGTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCAAA------------------------------------------ATACAAG--G----AATACAAAA----A-----A----CAGT-----GATTTGATASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221159620.0015962090544140026820739503941630
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21153029.0053029403713054022525609501
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23120015.002001578991863856419411134
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2119328.009328741688495821319
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2016536.0065365319382456107614
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2213755.003755183144681201773
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2013534.0035343172508110266
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2413039.00303963919742432289
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2212240.0022401504606338629
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................2511671.0016712061017231424
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2311090.0010906529493413
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................221905.0090560220374260
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211781.007816151065793
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221703.0070353432301133
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231592.005922345803120249
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201588.005885403014328
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................231526.005261513181362
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191442.004424130010019
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191346.003462712336925
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221333.0033316679163420
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................241311.00311520336247
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................211287.002871772061101
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................221231.00231215002014
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................181222.00222832137198
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................211202.00202900018094
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................221196.00196563281126
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................211177.00177125404044
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................191167.0016716420001
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................231156.0015667008081
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231150.00150126507012
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................221147.0014754414282
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................211139.00139117103117
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................261136.00136110014120
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................231133.00133190022110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23195.009556014034
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21186.0086110032241
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................21186.0086403016324
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22166.006645202116
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19164.00646110002
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23164.00645440105
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21161.006149001011
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23155.005525001326
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18151.00514810002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20150.00503200756
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25150.00507000043
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20147.00474700000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22147.00473900008
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19144.004418001709
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24144.004425001018
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22143.00432480209
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................21143.004321000121
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTG...................................................................................................................................................................25138.00382000234
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAT...................................................................................................................................................................25138.00383002033
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20136.0036110013111
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTT.........................................................................................................................23135.00352700503
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24133.00338000025
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18132.00323000002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTG....................................................................................................................................................................24126.00264002416
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18124.00242400000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21124.00241710006
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................24124.002411100012
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTGT...................................................................................................................................................................25123.00232004116
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATA.....................................................................................................................................................................23122.00222100001
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20121.00211411113
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21121.00211410213
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAT..................................................................................................................................................................26121.00212001018
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................18119.00191900000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20119.00191200205
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................26118.00181000017
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................25118.00182000115
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................22117.00170001313
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23115.0015410253
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................24115.00153000012
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTTT.................................................................................................................................................................27115.00153000012
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................20115.00151500000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21214.50292500112
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20114.00141300001
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................22114.00141200002
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................21114.00141300100
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTAT...........................................................................................................................22114.0014310208
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................24113.00131100002
droBip1
GCCTTGAATTGAGCTATCATTGCAGAGTACTTACCCCAAACCAATGG---------------TAAATA----T-TG-A-------------TTTTGTACT-----------------------TACTT---------ACTTCC---------------------TG-CG----AAGTCGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGA-GTTGTCCAGCGAA------------------------------------------ATAC-----------AAACACAAGA--A-----A----CAGT-----GATTTGATASizeHit CountTotal NormTotal
No Reads
dp5
GCAC-------------------------------------------TTACCTT---GTA--CATACA-----------------------TATCTTGTG-----------------------CATTT-------------------------------------TGGC----GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG--------------------------------------------------TGA----AACGCA--GT----------------GT-----GATTTAGTTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221152801.001528016609244737177986780501385481121086817
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21157342.0057342338790827877378969351084013128
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................20111236.0011236171907624103413491430132
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23111159.0011159055414463161437111127130189
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2117063.00706345360182889510701490079
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2013296.00329603047613677919002
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2212498.002498015696750674173440164
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................2211906.001906113155089685951012
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................2111331.00133107631331121124000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................231805.00805038540235274080169
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................221661.006610317121811512610000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191646.0064606043212142000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231639.00639037994787153000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241596.0059602863694816633000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191549.0054904428580352004
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201434.0043403644441144003
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221421.00421126021007445002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................201254.0025401401840263000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................211251.002511150091081000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................191229.002290180441031000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221214.0021401414336264000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................231177.001770104122119142005
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231159.001590826582100001
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................221156.00156092054181000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................211147.00147012949041000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................251137.0013708661561012002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................211120.00120090574491000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................211117.0011702216548161000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................221115.00115046563010000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22189.0089061864010000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................18188.00880522150181000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19174.007406612032000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................21173.0073048214081000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20170.007006105121000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21161.0061042413020000
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18155.005505302000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23152.0052031311330001
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................18149.0049037011010000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCATT........................................................................................................................................................................20148.0048028018011000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................22145.004502045790000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................21144.004402902094000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18142.004204200000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21141.004103502040000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23140.00400141031120000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18138.003803800000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22132.003202415020000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21129.002902404010000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20128.002802002231000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGG........................................................................................................................................................................21128.0028014014000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20128.002801408060000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGC........................................................................................................................................................................20127.002702220030000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23127.002701705030002
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTTT......................................................................................................................................................................22125.002509016000000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................24122.002207312000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAT.........................................................................................................................................................................19120.002001501031000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................22120.002001131113000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGACC.....................................................................................................................................................................23119.00190819001000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................24118.001801300203000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................20118.001801701000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19117.00170801062000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................22117.001701302110000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCATTT.......................................................................................................................................................................21216.003202209001000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23115.001501101120000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24115.00150607001001
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................26115.001501202000001
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24115.001501113000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21113.00130602500000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGT........................................................................................................................................................................19113.001301300000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23113.00130614020000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................24113.00130336010000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTC......................................................................................................................................................................22113.00130507010000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20112.00120400080000
........................................................................................................................................................................................CTAAGTACTAGTGCCGTTT.........................................................................................................................................................................191011.20112083030215000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTC.......................................................................................................................................................................21111.00110208010000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20111.00110800021000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................20110.00100901000000
.............................................................................................................................................................................................TACTAGTGCCGCAGGAGT.....................................................................................................................................................................18110.00100710200000
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATAC.................................................................................................................................................2119.0090500202000
droPer2
GCAC-------------------------------------------TTACCTT---GTA--CATACA-----------------------TATCTTGTG-----------------------CATTT-------------------------------------TGGC----GGTTTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG--GTGGTCCAACAG--------------------------------------------------TGA----AACGCA--GT----------------GT-----GATTTAGTTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................22172039.0072039291110380135791206733642
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21114202.0014202850248047873545758
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2312508.002508491654785488261
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2012171.00217107326656676101
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2112002.00200237671772439794
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221508.005080214181407858
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................201454.004540341064454
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221344.0034462107093775
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211268.002680871947115
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................221244.002440713966212
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241168.001680416443146
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221132.00132457133334
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191128.00128057127376
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221117.00117046123470
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................231107.00107048828167
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................20167.006704511290
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................18164.00640916480
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20159.0059019013234
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................19157.00570470730
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21156.005602024300
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................21143.00430807271
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................21142.004205115201
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23141.00410176954
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................21136.003602017170
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................23133.003307012122
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................25128.0028070948
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................22128.00280318160
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19124.00240101220
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20122.00220205150
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20121.00210504120
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19121.00210170310
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................23121.00210130710
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21120.0020090470
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22119.00190150310
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................22117.00171102130
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21116.00160140200
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACCT...............................................................................................................................................23115.0015051540
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20115.00150101130
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23113.0013052240
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21113.0013040180
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19112.0012010902
........................................................................................................................................................................................CTAAGTACTAGTGCCGTT..........................................................................................................................................................................18311.33340203290
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23110.0010050122
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21110.0010090100
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2119.009060030
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGGT......................................................................................................................................................................2219.009010530
..............................................................................................................................................................................................................TTAGGTTCGTGTCCGCAATACC................................................................................................................................................2219.009020340
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................1818.008040301
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2118.008040220
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................2018.008040130
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2217.007030400
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................2317.007040030
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTC......................................................................................................................................................................2217.007000340
droWil2
TAAT-------------------------------------------TTA------------------------------------------------TGCATTTTCCAGATGGATCAATACTTACTTG---A--------------------------------A-CGAAGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGA-CTTTACCTACTTAAAAAGCCAGTCAGTCTATCGACTATATATTTCAAATGGAAGTAA--AAGTGA----AAGACA--AG----------------ATATTTTG--TAAATTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221171696.0017169615203452623144355789779
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21134667.003466758812096546343318004
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23119462.0019462187261962185514739
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2115486.0054862042579406222041
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2213679.003679100498174442620
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2412920.0029201618334542264
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................2212420.002420221261531111
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2012413.00241377112136891090
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2312177.0021771912553541674
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2311878.001878292434591543
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2011209.00120988501223316
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2211143.0011439280944801
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221726.00726361183068114
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................251683.00683032520626
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................221635.006351244291486
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................241585.00585133133517
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221334.0033412155131135
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201282.00282619151268
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................231262.0026211314243
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................211253.00253105007186
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191246.00246371471655
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................221189.0018914415687
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231167.0016779118132
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211126.001268481069
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................231124.0012401811104
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................211123.001236623745
..............................................................................................................................................................................................................TTTGGTTCGTGTCCGTAATACC................................................................................................................................................221111.001118724810
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191108.001080921213
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................231105.0010513490043
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................211105.0010553113236
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................211100.001001290169
..............................................................................................................................................................................................................TTTGGTTCGTGTCCGTAATACCT...............................................................................................................................................23182.00825280202
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................21173.00730601057
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23172.0072132502014
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19169.0069355029
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTAT...........................................................................................................................22167.00672170840
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................26164.0064050059
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25159.0059020354
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24158.0058130252
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................24156.0056140150
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23156.005602001125
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19152.0052043018
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21152.0052407005
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22151.00510190230
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18150.0050044024
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................18144.004401301318
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21143.0043101239
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21140.00401240015
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAA...................................................................................................................................................................25137.0037020035
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20133.00331191111
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTC...................................................................................................................................................................25132.00321110020
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21132.00320120614
.......................................................................................................................................................................................ACTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................23132.0032031010
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19130.0030230124
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTG...................................................................................................................................................................25128.0028020026
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTT.............................................................................................................................20127.0027312021
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................25127.0027000126
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGACC.....................................................................................................................................................................23125.0025240001
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21125.0025516013
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATA.....................................................................................................................................................................23123.0023020003
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20123.0023080015
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18121.0021017004
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................25119.0019020215
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18118.0018018000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................20117.0017050012
..............................................................................................................................................................................................................TTTGGTTCGTGTCCGTAATAC.................................................................................................................................................21117.001791214
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTG...................................................................................................................................................................24117.0017000017
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAAA...................................................................................................................................................................25116.0016010015
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24116.001608017
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................22116.001652018
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTC...................................................................................................................................................................24115.0015030012
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................23115.0015010014
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................26115.0015000015
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20114.001404019
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTG..................................................................................................................................................................26112.001202028
...............................................................................................................................................................................................................TTGGTTCGTGTCCGTAATACC................................................................................................................................................21112.0012100020
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22111.001130008
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTG....................................................................................................................................................................24110.001001027
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTA............................................................................................................................21110.0010000010
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................20110.001005005
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22110.001005005
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................24110.0010000010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................24110.001022006
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTTA..................................................................................................................................................................2519.00900027
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATG.....................................................................................................................................................................2319.00917001
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................2419.00906030
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTT.........................................................................................................................2318.00816001
.......................................................................................................................................................................................ACTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2218.00815020
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTG...................................................................................................................................................................2318.00820006
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................2018.00822004
droVir3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTA-GTTTTCCACCAGC------------------------------------------AA--C--AATTAGAAATGTACTTTA--TTTATTTTAA--TTT-----ATTTTCCTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221189339.0018933916676939793265355125341302024839000177391114955131381310391695819384781365395146107305134188912379952353022800315182118152200521222559011078105991431045629121586354469749171146313108331417518124141720
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21139011.0039011372051339629546261420004270248612202609225711938211619741632226227345200179420024000041400100001010340235222454407710890211341129411281281188103
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................23112371.001237113891643135040309200016179855461430860881590315312421367946501110200001600000001023131340181137103823831210018222005411
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2114762.0047625193152903100210001309451134987338511511330161810350300011200000000000000000111755111101700010003000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2013691.00369117342018412002051000956018674629138216491103353834600300002600000000101010012442638113001100003314202300
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2211375.0013750430360200000000170117531058862095130021227681100000001000000000000000000041593600000000010000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2011225.001225101053500000000002521913115010150001011130000000000000000000000000000361100200000000000100
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2311216.001216620395270000000000153574610746580639700021845160000000000100000001000000109612000100002023301000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................2211081.0010814933817640000000000614921393828138460003051050100000000000000000000010816757000100038130000010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241728.0072816724010000000010752448934690561000001050240100000000000000000010000006522100000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................221693.00693543562997000000000013407361718000000102000000000000000000000002132472400000001006000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211679.00679310155100010000007057255350230454600021724301000003000000000000000000011021100000000012000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191545.005453201802000000000043301748372702132001102126000000020000000000000011002158300000004000000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................211537.00537564600000000000684027546527110258010004721100000000000000000000000201007100100000001000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................221533.005330029300000000009538266565290777310010532800000100000000000000000001008300000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221529.005293518712000001000053233154242702228000011317000000010000000000000000011035600000002000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................221453.0045310520000000000056332448423306262000106221100000000000000000010000002109400000000000100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................251340.0034000200000000000055402037232702455000011014010000000000000000000000000024601000000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201337.003370126660000010000786633047000001132000000000000000000000000000011100000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................211281.00281012801000000000272482635190504100000025400000000000000000000000000009100000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191181.00181001690000000000001120000200000100100000000000000000000000000004000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................181147.001470040000000000001812101789010700010222100000000000000000000000000008000000000000000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................201146.001460060000000000013136102660272200001112400000001000000000000000000005200000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231139.0013948113400000000008631155029000001000000000000000000000001000000524200000000000000000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231139.00139007060000000000793256071400000030100000000000000000000000101004000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................211120.001201050000000000010141151230241000000000000000100000000000000000000033000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................201118.001180435000000000008661144098000001312000000000000000000000000000015000000000100000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................21191.009112281350000000000531021011000000001000000000000000010000000010014200000000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19190.009000800000000000022121100000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19185.008500760000000000012121000100000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................23179.00790060000000000087410612081000000000400000000000000000000000000013000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19170.0070001900000000000544664045000000000010000000000000000000000000012000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23164.006402210000000000072180505500000000100000000000000000000000000005200000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24161.006102170000000000063392004500000201200000000000000000000000000103100000000000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................21159.005900500000000000435283018600000100000000000000000000000000000001100200000000000000
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18159.005900500000000000013010100100000000000000000000000000000000000011000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20158.005800600000000000461151093000012002000000020000000000000000000015000000000000000000
..............................................................................................................................................................................................................TTAGGTTTGTGTCCGCAATGCCT...............................................................................................................................................23151.0051011200000000000101031004900000000000000000000000010101021000200000000001000100000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................24150.005041111000000000025031501700000002200000000000000000000000000000200000000030000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23148.004819190000000000022031400000000000000000000000000000000000000016000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22147.004700390000000000002100001200000000000000000000000000000000000000100000000000000001
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTC.........................................................................................................................22147.004700120000000000012016307600000001400000000000000000000000000000000400000000000000
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................20142.004200120000000000061233204300001001000000000000000000000000000004000000000000000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTT.........................................................................................................................22140.004010300000000000522730011600000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTC.........................................................................................................................23136.00360080000000000001140406300000002500000000000000000000000000000000200000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23135.00350190000000000054311201500000000000000000000000000000000000012000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................26134.00340010000000000052652403400000000000000000000000000000000000002000000000000000000
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22134.003400291000000000010100000100000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTT.........................................................................................................................23133.00330040000000000006013109700000001100000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22131.003101170000000000020011200200000000000000000000000000000000000005000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21127.002700190000000000001102301000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................22125.002503000000000000000001210000000000000000000000000000000000000018000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21125.00250070000000000024400100500000000000000000000000000000000000002000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21124.002401180000000000011000100100000000000000000000000000000000000000001000000000000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTAA........................................................................................................................23124.00240000000000000042054101500000001000000000000000000000000000000100000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTA...................................................................................................................................................................25123.00230040000000000022010201600000100000000000000000000000000000013000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18121.002100150000000000001100101000000000100000000000000000000000000001000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAT.........................................................................................................................................................................19121.00210070000000000032123001100000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21121.002100140000000000031010100000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18118.001800160000000000011000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTA............................................................................................................................19117.00170010000000000020023102400000010000000000000000000000000000001000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20115.001500140000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTAT...................................................................................................................................................................25115.00150000000000000031110202200000000000000000000000000000000000002100000000000000000
..............................................................................................................................................................................................................TTAGGTTTGTGTCCGCAATGC.................................................................................................................................................21114.00140010000000000041011000100000000200000000000000000000000000003000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTCT...................................................................................................................................................................25114.00140120000000000023010001400000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20113.00130080000000000010001000000000000000000000000000000000000000003000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTC...................................................................................................................................................................25113.00130151000000000010000000300000000000000001000000000000000000000000000000001000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21113.00132530000000000001000000000000000000000000000000000000000000002000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTA....................................................................................................................................................................24112.00120040000000000021020000101000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CTCCTGCTGCCCAAGTGCTTATT..........................................................................................................................23111.00110031000000000001100103100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATC..........................................................................................................................22111.00110030000000000011000102200000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCC......................................................................................................................................................................22111.00110200000000000000000010000000000000000000000000000000000001007000000000000000000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................18111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................24110.00100000000000000000040201100000000000000000000000000000000000002000000000000000000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAA..................................................................................................................................................................26110.00100000000000000030021100200000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................20110.00100090000000000000000000100000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGA-GTTTTTCAACAGC------------------------------------------AG--C--AATTA--A--ACAAAATT--A-----CTAATTTTT----TTTTTTTTTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................221249513.0024951314395474612398833607312719232
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................21166586.0066586553692673103377928851183
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................21111590.00115901039987347483160114
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2317470.00747046731904687131232194
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................2014788.0047883856727332125180
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2013796.003796371712121306
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................2211627.0016271834305713476
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2211292.0012921051188786113
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2311128.00112885828463015016
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................221740.0074061295741147
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................201663.006635522451000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................211621.0062151214651110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221558.005584261416246810
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................191464.0046439402128147
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATCA.........................................................................................................................221369.003691521743491035
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................231364.00364895212221314
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................231349.0034920715111250
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATC..........................................................................................................................211340.0034040892132599
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................191259.0025925313200
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................241199.001991011223251721
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................191198.00198179000190
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATC..........................................................................................................................221111.001111472330352
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................181109.00109590202820
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................191107.001079312281
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................201104.00104180394205
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................22190.009067000230
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................22188.00888401030
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................21181.00818000010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23176.007658203103
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................20176.00766704401
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................21170.0070192108310
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18168.00685800271
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................23166.00665303613
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................21157.00575301210
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................21154.0054132162201
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................21151.0051250111500
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................22147.00473605510
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTC....................................................................................................................................................................24144.00443501233
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................20143.00434300000
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................25143.004319191004
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATCA.........................................................................................................................23140.00403011350
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................18137.00373502000
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21134.00343400000
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21132.00322500070
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATCA.........................................................................................................................21127.00271723230
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................18126.00262300030
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTTT......................................................................................................................................................................22125.00252400100
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................24124.00242101101
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTC.......................................................................................................................................................................21124.00242201100
..............................................................................................................................................................................................................TTAGGGTTGTGTCCGCAATGCCT...............................................................................................................................................23120.0020122690
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTT.............................................................................................................................19120.00200012800
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................22119.00194002130
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGCT......................................................................................................................................................................22115.0015114900
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGG........................................................................................................................................................................18115.00151400010
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGAG.......................................................................................................................................................................21114.0014600413
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATC..........................................................................................................................20113.0013302440
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATCT.........................................................................................................................22113.0013205600
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................20113.00131000021
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................24112.0012900030
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTA............................................................................................................................20112.0012304500
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTC......................................................................................................................................................................22111.0011602201
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23110.0010800020
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAT.........................................................................................................................................................................19110.0010900100
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................21110.0010400150
droGri2
ATGT-------------------------------------------GGTAAGT---AGT--T-CGTGT----------------------TGTGGCACT-----------------------TACTTG---A----GCTTGA---------------------TG-C-----GTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGA-ATTTTCCAACAAT------------------------------------------GTGCGAGTGA----AA------GTC--C-----T----TTTT-----GTTTTTTTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................22114573.0014573132141359
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2114088.0040883988100
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................2111253.001253122231
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................231553.0055353914
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGG........................................................................................................................................................................201491.0049148110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................201373.003733694
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................221143.001431367
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................22194.0094913
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................23173.0073730
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAG......................................................................................................................................................................20173.0073730
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................22161.0061592
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAG.........................................................................................................................................................................19158.0058580
........................................................................................................................................................................................CTAAGTACTAGTGCCGCA..........................................................................................................................................................................18155.0055550
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGG........................................................................................................................................................................19140.0040400
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATT..........................................................................................................................21128.0028271
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGA.......................................................................................................................................................................19126.0026260
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................21125.0025250
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................24123.0023221
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................22120.0020173
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATT..........................................................................................................................22120.0020200
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGG.....................................................................................................................................................................23120.0020200
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGAG......................................................................................................................................................................23118.0018180
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................21114.0014131
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTA.........................................................................................................................22114.0014131
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGC.....................................................................................................................................................................23112.0012102
............................................................................................................................................................................................GTACTAGTGCCGCAGGAG......................................................................................................................................................................18112.0012120
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAG......................................................................................................................................................................19111.0011101
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAT......................................................................................................................................................................21110.0010100
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................23110.001091
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGA.....................................................................................................................................................................2218.00880
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTT....................................................................................................................................................................2215.00550
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTAT...........................................................................................................................2115.00550
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................2514.00440
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGA.......................................................................................................................................................................1814.00440
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGT........................................................................................................................................................................2014.00440
.......................................................................................................................................................................................CCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2214.00440
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAA.....................................................................................................................................................................2314.00440
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTT.......................................................................................................................................................................2114.00440
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTAT...........................................................................................................................2013.00330
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTA.........................................................................................................................2313.00330
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGGG....................................................................................................................................................................2413.00330
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAA....................................................................................................................................................................2413.00330
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATT..........................................................................................................................2013.00330
...........................................................................................................................................................................................AGTACTAGTGCCGCAGGAGT.....................................................................................................................................................................2012.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGGC....................................................................................................................................................................2412.00220
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAC......................................................................................................................................................................2112.00220
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAA......................................................................................................................................................................2112.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCT..........................................................................................................................................................................1812.00220
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAG.........................................................................................................................................................................1812.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGG.......................................................................................................................................................................2112.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATC.....................................................................................................................................................................2312.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGATA.....................................................................................................................................................................2312.00220
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTG....................................................................................................................................................................2412.00211
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGCC....................................................................................................................................................................2412.00220
..........................................................................................................................................................................................AAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................2312.00211
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTT......................................................................................................................................................................2211.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCATT........................................................................................................................................................................2011.00110
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTT.........................................................................................................................2311.00110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTTT..................................................................................................................................................................2511.00110
............................................................................................................................................................................................GTACTAGTGCCGCAGGAGT.....................................................................................................................................................................1911.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGC.......................................................................................................................................................................2111.00110
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTATTA.........................................................................................................................2111.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGA........................................................................................................................................................................2011.00110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGT.......................................................................................................................................................................2011.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGTTA......................................................................................................................................................................2211.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGGC......................................................................................................................................................................2211.00110
..............................................................................................................................................................................................................TTAGGTTTGTGTCCGCAATGC.................................................................................................................................................2111.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGGGG...................................................................................................................................................................2511.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAAG.....................................................................................................................................................................2311.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTACT..................................................................................................................................................................2611.00110
..............................................................................................................................................................................................................TTAGGTTTGTGTCCGCAATGCCT...............................................................................................................................................2311.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGACC.....................................................................................................................................................................2311.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGCCC...................................................................................................................................................................2511.00110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGT........................................................................................................................................................................1911.00110
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTT...................................................................................................................................................................2411.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAC....................................................................................................................................................................2411.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGTTAGG.................................................................................................................................................................2711.00101
.........................................................................................................................................................................................TAAGTACTAGTGCCGCAGGAGTTC...................................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTTATTT.........................................................................................................................2211.00110
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCT..............................................................................................................................1811.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGACG...................................................................................................................................................................2511.00110
....................................................................................................................................................................................................................................TCCTGCTGCCCAAGTGCTTATTAA........................................................................................................................2411.00110
.............................................................................................................................................................................................TACTAGTGCCGCAGGAGT.....................................................................................................................................................................1811.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGTA......................................................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................CCTGCTGCCCAAGTGCTT.............................................................................................................................1811.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCACT........................................................................................................................................................................2011.00110
......................................................................................................................................................................................TCCTAAGTACTAGTGCCGCAGGA.......................................................................................................................................................................2311.00110
......................................................................................................................................................................................................................................CTGCTGCCCAAGTGCTTAT...........................................................................................................................1911.00110
........................................................................................................................................................................................CTAAGTACTAGTGCCGCAGGAGAG....................................................................................................................................................................2411.00110

Generated: 10/20/2015 at 06:46 PM