ID:

dse_21

 Coordinate:

scaffold_11:2578694-2578758 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.7 -29.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTGTTCTCAGTTATCCTCGAGGATTTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCAATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAACACCCGTTAACATCAGACTGCCAAGTGCACTTTCAGTGGAGTTAT

***********************************((.((((..((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))..))))))....************************************ 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V113

male body		 V115

head
............................................................................................TGAGATTCTTCTATTCTACTTT................................................... 22 0 1 121290.00 121290 119374 1485 362 69
.............................................................................................GAGATTCTTCTATTCTACTTT................................................... 21 0 1 9144.00 9144 9141 1 2 0
............................................................................................TGAGATTCTTCTATTCTACTT.................................................... 21 0 1 9058.00 9058 8884 76 78 20
..................................................AGTAGAATAGCAGGCTTATCACA............................................................................................ 23 0 1 8937.00 8937 2258 4692 1772 215
..................................................AGTAGAATAGCAGGCTTATCAC............................................................................................. 22 0 1 1408.00 1408 489 482 340 97
..............................................................................................AGATTCTTCTATTCTACTTT................................................... 20 0 1 1124.00 1124 1124 0 0 0
............................................................................................TGAGATTCTTCTATTCTACT..................................................... 20 0 1 802.00 802 754 23 20 5
.............................................................................................GAGATTCTTCTATTCTACTT.................................................... 20 0 1 665.00 665 665 0 0 0
....................................................TAGAATAGCAGGCTTATCACA............................................................................................ 21 0 1 659.00 659 68 426 155 10
............................................................................................TTAGATTCTTCTATTCTACTTT................................................... 22 1 1 601.00 601 601 0 0 0
............................................................................................TGAGCTTCTTCTATTCTACTTT................................................... 22 1 1 592.00 592 588 2 2 0
............................................................................................TGAGATTCTTCTATTCTCCTTT................................................... 22 1 1 521.00 521 520 1 0 0
..................................................AGTAGAATAGCAGGCTTATCA.............................................................................................. 21 0 1 515.00 515 248 59 196 12
............................................................................................TGAGATTCTTCTATTCTACTGT................................................... 22 1 1 476.00 476 476 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTT.................................................. 23 1 1 463.00 463 455 4 1 3
............................................................................................TGAGATTCTTATATTCTACTTT................................................... 22 1 1 308.00 308 307 1 0 0
............................................................................................TGAGATTATTCTATTCTACTTT................................................... 22 1 1 282.00 282 280 1 1 0
............................................................................................TGATATTCTTCTATTCTACTTT................................................... 22 1 1 274.00 274 271 1 2 0
...........................................................................................CTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 230.00 230 229 1 0 0
............................................................................................TGAGATTCTTCTATTTTACTTT................................................... 22 1 1 223.00 223 211 12 0 0
............................................................................................TGACATTCTTCTATTCTACTTT................................................... 22 1 1 181.00 181 179 1 1 0
...............................................................................................GATTCTTCTATTCTACTTT................................................... 19 0 1 179.00 179 179 0 0 0
...................................................GTAGAATAGCAGGCTTATCACA............................................................................................ 22 0 1 171.00 171 166 5 0 0
............................................................................................TGAGATTTTTCTATTCTACTTT................................................... 22 1 1 164.00 164 163 1 0 0
....................................................TAGAATAGCAGGCTTATCAC............................................................................................. 20 0 1 162.00 162 27 118 16 1
............................................................................................TGAGATTCTTCTATTCTACTTTA.................................................. 23 1 1 152.00 152 150 2 0 0
..................................................AGTAGAATAGCAGGCTTATC............................................................................................... 20 0 1 148.00 148 64 27 52 5
............................................................................................TGGGATTCTTCTATTCTACTTT................................................... 22 1 1 147.00 147 144 3 0 0
..............................................................................................TGATTCTTCTATTCTACTTT................................................... 20 1 1 143.00 143 142 1 0 0
...........................................................................................ATGAGATTCTTCTATTCTACTTT................................................... 23 1 1 124.00 124 124 0 0 0
............................................................................................GGAGATTCTTCTATTCTACTTT................................................... 22 1 1 119.00 119 118 1 0 0
............................................................................................TGAGATTCTTCCATTCTACTTT................................................... 22 1 1 115.00 115 112 2 1 0
............................................................................................AGAGATTCTTCTATTCTACTTT................................................... 22 1 1 112.00 112 112 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGTT................................................... 22 1 1 95.00 95 95 0 0 0
...........................................................................................GTGAGATTCTTCTATTCTACTTT................................................... 23 0 1 95.00 95 95 0 0 0
............................................................................................TGAAATTCTTCTATTCTACTTT................................................... 22 1 1 92.00 92 92 0 0 0
................................................................................................ATTCTTCTATTCTACTTT................................................... 18 0 1 78.00 78 78 0 0 0
............................................................................................TGAGATTCTTCTACTCTACTTT................................................... 22 1 1 77.00 77 75 2 0 0
...........................................................................................TTGAGATTCTTCTATTCTACTTT................................................... 23 1 1 77.00 77 77 0 0 0
............................................................................................TGAGATTCTTCTATTCTAC...................................................... 19 0 1 73.00 73 44 25 1 3
............................................................................................TGAGATTCTTCTATTCTACTTTG.................................................. 23 1 1 73.00 73 73 0 0 0
............................................................................................CGAGATTCTTCTATTCTACTTT................................................... 22 1 2 73.00 146 145 1 0 0
............................................................................................TGAGACTCTTCTATTCTACTTT................................................... 22 1 1 72.00 72 72 0 0 0
............................................................................................TAAGATTCTTCTATTCTACTTT................................................... 22 1 1 70.00 70 69 1 0 0
............................................................................................TGAGATTCTTCTATCCTACTTT................................................... 22 1 1 69.00 69 68 1 0 0
............................................................................................TGAGATTCCTCTATTCTACTTT................................................... 22 1 1 67.00 67 62 4 1 0
............................................................................................TGAGATTCTTCTATTCTACCTT................................................... 22 1 1 58.00 58 56 1 0 1
............................................................................................TGAGGTTCTTCTATTCTACTTT................................................... 22 1 1 58.00 58 57 1 0 0
............................................................................................TGAGATTCTTCTAGTCTACTTT................................................... 22 1 1 56.00 56 55 1 0 0
.............................................................................................GAGCTTCTTCTATTCTACTTT................................................... 21 1 1 54.00 54 54 0 0 0
.............................................................................................GATATTCTTCTATTCTACTTT................................................... 21 1 1 52.00 52 52 0 0 0
............................................................................................TGAGATTCTTCTATTCTCCTT.................................................... 21 1 1 51.00 51 51 0 0 0
............................................................................................TGAGATTGTTCTATTCTACTTT................................................... 22 1 1 51.00 51 51 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTC................................................... 22 1 1 50.00 50 49 1 0 0
............................................................................................TGAGAGTCTTCTATTCTACTTT................................................... 22 1 1 50.00 50 50 0 0 0
..................................................AGTAGAATAGCAGGCTTAT................................................................................................ 19 0 1 48.00 48 25 16 7 0
............................................................................................TCAGATTCTTCTATTCTACTTT................................................... 22 1 1 48.00 48 46 2 0 0
............................................................................................TGAGATTCTTCTATTCTAGTTT................................................... 22 1 1 48.00 48 47 0 1 0
............................................................................................TGAGATTCTCCTATTCTACTTT................................................... 22 1 1 47.00 47 43 4 0 0
.............................................................................................GAGATTCTTCTATTCTACT..................................................... 19 0 1 46.00 46 46 0 0 0
............................................................................................TGAGATTCTTATATTCTACTGT................................................... 22 2 1 46.00 46 46 0 0 0
............................................................................................TGAGATTCTTTTATTCTACTTT................................................... 22 1 1 44.00 44 36 8 0 0
............................................................................................TGAGATTCTTCTATTCGACTTT................................................... 22 1 1 43.00 43 43 0 0 0
.........................................................................TGTTCAATTCAATCTGCTG......................................................................... 19 0 1 41.00 41 14 27 0 0
............................................................................................TGAGAATCTTCTATTCTACTTT................................................... 22 1 1 41.00 41 41 0 0 0
..............................................................................................AGATTCTTCTATTCTACTT.................................................... 19 0 1 41.00 41 41 0 0 0
............................................................................................TGAGATTCTTCTAATCTACTTT................................................... 22 1 1 41.00 41 38 3 0 0
............................................................................................TGAGTTTCTTCTATTCTACTTT................................................... 22 1 1 40.00 40 39 0 1 0
.............................................................................................TAGATTCTTCTATTCTACTTT................................................... 21 1 1 40.00 40 40 0 0 0
............................................................................................TGAGCTTCTTCTATTCTACTT.................................................... 21 1 1 39.00 39 39 0 0 0
.............................................................................................GAGATTATTCTATTCTACTTT................................................... 21 1 1 39.00 39 39 0 0 0
...................................................GTAGAATAGCAGGCTTATCAC............................................................................................. 21 0 1 38.00 38 38 0 0 0
............................................................................................TGAGATTCTTCTATTCCACTTT................................................... 22 1 1 38.00 38 35 2 1 0
............................................................................................TTAGATTCTTCTATTCTACTT.................................................... 21 1 1 38.00 38 38 0 0 0
............................................................................................TGAGATTCTTCTATTCTTCTTT................................................... 22 1 1 37.00 37 31 6 0 0
............................................................................................TGAGATTCTTCGATTCTACTTT................................................... 22 1 1 37.00 37 37 0 0 0
............................................................................................TGAGATACTTCTATTCTACTTT................................................... 22 1 1 35.00 35 35 0 0 0
............................................................................................TGAGATTCTTCTATTTTACTGT................................................... 22 2 1 34.00 34 34 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTG.................................................... 21 1 1 34.00 34 34 0 0 0
............................................................................................TGAGATTCTTCTATGCTACTTT................................................... 22 1 1 34.00 34 34 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTTG................................................... 21 1 1 34.00 34 34 0 0 0
............................................................................................TGAGATCCTTCTATTCTACTTT................................................... 22 1 1 33.00 33 32 1 0 0
............................................................................................TGAGATTCATCTATTCTACTTT................................................... 22 1 1 30.00 30 30 0 0 0
............................................................................................TGAGATTCTTCTTTTCTACTTT................................................... 22 1 1 29.00 29 29 0 0 0
....................................................TAGAATAGCAGGCTTATCA.............................................................................................. 19 0 1 29.00 29 11 14 2 2
............................................................................................TGAGATTCTTCTATTCTACTTTC.................................................. 23 0 1 29.00 29 28 0 1 0
............................................................................................TGAGATTCTTCTATTCGACTGT................................................... 22 2 1 28.00 28 28 0 0 0
............................................................................................TGAGATTCTTCTGTTCTACTTT................................................... 22 1 1 27.00 27 24 3 0 0
............................................................................................TGAGATTCTTCAATTCTACTTT................................................... 22 1 1 27.00 27 27 0 0 0
..................................................ATTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 27.00 27 20 4 3 0
............................................................................................TGAGATTCTGCTATTCTACTTT................................................... 22 1 1 26.00 26 26 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTA................................................... 22 1 1 25.00 25 25 0 0 0
..................................................AGTAGAATAGCAGGCTTACCACA............................................................................................ 23 1 1 25.00 25 1 9 15 0
............................................................................................TGAGATTCTTCTATTCTACTTG................................................... 22 1 1 25.00 25 25 0 0 0
....................................................TAGAATAGCAGGCTTATCACATG.......................................................................................... 23 0 1 25.00 25 5 17 3 0
.............................................................................................GAGATTCTTCTATTCTACTTTT.................................................. 22 1 1 24.00 24 24 0 0 0
............................................................................................TGAGATTATTCTATTCTACTT.................................................... 21 1 1 24.00 24 24 0 0 0
............................................................................................TGAGATTCTTATATTCTACGTT................................................... 22 2 1 23.00 23 23 0 0 0
.............................................................................................GGGATTCTTCTATTCTACTTT................................................... 21 1 1 21.00 21 21 0 0 0
............................................................................................TGAGATTCTTATATTTTACTTT................................................... 22 2 1 20.00 20 20 0 0 0
............................................................................................TGAGATTCTTCTATACTACTTT................................................... 22 1 1 20.00 20 18 2 0 0
............................................................................................TGAGATTCTTCTATTCTA....................................................... 18 0 1 18.00 18 10 8 0 0
............................................................................................TGAGATTCTTCTATTGTACTTT................................................... 22 1 1 18.00 18 17 1 0 0
............................................................................................TGATATTCTTCTATTCTACTT.................................................... 21 1 1 18.00 18 18 0 0 0
............................................................................................TGAGATTCTTATATTCTACTT.................................................... 21 1 1 18.00 18 18 0 0 0
...................................................GTAGAATAGCAGGCTTATCA.............................................................................................. 20 0 1 18.00 18 18 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACG............................................................................................ 23 1 1 17.00 17 2 9 5 1
..................................................AGTAGAATACCAGGCTTATCACA............................................................................................ 23 1 1 17.00 17 7 8 2 0
............................................................................................TGAGATTCTTCTATTTTACTT.................................................... 21 1 1 17.00 17 17 0 0 0
............................................................................................TGAGATTCTTCTATTCTGCTTT................................................... 22 1 1 17.00 17 16 1 0 0
..................................................AGTCGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 17.00 17 13 3 1 0
..................................................AGTAAAATAGCAGGCTTATCACA............................................................................................ 23 1 1 17.00 17 13 3 1 0
............................................................................................TGTGATTCTTCTATTCTACTTT................................................... 22 1 1 16.00 16 16 0 0 0
.............................................................................................GAGATTCTTCTTTTCTACTTT................................................... 21 1 1 16.00 16 16 0 0 0
..................................................AGTAGAATAGCAGGCTTAACACA............................................................................................ 23 1 1 16.00 16 0 2 14 0
.............................................................................................GAGTTTCTTCTATTCTACTTT................................................... 21 1 1 16.00 16 16 0 0 0
..................................................AGCAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 16.00 16 2 9 5 0
...........................................................................................CTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 15.00 15 15 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTCT................................................... 22 1 1 15.00 15 13 1 0 1
.............................................................................................GAGATTCTTCTATTTTACTTT................................................... 21 1 1 15.00 15 15 0 0 0
............................................................................................TGAGATTCTTGTATTCTACTTT................................................... 22 1 1 15.00 15 15 0 0 0
.............................................................................................GAGACTCTTCTATTCTACTTT................................................... 21 1 1 15.00 15 15 0 0 0
..................................................AGTAGAATAGCAGGCTTATCGCA............................................................................................ 23 1 1 15.00 15 5 8 2 0
.................................................AAGTAGAATAGCAGGCTTATCACA............................................................................................ 24 0 1 15.00 15 7 6 2 0
.............................................................................................GAGATTCTTCTATTCTAATTT................................................... 21 1 2 14.50 29 29 0 0 0
..................................................AGTAGAATAGCAGGTTTATCACA............................................................................................ 23 1 1 14.00 14 3 10 1 0
..................................................AGTAGAATATCAGGCTTATCACA............................................................................................ 23 1 1 14.00 14 7 3 4 0
............................................................................................TGAGATTCTTCTATTCTACTTTAA................................................. 24 2 1 14.00 14 14 0 0 0
............................................................................................TGAGATTCTTCTATTATACTTT................................................... 22 1 1 13.00 13 12 1 0 0
..................................................AGTAGAATAGCAGGCTTA................................................................................................. 18 0 1 13.00 13 6 5 1 1
..................................................AGTAGAATAGCAGGCTTATCACAT........................................................................................... 24 0 1 13.00 13 5 1 6 1
..............................................................................................AGATTCTTATATTCTACTTT................................................... 20 1 1 13.00 13 13 0 0 0
.............................................................................................GACATTCTTCTATTCTACTTT................................................... 21 1 1 13.00 13 13 0 0 0
..................................................AGTAGAATAGCAGGCCTATCACA............................................................................................ 23 1 1 13.00 13 2 7 4 0
............................................................................................TGAGATTCTTCTGTTCTCCTTT................................................... 22 2 1 13.00 13 13 0 0 0
............................................................................................TGAGATTCTTCTATTCTACTTTGG................................................. 24 1 1 12.00 12 12 0 0 0
............................................................................................TGAGATTCTTCCATTCTACTT.................................................... 21 1 1 12.00 12 11 1 0 0
.............................................................................................GAGATTCTTCTATTCTACTTTA.................................................. 22 1 1 12.00 12 12 0 0 0
..................................................AGTAGAGTAGCAGGCTTATCACA............................................................................................ 23 1 1 11.00 11 0 10 1 0
..................................................AGTAGAATAGCAGGCTTATCACAA........................................................................................... 24 1 1 11.00 11 4 5 2 0
..................................................AGTAGAATAGCGGGCTTATCACA............................................................................................ 23 1 1 11.00 11 0 8 3 0
..................................................TGTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 11.00 11 7 4 0 0
............................................................................................TGCGATTCTTCTATTCTACTTT................................................... 22 1 1 11.00 11 9 2 0 0
.............................................................................................CAGATTCTTCTATTCTACTTT................................................... 21 1 1 11.00 11 11 0 0 0
.............................................................................................GAGGTTCTTCTATTCTACTTT................................................... 21 1 1 11.00 11 11 0 0 0
..................................................AGTAGAACAGCAGGCTTATCACA............................................................................................ 23 1 1 11.00 11 6 3 1 1
..................................................AGTAGAATAGCAGGCTTATCACT............................................................................................ 23 1 1 11.00 11 3 1 7 0
............................................................................................TGAGATTCTTCTATTCTAATTT................................................... 22 1 1 11.00 11 5 0 6 0
..................................................AGTAGACTAGCAGGCTTATCACA............................................................................................ 23 1 1 11.00 11 10 1 0 0
............................................................................................TGAGATTCTTCTATTCTATTTT................................................... 22 1 2 10.50 21 12 6 3 0
............................................................................................AGAGATTCTTCTATTCTACTT.................................................... 21 1 1 10.00 10 10 0 0 0
............................................................................................TGAGATTCTACTATTCTACTTT................................................... 22 1 1 10.00 10 10 0 0 0
..................................................AGGAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 10.00 10 8 1 1 0
.............................................................................................GTGATTCTTCTATTCTACTTT................................................... 21 1 1 10.00 10 10 0 0 0
...........................................................................................ATGAGATTCTTCTATTCTACTT.................................................... 22 1 1 10.00 10 10 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGT.................................................... 21 1 1 10.00 10 10 0 0 0
..............................................................................................TGATTCTTCTATTCTACTT.................................................... 19 1 1 10.00 10 10 0 0 0
..................................................AGTAGAATCGCAGGCTTATCACA............................................................................................ 23 1 1 10.00 10 8 2 0 0
..................................................AGTAGAATAGAAGGCTTATCACA............................................................................................ 23 1 1 10.00 10 6 3 1 0
..................................................AGTAGAATAGTAGGCTTATCACA............................................................................................ 23 1 1 10.00 10 2 7 1 0
..................................................AGTTGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 10.00 10 1 9 0 0
.................................................CAGTAGAATAGCAGGCTTATCACA............................................................................................ 24 1 1 10.00 10 3 7 0 0
..................................................AGTAGAATAGCAGGCTTATCCCA............................................................................................ 23 1 1 10.00 10 0 6 4 0
............................................................................................TGACATTCTTCTATTCTACTT.................................................... 21 1 1 10.00 10 10 0 0 0
.............................................................................................GAGATTCTTCCATTCTACTTT................................................... 21 1 1 9.00 9 9 0 0 0
............................................................................................TGGGATTCTTCTATTCTACTT.................................................... 21 1 1 9.00 9 8 0 1 0
..................................................AGTAGAATAGCAGGCTTATTACA............................................................................................ 23 1 1 9.00 9 2 6 1 0
...........................................................................................TTGAGATTCTTCTATTCTACTT.................................................... 22 1 1 9.00 9 9 0 0 0
............................................................................................TGAGATTCTTCTACTCTACTT.................................................... 21 1 1 9.00 9 9 0 0 0
.............................................................................................GAGATTCTTCTATTCTACGTT................................................... 21 1 1 9.00 9 9 0 0 0
............................................................................................TGAGATTATTATATTCTACTTT................................................... 22 2 1 9.00 9 9 0 0 0
..................................................AGTAGAATAGCAGGCTTATCAAA............................................................................................ 23 1 1 8.00 8 0 7 1 0
....................................................TAGAATAGCAGGCTTATCACAT........................................................................................... 22 0 1 8.00 8 1 3 4 0
.............................................................................................GAGATTCCTCTATTCTACTTT................................................... 21 1 1 8.00 8 8 0 0 0
..................................................AATAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 8.00 8 1 4 2 1
..................................................ATTAGAATAGCAGGCTTATCAC............................................................................................. 22 1 1 8.00 8 6 1 1 0
............................................................................................TTAGATTCTTCTATTCTACT..................................................... 20 1 1 8.00 8 8 0 0 0
..................................................AGTAGAATAGCAGGCTTCTCACA............................................................................................ 23 1 1 8.00 8 8 0 0 0
..................................................AGTAGGATAGCAGGCTTATCACA............................................................................................ 23 1 1 8.00 8 0 6 2 0
..........................................................................................ATTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 8.00 8 8 0 0 0
.............................................................................................GAGATTCTTCTATTCCACTTT................................................... 21 1 1 8.00 8 8 0 0 0
..................................................GGTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 8.00 8 0 7 1 0
............................................................................................TGACCTTCTTCTATTCTACTTT................................................... 22 2 1 8.00 8 8 0 0 0
............................................................................................TAAGATTCTTCTATTCTACTT.................................................... 21 1 1 8.00 8 8 0 0 0
............................................................................................CGAGATTCTTCTATTCTACTT.................................................... 21 1 2 7.50 15 14 0 1 0
............................................................................................TGAGATTCTTATATTCTACTTC................................................... 22 2 1 7.00 7 7 0 0 0
..........................................................................................TGTGAGATTCTTCTATTCTACT..................................................... 22 0 1 7.00 7 2 4 1 0
.....................................................AGAATAGCAGGCTTATCACA............................................................................................ 20 0 1 7.00 7 2 4 1 0
............................................................................................TGAGATTTTTCTATTCTACTT.................................................... 21 1 1 7.00 7 7 0 0 0
..................................................AGTAGAATAGCAGGCTTAGCACA............................................................................................ 23 1 1 7.00 7 3 0 4 0
.............................................................................................AAGATTCTTCTATTCTACTTT................................................... 21 1 1 7.00 7 7 0 0 0
............................................................................................TGAGATTCTTATATTCGACTTT................................................... 22 2 1 7.00 7 7 0 0 0
..................................................AGTAGAATAGCATGCTTATCACA............................................................................................ 23 1 1 7.00 7 2 3 1 1
.................................................AAGTAGAATAGCAGGCTTATCAC............................................................................................. 23 0 1 7.00 7 3 4 0 0
............................................................................................TGAGATTATTCTATTCTACTTC................................................... 22 2 1 7.00 7 7 0 0 0
..................................................AGTAGAATAGCTGGCTTATCACA............................................................................................ 23 1 1 7.00 7 6 1 0 0
..................................................AGTAGAATAGCAGGATTATCACA............................................................................................ 23 1 1 7.00 7 0 7 0 0
..................................................ACTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 7.00 7 0 5 1 1
...........................................................................................GTGAGATTCTTCTATTCTACTT.................................................... 22 0 1 7.00 7 7 0 0 0
..................................................AGTAGAATAGCAGCCTTATCACA............................................................................................ 23 1 1 7.00 7 2 4 1 0
..................................................AGTACAATAGCAGGCTTATCACA............................................................................................ 23 1 1 6.00 6 3 2 1 0
.............................................................................................GAGATTCTTCTATTCTACCTT................................................... 21 1 1 6.00 6 6 0 0 0
..................................................AGTAGAATAGCAGTCTTATCACA............................................................................................ 23 1 1 6.00 6 1 4 1 0
..................................................AGTAGTATAGCAGGCTTATCACA............................................................................................ 23 1 1 6.00 6 2 3 1 0
....................................................TAGAATAGCAGGCTTATC............................................................................................... 18 0 1 6.00 6 0 5 0 1
............................................................................................TGAGATTCTTCTATTCTACTTTGGTC............................................... 26 2 1 6.00 6 0 6 0 0
............................................................................................TGAGATTCTTCTATTCTACATT................................................... 22 1 1 6.00 6 6 0 0 0
..........................................................................................GTTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 6.00 6 6 0 0 0
............................................................................................TGAGATTCTTCTGTTCTACTT.................................................... 21 1 1 6.00 6 6 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACC............................................................................................ 23 1 1 6.00 6 1 4 1 0
..................................................AGTAGAATAGCAGGCATATCACA............................................................................................ 23 1 1 6.00 6 2 4 0 0
..................................................AGTAGAATAGCAGGCTCATCACA............................................................................................ 23 1 1 6.00 6 0 6 0 0
..................................................AGTAGAATGGCAGGCTTATCACA............................................................................................ 23 1 1 6.00 6 0 4 2 0
............................................................................................TGAGATTCTTCTATTCTACTAT................................................... 22 1 1 6.00 6 5 1 0 0
.............................................................................................GAGATTCTTCTATCCTACTTT................................................... 21 1 1 6.00 6 6 0 0 0
............................................................................................TTAGATTCTTATATTCTACTTT................................................... 22 2 1 6.00 6 6 0 0 0
............................................................................................TGGTATTCTTCTATTCTACTTT................................................... 22 2 1 6.00 6 6 0 0 0
.............................................................................................TAGATTCTTCTATTCTACTT.................................................... 20 1 1 6.00 6 6 0 0 0
............................................................................................TGAGATTATTCTATTCTACTTA................................................... 22 2 1 6.00 6 6 0 0 0
............................................................................................TGAGATTCTTCGATTCTACTT.................................................... 21 1 1 6.00 6 6 0 0 0
..............................................................................................ATATTCTTCTATTCTACTTT................................................... 20 1 2 5.50 11 11 0 0 0
............................................................................................TGAACTTCTTCTATTCTACTTT................................................... 22 2 1 5.00 5 5 0 0 0
..................................................AGTAGAATAGCAGGCTTATCT.............................................................................................. 21 1 1 5.00 5 2 0 3 0
.................................................AAGTAGAATAGCAGGCTTATCA.............................................................................................. 22 0 1 5.00 5 3 1 1 0
.............................................................................................GAGATTCTTCTATTCTACTTTG.................................................. 22 1 1 5.00 5 5 0 0 0
.............................................................................................GATATTCTTCTATTCTACTT.................................................... 20 1 1 5.00 5 5 0 0 0
............................................................................................TGAGATTCTTCTATTCTAGTT.................................................... 21 1 1 5.00 5 5 0 0 0
..................................................AGTATAATAGCAGGCTTATCACA............................................................................................ 23 1 1 5.00 5 0 4 0 1
............................................................................................GGAGATTCTTCTATTCTACTT.................................................... 21 1 1 5.00 5 5 0 0 0
..................................................AGTAGAATAGCAGGCTTATCATA............................................................................................ 23 1 1 5.00 5 1 4 0 0
.............................................................................................GAGATTCTTTTATTCTACTTT................................................... 21 1 1 5.00 5 5 0 0 0
..................................................CGTAGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 5.00 5 0 5 0 0
............................................................................................TGAGATTCTTCTATTCTACCT.................................................... 21 1 1 5.00 5 5 0 0 0
............................................................................................TGAGATTCTTCTAGTCTACTT.................................................... 21 1 1 5.00 5 5 0 0 0
..................................................AGTGGAATAGCAGGCTTATCACA............................................................................................ 23 1 1 5.00 5 0 4 1 0
..................................................AGTAGAATAGCAAGCTTATCACA............................................................................................ 23 1 1 5.00 5 0 2 3 0
.............................................................................................GAAATTCTTCTATTCTACTTT................................................... 21 1 1 5.00 5 5 0 0 0
...............................................................................................GATTCTTCTATTCTACTT.................................................... 18 0 1 5.00 5 5 0 0 0
............................................................................................TGAGATTCTTCTATTCTACGGT................................................... 22 2 1 5.00 5 5 0 0 0
............................................................................................TGAGATTCCTCTATTCTACTT.................................................... 21 1 1 5.00 5 5 0 0 0
.............................................................................................GAGATTCTTCTATTCTAC...................................................... 18 0 1 5.00 5 5 0 0 0
............................................................................................TGAGAATCTTCTATTCTACTT.................................................... 21 1 1 5.00 5 5 0 0 0
..........................................................................................GATGAGATTCTTCTATTCTACTTT................................................... 24 2 1 5.00 5 5 0 0 0
..........................................................................................GGTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 5.00 5 5 0 0 0
..................................................AGTGGAATAGCAGGCTTATCAC............................................................................................. 22 1 1 4.00 4 1 2 0 1
....................................................TAGAATAGCAGGCTTATCGCA............................................................................................ 21 1 1 4.00 4 0 1 3 0
..........................................................................................CTTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 4.00 4 4 0 0 0
..................................................AGTAGAATAACAGGCTTATCACA............................................................................................ 23 1 1 4.00 4 0 4 0 0
...........................................................................................CTGAGATTCTTCTATTCTACT..................................................... 21 1 1 4.00 4 4 0 0 0
............................................................................................TGAAATTCTTCTATTCTACTT.................................................... 21 1 1 4.00 4 4 0 0 0
..................................................AGTAGAATAGCAGGTTTATCAC............................................................................................. 22 1 1 4.00 4 1 3 0 0
............................................................................................TGAGCTTCTTCTATTCTCCTTT................................................... 22 2 1 4.00 4 4 0 0 0
............................................................................................TGAGATTATTCTATTCTACTTG................................................... 22 2 1 4.00 4 4 0 0 0
............................................................................................TGAGATTCTTCTAATCTACTT.................................................... 21 1 1 4.00 4 4 0 0 0
.............................................................................................GAGCTTCTTCTATTCTACTT.................................................... 20 1 1 4.00 4 4 0 0 0
..........................................................................................CATGAGATTCTTCTATTCTACTTT................................................... 24 2 1 4.00 4 4 0 0 0
..................................................AGTAGAATAGCAGGCTTATT............................................................................................... 20 1 1 4.00 4 0 0 4 0
............................................................................................TGAGATTCTTATATTCTACT..................................................... 20 1 1 4.00 4 4 0 0 0
............................................................................................TGAGATCCTTCTATTCTACTT.................................................... 21 1 1 4.00 4 4 0 0 0
..............................................................................................AGATTTTTCTATTCTACTTT................................................... 20 1 1 4.00 4 4 0 0 0
............................................................................................TGGGATTCTTCTATTCTCCTTT................................................... 22 2 1 4.00 4 4 0 0 0
............................................................................................TGAGTTTCTTCTATTCTACTT.................................................... 21 1 1 4.00 4 4 0 0 0
............................................................................................TGAGATTCTTCTATTCGACTT.................................................... 21 1 1 4.00 4 4 0 0 0
.............................................................................................GAGATTCTTCTAGTCTACTTT................................................... 21 1 1 4.00 4 4 0 0 0
..........................................................................................GCTGAGATTCTTCTATTCTACTTT................................................... 24 2 1 4.00 4 4 0 0 0
....................................................TAGAATAGCAGGCTTATCTCA............................................................................................ 21 1 1 4.00 4 0 1 3 0
.............................................................................................GAGATTCTCCTATTCTACTTT................................................... 21 1 1 3.00 3 3 0 0 0
..............................................................................................AGATTCTTCTATTCTACTTTT.................................................. 21 1 1 3.00 3 3 0 0 0
..................................................AGTAGAATAGCAGGCTTGTCACA............................................................................................ 23 1 1 3.00 3 0 2 1 0
............................................................................................TGAGGTTCTTCTATTCTACTT.................................................... 21 1 1 3.00 3 3 0 0 0
..............................................................................................AGATTCTTCTATTCTACT..................................................... 18 0 1 3.00 3 3 0 0 0
..................................................AGAAGAATAGCAGGCTTATCAC............................................................................................. 22 1 1 3.00 3 2 1 0 0
.....................................................AGAATAGCAGGCTTATCAC............................................................................................. 19 0 1 3.00 3 3 0 0 0
..........................................................................................TGTGAGATTCTTCTATTCTACTT.................................................... 23 0 1 3.00 3 2 1 0 0
....................................................TAGAATAGCAGGCTTATCACT............................................................................................ 21 1 1 3.00 3 2 0 1 0
............................................................................................TGAGATTCTTCTATTCAACTTT................................................... 22 1 1 3.00 3 3 0 0 0
..................................................AGTAAAATAGCAGGCTTATCAC............................................................................................. 22 1 1 3.00 3 1 0 0 2
............................................................................................TGAGATTCTTCTATTCTACTTTGGC................................................ 25 2 1 3.00 3 3 0 0 0
............................................................................................TGAGATACTTCTATTCTACTT.................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TGACATTCTTCTATTCTCCTTT................................................... 22 2 1 3.00 3 3 0 0 0
..............................................................................................AGGTTCTTCTATTCTACTTT................................................... 20 1 1 3.00 3 3 0 0 0
..........................................................................................AGTGAGATTCTTCTATTCTACTTT................................................... 24 1 1 3.00 3 3 0 0 0
..................................................AGTAGAATAGCAGACTTATCAC............................................................................................. 22 1 1 3.00 3 2 1 0 0
....................................................TAGAATAGTAGGCTTATCACA............................................................................................ 21 1 1 3.00 3 0 3 0 0
............................................................................................TGAGCTTCTTCTATTCTACTGT................................................... 22 2 1 3.00 3 3 0 0 0
.............................................................................................GAGATCCTTCTATTCTACTTT................................................... 21 1 1 3.00 3 3 0 0 0
.............................................................................................GAGATTCTTCTCTTCTACTTT................................................... 21 1 1 3.00 3 3 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACATG.......................................................................................... 25 0 1 3.00 3 1 1 1 0
............................................................................................TGAGATTGTTCTATTCTACTT.................................................... 21 1 1 3.00 3 3 0 0 0
..................................................AGTAGAATAGCAGGCTTATCACAC........................................................................................... 24 1 1 3.00 3 2 1 0 0
..................................................ATTAGAATAGCAGGCTTATCA.............................................................................................. 21 1 1 3.00 3 3 0 0 0
.............................................................................................GAGATTCTTCTATTCTACTGT................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TGAGATTCTTCTATTCTCCTTC................................................... 22 2 1 3.00 3 3 0 0 0
..................................................AGTAGAATAGCAGGCTTATAACA............................................................................................ 23 1 1 3.00 3 0 1 1 1
............................................................................................TGAGATTCTTCTATCCTACTT.................................................... 21 1 1 3.00 3 3 0 0 0
..................................................AGTAGGATAGCAGGCTTATCAC............................................................................................. 22 1 1 3.00 3 1 1 1 0
............................................................................................TGGGATTCTTCTATTCTACTGT................................................... 22 2 1 3.00 3 3 0 0 0
............................................................................................TGAGAGTCTTCTATTCTACTT.................................................... 21 1 1 3.00 3 3 0 0 0
...........................................................................................CTTAGATTCTTCTATTCTACTTT................................................... 23 2 1 3.00 3 3 0 0 0
............................................................................................TGAGCTTCTTCTATTCTACTTTT.................................................. 23 2 1 3.00 3 3 0 0 0
............................................................................................TGAGATTCTTATATTCTACTTG................................................... 22 2 1 3.00 3 3 0 0 0

Anti-sense strand reads

CACAAGAGTCAATAGGAGCTCCTAAAAGGTGCTAGCCGCACAGAAACCGTTCATCTTATCGTCCGAATAGTGTACAAGTTAAGTTAGACGACACTCTAAGAAGATAAGATGAAAGCTGTTGTGGGCAATTGTAGTCTGACGGTTCACGTGAAAGTCACCTCAATA

************************************((.((((..((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))..))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body		 V115

head
................................................................................................TAAGAAGATAAGATGAAAGCTGTT............................................. 24 0 1 1.00 1 1 0 0
..............................................................................................TCTAAGAAGATAAGATGAAGG.................................................. 21 1 1 1.00 1 1 0 0
...............................................................................................................................................TCACGTGAAAGTCACCTCAAT. 21 0 1 1.00 1 1 0 0
..............................................................................................TCTAAGAAGATAAGATGAAAGCTG............................................... 24 0 1 1.00 1 0 1 0
...............................................CGTTCATCTTATCGTCCGAAT................................................................................................. 21 0 1 1.00 1 1 0 0
...................TCCTAAAAGGTGCTAGCCGCA............................................................................................................................. 21 0 1 1.00 1 0 1 0
...........................................................................................GACTCTAAGAAGATAAGATGAAA................................................... 23 1 1 1.00 1 0 1 0
........................................................................................................................GTGGGCAATTGTAGTCTGACG........................ 21 0 1 1.00 1 0 1 0
...................................................................................................................CTGTTGTGGGCAATTGTAGTC............................. 21 0 1 1.00 1 0 1 0
........................................................................TACAAGTTAAGTTAGACGAC......................................................................... 20 0 1 1.00 1 0 1 0
..................................................................ATAGTGTACAAGTTAAATTAG.............................................................................. 21 1 1 1.00 1 1 0 0
................................................GTTCAGCTTATCGTCCGAATA................................................................................................ 21 1 1 1.00 1 1 0 0
.......................................................................................................ATAAGATGAAAGCCGGTGTA.......................................... 20 3 13 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_11:2578644-2578808 - dse_1856 GTGTT--------------CTCAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGACT--G----------------------------CCAAGT-GCACTTTC------------------------------------AGTGGA--G-TTAT
droSim2 3l:22164241-22164415 - dsi-mir-958 Known_mirbase GTGTT--------------CTCAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCCGACCC-----------------GACTG---CCAAGG-GCACTTCC------------------------------------AGTGGA--G-TTAT
dm3 chr3L:22662311-22662515 - dme-mir-958 Known_mirbase GTGTT--------------CTGAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCCGACC---------------------CGACTGCCAGT-GTAATTTCAAGGTAACAGACA----GAA-AGTAAAATAAAGGGCAGCGGA--G-TTAT
droEre2 scaffold_4784:22312204-22312407 - der_20 confident GTGTT--------------CTGAGTT----------ATCCTTGA-----------------------------------------------GGAT--------------------------------------TGTCTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAACCCGACC---------------------CGTCTACCAGT-GCCATTTCAAGGTAAAAGCCA----GAA-AGTAAAAT-GGGGGCAGTGGA--G-TTAT
droYak3 3L:23123645-23123844 - dya_21 confident GTGTT--------------CTGAATT----------ATCCTTAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAACC----C---------------------CGACTACAAGT-GCAGTTTCAAGGTAACAGACA----GAA-TGTAAAAT-AGGGGCAGTAAA--G-TTAT
droEug1 scf7180000409801:238217-238418 - GTGCT----------------GAGTTATACCAAGGTGTCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCGCGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCACC----------------------------TCAGAACTAGT-GCGATTTCAAGGTAACTAACTAACCGAA-AGTAAAATCGA--------GA--G-TTTT
droBia1 scf7180000302377:589976-590175 + GAGTT-G--------AGTTTCGCGTT----------ATCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCACC----------------------------TGAGTACAAGT-GCAATTT-GAGGTAACTGACA----GAAAAGTAA--C-GAGAGCGGTAGA--T-ATTT
droTak1 scf7180000415263:76286-76484 - GTGTC----------------GAGTT----------ATCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGCCA--A----------------------CTAAATACAAGT-GCAATTTCAAGGTAACTGACA----GAA-AGTAAAA--ACGAGCGGTAGA--GTTTTT
droEle1 scf7180000491199:65248-65445 + GTGTC-G--------AA--GGGAGTT----------ATCCCCTG-----------------------------------------------GTAT--------------------------------------TTTCCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACA----------------------------TAAGTTCGAGT-GCCATTTGAAGGTAACTAACA----GAA-A-----AC-GAGAGCAGTTGAGAGTTTTT
droRho1 scf7180000773586:33566-33761 + GTGTT-G--------AA--TTGAGTT----------ATCCTCAA-----------------------------------------------GGAC--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----------------------------TAAGAACAAGT-GCAATTGAAAGGTAACTAACT----GAA-TG--------AGAGCCGTAGAGAGTTTTT
droFic1 scf7180000453830:377305-377495 + GTGCT-T--TGCTG-AC-TCTGTGCT----------ATCCTCAA-----------------------------------------------GGAC--------------------------------------TTT-CTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCACC----------------------------CAAGTTCGAGT-GCAATTTCGAAGTAACTAACA----GAA-AGCAGAGC-GAG-----------------
droKik1 scf7180000299918:44922-45105 - GTGTT-G--------CG--TACAGTGGT--------ATCCCCAA-----------------------------------------------GGATA-------------------------------------TTTCCGCGAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCACCCA-GGTGT-----------------GGCTGAGACGAAGC-TGGC-TTCCAGGTAACTAAC--------------------------------------
droAna3 scaffold_13337:22380344-22380537 - dan_26 confident -TGCG--------------CCGAGTTATG---T---G-CCCCAA-----------------------------------------------GAATA-------------------------------------TTCCAACGACCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACCGATCT--C-CTGGGAAGAAATCCCAATGAACTAGAAAAAAGCAGCACTTCC------------------------------------ACAAAA--A---TT
droBip1 scf7180000396426:441166-441334 + GTC------------------AAGTTATA---T---G-CCCCAA-----------------------------------------------GGATA-------------------------------------TTTCAACGACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACCGTTCT--A----------------------CTGGGAATAAAT-G--CTTCC------------------------------------ACAAAA--T-TTGA
dp5 XR_group8:344148-344303 - dps-mir-958 Known_mirbase GTGTG----------------------------------CCCAA-----------------------------------------------GGATA---------------------------------TGG-CTAGCACGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTAA----------------------------T-----AGAGCAGCCCTCCC------------------------------------CAAC-----CCCTC
droPer2 scaffold_96:132292-132410 + dpe_47 confident G--------------------------------------------------------------------------------------------------------------------------------------------ATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTTA----------------------------T-----AGAGC--------------------------------------------------A--G-CCCT
droWil2 scf2_1100000004511:7060855-7061014 + dwi_26 confident ATAATTG--------------CA--------------------A-------------------AAAAAAAAGGATCGATATC--GA-----TGAG-------------------------TTTTGACTATGACTAT---CTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACAAA--------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:17089365-17089522 + dvi-mir-958 Known_mirbase AAATG-CACAGTAGAAGT------TT----------TTCCTTTG------------------------------------------------TGT-----------------TTTTTTAATGTTCTCTAT---ATATTTTGATCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTC-----------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:22084773-22084928 + dmo_24 confident GTGTC-G-------------CGAGTG----------AGTTTTGA----------------------------------TTTC--G-------AGC-----------------AAAATGTGTTTTCCCTGTGATT---CTCAGTCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTC-----------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:15103983-15104194 - dgr_47 confident GTGTC-G------------------------------TCCTCTGTGTGATCGATTTAGTGAAAAAAAATAA--ATAAATATGTAAATTCAAATATGTTTCCACGTGTGTGCAGGTTTTATGGTTTTTGTT---TTACTCTGATCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACATT------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GTGTT--------------CTCAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGACT--G----------------------------CCAAGT-GCACTTTC------------------------------------AGTGGA--G-TTATSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221121290.00121290119374362148569
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................2119144.0091449141210
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2119058.0090588884787620
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2318937.008937225817724692215
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2211408.00140848934048297
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................2011124.0011241124000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................201802.0080275420235
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................201665.00665665000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................211659.006596815542610
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................211515.005152481965912
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231463.00463455143
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191179.00179179000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221171.00171166050
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................201162.0016227161181
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231152.00152150020
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201148.001486452275
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................23195.009595000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18178.007878000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19173.0073441253
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................23173.007373000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22150.005049010
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19148.0048257160
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19146.004646000
......................................................................................................................................................................................TGTTCAATTCA-ATCTGCTG................................................................................................................................................19141.0041140270
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19141.004141000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21138.003838000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG...........................................................................................................................21134.003434000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG..........................................................................................................................21134.003434000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................19129.0029112142
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23129.002928100
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................22125.002525000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22125.002525000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................23125.002553170
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................22124.002424000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18118.001810080
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20118.001818000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23117.00172591
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................24115.00157260
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24114.001414000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18113.00136151
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24113.00135611
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22112.001212000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24111.00114250
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23111.00113710
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAT...................................................................................................................................................................2218.0081430
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................2217.0072140
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................2017.0072140
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2317.0073040
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................2217.0077000
.................................................................................................................................................................TAGAATAGCAGGCTTATC.......................................................................................................................................................................1816.0060051
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................2316.0061140
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................2115.0052300
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2215.0053110
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................2215.0055000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................1815.0055000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTAC.............................................................................................................................1815.0055000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATT.......................................................................................................................................................................2014.0040400
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................2113.0033000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1813.0033000
..................................................................................................................................................................AGAATAGCAGGCTTATCAC.....................................................................................................................................................................1913.0033000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT...........................................................................................................................2313.0032010
.................................................................................................................................................................TAGAATAGCAGGCTTATCACT....................................................................................................................................................................2113.0032100
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG..................................................................................................................................................................2513.0031110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC...................................................................................................................................................................2413.0032010
droSim2
GTGTT--------------CTCAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCCGACCC-----------------GACTG---CCAAGG-GCACTTCC------------------------------------AGTGGA--G-TTATSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................22128651.00286513049666426179266371091002706564020000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2319149.0091495958453522341541423291111463233506717021
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2117144.007144552223286337331870103003911000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG........................................................................................................................2415480.0054800000490857200000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................1914165.00416502213368446400000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2013255.00325521763202593291017101700000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................2112043.00204302220362000000100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................181829.0082900057566600101000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................221821.008215186781599327111510041304
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201312.003120083020000000002000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................201275.0027500024626300000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................211220.0022002235201276017200000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................231185.0018502615800000000100000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................211151.00151119827110036719050207
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231133.001330211300000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................231125.001251290000000103100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231104.001040002901000000200000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................181101.001010110851200000001001
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................23183.0083011810000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20177.0077012130000007000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................20165.0065321934510000802000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................19152.0052023470000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTCG........................................................................................................................23143.0043000038500000000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18140.0040045310000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................22138.00380222101000100200000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19138.0038000350300000000000
......................................................................................................................................................................................TGTTCAATTCA-ATCTGCTG................................................................................................................................................19138.00380312600000001700000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19136.00360001719000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTAC.............................................................................................................................18132.0032000027500000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................23129.0029000290000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATT.................................................................................................................................15127.0027000000025182000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24125.0025000240000010000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19123.002300248300100202001
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCGA.......................................................................................................................25123.0023000023000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG...........................................................................................................................21117.0017000170000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22117.001712580000010000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24114.001400830000100100001
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................23114.0014000140000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................23113.001310300000000900000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................24111.001100900000000101000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................22110.001001090000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................2217.00700050000200000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................2317.00700020000000500000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2316.00601010000000400000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................2215.00500230000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG..........................................................................................................................2114.00400040000000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1814.00400201100000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................2114.00400040000000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................2214.00400020000000200000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTCG........................................................................................................................2214.00400001300000000000
...............................................................................................................................................................AGTAGAATAGCAGGCT...........................................................................................................................................................................1613.00300000001020000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................2413.00300011000000100000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2213.00301000010000001000
..................................................................................................................................................................................................ATCTGCTGTGAGATTCTTCTATT.................................................................................................................................2313.00300300000000000000
...................................................................................................................................................................................................TCTGCTGTGAGATTCTTCTATTCTACTTT..........................................................................................................................2913.00300300000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTG...........................................................................................................................2013.00300030000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................2213.00300030000000000000
...............................................................................................................................................................................................................TTCTTCTATTCTACTTTCG........................................................................................................................1913.00300002100000000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................1813.00300011100000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAA.....................................................................................................................................................................2213.00300110000000100000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................1912.00200010000010000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................2112.00201010000000000000
...................................................................................................................................................................GAATAGCAGGCTTATCACA....................................................................................................................................................................1912.00200010000000100000
............................................................................................GAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCA...........................................................................................................................................................................................2912.00200020000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATC.......................................................................................................................................................................1912.00200000000200000000
................................................................................................................................................................GTAGAATAGCAGGCTTAT........................................................................................................................................................................1812.00200011000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................2412.00200020000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................2212.00200000000000200000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCG......................................................................................................................................................................2112.00200200000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2112.00200020000000000000
....................................................................................................................................................................................................CTGCTGTGAGATTCTTCTATTCTACTTT..........................................................................................................................2812.00200200000000000000
.......................................................................................................................................................................................GTTCAATTCA-ATCTGCTG................................................................................................................................................1812.00200110000000000000
...............................................................................................................................................................AGTAGAATAGCAGGC............................................................................................................................................................................1512.00200000000110000000
.......................................CTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTC..................................................................................................................................................................................................2812.00200200000000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTC................................................................................................................................1812.00200002000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................2112.00200020000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCGAC......................................................................................................................2611.00100001000000000000
dm3
GTGTT--------------CTGAGTT----------ATCCTCGA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTATGGCAAGTAGAATAGCAGGCTTATCACATGTTTAATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACACCCGACC---------------------CGACTGCCAGT-GTAATTTCAAGGTAACAGACA----GAA-AGTAAAATAAAGGGCAGCGGA--G-TTATSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................22167120.0067120000042525148250030327223100000100042010041922501440036001000023421220141000001459222000000000000000000322146151029771421551161720248807226169173449459872675882839143607291136642020547480942957135893216981114675274208051090931581042303118192056186287001000160000000000000001692940478006215942012595391838300400149455447216101043908800000020418800100100001141998523748723710722942220172140000140065660006360003829893007060200060000100200000004915010140070000009414042925413652040317607414700223000200003000137017697357165180000001
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................23128719.0028719000005052138767000000000010100000000101000011000101500000017219850000000000000000000000176116494086006616194174001451161348324513120020516283553931550010100000000112000601311103122814000002000000000000000230700732147041510000015233944970000166044560000076671000000008644202123441261212000163006294433639000099527103590200016010000020000000165811109738001201000121604084503456344214122511702126455600161391031351100289101309112331236137515172755102000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTATC.......................................................................................................................25210325.50206510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139326719000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2114378.004378000006010966110000000001000001529129103100000100201115000000130631990000000000000000000100110520103901429401531417824575372031755105118324113191741970270200100150410001501100000000000002000000000000000113104000131466331501560000039102748300094014000000234000000000020241916041810152601530003000393701010001381280015700000000000000001000000000010002000000136182501320000250125710000000100001002305717752545000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2213178.00317800000000042110000000000000000000000000000001000002000000312512000000000000000000000040212510017249011201716016327400000445140130000100000000001000000000021200000010000000000000000000004714100006000007212667000410320000004130020000005401761500415000000002000915017700002112300136010008000000010100000020800020000000004110517613123004402333001100100000014001172200160216462277001000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................2113058.00305800001000130100000000001000000000002000000000000001000000740000000000000000000000030293300072120110142350722000000002215251900000000100000000000000000210000000000000000000000000000001000000000000412945000230270000001700000000049131531000010000000000153134050000094000410100030000000000000002231801080000000001013873934062000213507061000060013000221001660109193202265186000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2112138.002138000002000110000000000002000000000011000000000001000000000201450000000000000000000000101570001435001100324210323050000042604022100000000000000100001000100000000010000000000000000201002452030000000011826290003714600000061300200000021412648020000010000120042270360000124002800000000000000010000007020416003000000465526120406111098079970130504041000600920149112133159133000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAATC.................................................................................................................................................................2611734.00173400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186548000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2011054.00105400000000002010000000000001001000007001000000110003000000391935000000000000000000000040020009120004025320021344000010620005000000000000000151001000000500010000000000000000000160400324241104000000113641350004001000000008000000000144642800010002000000001290660000114900101000000000000000000000000000010000000001758024000020015230000000000000200802715261920000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTATC........................................................................................................................241981.009810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657324000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATC..................................................................................................................................................................251497.004970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348149000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201492.00492000000000000100000000000000010000032000000000000000000000303000000000000000000000000080003040000430102000010000100000000000000000003010000000010000000100000000000000000000001101000800000061120001204000000010000000000642560000000000002000840230000110001700000000000000000000000010102000000000494101600007091800000010000000001702518223423000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................181444.0044400000000000000000000000000006131401000000000000000000000044262200000000000000000000000000000203000033123100000000000000000000000003115167534000001100000000000000000000000000010000041316000000000006000002000000000000000000049542900010000000000002100000000000000000000000000000000000000000000000000811040000101100000000000000000000301000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................221297.0029700000912216418800000000000000000000000000000000000000000000000000000000000000000000100000001310110000100020210010010007203701000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000300000000000031000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................221293.00293000007001101411600000000000000000000000000000000000000000000000000000000000000000000901300012507004068200713002043213103200000000000000000000000000000000000000000000000000110000030100001000000001000000000000000000000000001001000000000010002100000012000000000000000000000000000000000000000000000020000100000000000000000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................201266.0026600000000000000000000000000000000003000000000000000000000410000000000000000000000000000000020100331000000000100000000000000000000000000000001000000000000000000000000000000000000000000000001000004030000000000000000004251000200000000000002201300005190014000000000000000000000000200000000000002104103000020420000000000000200110149184711000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................191266.002660000000000000000000000000000220400000000000000000000000013711000000000000000000000000000001006000013913040000101020120700000000001303910436002106000000000000000000000000000402000520200100000010500000300000000000000000004420400000000000000001312000003004000000000000000000000000000000000000000504030000100000000000000000001020221000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................211240.002400000000000020000000000000000000000000000000000000000000023846000000000000000000000000010007018002012130016330000021101119010000000001010000000000010000000000000000000000003106000223401012000002000000000000000000000000000003100000000000000001002000012002000000000000000000000000000000000000000044010000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................191190.001900000000000000000000000010000000000100000000000100000000012070000000000000000000000006000020100105500240000000000000000000000000000000000000000000000000000000000000000020100010100000000000001100050300000000000000000001070000000000000000880200000000000000000000000000000011000000000000000311301000007031200001000000000007011211108000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231188.0018800000311230020000000000000000000000000000000000000000000000000000000000000000000020400001012123012202011501000005101111000000000001010000000100000000000000000000000000000220600162200000000001110000000000000031000000000012313030111000020001003000033002000000000000000000000000000000000000000215040000200100000000000000001022000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCATC....................................................................................................................................................................231185.00185000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010281000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................231179.001790000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000100000000000000001000010000000000000000010100000000000000000000000000000000000000000000000000001000000000000000000050000000000000300023010000160050000000000000000000000000010100000000015397004000047018600000000000001000001110000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTATC.......................................................................................................................242157.00314000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023777000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................221155.0015500000100165450000000000000000000000000000000000000000000000000000000000000000000010000001130000000100010000004000100400000000000000000000000000000000000000000000000000010000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................191132.00132000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000200101110000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000226000000000000000034030000120000000000000000000000000100000100000000004110600006066000000000000000050756104000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231115.0011500000000000000000000000000000000000000000000000000000000000000000000000000000000010300002060010350002000000202101070000100000001000000000000000000000000000000000000000000001000000000000001000000000000002000000000000100102010100002828002102000001002000000000000000000000000000000000000000000010000000100000000000000000000100000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................231112.001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000100000304000000010000000000110500000000000000003108000020003000000000000000000000020000000000000005130001000000100000000000000300501131254000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................241106.0010600000000010000000000000000000000000000000000000000000000000000000000000000000000030480000010000220000000000001021030000000000000000000000000000000000000000000000000000000001000000000000010000000010000000000000000000000010000000003813000000000000001000000000000000000000110000010000000007111000000002100000000000001000000122000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231104.00104000000000110000000000000000000000000000000000000000000002553400000000000000000000000000000103000004000000000001000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000811000000000001000000000000000000000000000000000000000002001000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18198.00980000000000000000000000020000000000000000000000000000000010000000000000000000000000000000102000021000000000000000000000000000000010000000000000000000000000000000000000100000000000000000001211000001000000000000000000015500000000000041005810000000000000000000000000000000000000000000000001102090000306400100000000000000005316000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24189.0089000000000000000000000000000000000000000000000000000000002338130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000033001001000000000000000000000000000000000000000000000000100010000101000000000000000000010001000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................20182.008200000100010000000000000000000000000000000000000000000000000000000000000000000000000000004014001061332210100010031020800000000000000000000000000000000000000000000000000010100050000000000000000000000000000000000000000001000000000000000002302000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................19174.00740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402100002356200100001110000400000000000000000000000000000000000000000000000000000100061100001000000000000000000000000000000000002100000000000000006000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAATC...................................................................................................................................................................24172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGTTTAATTCA-ATCTGCTG................................................................................................................................................19171.00710000000000000000000000000000100000000000000000000000000001000000000000000000000000000000201001013000200000000000300000000000000000000000000001000000000000000000000000000000010101100000000100000000000000000000000000010000000010000000056010000020020000000000000000000000000000000000000071701010000100100000000000000000002002000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................22164.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000089000004000030002110000000002220400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001001000000001000000000000000000000000000000000000001110010000100000000000000000001031003000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................20163.006300000000000000000000000000000000000000000000000000000000186220000000000000000000000000000020000000100200000000000000000000000000110000000000000000000000000000000000000010100200000000000001000000000000000000000000000012000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23154.0054000000000000000000000000000000000000000000000000000000000000000000000000000000000004000030000001000000000000000000100000000000000000000000000020000000000000000000000000000000000000000000200000000000000000000000000100000000000000001004004000002004000000000000000000000000000000000000005211030000101300001000000000000013012000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAT...................................................................................................................................................................22152.0052000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000100011000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000011000000000000000002102000000001000000000000000000000000300000000000000410000000001100000000000001003035263000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000003000000301000004111100000000010000200000000000002000000000000000000000000000000000000010200050000000000000200000000000000000000000000103100000000000000000000000000000000000000000000000000000000000000000000300020000000100000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTC........................................................................................................................24142.004200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAT........................................................................................................................24141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23135.0035000000010000000000000000000000000000000000000000000000000000000000000000000000000002500000100001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000002000000000000000000001000003000000000000000000000000000000000000000001211010000101100000000000000001030111000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24133.0033000000000010000000000000000000000000000000000000000000000000000000000000000000000500000010000003400010100200200001200000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000002000000001000000001000000000000000000000000000000000000000000100000000000100000000000000000000110000000
.................................................................................................................................................................TAGAATAGCAGGCTTATC.......................................................................................................................................................................18131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000009900000000000000000000000000000000000000000000000000000000000000000000300000000400000000000000100000010000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG..................................................................................................................................................................25127.002700000000000000000000000000000000000000000000000000000000111410000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCT...............................................................................................................................17124.002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAT..................................................................................................................................................................25123.002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC.........................................................................................................................22122.00220000000000000000000000000000000000000000000000000000000092110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACC....................................................................................................................................................................21118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000200010000801100000000000000000000021000000
...............................................................................................................................................................AGTAGAATAGCAGGCTT..........................................................................................................................................................................17117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTA...........................................................................................................................21117.0017000000000100000000000000000000000000000000000000000000000000000000000000000000000000000070100000000000100000000100200000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCC......................................................................................................................................................................21116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000002000000000000000000000000000000000000000000000000000000000000703100000000000000000000010000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC..........................................................................................................................22116.00160000010000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAC........................................................................................................................24115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTAA..........................................................................................................................22114.0014000001000101000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAC..................................................................................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTCTTCTATTCTACTTT..........................................................................................................................17214.002800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG........................................................................................................................24114.0014000000000000000000000000000000000000000000000000000000003270000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCA..........................................................................................................................22114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................22113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001001000000100000000000000000001011001000000
...................................................................................................................................................................GAATAGCAGGCTTATCACA....................................................................................................................................................................19113.0013000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100030000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000002000000000000000000000000001000000000000
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................20112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000013000000000000000000000000001000101000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................21112.0012000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000040100003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC...................................................................................................................................................................24111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................22111.0011000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000001002000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCT......................................................................................................................................................................19110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000010000201000000000000000002011000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTC.......................................................................................................................2529.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTATC.......................................................................................................................2329.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACAATC.................................................................................................................................................................2519.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGTTTAATTCA-ATCTGCTGT...............................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100010000002000000000000000001000011000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTT.........................................................................................................................................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000010002000000
.....................................................................................................................................................................ATAGCAGGCTTATCACA....................................................................................................................................................................1719.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000060000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT...........................................................................................................................2319.009000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000002200000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAA.....................................................................................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000012000001000000001000000000000000000000000000000000000000000010000000100000000000000000001000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACTC...................................................................................................................................................................2419.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTATC........................................................................................................................2328.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTGTT--------------CTGAGTT----------ATCCTTGA-----------------------------------------------GGAT--------------------------------------TGTCTACGATCGGCGTGGCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTTACATCAAACCCGACC---------------------CGTCTACCAGT-GCCATTTCAAGGTAAAAGCCA----GAA-AGTAAAAT-GGGGGCAGTGGA--G-TTATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221435342.00435342276501157409673347622672
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21133163.0033163292683662629154440
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21121683.00216832133035300000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................23113460.0013460495532513998588812810
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22110569.0010569791049000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2012662.002662236512829127310
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2012151.0021512145600000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2212010.0020108627362484353860
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................2311598.001598136322801330
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................2011533.00153314498400000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2111030.001030465259477720
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231702.007026663200400
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................211396.003967319160208350
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201358.0035812415317141580
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221328.00328324001210
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................231230.00230230000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191218.002181892900000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................231188.00188187100000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................191144.00144143100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................221140.00140835700000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG...........................................................................................................................211134.00134134000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................221122.00122122000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................181122.00122962600000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................191113.001133800362100
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................191105.001055629013520
......................................................................................................................................................................................TGTTCCATTCA-ATCTGCTG................................................................................................................................................191103.00103617031130
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24198.009893500000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTG..........................................................................................................................21193.009392100000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19188.008885300000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22182.0082681400000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................21169.006926700000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22168.006867100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23167.0067561100000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21162.006262000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20153.0053105024860
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23148.00481700015160
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24144.0044242001620
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................21131.003122900000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................23130.003011170200
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20130.003032700000
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20129.002929000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18128.0028111001150
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24122.0022100001020
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23118.00185101560
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................23118.00188202240
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................20117.00176001910
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22116.001616000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18113.00136101410
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................21113.00133000910
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................22112.001212000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................21111.001111000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18111.001111000000
droYak3
GTGTT--------------CTGAATT----------ATCCTTAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTAACTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAAACC----C---------------------CGACTACAAGT-GCAGTTTCAAGGTAACAGACA----GAA-TGTAAAAT-AGGGGCAGTAAA--G-TTATSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................222227250.504545011830910014447775914221070004
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21219690.0039380336479283425322100013
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21214248.002849602822227310000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................2227496.001499201891480120000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2323070.506141943008897161416344761010
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2021565.00313003127300000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2021293.50258722450115601130000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................232970.0019400163330060010000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................202718.501437013934400000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................222716.5014333769256313210800000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................232554.501109010951220000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................222410.5082108061410000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................222243.0048604018500000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................212224.004480339141941700010
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................212210.5042111295614801850100
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................192145.0029002494010000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................232141.002820279300000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................222141.0028202344800000000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................232121.502430243000000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................182112.0022422012100000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................222103.502070204210000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................192103.002060206000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................20276.50153083431112130000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24271.001420137310100000
......................................................................................................................................................................................TGTTTAACTCA-ATCTGCTG................................................................................................................................................19270.0014015154340000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20258.0011603422580020000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19257.001140114000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22255.501110111000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19243.5087075830100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................21243.0086077900000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23235.00700551410000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................23229.505932716100030000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21225.0050050000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18221.5043043000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19220.00400300000100000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................23218.50370161170030000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22215.5031031000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20214.5029012800000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................22214.5029029000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................21214.0028042400000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18213.0026025100000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24213.0026017610020000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAT...................................................................................................................................................................22212.0024018010050000
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20211.5023023000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................22211.0022013900000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................19210.5021018020010000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................21210.5021021000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23210.0020013310030000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2428.501706450020000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................2327.0014011120000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................1826.5013013000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC..........................................................................................................................2225.5011001100000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA........................................................................................................................2425.5011011000000000
droEug1
GTGCT----------------GAGTTATACCAAGGTGTCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCGCGATCGGCGGGTCTTTAGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGCAAACATCACC----------------------------TCAGAACTAGT-GCGATTTCAAGGTAACTAACTAACCGAA-AGTAAAATCGA--------GA--G-TTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GAGTT-G--------AGTTTCGCGTT----------ATCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCG-ATCCGCTGTGAGATTCTTCTATTCTACTTTCTACGA-CACCCGTAAACATCACC----------------------------TGAGTACAAGT-GCAATTT-GAGGTAACTGACA----GAAAAGTAA--C-GAGAGCGGTAGA--T-ATTTSizeHit CountTotal NormTotal
No Reads
droTak1
GTGTC----------------GAGTT----------ATCCTCAA-----------------------------------------------GGAT--------------------------------------TTTCCACGATCGGCGGGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCAGCCA--A----------------------CTAAATACAAGT-GCAATTTCAAGGTAACTGACA----GAA-AGTAAAA--ACGAGCGGTAGA--GTTTTTSizeHit CountTotal NormTotal
No Reads
droEle1
GTGTC-G--------AA--GGGAGTT----------ATCCCCTG-----------------------------------------------GTAT--------------------------------------TTTCCTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-GACCCGTGTACATCACA----------------------------TAAGTTCGAGT-GCCATTTGAAGGTAACTAACA----GAA-A-----AC-GAGAGCAGTTGAGAGTTTTTSizeHit CountTotal NormTotal
No Reads
droRho1
GTGTT-G--------AA--TTGAGTT----------ATCCTCAA-----------------------------------------------GGAC--------------------------------------TTTCCACGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTTGTTCA-ACCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTTAACATCACA----------------------------TAAGAACAAGT-GCAATTGAAAGGTAACTAACT----GAA-TG--------AGAGCCGTAGAGAGTTTTTSizeHit CountTotal NormTotal
No Reads
droFic1
GTGCT-T--TGCTG-AC-TCTGTGCT----------ATCCTCAA-----------------------------------------------GGAC--------------------------------------TTT-CTCGATCGGCGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCTGTTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAA-CACCCGTAAACATCACC----------------------------CAAGTTCGAGT-GCAATTTCGAAGTAACTAACA----GAA-AGCAGAGC-GAG-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTGTT-G--------CG--TACAGTGGT--------ATCCCCAA-----------------------------------------------GGATA-------------------------------------TTTCCGCGAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTTCATTCA-ATCTGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGCTAACATCACCCA-GGTGT-----------------GGCTGAGACGAAGC-TGGC-TTCCAGGTAACTAAC--------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
-TGCG--------------CCGAGTTATG---T---G-CCCCAA-----------------------------------------------GAATA-------------------------------------TTCCAACGACCGGTGGGTTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTCC-TTTA-ACCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGTAAACACCGATCT--C-CTGGGAAGAAATCCCAATGAACTAGAAAAAAGCAGCACTTCC------------------------------------ACAAAA--A---TTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221103289.0010328966351364241626426127
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2118510.00851075199261143911
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2317051.007051571617412995639298
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................2115730.00573056101200000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................2214101.0041014040610000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2212699.0026992263655219107193
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2111281.0012811084421416512
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................201910.0091077988071521
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231700.007005851073050
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................201584.0058458220000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201456.00456398580000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221455.0045544810132
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201326.0032626915361914
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231195.00195180150000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................211186.0018617710035
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................221175.0017517410000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191142.0014299430000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................221105.0010582230000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18189.008965240000
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20185.00858300020
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19182.008262000200
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................21176.007652440124
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23169.00695700264
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24164.00646300010
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................23155.00555500000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19149.004922222210
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................22147.00474610000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................23146.00464510000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19144.00444310000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24139.00393540000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................21136.00361350000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19132.00323020000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC...................................................................................................................................................................24120.00202000000
................................................................................................................................................................GTAGAATAGCAGGCTTATC.......................................................................................................................................................................19119.00191900000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20118.00180180000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23117.00171160000
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................20117.00171121012
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24117.00171600010
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAGG..................................................................................................................................................................23116.00161212010
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................21116.00160160000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20116.0016930121
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22116.00161600000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................19115.00151400010
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18115.00151100301
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................22114.00141300010
...............................................................................................................................................................AGTAGAATAGCAGGCTTT.........................................................................................................................................................................18113.00131100110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................21111.0011800030
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAA.....................................................................................................................................................................22111.0011910010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18110.0010800011
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAG...................................................................................................................................................................22110.0010601012
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................1819.009450000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTC..........................................................................................................................2019.009090000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................2219.009900000
................................................................................................................................................................GTAGAATAGCAGGCTTAT........................................................................................................................................................................1818.008800000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAG.....................................................................................................................................................................2218.008800000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAG...................................................................................................................................................................2417.007600010
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................2317.007700000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTC..........................................................................................................................1925.00100100000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATT.......................................................................................................................................................................2015.005300101
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................2415.005500000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAGGT.................................................................................................................................................................2614.004310000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1814.004400000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACTT...................................................................................................................................................................2414.004400000
droBip1
GTC------------------AAGTTATA---T---G-CCCCAA-----------------------------------------------GGATA-------------------------------------TTTCAACGACCGGAGTGCTTTTAGCAAGTAGAATAGCAGGCTTATCACAGGTTTC-TTTA-GCCCACTGTGAGATTCTTCTATTCTACTTTCGAGAAACACCCGCTAACACCGTTCT--A----------------------CTGGGAATAAAT-G--CTTCC------------------------------------ACAAAA--T-TTGASizeHit CountTotal NormTotal
No Reads
dp5
GTGTG----------------------------------CCCAA-----------------------------------------------GGATA---------------------------------TGG-CTAGCACGATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTAA----------------------------T-----AGAGCAGCCCTCCC------------------------------------CAAC-----CCCTCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221324082.00324082171675451413041365310992032150145
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21122485.00224852190172816554452427000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22121377.0021377032202441099200000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21119653.0019653118620713312600001
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................23114168.001416861953810582819265914811016
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2212778.00277811955243174346119003
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................2312267.00226701789316153314001
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2112263.002263618951814020280003
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2011911.00191101897113000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2011466.00146601259138441186000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201914.009140874355000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201802.00802167421428367004
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221660.00660065900100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231505.0050504502524321000
......................................................................................................................................................................................TGTTCCATTCA-ATCCGCTG................................................................................................................................................191359.0035952621427510000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191229.002290186385000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................181213.002130183272100000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................221200.00200019901000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................211171.001710514916100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231159.001590845614302000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................211157.00157015700000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................211156.0015608514129027000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................221139.001390271066000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................201136.00136013600000000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................231134.00134013400000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................191126.001261101308013000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................231125.00125012401000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................211123.00123049623000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................191112.00112011200000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24193.009307870602000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19169.0069031258401000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19164.006406400000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20152.005202428000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24149.004904521100000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22141.0041025142000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22140.004004000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATC.......................................................................................................................................................................19138.003803800000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................23131.003124001906000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18126.002602500100000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18125.002502320000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20123.002301320800000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23123.002301800401000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18122.002201810300000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC..........................................................................................................................22119.001900172000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................21119.001901400023000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23116.00160720403000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22116.001601500010000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................24216.003202363000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC..........................................................................................................................22115.001500141000000
.......................................................................................................................................................................................GTTCCATTCA-ATCCGCTG................................................................................................................................................18115.001501500000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAA.....................................................................................................................................................................22114.001401100102000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................22114.001401130000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................22114.001401400000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................23112.00120600402000
......................................................................................................................................................................................TGTTCCATTCA-ATCCGCTGT...............................................................................................................................................20111.001101100000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA........................................................................................................................23111.001101001000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTG...........................................................................................................................21111.00110470000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24110.00100900001000
................................................................................................................................................................GTAGAATAGCAGGCTTAT........................................................................................................................................................................1819.0090900000000
droPer2
G--------------------------------------------------------------------------------------------------------------------------------------------ATCGGTGTGTATTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCATTCA-ATCCGCTGTGAGATTCTTCTATTCTACTTTCGACAAACACCCGTTGACATCTTA----------------------------T-----AGAGC--------------------------------------------------A--G-CCCTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................22135214.0035214121347123407133
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................2113301.003301332970001
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2113133.0031339310516102
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2312197.002197756862287126274
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................211409.0040911295112288
......................................................................................................................................................................................TGTTCCATTCA-ATCCGCTG................................................................................................................................................191379.003793471418000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231374.0037403731000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................201276.0027612675003
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................201260.0026002600000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................221258.0025812129970020
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201142.0014211410000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201121.00121863130136
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22197.00970970000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................23166.00660660000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................22154.005410431000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19150.005022980011
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................22143.00430430000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................22139.00390390000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................23131.00312604010
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18130.00307230000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................19129.00295231000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................23127.00270270000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................23126.00260260000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22125.00251240000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................21124.00242114124
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19123.00230230000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23120.00201901000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23120.00200200000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19114.0014059000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24113.0013090004
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20112.00120120000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21112.00121110000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................1919.009090000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................2219.009090000
.......................................................................................................................................................................................GTTCCATTCA-ATCCGCTG................................................................................................................................................1819.009900000
..................................................................................................................................................................................................ATCCGCTGTGAGATTCTTCT....................................................................................................................................2018.008701000
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................2017.007421000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................2416.006060000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................1816.006041001
.....................................................................................................................................................................................................CGCTGTGAGATTCTTCTATT.................................................................................................................................2015.005500000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................2215.005050000
...................................................................................................................................................................GAATAGCAGGCTTATCACA....................................................................................................................................................................1914.004310000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................1813.003021000
....................................................................................................................................................................................................CCGCTGTGAGATTCTTCTATTCTACTTT..........................................................................................................................2813.003300000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................2213.003002001
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................2113.003020001
....................................................................................................................................................................................................CCGCTGTGAGATTCTTCTATT.................................................................................................................................2112.002200000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................2212.002020000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC.........................................................................................................................2212.002020000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................2412.002020000
......................................................................................................................................................................................TGTTCCATTCA-ATCCGCTGTGAGATTC........................................................................................................................................2712.002200000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2412.002020000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATGTTCC..............................................................................................................................................................2912.002100001
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................1912.002020000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1811.001010000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTA..........................................................................................................................2111.001010000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC..........................................................................................................................2211.001010000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTG.......................................................................................................................2511.001010000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA........................................................................................................................2411.001010000
............................................................................................................................................................................................ATTCA-ATCCGCTGTGAGATT.........................................................................................................................................2011.001010000
.....................................................................................................................................................................ATAGCAGGCTTATCACATGTTCCA.............................................................................................................................................................2411.001001000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTC.......................................................................................................................2511.001010000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTAC.............................................................................................................................2111.001010000
............................................................................................................................................................................................................................................GTTGACATCTTA----------------------------T-----AGAGC--------------------------------------------------.........1811.001100000
..................................................................................................................................................................AGAATAGCAGGCTTATCAC.....................................................................................................................................................................1911.001001000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................2111.001010000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCG........................................................................................................................2411.001010000
droWil2
ATAATTG--------------CA--------------------A-------------------AAAAAAAAGGATCGATATC--GA-----TGAG-------------------------TTTTGACTATGACTAT---CTAACGGTGTGTCTTTGGCAAGTAGAATAGCAGGCTTATCACATGTTCCCTTTACAACCGGTGTGAGATTCTTCTATTCTACTTTCGAAAAGCACCCGATAACAACAAA--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221160629.0016062949156281226403835
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................23121756.0021756271244929018556190
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21115935.00159355156734020611
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21112707.0012707012699170
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2211854.001854129114149850
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................2311501.001501214822150
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2011307.00130701305110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2011259.0012592120414336
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201788.007880788000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231547.005470542230
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................211517.0051701076333413
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................211355.003551112112265
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191354.003542352000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................181342.003422340000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201324.003242150191503
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221222.0022221990210
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................191163.00163112714210
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................231118.001180118000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231112.001120108040
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................221112.001120112000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................231110.001100110000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATG..................................................................................................................................................................231106.001060423610
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19192.0092092000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24180.0080078020
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19173.00731571131
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19165.0065065000
......................................................................................................................................................................................TGTTCCCTTTACAACCGGTG................................................................................................................................................20164.0064059050
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20154.00540333153
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24145.00450250200
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22144.0044044000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18138.00380220151
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................18131.00310200101
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21131.0031130000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22125.0025024010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................22124.0024024000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................24122.0022022000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22121.0021018030
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23121.0021230160
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................23121.00211100100
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18119.0019019000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCC........................................................................................................................24118.0018018000
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................20118.0018051120
.................................................................................................................................................................TAGAATAGCAGGCTTATCACAT...................................................................................................................................................................22117.001709710
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23117.0017011150
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22116.0016016000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACT............................................................................................................................22116.0016014020
................................................................................................................................................................GTAGAATAGCAGGCTTATC.......................................................................................................................................................................19112.0012011010
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................23112.001225050
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................24111.001136020
...................................................................................................................................................................GAATAGCAGGCTTATCACA....................................................................................................................................................................19110.001006040
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTT...........................................................................................................................2319.00908010
...............................................................................................................................................................AGTAGAATAGCAGGCTTT.........................................................................................................................................................................1819.00909000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................2219.00909000
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................1919.00908010
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................2019.00909000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA........................................................................................................................2319.00909000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................2119.00909000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................2117.00706100
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCCC.......................................................................................................................2516.00606000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTTT.........................................................................................................................2016.00606000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1815.00505000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................2415.00503020
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC.........................................................................................................................2215.00505000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA........................................................................................................................2415.00505000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT..........................................................................................................................2415.00505000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTTA.........................................................................................................................2015.00505000
................................................................................................................................................................GTAGAATAGCAGGCTTAT........................................................................................................................................................................1814.00404000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................2214.00401030
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................2114.00404000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCA........................................................................................................................2413.00303000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATG..................................................................................................................................................................2513.00302010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAT........................................................................................................................2413.00303000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAA.....................................................................................................................................................................2213.00301020
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATGA.................................................................................................................................................................2413.00302010
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATGT.................................................................................................................................................................2613.00300120
......................................................................................................................................................................................TGTTCCCTTTACAACCGGTGT...............................................................................................................................................2113.00302010
...........................................................................................................................................................................................................GAGATTCTTCTATTCTAC.............................................................................................................................1812.00202000
droVir3
AAATG-CACAGTAGAAGT------TT----------TTCCTTTG------------------------------------------------TGT-----------------TTTTTTAATGTTCTCTAT---ATATTTTGATCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTACAATTCA-ACCTAGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221399626.0039962610733129244614646200000005263332375818691334116135245457780300531300546140256349498729175162527102555392557528816617738136025540027273355683332291151463312789940172035214128381316227212227
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21150845.00508451404324110841120000000825378128339303269013008991541420610423442103215143120319227200502129242716251772469725143135089220026171310012
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21127959.0027959002784199000000000024000203102010000000000002000000000000000000000100000010000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2319461.0094611102153058166100011000023977467032491983291943121547072110367611182712312512790731167012712373101894240685335118129501750510316127763433114452
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2014527.00452740347750000000000086521750494301901225722617367192010000058100000121011031211551221027032400000112000100
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................2214440.004440201744243000000000023001005200000020000000002000000000000000001001000200000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2013781.0037810037770000000000011000002000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................2313389.0033890027682360000000000475412301413048380223111652000000040100011020251015231520100271200000000000111
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2211261.00126137170638010011000041912109802143330322134102000102001000012402613146420754113010101123010100101
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................2011197.00119700113749000000000000010201000000000000000000000000000000000100000002400000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2111078.00107830048300100020000401661598020396209111920160001133000000000000000000010330801000000030001010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231802.0080200653370000000000812153301611010112913010000040000000000010000101101016900000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231741.0074100670170000000000911040107500042050000000003000000000000000000000003000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................231559.00559005512000000000010012001000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................221378.003780035814000000000010100100100000000000000000000000001001000000000000000000000000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191377.003770035511000000000000110100300000000000000000000000000000000201110000000000000000000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................231344.00344003402000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................181327.00327003009000000000011000100000000041000000001000000000010000510000000200000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................181283.0028300128000000000003815565902623000450120010000002000000000000000001000102000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................191270.00270002700000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................191218.002180011280000000000141002170106000131200000010040000001010211002121710102400000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221200.00200201950000000000000010000000000000000000000000000000000000000000200000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201196.001965090500000100009514110141101000100000010400000002000010000101204400000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................211159.001590011435000000000011100000300000020000000001000000000000000000100000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................241147.00147007110000000000151100303404285221010421203000000000000000000000104600000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTC........................................................................................................................241146.00146001211000000000012002102200001020000000002000000000000000002000106000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCC........................................................................................................................241120.00120001042000000000011000000000010001100000001000000000000000000000105200000000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................19199.009900962000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................21197.0097004400000000000210201011000000200000000040000001000000001001603000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19178.0078302500000000000320410012000000000000000030000000000000000000302500010000040000010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22178.007800714000000000000000000000000000000000000000000000000000000100000100000000000001
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22177.007700770000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................24176.0076140141000000000010000000000000000000000000000101513260432000810600000010100000001
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................22173.0073004320000000000030110001000010010000000001000000000000000001000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................23170.007010301000000000060001103000000201000000003000001111020011000050600000000000000002
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................23167.006740262000000000010000200200000001000000000000012402111121000420600000000000100000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC.........................................................................................................................22167.006700652000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTCC.......................................................................................................................25164.006400630000000000000000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23162.0062103400000000000300010001010100100010000020000000000000001010001202000000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21156.005610550000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22151.005100510000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................22145.004500450000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGTACAATTCA-ACCTAGTG................................................................................................................................................19143.004300314000000000000000000100000000000010000000100000010000000210000000100000000000
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18140.004000390000000000000000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24138.003820161000000000020000000600010100000000001000000000100100000000600000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................23137.003730021000000000000000000000000000000000000000000000011000000010100000000000000000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCA......................................................................................................................................................................22135.003520220000000000001000000100000000000000000000000000000000000010701000000000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................21129.002900280000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24127.002710140000000000010000002001000000000000000000001000000000000000200000112000000001
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20125.002500250000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCT......................................................................................................................................................................21124.002400700000000000100001000000000100000000000000000000000000100001100000000002000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCCC.......................................................................................................................25124.002400220000000000000000000010000000000000000000000000000000000000001000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................24123.002300182000000000000000002000000000000000000000000000000000000000001000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................21120.002000911000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCC......................................................................................................................................................................21118.00180080000000000000001004010000000000000002000000000000000000000200000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTCC........................................................................................................................23117.001700170000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT..........................................................................................................................24116.001600150000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................20114.00140080000000000000000000100000000000000000000000000000000000030200000000000000000
.............................................................................................................................................................CAAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................24114.00140062000000000000000000000000000000000000000000020000100000200100000000000000000
..................................................................................................................................................................AGAATAGCAGGCTTATCACA....................................................................................................................................................................20114.001400100000000000000010000000000000000000001000000000000000000010100000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGG.........................................................................................................................23113.001300130000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATC.......................................................................................................................................................................21112.00122071000000000000010001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTAC.............................................................................................................................18112.001200120000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20111.00110037000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACA............................................................................................................................20111.00110090000000000000000100000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTC...........................................................................................................................20111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTAGAATAGCAGGCTTATC.......................................................................................................................................................................19110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTTC........................................................................................................................23110.00100090000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................2419.0090041000000000000000000000000000000000000000002000000000000200000000000000000000
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1819.0090090000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CTTCTATTCTACTTT..........................................................................................................................1518.0080000000000000000000000000000000000000000000000000000001250000000000000000000000
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTAA........................................................................................................................2318.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA........................................................................................................................2418.0080060000000000020000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAT.....................................................................................................................................................................2218.0080040000000000000000000000000000000000000000000000000000000000400000000000000000
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTA...........................................................................................................................2118.0080061000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................AGTAGAATAGCAGGCTTA.........................................................................................................................................................................1817.0071030000000000001000000000000000000000000000000000000000000020000000000000000000
.............................................................................................................................................................CAAGTAGAATAGCAGGCTTATC.......................................................................................................................................................................2217.0070042000000000000000000000000000000000000000000000000000000000100000000000000000
droMoj3
GTGTC-G-------------CGAGTG----------AGTTTTGA----------------------------------TTTC--G-------AGC-----------------AAAATGTGTTTTCCCTGTGATT---CTCAGTCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTACCATTTG-ACCGAGTGTGAGATTCTTCTATTCTACTTTCGACAAGCACCAGTCAGCGTC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................221790393.0079039334644149589443058382
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................21140286.00402863015924111002873
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................22139304.003930474100392290
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................21132590.00325903144110011480
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................2318399.00839927591103162420932404
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................2314016.004016257840014286
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................2013150.00315030040001460
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................2012678.002678229260332651
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................2012520.0025202484000360
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2211348.00134859417031409171
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................191770.007706050001650
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................231687.00687610101750
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................211592.00592318243522220
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................181400.004002230001770
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................231300.00300652002330
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................221281.00281266000150
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................231278.0027827100070
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................211257.0025770002500
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................231228.0022822700010
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................221227.00227300001970
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................191196.00196101100940
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................191178.0017817800000
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................221163.0016315700015
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................191151.0015114600050
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................201123.00123546022833
......................................................................................................................................................................................TGTACCATTTG-ACCGAGTG................................................................................................................................................191115.00115192600619
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTC..........................................................................................................................211114.0011420001120
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................20177.00771000760
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................21177.00771824002213
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................22150.005031000190
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22150.00505000000
................................................................................................................................................................GTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................21147.00474600001
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................24146.00464300030
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................19145.004534001010
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................23134.003416000414
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTGC..........................................................................................................................22131.00310000310
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................18129.00292500013
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................24129.00291810073
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTC..........................................................................................................................20128.00280000280
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT..........................................................................................................................24126.002612000140
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................18124.00242400000
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................21124.00242300010
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTC..........................................................................................................................19122.00220000220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................24122.002211000110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTCC..........................................................................................................................22121.00210000210
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................22119.00191900000
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................22117.00171700000
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................24116.00161200022
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................20116.00161600000
droGri2
GTGTC-G------------------------------TCCTCTGTGTGATCGATTTAGTGAAAAAAAATAA--ATAAATATGTAAATTCAAATATGTTTCCACGTGTGTGCAGGTTTTATGGTTTTTGTT---TTACTCTGATCGGTGTGGAT-TGGCAAGTAGAATAGCAGGCTTATCACATGTAACATTCG-ACATGGTGTGAGATTCTTCTATTCTACTTTCGACAAACACCAGCTAGCGTCACATT------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTT..........................................................................................................................22143260.00432604317486
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTT..........................................................................................................................2113828.00382838280
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTT...........................................................................................................................2112915.00291529069
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACA....................................................................................................................................................................231879.00879533346
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTT.........................................................................................................................231710.007107046
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTT...........................................................................................................................201255.002552550
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACT............................................................................................................................201245.002452441
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTT..........................................................................................................................201129.001291290
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTA.........................................................................................................................23195.0095950
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTT.........................................................................................................................22170.0070700
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTG.........................................................................................................................23167.0067670
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................22147.00473710
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTT..........................................................................................................................19146.0046460
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTT..........................................................................................................................18140.0040400
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCA......................................................................................................................................................................21131.00311021
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTTT..........................................................................................................................23130.0030300
................................................................................................................................................................GTAGAATAGCAGGCTTATCACA....................................................................................................................................................................22129.0029290
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTC.........................................................................................................................23127.0027270
......................................................................................................................................................................................TGTAACATTCG-ACATGGTG................................................................................................................................................19121.0021210
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTAC.............................................................................................................................19114.0014131
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTA.........................................................................................................................22110.0010100
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTA..........................................................................................................................22110.0010100
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACT............................................................................................................................19110.0010100
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTG.........................................................................................................................2219.00990
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTT........................................................................................................................2419.00990
............................................................................................................................................................................................................AGATTCTTCTATTCTACTT...........................................................................................................................1918.00880
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTG..........................................................................................................................2216.00660
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTA..............................................................................................................................1816.00660
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTC..........................................................................................................................2215.00550
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACC....................................................................................................................................................................2315.00514
...............................................................................................................................................................AGTAGAATAGCAGGCTTATC.......................................................................................................................................................................2014.00422
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAA........................................................................................................................2414.00440
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACT....................................................................................................................................................................2314.00404
.................................................................................................................................................................TAGAATAGCAGGCTTATCACA....................................................................................................................................................................2113.00330
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACG....................................................................................................................................................................2313.00303
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTA........................................................................................................................2413.00330
........................................................................................................................................................................................................TGTGAGATTCTTCTATTCTACTTT..........................................................................................................................2412.00220
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAA...................................................................................................................................................................2412.00220
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTC.........................................................................................................................2212.00220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTCC.......................................................................................................................2512.00220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGT........................................................................................................................2412.00220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTC...........................................................................................................................2112.00220
............................................................................................................................................................................................................AGATTCTTCTATTCTACTTTT.........................................................................................................................2112.00220
...................................................................................................................................................................GAATAGCAGGCTTATCACA....................................................................................................................................................................1912.00220
............................................................................................................................................................................................................AGATTCTTCTATTCTACT............................................................................................................................1812.00220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTAC........................................................................................................................2412.00220
.............................................................................................................................................................................................................GATTCTTCTATTCTACTTTT.........................................................................................................................2012.00220
.............................................................................................................................................................................................................GATTCTTCTATTCTACTT...........................................................................................................................1812.00220
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTTC.......................................................................................................................2512.00220
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAT...................................................................................................................................................................2412.00211
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGC........................................................................................................................2411.00110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATC..................................................................................................................................................................2511.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTAC.......................................................................................................................2511.00110
.........................................................................................................................................................................................................GTGAGATTCTTCTATTCTACTT...........................................................................................................................2211.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGTG.......................................................................................................................2511.00110
....................................................................................................................................................................AATAGCAGGCTTATCACAT...................................................................................................................................................................1911.00110
.................................................................................................................................................................TAGAATAGCAGGCTTATCA......................................................................................................................................................................1911.00101
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTTGC........................................................................................................................2311.00110
..............................................................................................................................................................................................................ATTCTTCTATTCTACTTTA.........................................................................................................................1911.00110
...........................................................................................................................................................................................................GAGATTCTTCTATTCTACTTA..........................................................................................................................2111.00110
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2311.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCAG.......................................................................................................................2511.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTACG.......................................................................................................................2511.00110
................................................................................................................................................................GTAGAATAGCAGGCTTATCA......................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTCTT.......................................................................................................................2511.00110
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATC.......................................................................................................................................................................2111.00101
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACC............................................................................................................................2011.00110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAC...................................................................................................................................................................2411.00110
.................................................................................................................................................................TAGAATAGCAGGCTTATCAC.....................................................................................................................................................................2011.00110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACAAA..................................................................................................................................................................2511.00110
...............................................................................................................................................................AGTAGAATAGCAGGCTTATCACATAG.................................................................................................................................................................2611.00110
..............................................................................................................................................................AAGTAGAATAGCAGGCTTATCA......................................................................................................................................................................2211.00110
...............................................................................................................................................................AGTAGAATAGCAGGCTTAT........................................................................................................................................................................1911.00110
.......................................................................................................................................................................................GTAACATTCG-ACATGGTG................................................................................................................................................1811.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTATC.......................................................................................................................2511.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGT.........................................................................................................................2311.00110
...........................................................................................................................................................................................CATTCG-ACATGGTGTGAGA...........................................................................................................................................1911.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTTTG.......................................................................................................................2511.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGCT.......................................................................................................................2511.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTGGA........................................................................................................................2411.00110
...........................................................................................................................................................................................................GAGATTCTTCTATTCTAC.............................................................................................................................1811.00110
.................................................................................................................................................................TAGAATAGCAGGCTTATCACATGT.................................................................................................................................................................2411.00110
..................................................................................................................................................................AGAATAGCAGGCTTATCAC.....................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................TGAGATTCTTCTATTCTACTTTGA........................................................................................................................2411.00110
......................................................................................................................................................................................................GGTGTGAGATTCTTCTATTCTACTTTA.........................................................................................................................2711.00110
...............................................................................................................................................................................................................TTCTTCTATTCTACTTTT.........................................................................................................................1840.50220

Generated: 10/20/2015 at 07:35 PM