ID:

dse_245

 Coordinate:

scaffold_385:2930-2995 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.6 -29.1 -28.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DMRT1CLINER1-
mature
  1. scaffold_458:5497-5521 +
  2. scaffold_1805:2935-2959 +
  3. scaffold_2080:2075-2099 +
  4. scaffold_3279:2404-2428 +
  5. scaffold_3660:2462-2486 -
  6. scaffold_4292:1995-2019 +
  7. scaffold_10079:59-83 +
  8. scaffold_8:2977732-2977756 +
  9. scaffold_7:1497228-1497252 +
  10. scaffold_41:239341-239365 -
  11. scaffold_41:291217-291241 -
  12. dse_217  scaffold_41:291708-291732 -
  13. scaffold_47:25142-25166 +
  14. scaffold_86:82355-82379 +
  15. scaffold_116:29005-29029 -
  16. scaffold_152:49630-49654 +
  17. scaffold_184:9174-9198 +
  18. scaffold_276:5691-5715 +
  19. dse_245  scaffold_385:2930-2954 +
  20. scaffold_13449:851-875 +
  21. scaffold_18:537369-537393 -
  22. scaffold_711:706-730 -
  23. scaffold_111:63570-63594 -
  24. scaffold_518:6185-6209 -
  25. scaffold_4961:1004-1028 -
star

Sense Strand Reads

CTCCTCACCCCGTTATGGTTGACCTTCGTCAGAAGGTCGTCCAGGATTGCTCCCATCTCCTCGATTTCTAGCTGGGGGGTCTTGACCCGCTTTGCTAGTTGAGCTCTGGTAGGGGTGATGTCACTTCCAATGGTCTCTTGGGGGTGCCATCGCTCAGGTTTTGGGG
***********************************..........((((((((.(((..(((((...(((((.((.((((....)))).))..))))))))))....))).))))))))............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
..................................................TCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 25 0 20 44.80 896 544 328 20 4
..................................................TCCCATCTCCTCGATTTCTAGCTG............................................................................................ 24 0 20 19.75 395 330 59 6 0
.........................................................................................................CTGGTAGGGGTGATGTCACTTCCAA.................................... 25 0 1 7.00 7 7 0 0 0
.........................................................................................................CTGGTAGGGGTGATGTCACTTCC...................................... 23 0 1 6.00 6 1 4 1 0
..................................................TCCCATCTCCTCGATTTCTAGCT............................................................................................. 23 0 20 5.20 104 71 31 2 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGG.......................................................................................... 26 0 20 4.25 85 84 0 1 0
.........................................................................................................CTGGTAGGGGTGATGTCACTTCCA..................................... 24 0 1 4.00 4 0 4 0 0
.............................................................................................................TAGGGGTGATGTCACTTCCAATGGTC............................... 26 0 1 2.00 2 0 2 0 0
.............................................................................................................TAGGGGTGATGTCACTTCCAATGGTCTC............................. 28 0 1 2.00 2 2 0 0 0
............................................................................................TGCTAGTTGAGCTCTGGTAGGGGTGA................................................ 26 0 1 2.00 2 1 0 1 0
....TCACCCCGTTATGGTTGACCTTCGTC........................................................................................................................................ 26 0 16 1.56 25 20 4 0 1
.................................................CTCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 26 0 20 1.50 30 15 14 1 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGGG......................................................................................... 27 0 20 1.20 24 24 0 0 0
..........................................................................................................TGGTAGGGGTGATGTCACTTCCAATA.................................. 26 1 1 1.00 1 1 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCTGG........................................................................................... 24 0 20 1.00 20 19 1 0 0
...............................................................................................TAGTTGAGCTCTGGTAGGGGT.................................................. 21 0 1 1.00 1 0 1 0 0
.........................................................................................................CTGGTAGGGGTGATGTCACTT........................................ 21 0 1 1.00 1 0 1 0 0
...........................................................................................................GGTAGGGGTGATGTCACTTCC...................................... 21 0 1 1.00 1 0 1 0 0
..........................................................................................................TGGTAGGGGTGATGTCACTTCCA..................................... 23 0 1 1.00 1 1 0 0 0
..........................................................................................................TGGTAGGGGTGATGTCACTTCCAATGG................................. 27 0 1 1.00 1 1 0 0 0
..........................................................................................................TGGTAGGGGTGATGTCACTTCC...................................... 22 0 1 1.00 1 1 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCTG............................................................................................ 23 0 20 0.95 19 19 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGC.............................................................................................. 22 0 20 0.90 18 18 0 0 0
.............TATGGTTGACCTTCGTCAGAAGGTCGTC............................................................................................................................. 28 0 16 0.88 14 1 12 1 0
.................................................CTCCCATCTCCTCGATTTCTAGCTG............................................................................................ 25 0 20 0.85 17 13 4 0 0
..................................................................................................................GTGATGTCACTTCCAATGGTCTCTT........................... 25 0 4 0.75 3 3 0 0 0
..................................................................................................................GTGATGTCACTTCCAATGGTCTCTTG.......................... 26 0 4 0.75 3 3 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGGGG........................................................................................ 28 0 20 0.70 14 14 0 0 0
....................................................................................ACCCGCTTTGCTAGTTGAGCTCTGG......................................................... 25 0 20 0.65 13 9 4 0 0
....TCACCCCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 29 0 16 0.63 10 10 0 0 0
..................................................................................................................GTGATGTCACTTCCAATGGTCTCT............................ 24 0 5 0.60 3 3 0 0 0
....TCACCCCGTTATGGTTGACCTTCGT......................................................................................................................................... 25 0 16 0.56 9 8 1 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCTCTGG......................................................... 28 0 20 0.55 11 11 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCTC............................................................ 25 0 20 0.50 10 8 2 0 0
........................TTCGTCAGAAGGTCGTCCAGGATTGC.................................................................................................................... 26 0 20 0.45 9 3 4 2 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGC............. 23 0 20 0.45 9 6 2 1 0
.......CCCCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 26 0 16 0.44 7 4 3 0 0
..........CGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 23 0 17 0.41 7 4 3 0 0
..................................................................................................................GTGATGTCACTTCCAATGGTCTC............................. 23 0 5 0.40 2 1 1 0 0
..........CGTTATGGTTGACCTTCGTCAGAAGG.................................................................................................................................. 26 0 15 0.40 6 3 3 0 0
.................................................................................................................GGTGATGTCACTTCCAATGGTCTCT............................ 25 0 5 0.40 2 2 0 0 0
................................................................TTTCTAGCTGGGGGGTCTTGACCCGC............................................................................ 26 0 11 0.36 4 2 1 1 0
........................TTCGTCAGAAGGTCGTCCAGGATTG..................................................................................................................... 25 0 20 0.35 7 2 4 1 0
....................................................CCATCTCCTCGATTTCTAGCTGG........................................................................................... 23 0 20 0.35 7 3 3 1 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGCTCA.......... 26 0 15 0.33 5 3 2 0 0
..........................................................................................TTTGCTAGTTGAGCTCTGGTAGGGG................................................... 25 0 20 0.30 6 1 3 2 0
.........................TCGTCAGAAGGTCGTCCAGGATTGC.................................................................................................................... 25 0 20 0.30 6 2 4 0 0
.................................................CTCCCATCTCCTCGATTTCTAGCT............................................................................................. 24 0 20 0.30 6 2 4 0 0
..................................................TCCCATCTCCTCGATTTCTAG............................................................................................... 21 0 20 0.30 6 4 2 0 0
.............TATGGTTGACCTTCGTCAGAAGGT................................................................................................................................. 24 0 17 0.29 5 2 3 0 0
................................................................................................................GGGTGATGTCACTTCCAATGGTCTCTT........................... 27 0 4 0.25 1 1 0 0 0
......................................................................................................................TGTCACTTCCAATGGTCTCTTGGGG....................... 25 0 4 0.25 1 0 1 0 0
......ACCCCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 27 0 16 0.25 4 3 1 0 0
..................................................................................................................GTGATGTCACTTCCAATGGTCTCTTGG......................... 27 0 4 0.25 1 1 0 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAGCTCTGG......................................................... 27 0 20 0.25 5 5 0 0 0
..................................................TCCCATCTCCTCGATTTC.................................................................................................. 18 0 20 0.25 5 5 0 0 0
..............................AGAAGGTCGTCCAGGATTGCTCCCATC............................................................................................................. 27 0 20 0.25 5 0 4 1 0
..............ATGGTTGACCTTCGTCAGAAGGTCGTC............................................................................................................................. 27 0 16 0.25 4 0 4 0 0
..................................................TCCCATCTCCTCGATTTCTATCTGG........................................................................................... 25 1 20 0.25 5 5 0 0 0
...............................................TGCTCCCATCTCCTCGATTTCTAGC.............................................................................................. 25 0 20 0.25 5 5 0 0 0
......................................................................................................................TGTCACTTCCAATGGTCTCTTGG......................... 23 0 4 0.25 1 1 0 0 0
......................................................................................................................TGTCACTTCCAATGGTCTCTTGGG........................ 24 0 4 0.25 1 0 0 1 0
.................................................................................................................GGTGATGTCACTTCCAATGGTCTCTT........................... 26 0 4 0.25 1 1 0 0 0
..............................................TTGCTCCCATCTCCTCGATTTCTAGC.............................................................................................. 26 0 20 0.25 5 4 1 0 0
...................................................................................................................TGATGTCACTTCCAATGGTCTCTTG.......................... 25 0 4 0.25 1 1 0 0 0
................................................................................................................GGGTGATGTCACTTCCAATGGTCTC............................. 25 0 4 0.25 1 1 0 0 0
....TCACCCCGTTATGGTTGACCTTCG.......................................................................................................................................... 24 0 17 0.24 4 0 4 0 0
...............TGGTTGACCTTCGTCAGAAGGTCGTC............................................................................................................................. 26 0 18 0.22 4 0 4 0 0
.TCCTCACCCCGTTATGGTTGACCTT............................................................................................................................................ 25 0 18 0.22 4 4 0 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAGCTC............................................................ 24 0 20 0.20 4 2 2 0 0
..................................................TCCCATATCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.20 4 4 0 0 0
............................................................................................TGCTAGTTGAGCTCTGGTAGGG.................................................... 22 0 20 0.20 4 3 1 0 0
....................................................................................ACCCGCTTTGCTAGTTGAGCTCTGGT........................................................ 26 0 20 0.20 4 3 1 0 0
...................................................................................................................TGATGTCACTTCCAATGTTCTCT............................ 23 1 5 0.20 1 1 0 0 0
...............................................TGCTCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 28 0 20 0.20 4 3 1 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCTCT........................................................... 26 0 20 0.20 4 4 0 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGCT............ 24 0 20 0.20 4 0 4 0 0
.................................................................................................................GGTGATGTCACTTCCAATGGTCT.............................. 23 0 5 0.20 1 0 1 0 0
..........CGTTATGGTTGACCTTCGTCAGAAGGT................................................................................................................................. 27 0 15 0.20 3 3 0 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAGCTCTG.......................................................... 26 0 20 0.20 4 2 2 0 0
........CCCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 25 0 16 0.19 3 2 1 0 0
..........CGTTATGGTTGACCTTCGTCAGAA.................................................................................................................................... 24 0 16 0.19 3 0 3 0 0
.............TATGGTTGACCTTCGTCAGAAGG.................................................................................................................................. 23 0 17 0.18 3 0 2 1 0
...........................................................................GGGGTCTTGACCCGCTTTGCTAGTTG................................................................. 26 0 17 0.18 3 3 0 0 0
................................................................................................................................................TGCCATCGCTCAGGTTTTGGGG 22 0 17 0.18 3 0 3 0 0
.....................................................CATCTCCTCGATTTCTAGCTGG........................................................................................... 22 0 20 0.15 3 3 0 0 0
..................................................TCCCATCTCCTCGATTTCTATCTG............................................................................................ 24 1 20 0.15 3 3 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGGGGG....................................................................................... 29 0 20 0.15 3 3 0 0 0
.................................................CTCCCATCTCCTCGATTTCTAG............................................................................................... 22 0 20 0.15 3 1 2 0 0
............................................................................................TGCTAGTTGAGCTCTGGTAGGGG................................................... 23 0 20 0.15 3 3 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCT............................................................. 24 0 20 0.15 3 2 1 0 0
..................................................TCCCATCTACTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.15 3 3 0 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCG.............. 22 0 20 0.15 3 3 0 0 0
..................................................TCTCATCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.15 3 1 2 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGC.......................................................................................... 26 1 20 0.15 3 3 0 0 0
.....................................................CATCTCCTCGATTTCTAGCTGGGG......................................................................................... 24 0 20 0.15 3 3 0 0 0
.....................................................CATCTCCTCGATTTCTAGCTG............................................................................................ 21 0 20 0.15 3 2 1 0 0
.......................................................................................................................................TCTTGGGGGTGCCATCGCTCAGG........ 23 0 15 0.13 2 1 1 0 0
.......................................................................................................................................TCTTGGGGGTGCCATCGCTCAGGT....... 24 0 15 0.13 2 1 1 0 0
..........CGTTATGGTTGACCTTCGTCAGAAG................................................................................................................................... 25 0 16 0.13 2 1 1 0 0
.....CACCCCGTTATGGTTGACCTTCGTC........................................................................................................................................ 25 0 16 0.13 2 2 0 0 0
.............TATGGTTGACCTTCGTCAGAAGGTCG............................................................................................................................... 26 0 17 0.12 2 0 1 1 0
.........CCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 24 0 17 0.12 2 2 0 0 0
...........TTAATGGTTGACCTTCGTCAGAAGGGC................................................................................................................................ 27 3 17 0.12 2 0 2 0 0
........................................................................................................................................CTTGGAAGGGCCATCGCTCA.......... 20 3 17 0.12 2 2 0 0 0
..........CGTTATGGTTGACCTTCGTCA....................................................................................................................................... 21 0 17 0.12 2 0 2 0 0
.TCCTCACCCCGTTATGGTTGACCT............................................................................................................................................. 24 0 18 0.11 2 2 0 0 0
..................................................TCCAATCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.10 2 2 0 0 0
..................................................CCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.10 2 0 2 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGCTC........... 25 0 20 0.10 2 1 0 1 0
..................................................TCCAATCTCCTCGATTTATAGCTGG........................................................................................... 25 2 20 0.10 2 2 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCTCTG.......................................................... 27 0 20 0.10 2 0 1 1 0
.........................TCGTCAGAAGGTCGTCCAGGATTGCTCC................................................................................................................. 28 0 20 0.10 2 2 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCTGGG.......................................................................................... 25 0 20 0.10 2 2 0 0 0
..................................................TCCCATCTCCTCGATCTCTAGCTGG........................................................................................... 25 1 20 0.10 2 1 1 0 0
..................................................TCCTATCTCCTCGATTTCTAGCTG............................................................................................ 24 1 20 0.10 2 0 2 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAG............................................................... 21 0 20 0.10 2 1 1 0 0
...............................................TGCTCCCATCTCCTCGATTTCTAGCT............................................................................................. 26 0 20 0.10 2 1 1 0 0
........................TTCGTCAGAAGGTCGTCCAGG......................................................................................................................... 21 0 20 0.10 2 0 2 0 0
..........................CGTCAGAAGGTCGTCCAGGATTGCTC.................................................................................................................. 26 0 20 0.10 2 1 1 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAGCTCTGGT........................................................ 28 0 20 0.10 2 2 0 0 0
...........................................................................................TTGCTAGTTGAGCTCTGGTAGGGG................................................... 24 0 20 0.10 2 0 1 1 0
..........................................................................................TTTGCTAGTTGAGCTCTGGTAGG..................................................... 23 0 20 0.10 2 0 2 0 0
..................................................GCCCATCTCCTCGATTTCTAGCTG............................................................................................ 24 1 20 0.10 2 2 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGT........................................................................................... 25 1 20 0.10 2 2 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCT............................................................................................. 22 0 20 0.10 2 2 0 0 0
.................................AGGTCGTCCAGGATTGCTCCCATCTC........................................................................................................... 26 0 20 0.10 2 2 0 0 0
..............................AGAAGGTCGTCCAGGATTGCTCCC................................................................................................................ 24 0 20 0.10 2 0 2 0 0
..................................................TGCCATCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.10 2 2 0 0 0
................................................................TTTCTAGCTGGGGGGTCTTGACCCGCTT.......................................................................... 28 0 11 0.09 1 1 0 0 0
....................................................................TAGCTGGGGGGTCTTGACCCGC............................................................................ 22 0 11 0.09 1 1 0 0 0
................................................................TTTCTAGCTGGGGGGTCTTGACCCGCT........................................................................... 27 0 11 0.09 1 0 1 0 0
............................................................................................................................TTCCAATGGTCTCTTGGGGGTGCCATC............... 27 0 13 0.08 1 1 0 0 0
..........................................................................GGGGGTCTTGACCCGCTTTGCTAGT................................................................... 25 0 13 0.08 1 1 0 0 0
..........................................................................GGGGCTCTTGACCCGCTTTGCTAGT................................................................... 25 1 14 0.07 1 1 0 0 0
............................................................TCGATTTCTAGCTGGGGGGTCTTGA................................................................................. 25 0 14 0.07 1 0 1 0 0
...........................................................................................................................................GGGGGTGCCATCTCTCAGGTTTTGGG. 26 1 14 0.07 1 1 0 0 0
.................................................................................................................GGTGATGTCCCTTCCAATGGTCTCT............................ 25 1 14 0.07 1 1 0 0 0
.........................................................TCCTCGATTTCTAGCTGGGGGGTCTTG.................................................................................. 27 0 14 0.07 1 1 0 0 0
...........................................................CTCGATTTCTAGCTGGGGGGTCTTGAA................................................................................ 27 1 14 0.07 1 1 0 0 0
................................................................TTTCTAGCTGGGGGGTCTTGA................................................................................. 21 0 14 0.07 1 1 0 0 0
.......................................................................................................................................TCTTGGGGGTGCCATCGCTCAGGTT...... 25 0 14 0.07 1 1 0 0 0
........................................................................................................................................CTTGGGGGTGCCATCGCTCAGGTT...... 24 0 14 0.07 1 0 1 0 0
..............................................................................................................................................GGTGCCATCGCTCAGGTTTTGGGG 24 0 15 0.07 1 1 0 0 0
............................................................................................................................TTCCAATGGTCTCTTGGGGGTGCCAT................ 26 0 15 0.07 1 0 1 0 0
......ACCCCGTTATGGTTGACCTTCGTCAGAA.................................................................................................................................... 28 0 15 0.07 1 1 0 0 0
........................................................................................................................................CTTGGGGGTGCCATCGCTCA.......... 20 0 15 0.07 1 1 0 0 0
............................................................................................................................TTCCAATGGTCTCTTGGGGGTGCCA................. 25 0 15 0.07 1 1 0 0 0
...............................................................................................................................................GTGCCATCGCTCAGGTTTTGGGG 23 0 15 0.07 1 1 0 0 0
.......CCCCGTTATGGTTGACCTTCGTCAGAAG................................................................................................................................... 28 0 15 0.07 1 1 0 0 0
..........CGTTATGGTTGACCTTCGTCAGAAGGA................................................................................................................................. 27 1 15 0.07 1 0 1 0 0
.....................................................................................................................................TCTCTTGGGGGTGCCATCGCTCAGGT....... 26 0 15 0.07 1 0 1 0 0
.............................................................................................................................................GGGTGCCATCGCTCAGGTTTTGGGG 25 0 15 0.07 1 1 0 0 0
........CCCGTTATGGTTGACCTTCGTCAGAAG................................................................................................................................... 27 0 15 0.07 1 1 0 0 0
....TCACCCCGTTATGGTTGACCTTCGTCA....................................................................................................................................... 27 0 16 0.06 1 1 0 0 0
....TCACCCCATTATGGTTGACCTTCGTC........................................................................................................................................ 26 1 16 0.06 1 1 0 0 0
......ACCCCGTTATGGTTGACCTTCGTCAGC..................................................................................................................................... 27 1 16 0.06 1 1 0 0 0
....TCACCCCGTTATGGTTGACCTTCGTCATA..................................................................................................................................... 29 1 16 0.06 1 1 0 0 0
.....CACCCCGCTATGGTTGACCTTCGTC........................................................................................................................................ 25 1 16 0.06 1 1 0 0 0
...CTCACCCCGTTATGGTTGACCTTCGT......................................................................................................................................... 26 0 16 0.06 1 1 0 0 0
....TCACCCCTTAATGGTTGACCTTCGTC........................................................................................................................................ 26 2 16 0.06 1 1 0 0 0
.TCCTCACCCCGTTATGGTTGACCTTCGT......................................................................................................................................... 28 0 16 0.06 1 1 0 0 0
....TCACCCCGTTATGGTTGACCTTCGTCAG...................................................................................................................................... 28 0 16 0.06 1 1 0 0 0
.....CACCCCGTTATGGTTGACCTTCGTCAGA..................................................................................................................................... 28 0 16 0.06 1 1 0 0 0
...CTCACCCCGTTATGGTTGACCTTCGTC........................................................................................................................................ 27 0 16 0.06 1 0 0 1 0
..............ATGGTTGACCTTCGTCAGAAGGTTGTC............................................................................................................................. 27 1 16 0.06 1 0 1 0 0
.........CCGTTATGGTTGACCTTCGTCAGAAG................................................................................................................................... 26 0 16 0.06 1 1 0 0 0
.......................................................................................................................................TCGTGGGTGGGCCATCGCTCA.......... 21 3 16 0.06 1 1 0 0 0
......ACCCCGTTATGGTTGACCTTCGTC........................................................................................................................................ 24 0 16 0.06 1 1 0 0 0
...........TTAATGGTTGACCTTCGTCAGAAGGGCG............................................................................................................................... 28 3 17 0.06 1 1 0 0 0
............TTATGGTTGACCTTCGTCAGAAGG.................................................................................................................................. 24 0 17 0.06 1 1 0 0 0
...........GTTATGGTTGACCTTCGTCAGAAGG.................................................................................................................................. 25 0 17 0.06 1 0 1 0 0
....TCACCCCGTTATGGTTGACCTTCTT......................................................................................................................................... 25 1 17 0.06 1 1 0 0 0
................................................................................................................................................TGCCATCGCTCAGGTTTTGGG. 21 0 17 0.06 1 0 1 0 0
.............TATGGTTGACCTTCGTCAGAAGGTCGT.............................................................................................................................. 27 0 17 0.06 1 0 1 0 0
.........CCGTTATGGTTGACCTTCGTCAG...................................................................................................................................... 23 0 17 0.06 1 1 0 0 0
......ACCCCGTTATGGTTGACCTTCG.......................................................................................................................................... 22 0 17 0.06 1 0 1 0 0
............TAATGGTTGACCTTCGTCAGAAGGGC................................................................................................................................ 26 2 17 0.06 1 0 1 0 0
............TTATGGTTGACCTTCGTCAGAAGGT................................................................................................................................. 25 0 17 0.06 1 1 0 0 0
...............TGGTTGACTTTCGTCAGAAGGTCGTC............................................................................................................................. 26 1 18 0.06 1 0 1 0 0
........CCCGTTATGGTTTACCTTCGTCAGA..................................................................................................................................... 25 1 18 0.06 1 1 0 0 0
....TCACCCCGTTATGGTTGACCTTC........................................................................................................................................... 23 0 18 0.06 1 1 0 0 0
...............TGGTTGACCTTCGTCAGAAGGTCGTCC............................................................................................................................ 27 0 18 0.06 1 1 0 0 0
..............................................................................GTCTTGACCCGCTTTGCTAGTTGA................................................................ 24 0 19 0.05 1 1 0 0 0
...........................................................CTCGATTTCTAGCTGGGGGGTC..................................................................................... 22 0 19 0.05 1 1 0 0 0
..............................................................................GTCTTGACCCGCTTTGCTAGTTGAGCTC............................................................ 28 0 19 0.05 1 1 0 0 0
............TTATGGTTGACCTTCGTCAGA..................................................................................................................................... 21 0 19 0.05 1 1 0 0 0
............................................................TCGATTTCTAGCTGGGGGGTCT.................................................................................... 22 0 19 0.05 1 0 1 0 0
..............................................................................GTCTTGACCCGCTTTGCTAGTTGAGC.............................................................. 26 0 19 0.05 1 1 0 0 0
.........................................................TCCTCGATTTCTAGCTGGGGGGTCTT................................................................................... 26 0 19 0.05 1 0 1 0 0
..................................................TCCCATCTCCTCGATTTATAGCTGG........................................................................................... 25 1 20 0.05 1 1 0 0 0
......................................................ATCTCCTCGATTTCTAGCTGGGG......................................................................................... 23 0 20 0.05 1 1 0 0 0
.................................................ATCCCATCTCCTCGATTTCTAGCGG............................................................................................ 25 2 20 0.05 1 1 0 0 0
.........................................................TCCTCGATTTCTAGCTGG........................................................................................... 18 0 20 0.05 1 0 1 0 0
..................................................TCCCACCTCCTCGATTTCTAGCT............................................................................................. 23 1 20 0.05 1 1 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAA............................................................... 22 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCCCGATTTCTAGCTGG........................................................................................... 25 1 20 0.05 1 0 1 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGAT............ 24 1 20 0.05 1 0 0 1 0
.....................................................................................CCCGCTTTGCTAGTTGAGCTCTG.......................................................... 23 0 20 0.05 1 1 0 0 0
.........................TCGTCAGAAGGTCGTCCAGGATTG..................................................................................................................... 24 0 20 0.05 1 1 0 0 0
............................TCAGAAGGTCGTCCAGGATTG..................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGATT.............................................................. 23 2 20 0.05 1 1 0 0 0
...................................................CGCATCTCCTCGATTTCTAGCTGG........................................................................................... 24 1 20 0.05 1 1 0 0 0
...............................................................................TCTTGACCCGCTTTGCTAGTTGA................................................................ 23 0 20 0.05 1 0 1 0 0
.....................ACCTTCGTCAGAAGGTCGTCCAGGATTGC.................................................................................................................... 29 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTATCTGGG.......................................................................................... 26 1 20 0.05 1 1 0 0 0
..................................................TCCCATATCCTCGATTTCTAGCTGGG.......................................................................................... 26 1 20 0.05 1 1 0 0 0
...........................................................................................TTGCTAGTTGAGCTCTGGTAGGG.................................................... 23 0 20 0.05 1 0 1 0 0
..................................................TCCCATCTCCTCGATTTCTACCTGG........................................................................................... 25 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCGGGG.......................................................................................... 26 1 20 0.05 1 1 0 0 0
..........................................................................................TTTGCTAGTTGAGCTCTGGTAGGG.................................................... 24 0 20 0.05 1 0 1 0 0
................................................GCTCCCATCTCCTCGATTTCTAGCTG............................................................................................ 26 0 20 0.05 1 1 0 0 0
........................TTCGTCAGAAGGTCGTCCAGGATTGAAA.................................................................................................................. 28 3 20 0.05 1 1 0 0 0
.................................AGGTCGTCCAGGATTGCTCCCATCT............................................................................................................ 25 0 20 0.05 1 1 0 0 0
..................................................TCCAATCTCCTCTATTTATAGCT............................................................................................. 23 3 20 0.05 1 1 0 0 0
...............................................................................TCTTGACCCGCTTTGCTAGTTGAGC.............................................................. 25 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAACTGG........................................................................................... 25 1 20 0.05 1 0 1 0 0
...............................................................................TCTTGACCCGCTTTGCTAGTTGAGCT............................................................. 26 0 20 0.05 1 1 0 0 0
..........................................................................................................................................TGGAAGGGCCATCGCTCAG......... 19 3 20 0.05 1 1 0 0 0
..................................................TCCCATCTACTCGATTTCTAGCTGGGG......................................................................................... 27 1 20 0.05 1 1 0 0 0
.............................CAGAAGGTCGTCCAGGATTGCTCCCATC............................................................................................................. 28 0 20 0.05 1 0 1 0 0
..................................................TCCCGTCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.05 1 0 1 0 0
.....................................................CATATCCTCGATTTCTAGCTGGGG......................................................................................... 24 1 20 0.05 1 1 0 0 0
.......................................................................................CGCTTTGCTAGTTGAGCTCTG.......................................................... 21 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGA.......................................................................................... 26 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGGGGT........................................................................................ 28 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCAATTTCTAGCTGG........................................................................................... 25 1 20 0.05 1 1 0 0 0
........................................................................................GCTTTGCTAGTTGAGCTCTGGTAGGGG................................................... 27 0 20 0.05 1 1 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGCTG............................................................ 25 1 20 0.05 1 0 1 0 0
..................................................TGCCATCTCCTCGATTTCTAGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
......................................................ATCTCCTCGATTTCTAGCAGG........................................................................................... 21 1 20 0.05 1 0 0 0 1
........................................CCAGGATTGCTCCCATCTCCTCGATTT................................................................................................... 27 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTCCTAGCTGGG.......................................................................................... 26 1 20 0.05 1 1 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGC.............................................................. 23 0 20 0.05 1 0 1 0 0
..................................................TCCCATCTCCTCGATTTCGAGCTGG........................................................................................... 25 1 20 0.05 1 1 0 0 0
............................TCAGAAGGTCGTCTAGGATT...................................................................................................................... 20 1 20 0.05 1 0 1 0 0
........................TTCGTCAGAAGGTCGTCCAGGATTGCTC.................................................................................................................. 28 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATGTCTAGCTGGG.......................................................................................... 26 1 20 0.05 1 1 0 0 0
..................................................TTCCATCTCCTCGATTTCTAGCTGGGGG........................................................................................ 28 1 20 0.05 1 1 0 0 0
.......................................................................................CGCTTTGCTAGTTGAGCTCTGGTA....................................................... 24 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCTATTTCTAGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
...............................GAAGGTCGTCCAGGATTGCTCCCATC............................................................................................................. 26 0 20 0.05 1 1 0 0 0
.................................................................................TTGACCCGCTTTGCTAGTTGAGT.............................................................. 23 1 20 0.05 1 0 0 1 0
..............................................TTGCTCCCATCTCCTCGATTTCTAGCT............................................................................................. 27 0 20 0.05 1 1 0 0 0
............................................................................................TGCTAGTTGAGCTCTGGTA....................................................... 19 0 20 0.05 1 1 0 0 0
...............................................TGCTCCCATCTCCTCGATTTCTAGCTG............................................................................................ 27 0 20 0.05 1 1 0 0 0
.............................CAGAAGGGCGTCCAGGATTGCTCC................................................................................................................. 24 1 20 0.05 1 1 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCTGC........................................................................................... 24 1 20 0.05 1 1 0 0 0
.......................................TCCAGGATTGCTCCCATCTCC.......................................................................................................... 21 0 20 0.05 1 1 0 0 0
..................................................TCCCCTCTCCTCGATTTCTAGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATCGA............. 23 1 20 0.05 1 0 1 0 0
...................................................CCCATCTCCTCGATTTCTAGC.............................................................................................. 21 0 20 0.05 1 1 0 0 0
...........................................................................................TTGCTAGTTGAGCTCTGGTAGG..................................................... 22 0 20 0.05 1 1 0 0 0
.........................TCGTCAGAAGGTCGTCCAGGATTGCA................................................................................................................... 26 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTGGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
..................................................TTCCATCTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.05 1 0 1 0 0
.................................................................................TTGACCCGCTTTGCTAGTTG................................................................. 20 0 20 0.05 1 1 0 0 0
.......................CTTCGTCAGAAGGTCGTCCAGGATTGC.................................................................................................................... 27 0 20 0.05 1 1 0 0 0
......................................................ATCTCCTCGATTTCTAGCTG............................................................................................ 20 0 20 0.05 1 1 0 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCATC............... 21 0 20 0.05 1 1 0 0 0
............................................CATTGCTCCCATCTCCTCGATTTCTAGC.............................................................................................. 28 1 20 0.05 1 1 0 0 0
..................................................................................................................................TGGTCTCTTGGGGGTGCCACCGCT............ 24 1 20 0.05 1 0 1 0 0
................................................AATCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 27 2 20 0.05 1 1 0 0 0
...............................AAAGGTCGTCCAGGATTGCTCCCATC............................................................................................................. 26 1 20 0.05 1 1 0 0 0
.....................................................................................CCCGCTTTGCTAGTTGAGCTCTGGT........................................................ 25 0 20 0.05 1 0 1 0 0
...............................................TGCTCCCATCTCCTCGATTTCTA................................................................................................ 23 0 20 0.05 1 1 0 0 0
...........................................................................................TTGCTAGTTGGGCTCTGGTAGGG.................................................... 23 1 20 0.05 1 0 1 0 0
...................................................CCCATCTCCTCTATTTCTAGCTG............................................................................................ 23 1 20 0.05 1 1 0 0 0
..................................................................................TGACCCGCTTTGCTAGTTGAAA.............................................................. 22 2 20 0.05 1 0 1 0 0
........................TTCGTCAGAAGGGCGTCCAGGAT....................................................................................................................... 23 1 20 0.05 1 0 1 0 0
..............................AGAAGGTTGTCCAGGATTGCTCCCAT.............................................................................................................. 26 1 20 0.05 1 0 1 0 0
.............................CAGAAGGTCGTCCAGGATTGCTCC................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.............................................................................................GCTAGTTGAGCTCTGGTAGGGG................................................... 22 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCCAGCTGG........................................................................................... 25 1 20 0.05 1 0 1 0 0
....................................................................................ACCCGCTTTGCTAGTTGAGCTCTG.......................................................... 24 0 20 0.05 1 1 0 0 0
...............................................TGCTCCAATCTCCTCGATTTCTAGC.............................................................................................. 25 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTAGATTTCTAGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
........................TTCGTCAGAAGGTCGTCCAGGATT...................................................................................................................... 24 0 20 0.05 1 0 1 0 0
..................................................TCCCAACTCCTCGATTTCTAGCTGG........................................................................................... 25 1 20 0.05 1 1 0 0 0
....................................................................................ACCCTCTTTGCTAGTTGAGCTCTGG......................................................... 25 1 20 0.05 1 1 0 0 0
..........................TCTCAGAAGGTCGTCCAGGATTGCTT.................................................................................................................. 26 3 20 0.05 1 0 1 0 0
.................................................................................TTGCCCCGCTTTTCTAGTTGAGCTTT........................................................... 26 3 20 0.05 1 1 0 0 0
..................................................TCCCATATCCTCGATTTCTAGCTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
...................................................................................GACCCGCTTTGCTAGTTGAGCTCT........................................................... 24 0 20 0.05 1 1 0 0 0
..........................................AGGCTTGCTCCCATCTCCTCGATTTCT................................................................................................. 27 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAACTG............................................................................................ 24 1 20 0.05 1 1 0 0 0
..............................................TTGCCCCCATCTCCTCGATTTCTAGC.............................................................................................. 26 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTACCT............................................................................................. 23 1 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTAGCTGC........................................................................................... 25 1 20 0.05 1 1 0 0 0
..............................AGAAGGGCGTCCAGGATTGCTCCCAT.............................................................................................................. 26 1 20 0.05 1 1 0 0 0
................................................GCTCCCATCTCCTCGATTTCTAGCTGG........................................................................................... 27 0 20 0.05 1 1 0 0 0
.........................TCGTCAGAAGGTCGTCCAGGATT...................................................................................................................... 23 0 20 0.05 1 0 1 0 0
..................................................................................................TTGACCTCAGGTAGGAGT.................................................. 18 3 20 0.05 1 0 1 0 0
.......................................TCCAGGATTGCTCCCATCTCCTCG....................................................................................................... 24 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTACTCGATTTCTAGCTGGGGG........................................................................................ 28 1 20 0.05 1 1 0 0 0
....................................................CCATCTCCTCGATTTCTAGCTGGG.......................................................................................... 24 0 20 0.05 1 1 0 0 0
.....................................................CATCTCCTCGATTTCTAGCTGGG.......................................................................................... 23 0 20 0.05 1 1 0 0 0
..................................................TCCCATCTCCTCGATTTCTA................................................................................................ 20 0 20 0.05 1 0 0 1 0
............................TCAGAAGGGCGTCCAGGATTGCTCC................................................................................................................. 25 1 20 0.05 1 1 0 0 0
...................................................CCCATCTCCTCGATTTCTAGCTGGGG......................................................................................... 26 0 20 0.05 1 1 0 0 0
....................................................CCATCTCCTCGATTTCTAGCT............................................................................................. 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAGGAGTGGGGCAATACCAACTGGAAGCAGTCTTCCAGCAGGTCCTAACGAGGGTAGAGGAGCTAAAGATCGACCCCCCAGAACTGGGCGAAACGATCAACTCGAGACCATCCCCACTACAGTGAAGGTTACCAGAGAACCCCCACGGTAGCGAGTCCAAAACCCC
***********************************..........((((((((.(((..(((((...(((((.((.((((....)))).))..))))))))))....))).))))))))............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
..................................................................................................AACTCGAGACCATCCCCACTACAGT........................................... 25 0 1 3.00 3 3 0 0 0
.................................................................................................CAACTCGAGACCATCCCCACTACAGT........................................... 26 0 1 2.00 2 2 0 0 0
..................................................................................................AACTCGAGACCATCCCCACTACAGTG.......................................... 26 0 1 2.00 2 2 0 0 0
...................................................................................................ACTCGAGACCATCCCCACTACAGTG.......................................... 25 0 1 2.00 2 1 1 0 0
.................................................................................................CAACTCGAGACCATCCCCACTACAGTG.......................................... 27 0 1 2.00 2 2 0 0 0
....................................AGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 24 0 20 1.45 29 28 1 0 0
..................................CCAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 26 0 20 1.45 29 28 1 0 0
...................................CAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 25 0 20 1.00 20 20 0 0 0
...................................................................................................ACTCGAGACCATCCCCACTACAGT........................................... 24 0 1 1.00 1 1 0 0 0
....................................................................................................CTCGAGACCATCCCCACTACAGT........................................... 23 0 1 1.00 1 1 0 0 0
..................................................................................................TACTCGAGACCATCCCCACTACAGTG.......................................... 26 1 1 1.00 1 0 0 1 0
.................................................................................................CAACTCGAGACCATCCCCACTACAG............................................ 25 0 1 1.00 1 1 0 0 0
......................................................................CGACCCCCCAGAACTGGGCGAAACGAT..................................................................... 27 0 11 0.91 10 7 1 1 1
.......GGGGCAATACCAACTGGAAGCAGTCTT.................................................................................................................................... 27 0 15 0.73 11 10 1 0 0
........................................................................................CGAAACGATCAACTCGAGACCATCCCC................................................... 27 0 20 0.70 14 12 0 2 0
.......................................................................GACCCCCCAGAACTGGGCGAAACGAT..................................................................... 26 0 11 0.45 5 5 0 0 0
.......GGGGCAATACCAACTGGAAGCAGTCT..................................................................................................................................... 26 0 16 0.38 6 6 0 0 0
...................................TAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 25 1 20 0.35 7 7 0 0 0
....................................TGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 24 1 20 0.30 6 6 0 0 0
............................................................................................ACGATCAACTCGAGACCATCCCC................................................... 23 0 20 0.30 6 6 0 0 0
......................................CAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 22 0 20 0.30 6 4 1 1 0
.................................TCCAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 27 0 20 0.30 6 6 0 0 0
.................................................................................................................................TACCAGAGAACCCCCACGGTAGCGAGT.......... 27 0 13 0.23 3 0 3 0 0
.........................................................................................GAAACGATCAACTCGAGACCATCCCC................................................... 26 0 20 0.20 4 3 1 0 0
...........................................................................................AACGATCAACTCGAGACCATCCCC................................................... 24 0 20 0.20 4 4 0 0 0
...................................CAGCAGGTCCTAACGAGGGTAGAG........................................................................................................... 24 0 20 0.20 4 4 0 0 0
....AGTGGGGCAATACCAACTGGAAGCAGT....................................................................................................................................... 27 0 16 0.19 3 1 2 0 0
........................................................................................CGAAACGATCAACTCGAGACCATCCC.................................................... 26 0 20 0.15 3 2 0 1 0
.............................................................................................................................................CACACGGTAGCGGGTCCATA..... 20 3 20 0.15 3 0 0 2 1
.......................................................................................GCGAAACGATCAACTCGAGACCATCCCC................................................... 28 0 20 0.15 3 3 0 0 0
....................................AGCAGGTCCTAACGAGGGTAGAG........................................................................................................... 23 0 20 0.15 3 3 0 0 0
....................................................................................TGGGCGAAACGATCAACTCGAGACCAT....................................................... 27 0 20 0.15 3 2 1 0 0
......TGGGGCAATACCAACTGGAAGCAGTCTT.................................................................................................................................... 28 0 15 0.13 2 2 0 0 0
................................................................................................................................TTACCAGAGAACCCCCACGGTAGCGA............ 26 0 18 0.11 2 0 2 0 0
.............................................................................................................................TGGTTACCAGAGAACCCCCACGGT................. 24 1 18 0.11 2 0 2 0 0
..............................................................................CAGAACTGGGCGAAACGATCAACT................................................................ 24 0 19 0.11 2 2 0 0 0
....................................TTCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 24 2 20 0.10 2 2 0 0 0
.......................................AGGTCCTAACGAGGGTAGAGG.......................................................................................................... 21 0 20 0.10 2 2 0 0 0
.............................................TAACGAGGGTAGAGGAGCTAAAGAT................................................................................................ 25 0 20 0.10 2 2 0 0 0
.......................................................................................GCGAAACGATCAACTCGAGACCATCC..................................................... 26 0 20 0.10 2 0 0 1 1
..........................................................................................AAACGATCAACTCGAGACCATCCCC................................................... 25 0 20 0.10 2 2 0 0 0
...........................................CCTAACGAGGGTAGAGGAGCTAAAGAT................................................................................................ 27 0 20 0.10 2 0 2 0 0
..................................CCAGCAGGTCCTAACGAGGTTAGAGG.......................................................................................................... 26 1 20 0.10 2 2 0 0 0
.......................................................................GACCCCCCAGAACTGGGCGAAACGATCA................................................................... 28 0 11 0.09 1 1 0 0 0
......................................................................CCACCCCCCAGAACTGGGCGAAACGAT..................................................................... 27 1 11 0.09 1 0 0 1 0
......................................................................CGACCCCCCAGAACTGGGCGAAACGA...................................................................... 26 0 11 0.09 1 1 0 0 0
........................................................................ACCCCCCAGAACTGGGCGAAACGAT..................................................................... 25 0 12 0.08 1 1 0 0 0
................................................................................................................................TTACCAGAGAACCCCCACGGTAGCGAGT.......... 28 0 13 0.08 1 1 0 0 0
.................................................................................................................................TATCAGAGAACCCCCACGGTAGCGAGT.......... 27 1 13 0.08 1 1 0 0 0
..........................................................................CCCCCAGAACTGGGCGAAACGAT..................................................................... 23 0 13 0.08 1 1 0 0 0
.......................................................................................................................................AGAACCCCCACGTTAGCGAGTCCAAAA.... 27 1 14 0.07 1 1 0 0 0
.......................................................................................................................................AGAACCCCCACGGTAGCGAGTCCAAAA.... 27 0 14 0.07 1 1 0 0 0
............................................................................................................................................CCCCACGGTAGCGAGTCCAAAACCC. 25 0 14 0.07 1 1 0 0 0
..............................................................CTAAAGATCGACCCCCCAGAAC.................................................................................. 22 0 14 0.07 1 1 0 0 0
............................................................AGCTAAAGATCGACCCCCCAGAACT................................................................................. 25 0 14 0.07 1 1 0 0 0
...........................................................................................................................................CCCCCACGGTAGCGAGTCCAAAACCC. 26 0 14 0.07 1 1 0 0 0
...........................................................................................................................................CCCCCACGGTAGCGAGTCCAACACC.. 25 1 14 0.07 1 1 0 0 0
............................................................................................................................................CCACACGGTAGCGGGTCCATA..... 21 3 15 0.07 1 0 0 0 1
....................................................................................................................................CAGAGAACCCCCACGGTAGCGAGT.......... 24 0 15 0.07 1 1 0 0 0
........GGGCAATACCAACTGGAAGCAGTCTTC................................................................................................................................... 27 0 15 0.07 1 0 1 0 0
.......GGGGCAATACCAACTGGAAGCAGT....................................................................................................................................... 24 0 16 0.06 1 1 0 0 0
......TGGGGCAATACCAACTGGAAGCAGT....................................................................................................................................... 25 0 16 0.06 1 1 0 0 0
.............................................................................................................................AGGTTACCAGAGAACCCCCACGGTAG............... 26 0 16 0.06 1 1 0 0 0
.......GGGTCAATACCAACTGGAAGCAGTCT..................................................................................................................................... 26 1 16 0.06 1 1 0 0 0
......TGGGGCAATACCAACTGGAAGCAGTCT..................................................................................................................................... 27 0 16 0.06 1 1 0 0 0
.............................................................................CCAGAACTGGGCGAAACGAT..................................................................... 20 0 17 0.06 1 1 0 0 0
..GGAGTGGGGCAATACCAACTGGAAGC.......................................................................................................................................... 26 0 17 0.06 1 1 0 0 0
............................................................................CCCAGAACTGGGCGAAACGATCAACT................................................................ 26 0 17 0.06 1 1 0 0 0
.AGGAGTGGGGCAATACCAACTG............................................................................................................................................... 22 0 18 0.06 1 1 0 0 0
.............ATACCAACTGGAAGCAGTCTT.................................................................................................................................... 21 0 18 0.06 1 1 0 0 0
..GGAGTGGGGCAATACCAAC................................................................................................................................................. 19 0 19 0.05 1 0 1 0 0
................................................CGAGGGTAGAGGAGCTAAAGAT................................................................................................ 22 0 20 0.05 1 0 1 0 0
.....................................................TTAGAGGAGCTAAAGATCGACC........................................................................................... 22 1 20 0.05 1 0 1 0 0
.......................................AGGTCCTAACGAGGGTAGAG........................................................................................................... 20 0 20 0.05 1 1 0 0 0
.......................................................AGAGGAGCTAAAGATCGACCCCCC....................................................................................... 24 0 20 0.05 1 1 0 0 0
.....................................ACAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 23 1 20 0.05 1 1 0 0 0
.....................................................................................GGGCGAAACGATCAACTCGAGACCATCC..................................................... 28 0 20 0.05 1 1 0 0 0
..............................................AACGAGGGTAGAGGAGCTAAA................................................................................................... 21 0 20 0.05 1 0 1 0 0
....................................TGCAGGTCCTAACGAGGGTAGA............................................................................................................ 22 1 20 0.05 1 1 0 0 0
....................................TGCAGGTCCTAACGAGGGTAGAGGAG........................................................................................................ 26 1 20 0.05 1 1 0 0 0
.....................................GCAGGTCCTAACGAGGTTAGAG........................................................................................................... 22 1 20 0.05 1 1 0 0 0
..................................ATTGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 26 3 20 0.05 1 1 0 0 0
.....................................GCAGGTCCTAACGAGGGTAG............................................................................................................. 20 0 20 0.05 1 0 1 0 0
....................................AGCGGGTCCTAACGAGGGTAGAGG.......................................................................................................... 24 1 20 0.05 1 1 0 0 0
....................................AGCAGGTCCTAACGAGGAGAGG............................................................................................................ 22 3 20 0.05 1 1 0 0 0
.......GGGGCAATCCCAACTGGAAGCAGTCT..................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
...................................TCGCAGGTCCTAACGAGGGTAGAGC.......................................................................................................... 25 3 20 0.05 1 1 0 0 0
..................................CCAGCAGGTCCTAACGAGGGTAGAG........................................................................................................... 25 0 20 0.05 1 1 0 0 0
................................TTCCAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 28 0 20 0.05 1 1 0 0 0
.........................................GTCCTAACGAGGGTAGAGG.......................................................................................................... 19 0 20 0.05 1 1 0 0 0
.................................TCCAGCAGGTCCTAACGAGGGTAGAG........................................................................................................... 26 0 20 0.05 1 1 0 0 0
..................................CCTTCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 26 2 20 0.05 1 1 0 0 0
............................................CTAACGAGGGTAGAGGAGCTAAAGAT................................................................................................ 26 0 20 0.05 1 1 0 0 0
............................................CTAACGAGGGTAGAGGAGCTAAAGA................................................................................................. 25 0 20 0.05 1 1 0 0 0
...........................CAGTCTTCCAGCAGGTCCTAACGAGGGT............................................................................................................... 28 0 20 0.05 1 1 0 0 0
.........................................................................................GAAACGATCAACTCGAGACCATCCC.................................................... 25 0 20 0.05 1 0 1 0 0
....................................................GGTAGAGGAGCTAAAGATCGA............................................................................................. 21 0 20 0.05 1 0 1 0 0
....................................AGCAGGTCCTAACGAGGGTAGAGGAG........................................................................................................ 26 0 20 0.05 1 1 0 0 0
........................................GGTCCTAACGAGGGTAGAGGAGC....................................................................................................... 23 0 20 0.05 1 1 0 0 0
....................................................GGTAGAGGAGCTAAAGATCGAC............................................................................................ 22 0 20 0.05 1 0 1 0 0
.....................TGGAAGCAGTCTTCCAGCAGGTCCTA....................................................................................................................... 26 0 20 0.05 1 0 1 0 0
...................................CAGCAGGTCCTAACGATGGTAGAGG.......................................................................................................... 25 1 20 0.05 1 1 0 0 0
...............................................ACGAGGGTAGAGGAGCTAAAGAT................................................................................................ 23 0 20 0.05 1 0 1 0 0
........................................................................................CGAAACAATCAACTCGAGACCATCCCC................................................... 27 1 20 0.05 1 1 0 0 0
.....................TGGAAGCAGTCTTCCAGCAGGTCCT........................................................................................................................ 25 0 20 0.05 1 1 0 0 0
....................................................................................TGGGCGAAACGATCAACTCGAGACCATC...................................................... 28 0 20 0.05 1 1 0 0 0
.......................................AGGTCCTAACGAGGGTAGAGGAGCT...................................................................................................... 25 0 20 0.05 1 1 0 0 0
...................................CAGCAGGTCCTAACGAGGGTAGA............................................................................................................ 23 0 20 0.05 1 1 0 0 0
...................................................GGGTAGAGGAGCTAAAGATCGACCCC......................................................................................... 26 0 20 0.05 1 0 1 0 0
.............................GTCTTCCCGCAGGTCCTAACGAGGGT............................................................................................................... 26 1 20 0.05 1 1 0 0 0
......................................................................................GGCGAAACGATCAACTCGAGACCAT....................................................... 25 0 20 0.05 1 0 1 0 0
......................................AAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 22 1 20 0.05 1 0 1 0 0
...................................GAGCAGGTCCTAACGAGGGTAGAGG.......................................................................................................... 25 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_385:2880-3045 + dse_245 CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTGCTCCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTGACCCGCTTTGCTAGT------TGAGCTCTGGTAGG-GGTGATGTCACTTCCAATGGTCTCTTGGG----------GG-TGCCATCGCTCAGGTTTT----GGGG
droSim2 node_64526:126-292 - CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTGCACCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTGACCCGCTTTGCTAGT------TGAGCTCTGGTAGGGGGTGATGTCGCTTCCAATGGTCTCTTGGG----------GG-TGCCATCGCTCGGGTTTT----GGGG
dm3 chr3L:23422868-23423035 - CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTAATCCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTTGCCCGCTTTGCTAGT------TGAGCTCTGGTAGGGGGGGATGTCGCTTCCAATGGTCTCTTGGG----------GGGGGCCATCGCTTGGGTTCT----GGGG
droEre2 scaffold_4770:208644-208810 - CTTCTCACCCCATTATGGTTGACCTTC------GTCAAAAGGTCATCCAGAATAGCTCCCATCTCCGCGATTTCTAGCTG-----CGGGGTCTTAATCCTCTTTGCTGGC------TGAACTCTGGTAGGTGGGGAGGTAAGTTCTAAAGGCCTCTTAGG----------GG-TGTTGTCGCTTTGATTCA----GGGG
droYak3 v2_chr3h_random_002:646009-646175 - GCTCTAACGCCATTTTGATTGACCTTC------GTCAGAGGGTCGTCCAGGATGGCTCCCATCTCCTCGATTTCCATCAG-----CGGGATCTTGACCCGCTTTGCTGGT------TGGACTCTTGTATGTGGAGAGGTCTCTTCTAGTGGACTCTTGGG----------AG-TGATGTCGCCTGTCTTTG----GGGG
droEug1 scf7180000407817:5057-5116 - CTCCTCACTTGTTTCTCGTGCGTTTGC------TGGATGATGTCCTCCAATATCGCCTCTAACTCC-------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415325:638-736 - TGACGCACCTGCATGACACTCGTGAGA------TGGATGACTTCGTCGAGAAGCACTCCAATCTCCGCGAGCTGTTCCAGTCCCGTGAGCTCCTGGTCCGCTTTG----------------------------------------------------------------------------------------------
droEle1 scf7180000487126:34359-34450 - CTCCCAACTTTCTGGTCGTTGACTTTC------CCAAGAATGTCGTCCAGAATTTCTCCCAATTCCGTTACATCGCGATG-----TGGTGTTTTGGCCTTCTT------------------------------------------------------------------------------------------------
droKik1 scf7180000299658:6386-6549 - CTTCGGACTTTCTGCTCGTTAACCTTG------GCTAACAAATCGACCAGTATCAATCCCATCTCCTTGATCTGTGGCTT-----GGGCGCCTTGATCTTTTTGCGTGGG------TGGGCCGCTATGGGAACCAGGACTC------------TCTCCGAGTCTTGGCCAGT-TGCCGTGGAGCCGCCGC-----TAGG
droAna3 scaffold_12928:116845-117014 - CTTCTAACCTTATGGTCGTTTACCTTT------GCCAAAAGGTCATCCAGGATCGCGCCCATCTCAACGATGGGTGTTTG-----CGGGGTTTTGGTTTTCTTCTCTGGT------TGGGAGCTACATGGCGGGGACAACTGGTCCCGATGCCTCTTCGG----------GG-TGTGATCGCTCGCCATCTGCT-TGGG
droBip1 scf7180000396376:12334-12504 + CTTCTGACCTTTTGGTCGTTCACCTTA------GCCAAAAGGTCTTCCAGGATCGCACCCATCTCATCAATGGGGGTTTG-----CGGCATTTTTGATTTTTTCCCCGGT------TGGGAATTTCCTGGCGGAGATAGCTCGTCCCGATGCCTCTTCGG----------GG-TATGTTCGCTTGCCGTCTGCTTGGGG
dp5 Unknown_singleton_2943:5644-5805 - GACCTCTGGCCCTTCTCGTTCATCTGG------TAGAGTAGGTCGTCCAGAATTGCGCCAATCTCATCTATGTCCTGTAC-----GCGGTTCCTGCTTCGCTTGGGGGGGGTTTTTCTCCCGCTACTCGATGGTGTAGGGGGGTCCCTCGGTCTCTTCGG----------GG-TGTCAGTGCCC---------------
droPer2 scaffold_1:9314375-9314536 - GACCTCTGGCCCTTCTCGTTCATCTGG------TAGAGTAGGTCGTCCAGAATTGCGCCAATCTCATCTATGTCCTGTAC-----GCGGTTCCTGCTTCGCTTGGGGGGGGTTTTTCTCCCGCTACTCGATGGTGTAGGGGGGTCCCTCGGTCTCTTCGG----------GG-TATCAGGGCCC---------------
droVir3 scaffold_12941:142533-142628 + TGCCTCATATCTGGCTGCTTGCCATGATACATGAACAGTAGCTCGTCCAGTATCGAGCCAATCTCTTCGATCTCCT-----------GGGTATTGCCTTGCTCTTCT--------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTGCTCCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTGACCCGCTTTGCTAGT------TGAGCTCTGGTAGG-GGTGATGTCACTTCCAATGGTCTCTTGGG----------GG-TGCCATCGCTCAGGTTTT----GGGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................TCCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................252044.80896544432820
........................................................TCCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................242019.753953300596
..........................................................................................................................CTGGTAGG-GGTGATGTCACTTCCAA...................................................2517.0077000
..........................................................................................................................CTGGTAGG-GGTGATGTCACTTCC.....................................................2316.0061041
........................................................TCCCATCTCCTCGATTTCTAGCT........................................................................................................................23205.20104710312
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GG................................................................................................................26204.258584001
..........................................................................................................................CTGGTAGG-GGTGATGTCACTTCCA....................................................2414.0040040
..............................................................................................................................TAGG-GGTGATGTCACTTCCAATGGTC..............................................2612.0020020
..............................................................................................................................TAGG-GGTGATGTCACTTCCAATGGTCTC............................................2812.0022000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGG-GGTGA...............................................................2612.0021001
....TCACCCCGTTATGGTTGACCTTC------GTC...................................................................................................................................................................26161.562520140
.......................................................CTCCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................26201.5030150141
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................27201.202424000
...........................................................................................................................TGGTAGG-GGTGATGTCACTTCCAATA.................................................2611.0011000
.........................................................CCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................24201.002019010
..........................................................................................................TAGT------TGAGCTCTGGTAGG-GGT.................................................................2111.0010010
..........................................................................................................................CTGGTAGG-GGTGATGTCACTT.......................................................2111.0010010
............................................................................................................................GGTAGG-GGTGATGTCACTTCC.....................................................2111.0010010
...........................................................................................................................TGGTAGG-GGTGATGTCACTTCCA....................................................2311.0011000
...........................................................................................................................TGGTAGG-GGTGATGTCACTTCCAATGG................................................2711.0011000
...........................................................................................................................TGGTAGG-GGTGATGTCACTTCC.....................................................2211.0011000
.........................................................CCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................23200.951919000
........................................................TCCCATCTCCTCGATTTCTAGC.........................................................................................................................22200.901818000
.............TATGGTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................28160.881410121
.......................................................CTCCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................25200.851713040
....................................................................................................................................GTGATGTCACTTCCAATGGTCTCTT..........................................2540.7533000
....................................................................................................................................GTGATGTCACTTCCAATGGTCTCTTG.........................................2640.7533000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GGGG..............................................................................................................28200.701414000
...............................................................................................ACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................25200.65139040
....TCACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................29160.631010000
....................................................................................................................................GTGATGTCACTTCCAATGGTCTCT...........................................2450.6033000
....TCACCCCGTTATGGTTGACCTTC------GT....................................................................................................................................................................25160.5698010
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................28200.551111000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTC............................................................................25200.50108020
........................TTC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................26200.4593042
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGC.................23200.4596021
.......CCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................26160.4474030
..........CGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................23170.4174030
....................................................................................................................................GTGATGTCACTTCCAATGGTCTC............................................2350.4021010
..........CGTTATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................26150.4063030
...................................................................................................................................GGTGATGTCACTTCCAATGGTCTCT...........................................2550.4022000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGC..................................................................................................26110.3642011
........................TTC------GTCAGAAGGTCGTCCAGGATTG................................................................................................................................................25200.3572041
..........................................................CCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................23200.3573031
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGCTCA..............26150.3353020
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGG-GG..................................................................25200.3061032
.........................TC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................25200.3062040
.......................................................CTCCCATCTCCTCGATTTCTAGCT........................................................................................................................24200.3062040
........................................................TCCCATCTCCTCGATTTCTAG..........................................................................................................................21200.3064020
.............TATGGTTGACCTTC------GTCAGAAGGT............................................................................................................................................................24170.2952030
.................................................................................................................................G-GGTGATGTCACTTCCAATGGTCTCTT..........................................2740.2511000
........................................................................................................................................TGTCACTTCCAATGGTCTCTTGGG----------G............................2540.2510010
......ACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................27160.2543010
....................................................................................................................................GTGATGTCACTTCCAATGGTCTCTTGG........................................2740.2511000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................27200.2555000
........................................................TCCCATCTCCTCGATTTC.............................................................................................................................18200.2555000
....................................AGAAGGTCGTCCAGGATTGCTCCCATC........................................................................................................................................27200.2550041
..............ATGGTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................27160.2540040
.....................................................TGCTCCCATCTCCTCGATTTCTAGC.........................................................................................................................25200.2555000
........................................................................................................................................TGTCACTTCCAATGGTCTCTTGG........................................2340.2511000
........................................................................................................................................TGTCACTTCCAATGGTCTCTTGGG----------.............................2440.2510001
...................................................................................................................................GGTGATGTCACTTCCAATGGTCTCTT..........................................2640.2511000
....................................................TTGCTCCCATCTCCTCGATTTCTAGC.........................................................................................................................26200.2554010
.....................................................................................................................................TGATGTCACTTCCAATGGTCTCTTG.........................................2540.2511000
.................................................................................................................................G-GGTGATGTCACTTCCAATGGTCTC............................................2540.2511000
....TCACCCCGTTATGGTTGACCTTC------G.....................................................................................................................................................................24170.2440040
...............TGGTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................26180.2240040
.TCCTCACCCCGTTATGGTTGACCTT.............................................................................................................................................................................25180.2244000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTC............................................................................24200.2042020
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGG-G...................................................................22200.2043010
...............................................................................................ACCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................26200.2043010
.....................................................TGCTCCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................28200.2043010
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCT...........................................................................26200.2044000
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGCT................24200.2040040
...................................................................................................................................GGTGATGTCACTTCCAATGGTCT.............................................2350.2010010
..........CGTTATGGTTGACCTTC------GTCAGAAGGT............................................................................................................................................................27150.2033000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTG..........................................................................26200.2042020
........CCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................25160.1932010
..........CGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................24160.1930030
.............TATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................23170.1830021
......................................................................................GGGGTCTTGACCCGCTTTGCTAGT------TG.................................................................................26170.1833000
.............................................................................................................................................................................TGCCATCGCTCAGGTTTT----GGGG22170.1830030
...........................................................CATCTCCTCGATTTCTAGCTG-----G.................................................................................................................22200.1533000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GGGGG.............................................................................................................29200.1533000
.......................................................CTCCCATCTCCTCGATTTCTAG..........................................................................................................................22200.1531020
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGG-GG..................................................................23200.1533000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCT.............................................................................24200.1532010
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCG..................22200.1533000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GC................................................................................................................26200.1533000
...........................................................CATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................24200.1533000
...........................................................CATCTCCTCGATTTCTAGCTG-----..................................................................................................................21200.1532010
.........................................................................................................................................................TCTTGGG----------GG-TGCCATCGCTCAGG............23150.1321010
.........................................................................................................................................................TCTTGGG----------GG-TGCCATCGCTCAGGT...........24150.1321010
..........CGTTATGGTTGACCTTC------GTCAGAAG..............................................................................................................................................................25160.1321010
.....CACCCCGTTATGGTTGACCTTC------GTC...................................................................................................................................................................25160.1322000
.............TATGGTTGACCTTC------GTCAGAAGGTCG..........................................................................................................................................................26170.1220011
.........CCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................24170.1222000
..........CGTTATGGTTGACCTTC------GTCA..................................................................................................................................................................21170.1220020
.TCCTCACCCCGTTATGGTTGACCT..............................................................................................................................................................................24180.1122000
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGCTC...............25200.1021001
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCTG..........................................................................27200.1020011
.........................TC------GTCAGAAGGTCGTCCAGGATTGCTCC............................................................................................................................................28200.1022000
.........................................................CCCATCTCCTCGATTTCTAGCTG-----GG................................................................................................................25200.1022000
.............................................................................................TGACCCGCTTTGCTAGT------TGAG...............................................................................21200.1021010
.....................................................TGCTCCCATCTCCTCGATTTCTAGCT........................................................................................................................26200.1021010
........................TTC------GTCAGAAGGTCGTCCAGG....................................................................................................................................................21200.1020020
..........................C------GTCAGAAGGTCGTCCAGGATTGCTC.............................................................................................................................................26200.1021010
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................28200.1022000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGG-GG..................................................................24200.1020011
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGG-....................................................................23200.1020020
........................................................TCCCATCTCCTCGATTTCTAGCTG-----T.................................................................................................................25200.1022000
.........................................................CCCATCTCCTCGATTTCTAGCT........................................................................................................................22200.1022000
.......................................AGGTCGTCCAGGATTGCTCCCATCTC......................................................................................................................................26200.1022000
....................................AGAAGGTCGTCCAGGATTGCTCCC...........................................................................................................................................24200.1020020
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGCTT................................................................................................28110.0911000
..........................................................................TAGCTG-----GGGGGTCTTGACCCGC..................................................................................................22110.0911000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGCT.................................................................................................27110.0910010
..............................................................................................................................................TTCCAATGGTCTCTTGGG----------GG-TGCCATC...................27130.0811000
.....................................................................................GGGGGTCTTGACCCGCTTTGCTAGT------...................................................................................25130.0811000
..................................................................TCGATTTCTAGCTG-----GGGGGTCTTGA.......................................................................................................25140.0710010
...............................................................TCCTCGATTTCTAGCTG-----GGGGGTCTTG........................................................................................................27140.0711000
.................................................................CTCGATTTCTAGCTG-----GGGGGTCTTGAA......................................................................................................27140.0711000
......................................................................TTTCTAGCTG-----GGGGGTCTTGA.......................................................................................................21140.0711000
.........................................................................................................................................................TCTTGGG----------GG-TGCCATCGCTCAGGTT..........25140.0711000
..........................................................................................................................................................CTTGGG----------GG-TGCCATCGCTCAGGTT..........24140.0710010
..........................................................................................................................................................................GG-TGCCATCGCTCAGGTTTT----GGGG24150.0711000
..............................................................................................................................................TTCCAATGGTCTCTTGGG----------GG-TGCCAT....................26150.0710010
......ACCCCGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................28150.0711000
..........................................................................................................................................................CTTGGG----------GG-TGCCATCGCTCA..............20150.0711000
..............................................................................................................................................TTCCAATGGTCTCTTGGG----------GG-TGCCA.....................25150.0711000
...........................................................................................................................................................................G-TGCCATCGCTCAGGTTTT----GGGG23150.0711000
.......CCCCGTTATGGTTGACCTTC------GTCAGAAG..............................................................................................................................................................28150.0711000
..........CGTTATGGTTGACCTTC------GTCAGAAGGA............................................................................................................................................................27150.0710010
.......................................................................................................................................................TCTCTTGGG----------GG-TGCCATCGCTCAGGT...........26150.0710010
...............................................................................................................................................................G----------GG-TGCCATCGCTCAGGTTTT----GGGG25150.0711000
........CCCGTTATGGTTGACCTTC------GTCAGAAG..............................................................................................................................................................27150.0711000
....TCACCCCGTTATGGTTGACCTTC------GTCA..................................................................................................................................................................27160.0611000
......ACCCCGTTATGGTTGACCTTC------GTCAGC................................................................................................................................................................27160.0611000
...CTCACCCCGTTATGGTTGACCTTC------GT....................................................................................................................................................................26160.0611000
.TCCTCACCCCGTTATGGTTGACCTTC------GT....................................................................................................................................................................28160.0611000
....TCACCCCGTTATGGTTGACCTTC------GTCAG.................................................................................................................................................................28160.0611000
.....CACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................28160.0611000
...CTCACCCCGTTATGGTTGACCTTC------GTC...................................................................................................................................................................27160.0610001
.........CCGTTATGGTTGACCTTC------GTCAGAAG..............................................................................................................................................................26160.0611000
......ACCCCGTTATGGTTGACCTTC------GTC...................................................................................................................................................................24160.0611000
............TTATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................24170.0611000
...........GTTATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................25170.0610010
.............................................................................................................................................................................TGCCATCGCTCAGGTTTT----GGG.21170.0610010
.............TATGGTTGACCTTC------GTCAGAAGGTCGT.........................................................................................................................................................27170.0610010
.........CCGTTATGGTTGACCTTC------GTCAG.................................................................................................................................................................23170.0611000
......ACCCCGTTATGGTTGACCTTC------G.....................................................................................................................................................................22170.0610010
............TTATGGTTGACCTTC------GTCAGAAGGT............................................................................................................................................................25170.0611000
....TCACCCCGTTATGGTTGACCTTC------......................................................................................................................................................................23180.0611000
...............TGGTTGACCTTC------GTCAGAAGGTCGTCC.......................................................................................................................................................27180.0611000
.........................................................................................GTCTTGACCCGCTTTGCTAGT------TGA................................................................................24190.0511000
.................................................................CTCGATTTCTAGCTG-----GGGGGTC...........................................................................................................22190.0511000
.........................................................................................GTCTTGACCCGCTTTGCTAGT------TGAGCTC............................................................................28190.0511000
............TTATGGTTGACCTTC------GTCAGA................................................................................................................................................................21190.0511000
..................................................................TCGATTTCTAGCTG-----GGGGGTCT..........................................................................................................22190.0510010
.........................................................................................GTCTTGACCCGCTTTGCTAGT------TGAGC..............................................................................26190.0511000
...............................................................TCCTCGATTTCTAGCTG-----GGGGGTCTT.........................................................................................................26190.0510010
............................................................ATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................23200.0511000
...............................................................TCCTCGATTTCTAGCTG-----G.................................................................................................................18200.0510010
............................................................................................TTGACCCGCTTTGCTAGT------TGAA...............................................................................22200.0511000
................................................................................................CCCGCTTTGCTAGT------TGAGCTCTG..........................................................................23200.0511000
.........................TC------GTCAGAAGGTCGTCCAGGATTG................................................................................................................................................24200.0511000
..................................TCAGAAGGTCGTCCAGGATTG................................................................................................................................................21200.0511000
............................................................................................TTGACCCGCTTTGCTAGT------TGATT..............................................................................23200.0511000
..........................................................................................TCTTGACCCGCTTTGCTAGT------TGA................................................................................23200.0510010
.....................ACCTTC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................29200.0511000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGG-G...................................................................23200.0510010
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGG-G...................................................................24200.0510010
......................................................GCTCCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................26200.0511000
........................TTC------GTCAGAAGGTCGTCCAGGATTGAAA.............................................................................................................................................28200.0511000
.......................................AGGTCGTCCAGGATTGCTCCCATCT.......................................................................................................................................25200.0511000
..........................................................................................TCTTGACCCGCTTTGCTAGT------TGAGC..............................................................................25200.0511000
..........................................................................................TCTTGACCCGCTTTGCTAGT------TGAGCT.............................................................................26200.0511000
...................................CAGAAGGTCGTCCAGGATTGCTCCCATC........................................................................................................................................28200.0510010
..................................................................................................CGCTTTGCTAGT------TGAGCTCTG..........................................................................21200.0511000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GA................................................................................................................26200.0511000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----GGGT..............................................................................................................28200.0511000
...................................................................................................GCTTTGCTAGT------TGAGCTCTGGTAGG-GG..................................................................27200.0511000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTG............................................................................25200.0510010
..............................................CCAGGATTGCTCCCATCTCCTCGATTT..............................................................................................................................27200.0511000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGC..............................................................................23200.0510010
........................TTC------GTCAGAAGGTCGTCCAGGATTGCTC.............................................................................................................................................28200.0511000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTA.......................................................................24200.0511000
.....................................GAAGGTCGTCCAGGATTGCTCCCATC........................................................................................................................................26200.0511000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGT..............................................................................23200.0510001
....................................................TTGCTCCCATCTCCTCGATTTCTAGCT........................................................................................................................27200.0511000
.......................................................................................................TGCTAGT------TGAGCTCTGGTA.......................................................................19200.0511000
.....................................................TGCTCCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................27200.0511000
.........................................................CCCATCTCCTCGATTTCTAGCTG-----C.................................................................................................................24200.0511000
.............................................TCCAGGATTGCTCCCATCTCC.....................................................................................................................................21200.0511000
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGA.................23200.0510010
.........................................................CCCATCTCCTCGATTTCTAGC.........................................................................................................................21200.0511000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGG-....................................................................22200.0511000
.........................TC------GTCAGAAGGTCGTCCAGGATTGCA..............................................................................................................................................26200.0511000
............................................................................................TTGACCCGCTTTGCTAGT------TG.................................................................................20200.0511000
.......................CTTC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................27200.0511000
............................................................ATCTCCTCGATTTCTAGCTG-----..................................................................................................................20200.0511000
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATC...................21200.0511000
................................................................................................CCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................25200.0510010
.....................................................TGCTCCCATCTCCTCGATTTCTA...........................................................................................................................23200.0511000
.............................................................................................TGACCCGCTTTGCTAGT------TGAAA..............................................................................22200.0510010
...................................CAGAAGGTCGTCCAGGATTGCTCC............................................................................................................................................24200.0511000
........................................................................................................GCTAGT------TGAGCTCTGGTAGG-GG..................................................................22200.0511000
...............................................................................................ACCCGCTTTGCTAGT------TGAGCTCTG..........................................................................24200.0511000
........................TTC------GTCAGAAGGTCGTCCAGGATT.................................................................................................................................................24200.0510010
..............................................................................................GACCCGCTTTGCTAGT------TGAGCTCT...........................................................................24200.0511000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----C.................................................................................................................25200.0511000
......................................................GCTCCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................27200.0511000
.........................TC------GTCAGAAGGTCGTCCAGGATT.................................................................................................................................................23200.0510010
.............................................TCCAGGATTGCTCCCATCTCCTCG..................................................................................................................................24200.0511000
..........................................................CCATCTCCTCGATTTCTAGCTG-----GG................................................................................................................24200.0511000
...........................................................CATCTCCTCGATTTCTAGCTG-----GG................................................................................................................23200.0511000
........................................................TCCCATCTCCTCGATTTCTA...........................................................................................................................20200.0510001
.........................................................CCCATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................26200.0511000
..........................................................CCATCTCCTCGATTTCTAGCT........................................................................................................................21200.0511000
droSim2
CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTGCACCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTGACCCGCTTTGCTAGT------TGAGCTCTGGTAGGGGGTGATGTCGCTTCCAATGGTCTCTTGGG----------GG-TGCCATCGCTCGGGTTTT----GGGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGA...............................................................2717565.00756500040022784533418210541634000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTG................................................................2613337.0033370014007291705492293632462000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTGA...............................................................2913231.0032310000001668135020740002000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGT.................................................................2512510.00251000170003611146533371500275000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGG..................................................................2652410.0012050012432004697332430536442197472000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTG................................................................2812342.0023420010001024873380511075000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGT.................................................................2712037.002037002000055074655913520070000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGG..................................................................2461844.1711065006450028984508207698934791825000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGT.................................................................2611487.00148700920035372926910914020000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGTG................................................................2711439.0014390000004767191507219030000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGG..................................................................2551357.4067870019161102280250013833362292101000
........................TTC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................2621169.0023380043139013235939562173102492000
........................TTC------GTCAGAAGGTCGTCCAGGAT..................................................................................................................................................234979.75391900151008976568453551208860000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGG...................................................................237854.7159830029001487195215277342061650000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGG...................................................................256703.5042210121500141680113873772041161000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGG...................................................................246606.67364000240010951078953343159150000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGTGA...............................................................281525.005250000002252811612000000
........................TTC------GTCAGAAGGTCGTCCAGGATTG................................................................................................................................................252515.00103000020055524311089931000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGA...............................................................241355.0035500020012187399221020000
........................TTC------GTCAGAAGGTCGTCCAGGATT.................................................................................................................................................244234.5093800470040838251252601772000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGAA..............................................................281227.0022700000048162860021000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCTTG.........................................252202.50405001510271251765021152000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTG................................................................231174.00174000000311116395000000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGCT.................................................................................................272158.50317001260013969291437200000
........................TTC------GTCAGAAGGTCGTCCAGGA...................................................................................................................................................225155.20776002100114221061110048723000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGG..................................................................216153.50921005500815328416444240000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGATG.............................................................261143.00143000000181011157010000
....TCACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................293135.6740700100014819325371020000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGG....................................................................227132.8693000120018627424018839000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGG...................................................................207132.00924003100745596818235020000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGC..................................................................................................262132.0026402185500471272804100000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGC.................................................................275121.406070000003631686790000000
........................TTC------GTCAGAAGGTCGTCCAGGAA..................................................................................................................................................235111.4055700000063220052420000
.............................................................................................................................................................................TGCCATCGCTCGGGTTTT----GGGG2210109.1010910006130224267301150120550000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGG....................................................................246107.676460013001098127911357030000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGT.................................................................22199.00990000001429434000000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................27296.50193000000257101240000000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCTT..........................................24288.5017700351840187531723020000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGG....................................................................23685.50513001300861121798545020000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCTTGGG----------.............................27275.0015000030084392022000000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................28269.501390000003454861000000
........................TTC------GTCAGAAGGTCGTCCAGGATA.................................................................................................................................................24469.002760000006224002602000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCTTGG........................................26268.00136000150056222965210000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTT................................................................28266.5013300000065402160010000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGCTT................................................................................................28266.001320049003070280000000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCG...................................................................................................25265.50131010118016105075500000
........................................................................................................................................TGTCGCTTCCAATGGTCTCTTGGG----------G............................25760.86426005500916414541651000000
......................................................................TTTCTAGCTG-----GGGGGTCTTGA.......................................................................................................21259.50119000980281634815100000
.........................TC------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................25356.331690050004819532241161000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTT................................................................26256.0011200010026581880010000
......................................................................TTTCTAGCTG-----GGGGGTCTTGAC......................................................................................................22255.501110116416812720423000000
...............TGGTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................26453.502140000000167200000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGC.................................................................25652.3331400100013412640121000000
..........CGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................23451.50206000100358739404000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGAT..............................................................25150.0050000100133491010000
......................................................................TTTCTAGCTG-----GGGGGTCTTG........................................................................................................20249.0098000143204714125100000
........................TTC------GTCAGAAGGTCGTCCAGG....................................................................................................................................................21547.0023500400012618517216110000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTGAA..............................................................30142.0042000000339000000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGG....................................................................19741.2928900420031161166112110000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGAAA.............................................................29140.0040000000733000000000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACC.....................................................................................................23239.007800074001330113001000
.............................................................................................................................................................................TGCCATCGCTCGGGTTTT----GGG.211037.4037400010266383934755150000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGAT..............................................................28137.00370000001124000020000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTCGC.........................................................26137.0037000000476810020000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGTT................................................................27237.007400000023271770000000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTG..........................................................................26235.00700000001106511010000
........................TTC------GTCAGAAGGTCGTCCAGGATAA................................................................................................................................................25434.501380000001200001350000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGG.....................................................................21834.502760013004385586025100000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGT..................................................................................................26234.0068001600611151100000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................29234.0068000000559130000000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTC............................................................................24233.00660020000073263070000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGG.....................................................................23730.862160002004926483456010000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGATG.............................................................29130.0030000000723000000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGAA..............................................................25130.0030000000019371000000
..........................................................................................................TAGT------TGAGCTCTGGTAGG.....................................................................18829.8823900000071668544000000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTAGG.....................................................................26329.33880010006398313000000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTCGCC........................................................27129.0029000000117242021000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGTA................................................................27229.005800010012251091000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGT...............................................................27129.0029000000617320010000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTCTG..........................................................................27228.50570000000192350010000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................28228.5057000000146280000000
........................................................................................................................................TGTCGCTTCCAATGGTCTCTTGG........................................23828.2522600020028271055311000000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCT...........................................23228.0056003200712359150000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTAGGG....................................................................27227.00540000003312161001000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTCTTGGG----------G............................28225.5051000300378300000000
..............................................................................................GACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................26225.50510000000104370000000
........................................................................................................................................TGTCGCTTCCAATGGTCTCTTGGG----------.............................24724.431710006001610724124200000
........................TTC------GTCAGAAGGTCGTCCAGGAAA.................................................................................................................................................24524.401220000001110001190000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGC.................................................................26524.2012101000066381510000000
...............................................................................................ACCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................25524.2012100010052411764000000
...CTCACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................30323.67710000002932810010000
......ACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................27323.337000300015317140000000
.........................TC------GTCAGAAGGTCGTCCAGGATTG................................................................................................................................................24323.0069000000121010577000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCTC............................................................................25221.5043009000050212060000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGA.................................................................26521.4010700010023482174030000
.........................TC------GTCAGAAGGTCGTCCAGGAT..................................................................................................................................................22521.00105000000191318720451000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTT................................................................23221.00420000000204162000000
.............TATGGTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................28321.0063000100000062000000
.......CCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................26320.6762003000161315141000000
..........................................................................................................TAGT------TGAGCTCTGGTAG......................................................................17920.3318300000071124591000000
..............................................................................................................................................................................GCCATCGCTCGGGTTTT----GGGG211020.3020300000001485455000000
........................TTC------GTCAGAAGGTCGTCCAGGATTA................................................................................................................................................25420.2581000000000000801000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTA................................................................28220.004000000011121410002000
........CCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................25419.757900510061630174000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGG.....................................................................22719.711380030002938331718000000
..............................................................................................................................................................................GCCATCGCTCGGGTTTT----GGG.201019.6019600000031443442000000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGA.................................................................27519.609800000039282060050000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCC....................................................................................................24219.003800110001142010000000
..........CGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................24419.007600000073913161000000
........................................................................TCTAGCTG-----GGGGGTCTTGACCCGCT.................................................................................................25318.00540000001371150000000
.....CACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................28317.335200000012216120010000
.....................................................................................................................................TGATGTCGCTTCCAATG.................................................17217.0034000000000034000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGT..................................................................24716.43115001100283131136040000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGA.................................................................25616.17970000002030141400181000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATG.............................................................22116.001600000001076020000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGTGAA..............................................................29116.001600000079000000000
.............................................................................................................................................................................TGCCATCGCTCGGGTTTT----GG..201015.801580001002820542722330000
.........................TC------GTCAGAAGGTCGTCCAGGATT.................................................................................................................................................23515.407700000030199710101000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGATT.............................................................26115.0015000000010131000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGT...............................................................24115.0015000000012030000000
............................................................................................TTGACCCGCTTTGCTAGT------TGAGCT.............................................................................24214.5029000000080190020000
........................................................................................................................................TGTCGCTTCCAATGGTCTCTTGGG----------GG-..........................26714.149900220017922047000000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCT.............................................21214.002800100042724062000
....TCACCCCGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................30314.0042000000629700000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTC................................................................26114.001400000015521000000
......................................................................TTTCTAGCTG-----GGGGGTCTTGACCCGA..................................................................................................26313.3340010400782215100000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGT..................................................................26612.837700000025831112000000
........................TTC------GTCAGAAGGTCGTCCAGGATTGA...............................................................................................................................................26212.5025000000100000240000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTA................................................................26312.0036000000313580061000
........................TTC------GTCAGAAGGTCGTCCAGGAAAA................................................................................................................................................25512.0060000000110000580000
.............................................................................................TGACCCGCTTTGCTAGT------TGAGCTCT...........................................................................25211.5023000000032170010000
.......................CTTC------GTCAGAAGGTCGTCCAGGAT..................................................................................................................................................24411.5046000000000030430000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGTT..................................................................26611.336800000044101220000000
....................................................................................................................................................TGGTCTCTTGGG----------GG-TGCCATCGCT................24711.2979000000142270000000
........................TTC------GTCAGAAGGTCGTCCAGGATTGCA..............................................................................................................................................27111.001100000030002060000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGT............................................................23111.001100000002114030000
.........................TC------GTCAGAAGGTCGTCCAGGATTGCACC............................................................................................................................................28111.001100700012001000000
.............................................................................................................T------TGAGCTCTGGTAGGGGGTGATG.............................................................23111.001100000001424000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAG......................................................................20910.5695001024022152175000000
.....................................................................................................................................TGATGTCGCTTCCAATGGTC..............................................20210.502102102010509010000
.............TATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................21410.2541000000671369000000
........................TTC------GTCAGAAGGTCGTCCAGGATTAA...............................................................................................................................................26410.2541000000000000410000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTC...........................................................24110.001000000001052020000
.............TATGGTTGACCTTC------GTCAGAAGA.............................................................................................................................................................23310.00300000000121161000000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTT...........................................................24110.001000000001126000000
..........................C------GTCAGAAGGTCGTCCAGGATTGCACC............................................................................................................................................27110.0010001000000000000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGTT..................................................................2479.716800000017311640000000
.....................................................................................................................................TGATGTCGCTTCCAATGGTCTC............................................2229.501900002000415250000
.....................................................................................................................................TGATGTCGCTTCCAAT..................................................1629.5019000000000019000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTA.......................................................................1999.4485100000483663000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGT..................................................................2568.835300200013181271000000
........................TTC------GTCAGAAGGTCGTCCAGGATTGT...............................................................................................................................................2628.5017000000000010160000
.....................................................................................................................................TGATGTCGCTTCCAATGGT...............................................1928.5017000030002011001000
..........CGTTATGGTTGACCTTC------GTCAGAAGGA............................................................................................................................................................2738.3325000000120121000000
..........CGTTATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................2638.3325000000414142000000
...............TGGTTGACCTTC------GTCAGAAGGTCGT.........................................................................................................................................................2548.2533000000000033000000
................................................................................................CCCGCTTTGCTAGT------TGAGCTCTGG.........................................................................2458.2041000000173300000000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTGT...............................................................2918.00800000035000000000
........CCCGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................2648.0032000000377150000000
..........................C------GTCAGAAGGTCGTCCAGGATTGC...............................................................................................................................................2437.672300110062607000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTA.......................................................................2087.6361003000033349000000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTAGGGG...................................................................2827.501500000018330000000
.TCCTCACCCCGTTATGGTTGACCTTC------GT....................................................................................................................................................................2847.5030000000155171010000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGA..................................................................2567.33440010001313851030000
......................................................................TTTCTAGCTG-----GGGGGTCT..........................................................................................................1887.25580002390201012200000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGT...................................................................2377.14500000001317694010000
..........................................................................................................TAGT------TGAGCTCTGGTA.......................................................................1697.11640000000361234000000
........................................................................................................GCTAGT------TGAGCTCTGGTAGGGGGTGA...............................................................2617.00700000022201000000
..........CGTTATGGTTGACCTTC------GTCAGAAGA.............................................................................................................................................................2637.00210000000100110000000
....................................AGAAGGTCGTCCAGGATTGCACCCATC........................................................................................................................................2717.00700000000007000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGATA.............................................................2617.00700100003012000000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTCG..........................................................2517.00700000010001050000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTAGGGGG..................................................................2917.00700000004210000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGA..................................................................2477.00490000008119720120000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGTGATGT............................................................2717.00700000002002030000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTA.......................................................................2187.0056000000741143000000
...............TGGTTGACCTTC------GTCAGAAGGTCGTCC.......................................................................................................................................................2746.75270001000001214000000
............................................................................GCTG-----GGGGGTCTTGACCCGCTT................................................................................................2236.6720000000000020000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGT....................................................................1976.57460000002181232000000
..............................................................................................GACCCGCTTTGCTAGT------TGAGCTCTGGT........................................................................2726.501300000006250000000
........................TTC------GTCAGAAGGTCGTCCAGGATAAA...............................................................................................................................................2646.5026000000001000250000
.....................ACCTTC------GTCAGAAGGTCGTCCAGGAT..................................................................................................................................................2646.5026002011050422000000
........................TTC------GTCAGAAGGTCGTCCAG.....................................................................................................................................................2076.2944000000107000351000
........................TTC------GTCAGAAGGTCGTCCAGGT...................................................................................................................................................2256.2031000000000000301000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAG......................................................................2286.13490050009311318000000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGT...................................................................2566.003600210098834010000
.............TATGGTTGACCTTC------GTCAGAAGG.............................................................................................................................................................2336.001800000026523000000
.......................................................................................................TGCTAGT------TGAGCTCTGGTAGGGGGTGAAAA............................................................3016.00600000015000000000
....................................................................................................................TGAGCTCTGGTAGGGGGTGATGTCGCT........................................................2716.00600000000003030000
........................................................................TCTAGCTG-----GGGGGTCTTGACCCGCTT................................................................................................2636.0018000000013023000000
.............TATGGTTGACCTTC------GTCAGAAGGTCGT.........................................................................................................................................................2736.0018000000030114000000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGA..................................................................2666.0036000000125624070000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGGGTC................................................................2816.00600000023001000000
..........................................................CCATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................25105.8058000000006520000000
..................................................................................................CGCTTTGCTAGT------TGAGCTCTGGTAG......................................................................2545.7523000000051170000000
........................................................................TCTAGCTG-----GGGGGTCTTGACCCG...................................................................................................2335.6717000000013031000000
.TCCTCACCCCGTTATGGTTGACCTTC------GTCAGA................................................................................................................................................................3235.6717000000115010000000
...............................................................................................................................................TCCAATGGTCTCTTGGG----------G............................1895.6751000000031641000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGTT..................................................................2565.50330000001611600000000
dm3
CTCCTCACCCCGTTATGGTTGACCTTC------GTCAGAAGGTCGTCCAGGATTAATCCCATCTCCTCGATTTCTAGCTG-----GGGGGTCTTTGCCCGCTTTGCTAGT------TGAGCTCTGGTAGGGGGGGATGTCGCTTCCAATGGTCTCTTGGG----------GGGGGCCATCGCTTGGGTTCT----GGGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................CCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................2434.671400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----G.................................................................................................................2533.67110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000006000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................CATCGCTTGGGTTCT----GGG.1822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTTGCTAGT------TGAGCTCTGGTAGGGG...................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................CAGAAGGTCGTCCAGGATTAATCCC...........................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTTGCCCGCTTTGCTAGT------TGAGCTCTG..........................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGAAGGTCGTCCAGGATT.................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GATTTCTAGCTG-----GGGGGTCTT.........................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATCGCTTGGGTTCT----GGGG1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGAAGGTCGTCCAGGATTAATCCC...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTAATCCCATCTCCTCGATTTCTAGCTG-----..................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTTCTAGCTG-----GGGGGTCTTT........................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000
.......CCCCGTTATGGTTGACCTTC------GTCAGAA...............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TCTGGTAGGGGGGGATGTC...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................GCCATCGCTTGGGTTCT----GGGG2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTTC------GTCAGAAGGTCGTCCAGG....................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CCGCTTTGCTAGT------TGAGCTCT...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................TAGGGGGGGATGTCGCTTCCAATGGT...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCGCTTCCAATGGTCTCTTGGG----------GGGGG........................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TAATCCCATCTCCTCGATTTCTAGCT........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAGAAGGTCGTCCAGGATTAATCCCA..........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGG...................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCTCACCCCGTTATGGTTGACCTTC------......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TAATCCCATCTCCTCGATTTCTAGC.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGG...................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
.......................................................ATCCCATCTCCTCGATTTCTAGC.........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CCATCTCCTCGATTTCTAGCTG-----GGGG..............................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TATGGTTGACCTTC------GTCAGAAGGTC...........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TCTAGCTG-----GGGGGTCTTTGC......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................TTGCTAGT------TGAGCTCTGGTAGGGGGG.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AATCCCATCTCCTCGATTTCTAGCTG-----A.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTTGACCTTC------GTCAGAAGGTCGTC........................................................................................................................................................2440.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTCGATTTCTAGCTG-----GGGGGT............................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.............................................................TCTCCTCGATTTCTAGCTG-----G.................................................................................................................2030.6720000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
CTCCTCACCCCGTTATGGTTG..................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CTAGT------TGAGCTCTGGTACCC....................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAGT------TGAGCTCTGGTAGGGGGG.................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GCTAGT------TGAGCTCTGGTAGGG....................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTC------GTCAGAAGGTCGTCCAGG....................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................TTGCCCGCTTTGCTAGT------TGCC...............................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................TC------GTCAGAAGGTCGTCCAGGATT.................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CTAGT------TGAGCTCTGGTACC.....................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTC------GTCAGAAGGTCGTCCAGGA...................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................T------TGAGCTCTGGTAGGGGG..................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............TGGTTGACCTTC------GTCAGAAGT.............................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CGATTTCTAGCTG-----GGGGGT............................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCCATCTCCTCGATTTCTAGCTG-----T.................................................................................................................2530.3310000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CATCTCCTCGATTTCTAGCTG-----..................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................CTCCTCGATTTCTAGCTG-----G.................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................CATCTCCTCGATTTCTAGCTG-----GGG...............................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGTTGACCTTC------GTCAGAA...............................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTTCTCACCCCATTATGGTTGACCTTC------GTCAAAAGGTCATCCAGAATAGCTCCCATCTCCGCGATTTCTAGCTG-----CGGGGTCTTAATCCTCTTTGCTGGC------TGAACTCTGGTAGGTGGGGAGGTAAGTTCTAAAGGCCTCTTAGG----------GG-TGTTGTCGCTTTGATTCA----GGGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GCTCTAACGCCATTTTGATTGACCTTC------GTCAGAGGGTCGTCCAGGATGGCTCCCATCTCCTCGATTTCCATCAG-----CGGGATCTTGACCCGCTTTGCTGGT------TGGACTCTTGTATGTGGAGAGGTCTCTTCTAGTGGACTCTTGGG----------AG-TGATGTCGCCTGTCTTTG----GGGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CTCCTCACTTGTTTCTCGTGCGTTTGC------TGGATGATGTCCTCCAATATCGCCTCTAACTCC-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGACGCACCTGCATGACACTCGTGAGA------TGGATGACTTCGTCGAGAAGCACTCCAATCTCCGCGAGCTGTTCCAGTCCCGTGAGCTCCTGGTCCGCTTTG----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTCCCAACTTTCTGGTCGTTGACTTTC------CCAAGAATGTCGTCCAGAATTTCTCCCAATTCCGTTACATCGCGATG-----TGGTGTTTTGGCCTTCTT------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTCGGACTTTCTGCTCGTTAACCTTG------GCTAACAAATCGACCAGTATCAATCCCATCTCCTTGATCTGTGGCTT-----GGGCGCCTTGATCTTTTTGCGTGGG------TGGGCCGCTATGGGAACCAGGACTC------------TCTCCGAGTCTTGGCCAGT-TGCCGTGGAGCCGCCGC-----TAGGSizeHit CountTotal NormTotal
No Reads
droAna3
CTTCTAACCTTATGGTCGTTTACCTTT------GCCAAAAGGTCATCCAGGATCGCGCCCATCTCAACGATGGGTGTTTG-----CGGGGTTTTGGTTTTCTTCTCTGGT------TGGGAGCTACATGGCGGGGACAACTGGTCCCGATGCCTCTTCGG----------GG-TGTGATCGCTCGCCATCTGCT-TGGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CTTCTGACCTTTTGGTCGTTCACCTTA------GCCAAAAGGTCTTCCAGGATCGCACCCATCTCATCAATGGGGGTTTG-----CGGCATTTTTGATTTTTTCCCCGGT------TGGGAATTTCCTGGCGGAGATAGCTCGTCCCGATGCCTCTTCGG----------GG-TATGTTCGCTTGCCGTCTGCTTGGGGSizeHit CountTotal NormTotal
No Reads
dp5
GACCTCTGGCCCTTCTCGTTCATCTGG------TAGAGTAGGTCGTCCAGAATTGCGCCAATCTCATCTATGTCCTGTAC-----GCGGTTCCTGCTTCGCTTGGGGGGGGTTTTTCTCCCGCTACTCGATGGTGTAGGGGGGTCCCTCGGTCTCTTCGG----------GG-TGTCAGTGCCC---------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................CTATGTCCTGTAC-----GCGGTTCCTG........................................................................................................233147.0044103793012034400
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGC.......................................................................................................243139.33418032915116045300
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCT......................................................................................................25363.001890165304131300
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTT.....................................................................................................26360.33181017610001300
...................................................................CTATGTCCTGTAC-----GCGGTTCC..........................................................................................................21354.331630146100400300
...................................................................CTATGTCCTGTAC-----GCGGTTC...........................................................................................................20343.33130011650900000
...................................................................CTATGTCCTGTAC-----GCGGTTCCT.........................................................................................................22337.33112091110300700
...................................................................CTATGTCCTGTAC-----GCGGTT............................................................................................................19413.755504900500100
....................................................................TATGTCCTGTAC-----GCGGTTCCTGC.......................................................................................................23312.333702810000800
....................................................................TATGTCCTGTAC-----GCGGTTCCTG........................................................................................................22311.003303000000300
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCTT.....................................................................................................2538.672602500000100
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGT.......................................................................................................2436.672001700300000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCT......................................................................................................2435.331601500000100
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTA.....................................................................................................2635.331601510000000
...................................................................CTATGTCCTGTAC-----GCGGTTA...........................................................................................................2045.252101910100000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTTC....................................................................................................2734.33130900001300
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTTT....................................................................................................2734.00120710001300
....................................................................TATGTCCTGTAC-----GCGGTTCC..........................................................................................................2034.001201110000000
..................................................................TCTATGTCCTGTAC-----GCGGTTCCTG........................................................................................................2433.671101100000000
.............TCTCGTTCATCTGG------TAGAGTAGGTCG..........................................................................................................................................................2643.00120400000800
....................................................................TATGTCCTGTAC-----GCGGTTCCT.........................................................................................................2133.0090900000000
....................................................................TATGTCCTGTAC-----GCGGTTC...........................................................................................................1933.0090900000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTT........................................................................................................2333.0090500100300
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTG...............................................................................................2232.6780800000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGGGGG...........................................................................................2632.6780600000200
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGG..............................................................................................2332.3370600100000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCTTC....................................................................................................2632.3370310000300
.............TCTCGTTCATCTGG------TAGAGTAGGTC...........................................................................................................................................................2542.2590200000700
...................TCATCTGG------TAGAGTAGGTCGTCCA......................................................................................................................................................2442.2590900000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGA.......................................................................................................2432.0060400000200
...................TCATCTGG------TAGAGTAGGTCGTCCAG.....................................................................................................................................................2542.0080800000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTTCGCTT................................................................................................2632.0060510000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTA........................................................................................................2332.0060600000000
...................................................................CTATGTCCTGTAC-----GCGGTTCAA.........................................................................................................2241.7570700000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGGG.............................................................................................2431.6750500000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCA......................................................................................................2531.6750500000000
...........................................................................TGTAC-----GCGGTTCCTGCTTCGCTTG...............................................................................................2431.6750500000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTTCGC..................................................................................................2431.6750500000000
.............TCTCGTTCATCTGG------TAGAGTAGG.............................................................................................................................................................2341.5060500000100
...................................................................CTATGTCCTGTAC-----GCGGTTCA..........................................................................................................2141.5060600000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGGGG............................................................................................2531.3340400000000
..................................................................TCTATGTCCTGTAC-----GCGGTTCC..........................................................................................................2231.3340400000000
..................................................................TCTATGTCCTGTAC-----GCGGTTCCTGC.......................................................................................................2531.3340300100000
..................................................................TCTATGTCCTGTAC-----GCGGTTCCTGCTT.....................................................................................................2731.3340310000000
.....................................................................ATGTCCTGTAC-----GCGGTTCCTGCTT.....................................................................................................2431.3340400000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTTCG...................................................................................................2831.0030300000000
.........................................................................CCTGTAC-----GCGGTTCCTGCTT.....................................................................................................2031.0030300000000
....................................................................TATGTCCTGTAC-----GCGGTT............................................................................................................1841.0040400000000
...........................................................................................................................TACTCGATGGTGTAGGGG..........................................................1841.0040400000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTTCGCT.................................................................................................2531.0030300000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTTT.......................................................................................................2431.0030300000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTC.....................................................................................................2631.0030020000100
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGAAA.....................................................................................................2631.0030300000000
...............................................................................C-----GCGGTTCCTGCTTCGCTTGGG.............................................................................................2231.0030300000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTTC....................................................................................................2231.0030300000000
...................TCATCTGG------TAGAGTAGGTCGTC........................................................................................................................................................2241.0040400000000
..................................................................TCTATGTCCTGTAC-----GCGGTTCCT.........................................................................................................2331.0030200001000
...................................................................CTATGTCCTGTAC-----GCGGTA............................................................................................................1940.7530200100000
...................................................................CTATGTCCTGTAC-----GCGGTTCAAA........................................................................................................2340.7530300000000
...................................................................CTATGTCCTGTAC-----GCGGT.............................................................................................................1840.7530100200000
...................TCATCTGG------TAGAGTAGGTCGTCCAGA....................................................................................................................................................2640.7530111000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTA.....................................................................................................2130.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTTCGC..................................................................................................2930.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTTG....................................................................................................2730.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCAA........................................................................................................2330.6720200000000
......................................................................TGTCCTGTAC-----GCGGTTCCTG........................................................................................................2030.6720100000100
.....................................................................ATGTCCTGTAC-----GCGGTTCCTG........................................................................................................2130.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGTAA.....................................................................................................2630.6720110000000
..................................................................TCTATGTCCTGTAC-----GCGGTTC...........................................................................................................2130.6720200000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGT.......................................................................................................2330.6720200000000
...........................................................................TGTAC-----GCGGTTCCTGCTTCGCTT................................................................................................2330.6720200000000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTCCCTCG.................................................2730.6720200000000
........................................................................TCCTGTAC-----GCGGTTCCTG........................................................................................................1830.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCA.........................................................................................................2230.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGTA......................................................................................................2530.6720200000000
...................................................................CTATGTCCTGTAC-----GCGGTTCT..........................................................................................................2130.6720200000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCTAA....................................................................................................2630.6720000000200
.............TCTCGTTCATCTGG------TAGAGTAGGT............................................................................................................................................................2440.5020200000000
...................TCATCTGG------TAGAGTAGGTCGTCCAGAAT..................................................................................................................................................2840.5020200000000
...................TCATCTGG------TAGAGTAGGTCGTCC.......................................................................................................................................................2340.5020200000000
...................TCATCTGG------TAGAGTAGGTCGT.........................................................................................................................................................2140.5020200000000
.............................................................TCTCATCTATGTCCTGTAC-----GCGGTT............................................................................................................2520.5010100000000
.....................................................................................GCGGTTCCTGCTTCGCTTGGGGG...........................................................................................2340.5020200000000
...............................................................TCATCTATGTCCTGTAC-----GCGGTTCC..........................................................................................................2520.5010000001000
.........................................................CCAATCTCATCTATGTCCTGTAC-----GCGG..............................................................................................................2720.5010100000000
.................................TAGAGTAGGTCGTCCAGAATTGCGC.............................................................................................................................................2540.5020200000000
..............CTCGTTCATCTGG------TAGAGTAGGTC...........................................................................................................................................................2440.5020200000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCTTT....................................................................................................2630.3310100000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGGGGT...........................................................................................2630.3310000100000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTG.....................................................................................................2630.3310100000000
..........................................................................CTGTAC-----GCGGTTCCTGCTT.....................................................................................................1930.3310100000000
....................................................................TATGTCCTGTAC-----GCGGTTCCAA........................................................................................................2230.3310100000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCAA.....................................................................................................2630.3310100000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTAA.......................................................................................................2430.3310100000000
.....................................................................ATGTCCTGTAC-----GCGGTTC...........................................................................................................1830.3310100000000
..................................................................TCTATGTCCTGTAC-----GCGGTTCCTGCT......................................................................................................2630.3310000000100
.....................................................................ATGTCCTGTAC-----GCGGTTCCT.........................................................................................................2030.3310100000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCTAA....................................................................................................2730.3310100000000
..........................................................................CTGTAC-----GCGGTTCCTGCT......................................................................................................1830.3310100000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCCA........................................................................................................2330.3310100000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCT.................................................................................................2030.3310100000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTA........................................................................................................2230.3310100000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTT.....................................................................................................2130.3310100000000
.............................................................................................................................CTCGATGGTGTAGGGGGGTCC.....................................................2130.3310000100000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGG.......................................................................................................2430.3310100000000
....................................................................TATGTCCTGTAC-----GCGGTTCCA.........................................................................................................2130.3310100000000
............................................................................GTAC-----GCGGTTCCTGCTTCGCTTGG..............................................................................................2430.3310100000000
.....................................................................ATGTCCTGTAC-----GCGGTTCCTGC.......................................................................................................2230.3310000100000
.......................................................................GTCCTGTAC-----GCGGTTCCT.........................................................................................................1830.3310100000000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTCCCT...................................................2530.3310000001000
...............................................................................................................................CGATGGTGTAGGGGGGTCCCTCG.................................................2330.3310100000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTT........................................................................................................2230.3310100000000
......................................................................TGTCCTGTAC-----GCGGTTCCTGCTTT....................................................................................................2430.3310100000000
.................................................................................................................TTTCTCCCGCTACTCGATGGTG................................................................2230.3310100000000
............................................................................GTAC-----GCGGTTCCTGCTTCGCTTGGG.............................................................................................2530.3310100000000
....................................................................TATGTCCTGTAC-----GCGGTTCCTGCAA.....................................................................................................2530.3310100000000
...................................................................................................................TCTCCCGCTACTCGATGGTGTAGG............................................................2430.3310100000000
.....................................................................ATGTCCTGTAC-----GCGGTTCC..........................................................................................................1930.3310100000000
........................................................................TCCTGTAC-----GCGGTTCCTGCTTCG...................................................................................................2330.3310000000100
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGTGA.....................................................................................................2630.3310000100000
...........................................................................TGTAC-----GCGGTTCCTGCTTCGCTTGG..............................................................................................2530.3310100000000
.............................................................................TAC-----GCGGTTCCTGCTTCGCTTGAAA............................................................................................2530.3310010000000
...................................................................CTATGTCCTGTAC-----GCGGTTCTA.........................................................................................................2230.3310100000000
..............................................................................................................................TCGATGGTGTAGGGGGGTCCCTCG.................................................2430.3310100000000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTAAA......................................................................................................2530.3310100000000
......................................................................TGTCCTGTAC-----GCGGTTCCTGCTTC....................................................................................................2430.3310000000100
.............................................TCCAGAATTGCGCCAATCTC......................................................................................................................................2070.2920200000000
..........................................TCGTCCAGAATTGCGCCAATCT.......................................................................................................................................2270.2920200000000
...................................................................CTATGTCCTGTAC-----GCGAAA............................................................................................................19150.2740400000000
.....................ATCTGG------TAGAGTAGGTCGTCCA......................................................................................................................................................2240.2510100000000
.................................TAGAGTAGGTCGTCCAGAATTGCGCCAA..........................................................................................................................................2840.2510100000000
........................TGG------TAGAGTAGGTCGTCCAGAATT.................................................................................................................................................2440.2510000001000
........................TGG------TAGAGTAGGTCGTCCAGAATTGC...............................................................................................................................................2640.2510100000000
...................................................................CTATGTCCTGTAC-----GCGGA.............................................................................................................1840.2510100000000
...................................................................CTATGTCCTGTAC-----GCGGTAA...........................................................................................................2040.2510100000000
......................................TAGGTCGTCCAGAATTGCGCC............................................................................................................................................2140.2510100000000
..........................G------TAGAGTAGGTCGTCCAGAATTGC...............................................................................................................................................2440.2510100000000
......................TCTGG------TAGAGTAGGTCGTCCAGAAT..................................................................................................................................................2540.2510100000000
...............TCGTTCATCTGG------TAGAGTAGGTCG..........................................................................................................................................................2440.2510100000000
...................TCATCTGG------TAGAGTAGGTCGTCT.......................................................................................................................................................2340.2510100000000
.........................................................................................................................GCTACTCGATGGTGTAGG............................................................1840.2510100000000
..........................................................................................................................CTACTCGATGGTGTAGGGG..........................................................1940.2510100000000
...............TCGTTCATCTGG------TAGAGTAGG.............................................................................................................................................................2140.2510100000000
....................................................................TATGTCCTGTAC-----GCGGTTA...........................................................................................................1940.2510100000000
.............TCTCGTTCATCTGG------TAGAGTAGGTCGT.........................................................................................................................................................2740.2510100000000
...........................................................................................................................TACTCGATGGTGTAGGGGTT........................................................2040.2510100000000
.........................................................................................................................GCTACTCGATGGTGTAGGG...........................................................1940.2510100000000
....................................................................TATGTCCTGTAC-----GCGGTTCA..........................................................................................................2040.2510100000000
....................CATCTGG------TAGAGTAGGTCGTCC.......................................................................................................................................................2240.2510100000000
..............CTCGTTCATCTGG------TAGAGTAGGTCGTCC.......................................................................................................................................................2840.2510100000000
..........................................................................................................................CTACTCGATGGTGTAGGGTA.........................................................2050.2010100000000
.............TCTCGTTCATCTGG------TAGAGTAG..............................................................................................................................................................2250.2010100000000
...................................................................CTATGTCCTGTAC-----GCGGAA............................................................................................................1950.2010100000000
..........................................TCGTCCAGAATTGCGCCAATCTC......................................................................................................................................2370.1410100000000
.......................................AGGTCGTCCAGAATTGCGCCAATC........................................................................................................................................2470.1410100000000
droPer2
GACCTCTGGCCCTTCTCGTTCATCTGG------TAGAGTAGGTCGTCCAGAATTGCGCCAATCTCATCTATGTCCTGTAC-----GCGGTTCCTGCTTCGCTTGGGGGGGGTTTTTCTCCCGCTACTCGATGGTGTAGGGGGGTCCCTCGGTCTCTTCGG----------GG-TATCAGGGCCC---------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................TCTCATCTATGTCCTGTAC-----GCGGTT............................................................................................................2515.005050000
.............................................................TCTCATCTATGTCCTGTAC-----GCGGT.............................................................................................................2413.003030000
...................TCATCTGG------TAGAGTAGGTCGTCCAG.....................................................................................................................................................2582.75220220000
.............................................................TCTCATCTATGTCCTGTAC-----GCGG..............................................................................................................2312.002020000
...................TCATCTGG------TAGAGTAGGTCGTCCA......................................................................................................................................................2481.38110110000
..............................................................CTCATCTATGTCCTGTAC-----GCGGT.............................................................................................................2311.001010000
.....................................................TGCGCCAATCTCATCTATGTCCTG..........................................................................................................................2411.001010000
.............................................................TCTCATCTATGTCCTGTAC-----GCGGTTC...........................................................................................................2611.001010000
..................................................AATTGCGCCAATCTCATCTATGTCCTG..........................................................................................................................2711.001010000
.............................................................TCTCATCTATGTCCTGTAC-----GCG...............................................................................................................2211.001010000
.....................................................TGCGCCAATCTCATCTATGTC.............................................................................................................................2111.001010000
................................................................................................TTCGCTTGGGGGGGGTTTTTCTCCCGC............................................................................2711.001010000
.............................................................TCTCATCTATGTCCTGTAC-----GCGGTTCC..........................................................................................................2711.001010000
...................TCATCTGG------TAGAGTAGGTCGTCC.......................................................................................................................................................2380.887070000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTTT.......................................................................................................2420.501001000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGCT......................................................................................................2520.501100000
...................TCATCTGG------TAGAGTAGGTCGTC........................................................................................................................................................2280.504040000
...................................................................CTATGTCCTGTAC-----GCGGTTCCTGC.......................................................................................................2420.501001000
...................................................................CTATGTCCTGTAC-----GCGGTTCCT.........................................................................................................2220.501100000
...................TCATCTGG------TAGAGTAGGTCGTCCAGA....................................................................................................................................................2680.504040000
....................................................................TATGTCCTGTAC-----GCGGTTCC..........................................................................................................2030.331010000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTCC.....................................................2370.292020000
....................CATCTGG------TAGAGTAGGTCGTCCAG.....................................................................................................................................................2480.252020000
.....................................................................................GCGGTTCCTGCTTCGCTTGGGGG...........................................................................................2340.251010000
...................TCATCTGG------TAGAGTAGGTCGTCCAGAAT..................................................................................................................................................2880.252020000
...................TCATCTGG------TAGAGTAGGTCGTCCAGAA...................................................................................................................................................2780.252020000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTCCCTC..................................................2670.141001000
..............................................................................................................................TCGATGGTGTAGGGGGGTCCA....................................................2170.141010000
...............................................................................................................................CGATGGTGTAGGGGGGTCCCTCG.................................................2370.141010000
...........................................................................................................................TACTCGATGGTGTAGGGGGGT.......................................................2170.141010000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTC......................................................2270.141010000
...........................................................................................................................TACTCGATGGTGTAGGGGGGTCCC....................................................2470.141010000
.................GTTCATCTGG------TAGAGTAGGTCGTCCA......................................................................................................................................................2680.131010000
........................................................................................................................CGCTACTCGATGGTGTAGGGG..........................................................2180.131010000
...................TCATCTGG------TAGAGTAGGTCGTCA.......................................................................................................................................................2380.131010000
..................TTCATCTGG------TAGAGTAGGTCGTCC.......................................................................................................................................................2480.131010000
...........................................................................................................................TACTCGATGGTGTAGGGGG.........................................................1980.131010000
...................TCATCTGG------TAGAGTAGGTCG..........................................................................................................................................................2080.131010000
............TTCTCGTTCATCTGG------TAGAGTAGGTC...........................................................................................................................................................2680.131010000
...................TCATCTGG------TAGAGTAGGTCGT.........................................................................................................................................................2180.131100000
....................CATCTGG------TAGAGTAGGTCGTCCAGA....................................................................................................................................................2580.131010000
....................CATCTGG------TAGAGTAGGTCGTCCA......................................................................................................................................................2380.131010000
...............................................................................................................TTTTTCTCCCGCTACTCGATGGTGT...............................................................2590.111010000
...........................................................................................................................TACTCGATGGTGTAGGGA..........................................................18100.101001000
droVir3
TGCCTCATATCTGGCTGCTTGCCATGATACATGAACAGTAGCTCGTCCAGTATCGAGCCAATCTCTTCGATCTCCT-----------GGGTATTGCCTTGCTCTTCT--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................TGATACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................2620103.30206600780902401001825140000000004512337103952000022180301206171000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCA......................................................................................................................................................252047.8095600200430601001128210000000001543111122020015316411410367129000000000000000000001000
........................TGATACATGAACAGTAGCTCGTCCAGT....................................................................................................................................................272020.70414000013000000290000000000320900000013003861743733000000000100000000002000
........................TGATACATGAACAGTAGCTCGTCCAGTA...................................................................................................................................................282011.402280090200000001000000000001107069000014002701411000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCC.......................................................................................................................................................24206.001200092700000001000000000001414191100000041601013000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAGTA...................................................................................................................................................25203.0561001030000000000000000001015000000201714611000000000000000000000000
........................TGATACATGAACAGTAGCTCGTC........................................................................................................................................................23202.6553004030000000000000000001379600002023525100000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAGTAT..................................................................................................................................................26201.70340020400000000000000000003001000080000115000000000000000000000000
........................TGATACATGAACAGTAGCTC...........................................................................................................................................................20201.35270000202000000000000000030101000020320110000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCC......................................................................................................................................................25201.05210000300000000000000000020000000001000015000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGGTATTGCC......................................................................................................2511.001000000000000000000000001000000000000000000000000000000000000000
........................................................................TCCT-----------GGGTATTGCCTTGCTCT...............................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.......................................................................CTCCT-----------GGGTATTGCCTTGCTCTTCT--------------------------------------------------------------------------------------------2511.001000000000000000000000000000100000000000000000000000000000000000
...............................................................TCTTCGATCTCCT-----------GGGTATTGCCT.....................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
......................................................................TCTCCT-----------GGGTATTGCCTTGCTCTTC.............................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGGTAT..........................................................................................................21200.7515002010400000000000000000200200001001020000000000000000000000000
...............................TGAACAGTAGCTCGTCCAGTATCGAGC.............................................................................................................................................27200.60120011000000000000000000000000000001000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGT.........................................................................................................................................................22200.5511001000000000000000000001201100000010102000000000000000000001000
...........................TACATGAACAGTAGCTCGTCCAGT....................................................................................................................................................24200.5010003000000000000000000000101000000002021000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGTAT..................................................................................................................................................29200.459004010000000000000000000022000000000000000000000000000000000000
......................CATGATACATGAACAGTAGCTCGTCCA......................................................................................................................................................27200.459000000000000000000000000100000002000015000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGGTATT.........................................................................................................22200.408001100000000000000000000101000000002200000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................23200.357002010000000000000000000000000000002200000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCA......................................................................................................................................................22200.357100000000000000000000001000000000001013000000000000000000000000
..........................ATACATGAACAGTAGCTCGTCCAGTA...................................................................................................................................................26200.357001000000000000000000000000200001002100000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAA.....................................................................................................................................................26200.357000010000000000000000000010300000000011000000000000000000000000
..........................ATACATGAACAGTAGCTCGTCCAGT....................................................................................................................................................25200.306000000000000000000000000010000000002012000000000000000000000000
.......................ATGATACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................27200.306001000000000000000000000110000000000111000000000000000000000000
..............................ATGAACAGTAGCTCGTCCAG.....................................................................................................................................................20200.306000000000000000000000001002100000000020000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAGTATCG................................................................................................................................................28200.306000000000000000000000000101000001002001000000000000000000000000
..........................ATACATGAACAGTAGCTCGTCCAGTAT..................................................................................................................................................27200.255000000000000000000000000000000000005000000000000000000000000000
......................CATGATACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................28200.255000000000000000000000000200000003000000000000000000000000000000
........................TGATACATGAACAGTAGCTCG..........................................................................................................................................................21200.204000000000000000000000001011100000000000000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGGTA...........................................................................................................20200.204000000000000200000000000000000000000200000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGGT............................................................................................................19200.204000000200000000000000000002000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGTT...................................................................................................................................................28200.204000000000000100000000000000000000010020000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGA....................................................................................................................................................27200.204000000000000000000000000000100000002010000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAT.....................................................................................................................................................26200.153000000000000100000000000000100000000100000000000000000000000000
.........................GATACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................25200.153003000000000000000000000000000000000000000000000000000000000000
.........................GATACATGAACAGTAGCTCGTCCAGT....................................................................................................................................................26200.153001000200000000000000000000000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCG......................................................................................................................................................25200.153000000000000000000000000100000000000101000000000000000000000000
...................TGCCATGATACATGAACAGTAGCTCGT.........................................................................................................................................................27200.153000000000000000000000000100200000000000000000000000000000000000
................................GAACAGTAGCTCGTCCAGTATCGAGC.............................................................................................................................................26200.153003000000000000000000000000000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGC....................................................................................................................................................27200.153000210000000000000000000000000000000000000000000000000000000000
...........................TACATGAACAGTAGCTCGTCC.......................................................................................................................................................21200.153002000000000000000000001000000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAAA....................................................................................................................................................27200.102000000000000000000000000000000001001000000000000000000000000000
............................ACATGAACAGTAGCTCGTCCAGT....................................................................................................................................................23200.102001000000001000000000000000000000000000000000000000000000000000
...............................TGAACAGTAGCTCGTCCAGTATCGA...............................................................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
..............................ATGAACAGTAGCTCGTCCA......................................................................................................................................................19200.102000000001000000000000000100000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCT......................................................................................................................................................25200.102000000000000000000000000000000000000002000000000000000000000000
.........................GATACATGAACAGTAGCTCGTCCA......................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
...............................TGAACAGTAGCTCGTCCAGTATCGAG..............................................................................................................................................26200.102001000000000000000000000010000000000000000000000000000000000000
.........................GATACATGAACAGTAGCTCGTCC.......................................................................................................................................................23200.102001010000000000000000000000000000000000000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAGTATC.................................................................................................................................................27200.102000000000000000000000000000000001000010000000000000000000000000
........................TGATACATGAACAGTAGCT............................................................................................................................................................19200.102000000000000000000000000000200000000000000000000000000000000000
.......................ATGATACATGAACAGTAGCTCGTCCA......................................................................................................................................................26200.102000000000000000000000000101000000000000000000000000000000000000
...............................TGAACAGTAGCTCGTCCAG.....................................................................................................................................................19200.102000020000000000000000000000000000000000000000000000000000000000
.............................CATGAACAGTAGCTCGTCCA......................................................................................................................................................20200.102000000000000000000000000000000000001001000000000000000000000000
...............TGCTTGCCATGATACATGAACAGTAGC.............................................................................................................................................................27200.102002000000000000000000000000000000000000000000000000000000000000
..........................................................CAATCTCTTCGATCTCCT-----------GGGT............................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
.................CTTGCCATGATACATGAACAGTAGC.............................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...............................TGAACAGTAGCTCGTCCAGTATCGAA..............................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
...........................TACATGAACAGTAGCTCGTC........................................................................................................................................................20200.051000010000000000000000000000000000000000000000000000000000000000
.....................CCATGATACATGAACAGTAGCTCGTCC.......................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.............................CATGAACAGTAGCTCGTCCAG.....................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
.............................................................TCTCTTCGATCTCCT-----------GGG.............................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..........................ATACATGAACAGTAGCTCGTCCAG.....................................................................................................................................................24200.051000000000000000000000000000000000000001000000000000000000000000
..............................ATGAACAGTAGCTCGTCCAGTA...................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGTC...................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
...........TGGCTGCTTGCCATGATACATGAACAGT................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
............................................................ATCTCTTCGATCTCCT-----------GGGTATT.........................................................................................................23200.051000000100000000000000000000000000000000000000000000000000000000
..............................ATGAACAGTAGCTCGTCCAGTATCGA...............................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
..............................ATGAACAGTAGCTCGTCCAGTATCGAG..............................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
..............................ATGAACAGTAGCTCGTCCAGT....................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
....................GCCATGATACATGAACAGTAGCTCG..........................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCA.......................................................................................................................................................24200.051000000000000000000000000000000000000001000000000000000000000000
........................TGATACATGAACAGTAGC.............................................................................................................................................................18200.051000000000000000000000000000000000000001000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAGG....................................................................................................................................................27200.051000000000000100000000000000000000000000000000000000000000000000
.....................................................CGAGCCAATCTCTTCGATCTCC............................................................................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTTT.......................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAAAT...................................................................................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
....................GCCATGATACATGAACAGTAGCTC...........................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000100
........................................................GCCAATCTCTTCGATCTCCT-----------GGGTA...........................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
..............................................CCAGTATCGAGCCAATCTCTTCGATC...............................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................TCTTCGATCTCCT-----------GGGTATT.........................................................................................................20200.051000010000000000000000000000000000000000000000000000000000000000
...........................TACATGAACAGTAGCTCGTCCAGTATA.................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
...........................................CGTCCAGTATCGAGCCAATCTCTTCGA.................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
..................................ACAGTAGCTCGTCCAGTAT..................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCAC.....................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
............................................................ATCTCTTCGATCTCCT-----------GGGTAT..........................................................................................................22200.051000000000000000000000000000000000000001000000000000000000000000
..................................ACAGTAGCTCGTCCAGTA...................................................................................................................................................18200.051000000000000000000000000010000000000000000000000000000000000000
...................TGCCATGATACATGAACAGTAGCTCG..........................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCGTCCACA....................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
...............................TGAACAGTAGCTCGTCCAGT....................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
........................TGATACATGAACAGTAGCTCCAG........................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
..................TTGCCATGATACATGAACAGTAGCTCGT.........................................................................................................................................................28200.051000010000000000000000000000000000000000000000000000000000000000
..........................ATACATGAACAGTAGCTCCAG........................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
..............................................CCAGTATCGAGCCAATCTCTTCGAT................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................TTCGATCTCCT-----------GGGTATT.........................................................................................................18200.051000010000000000000000000000000000000000000000000000000000000000
......................CATGATACATGAACAGTAGCTCGTCC.......................................................................................................................................................26200.051000000000000000000000000000000000000001000000000000000000000000
................................GAACAGTAGCTCGTCCAG.....................................................................................................................................................18200.051000000000000000000000000000100000000000000000000000000000000000
............................................GTCCAGTATCGAGCCAATCTCTTCGA.................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
.........................GATACATGAACAGTAGCTCGTCCAGTA...................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
...........TGGCTGCTTGCCATGATACATGAACAG.................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
......................CATGATACATGAACAGTAGCTCGTCCT......................................................................................................................................................27200.051000000000000100000000000000000000000000000000000000000000000000

Generated: 05/15/2015 at 02:50 PM