ID:

dse_189

 Coordinate:

scaffold_11:1487361-1487438 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

5pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -26.1 -26.0

Flybase annnotation

utr5 [utr5_plus_8998]; utr5 [utr5_plus_8999]

No Repeatable elements found

Sense Strand Reads

CTCCAAAGAAGTCGGGGTTCGATCGCAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCATATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGGTTCGACGTTCATGTGAAGATTAAAAATGT

***********************************.(((...((((((.((((((((((..(((.((((.((.......((((..........))))......)).)))).)))..))))))))))))))))...)))...************************************* 		Read size # Mismatch Hit Count Total Norm Total V115

head

 M054

female body

 V114

embryo

 V113

male body
..................................................TTGGGATTTTTTAGATCAGC............................................................................................................ 20 0 1 1541.00 1541 1537 1 2 1
..................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................... 22 0 1 924.00 924 910 7 5 2
................................................GGTTGGGATTTTTTAGATCAGC............................................................................................................ 22 0 1 538.00 538 538 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................... 22 0 1 393.00 393 392 0 1 0
..................................................TTGGGATTTTTTAGATCAGCA........................................................................................................... 21 0 1 275.00 275 273 1 1 0
..................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................... 23 0 1 228.00 228 227 0 1 0
..................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................... 23 1 1 189.00 189 188 0 0 1
...................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................... 21 0 1 186.00 186 185 0 0 1
........................................................................................................TACTGGCCTACTAAGTCCCA...................................................... 20 0 1 147.00 147 143 4 0 0
................................................GGTTGGGATTTTTTAGATCAG............................................................................................................. 21 0 1 74.00 74 73 0 0 1
........................................................................................................TACTGGCCTACTAAGTCCCAA..................................................... 21 0 1 72.00 72 67 5 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAAC.................................................... 22 0 1 71.00 71 65 6 0 0
................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................... 23 0 1 61.00 61 61 0 0 0
.................................................GTTGGGATTTTTTAGATCAGC............................................................................................................ 21 0 1 49.00 49 49 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................... 22 1 1 46.00 46 46 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................... 24 0 1 42.00 42 40 1 1 0
..................................................TTGGGATTTTTTAGATCAG............................................................................................................. 19 0 1 41.00 41 41 0 0 0
................................................GGTTGGGATTTTTTAGATCA.............................................................................................................. 20 0 1 33.00 33 33 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................... 22 1 1 31.00 31 30 0 0 1
...................................................TGGGATTTTTTAGATCAGC............................................................................................................ 19 0 1 30.00 30 30 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCC....................................................... 19 0 1 28.00 28 28 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGAT........................................................................................................ 24 1 1 27.00 27 27 0 0 0
..................................................TTGGGATTTTTTAGATCA.............................................................................................................. 18 0 1 17.00 17 17 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGTT........................................................................................................ 23 0 1 15.00 15 15 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCAACA................................................... 22 0 1 11.00 11 9 2 0 0
...................................................TGGGATTTTTTAGATCAGCA........................................................................................................... 20 0 1 9.00 9 8 0 0 1
.........................................................................................................ACTGGCCTACTAAGTCCCAAC.................................................... 21 0 1 8.00 8 8 0 0 0
.................................................GTTGGGATTTTTTAGATCAG............................................................................................................. 20 0 1 8.00 8 8 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................... 23 1 1 8.00 8 8 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................... 22 1 1 8.00 8 8 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTT........................................................................................................ 24 0 1 8.00 8 8 0 0 0
..................................................TTGGGATTTTTTAGATCAGA............................................................................................................ 20 1 1 7.00 7 7 0 0 0
................................................GGTTGGGATTTTTTAGATCAGA............................................................................................................ 22 1 1 6.00 6 6 0 0 0
..................................................TTGGGATTTTTTAGATCAGCT........................................................................................................... 21 1 1 6.00 6 6 0 0 0
................................................GGTTGGGATTTTTTAGATC............................................................................................................... 19 0 1 6.00 6 6 0 0 0
..................................................TTGGGATTTTTTATATCAGC............................................................................................................ 20 1 1 6.00 6 6 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................... 24 1 1 6.00 6 6 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAAT.................................................... 22 1 1 6.00 6 6 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAACT................................................... 23 1 1 4.00 4 4 0 0 0
..................................................TTGGGATTTTTTAGATCAGT............................................................................................................ 20 1 1 4.00 4 4 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................... 22 1 1 4.00 4 4 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAAA.................................................... 22 1 1 4.00 4 2 2 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCA...................................................... 19 0 1 3.00 3 2 1 0 0
................................................GCTTGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 3.00 3 3 0 0 0
..................................................TTGGGACTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 3.00 3 3 0 0 0
..................................................TTGGGATTTTTTAGATCACC............................................................................................................ 20 1 1 3.00 3 3 0 0 0
..................................................TTGGTATTTTTTAGATCAGC............................................................................................................ 20 1 1 3.00 3 3 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGTTT....................................................................................................... 24 1 1 3.00 3 3 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCAA..................................................... 20 0 1 3.00 3 3 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCAACAT.................................................. 23 0 1 3.00 3 3 0 0 0
..................................................TTGGGATATTTTAGATCAGCAG.......................................................................................................... 22 1 1 3.00 3 3 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAT..................................................... 21 1 1 3.00 3 3 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................... 22 1 1 3.00 3 3 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAACA................................................... 23 0 1 3.00 3 3 0 0 0
..................................................TGGGATTTTTTTAGATCAGCAG.......................................................................................................... 22 3 2 3.00 6 5 0 1 0
................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................... 24 1 1 3.00 3 3 0 0 0
..................................................TTGGGATTTTTTAGATTAGC............................................................................................................ 20 1 1 3.00 3 3 0 0 0
..................................................TTGGGATTTTTTAGATCATC............................................................................................................ 20 1 1 3.00 3 3 0 0 0
..................................................TGGGATTTTTTTAGATCAGCAGT......................................................................................................... 23 3 2 2.50 5 5 0 0 0
..................................................TTGGGATTTTTTAGATCCGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGACCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTACATCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................GTGGGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 1 1 0 0
..................................................TTGTGATTTTTTAGATCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
.................................................CTTGGGATTTTTTAGATCAGC............................................................................................................ 21 1 1 2.00 2 1 1 0 0
..................................................TTGGGATTTTTTAGATCATCAGA......................................................................................................... 23 2 1 2.00 2 2 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAGA......................................................................................................... 25 1 1 2.00 2 2 0 0 0
................................................TGTTGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 2.00 2 2 0 0 0
...................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................... 21 1 1 2.00 2 2 0 0 0
..................................................ATGGGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGCTCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................ATGGGATTTTTTAGATCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................TCGGGATTTTTTAGATCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAGCATT......................................................................................................... 23 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................... 23 2 1 2.00 2 2 0 0 0
...................................................AGGGATTTTTTAGATCAGCAG.......................................................................................................... 21 1 1 2.00 2 2 0 0 0
.................................................GTTGGGATTTTTTAGATC............................................................................................................... 18 0 1 2.00 2 2 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................... 25 0 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATAAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTAGGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
................................................GGTTTGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 2.00 2 2 0 0 0
...........................................................................................................TGGCCTACTAAGTCCCAACA................................................... 20 0 1 2.00 2 2 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCTT..................................................... 21 2 1 2.00 2 1 0 1 0
...................................................TGGGATTTTTTAGATCAGCAGAT........................................................................................................ 23 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCATCAGT......................................................................................................... 23 1 1 2.00 2 2 0 0 0
...................................................AGGGATTTTTTAGATCAGCAGT......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATCTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGTATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTGGATCAGC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
..................................................CTGGGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAAC............................................................................................................ 20 1 1 2.00 2 2 0 0 0
................................................GGTTGGGATTTTTTAGATCAGT............................................................................................................ 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................... 23 1 1 2.00 2 2 0 0 0
..................................................TTGAGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCATCAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
................................................GGTTTGGATTTTTTAGATCAGCA........................................................................................................... 23 1 1 2.00 2 2 0 0 0
................................................GGCTGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAGCG........................................................................................................... 21 1 1 2.00 2 2 0 0 0
..................................................TTGGGATTTTTTAGATCAGAAG.......................................................................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TTTGGATTTTTTAGATCAGC............................................................................................................ 20 1 2 1.50 3 3 0 0 0
..................................................TTGGGCTTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATATTTTAGATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGAATTTTTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGCTA....................................................................................................... 24 1 1 1.00 1 1 0 0 0
.........................................................................TATTGCTATATAGCCATATTTATAAAT.............................................................................. 27 0 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCT...................................................... 20 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCTGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAATTT.................................................. 24 2 1 1.00 1 1 0 0 0
..................................................CTGGGATTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
..................................................TTTGGATTTTTTAGATCAGCAGA......................................................................................................... 23 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTACATCAGCAGAT........................................................................................................ 24 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTACATCAGCAGTT........................................................................................................ 24 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTCT....................................................................................................... 25 2 1 1.00 1 1 0 0 0
..................................................TGGGATTTTTTTAGATCAGCAGTT........................................................................................................ 24 3 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCACCAGA......................................................................................................... 23 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGACCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................ATGGGATTTTTTAGATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGGTCAGCAG.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAAAA........................................................................................................ 24 3 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGCTCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGAATTTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCACT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAACG................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTACACCAGC............................................................................................................ 20 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTTTG...................................................................................................... 26 2 1 1.00 1 1 0 0 0
..................................................TTGGGATCTTTTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................TGGGAATTTTTAGATCAGC............................................................................................................ 19 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGAA........................................................................................................ 24 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGAAC....................................................................................................... 25 3 1 1.00 1 1 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCAA...................................................... 19 1 1 1.00 1 0 1 0 0
..................................................TTGGGATTTTTTATATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TAGAGATTTTTTAGATCAGCAG.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
........................................................................TTATTGCTATATAGCCATATT..................................................................................... 21 0 1 1.00 1 1 0 0 0
................................................GGTTGGGATATTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTACATCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGACCAGCAG.......................................................................................................... 24 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATTAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAGC......................................................................................................... 25 1 1 1.00 1 1 0 0 0
...................................................CGGGATTTTTTAGATCAGCAG.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTAGGATTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
........................................................................................................TCCTGGCCTACTAAGTCCCAAC.................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTCTAGATCAGCAGA......................................................................................................... 23 2 1 1.00 1 1 0 0 0
................................................GGGTAGGATTTTTTAGATCAGCAA.......................................................................................................... 24 3 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCCG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGGTCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................GGTCGGGATTTTTTAGATCAGCA........................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAAA......................................................................................................... 23 2 1 1.00 1 1 0 0 0
..................................................TTTGGATTTTTTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGACCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTATATCAACAGA......................................................................................................... 23 3 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTATTAAGTCCCAA..................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGCTCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTGGATCAGC............................................................................................................ 19 1 1 1.00 1 1 0 0 0
................................................GGTTGAGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
................................................GGTTGTGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
................................................GGTAGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGGTTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTAAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGTTTT...................................................................................................... 25 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCATACTAAGTCCCAA..................................................... 21 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTCTTAGATCAGCAG.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
................................................GGTTGTGATTTTTTAGATCA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0
..................................................TTGGGATCTATTAGATCAGCAGAT........................................................................................................ 24 3 1 1.00 1 1 0 0 0
................................................GGTTGGGCTTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGACTACTAAGTCCCAAC.................................................... 22 1 1 1.00 1 0 1 0 0
..................................................TTGGGATTTTTTAGACCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGCATTTTTTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTATTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
.................................................GTTGGGATTCTTTAGATCAG............................................................................................................. 20 1 1 1.00 1 1 0 0 0
..................................................TTGTGATTTTTTAGATCA.............................................................................................................. 18 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGTA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
........................................................................CTATTGCTATATAGCCATATTT.................................................................................... 22 1 1 1.00 1 1 0 0 0
................................................GCTTGGGATTTTTTAGATCAGCA........................................................................................................... 23 1 1 1.00 1 0 1 0 0
................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................... 23 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCGA.......................................................................................................... 24 2 1 1.00 1 1 0 0 0
..................................................TTTGGATTTTTTAGATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTATATCAGCAGTT........................................................................................................ 23 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGAACAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGG............................................................................................................ 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTGAGATCAGCAG.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAA.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTTGGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 0 1 0 0
..................................................TTGGGATTTTTTAGATCAGCGG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTCTTTAGATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTCTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATGAGC............................................................................................................ 22 1 1 1.00 1 0 0 0 1
...............................................CGGTTGGGATTTTTTAGATCAGCA........................................................................................................... 24 1 1 1.00 1 1 0 0 0
..................................................TTGGTATTCTTTAGATCAGC............................................................................................................ 20 2 1 1.00 1 1 0 0 0
...................................................TGGGATTCTTTAGATCAGCAGAT........................................................................................................ 23 2 1 1.00 1 1 0 0 0
................................................GGTTGAGATTTTTTAGAAAAGC............................................................................................................ 22 3 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTGCTAAGTCCCA...................................................... 20 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................................................................................TAAGTCCCAACATAATGAGAGT......................................... 22 0 1 1.00 1 1 0 0 0
........................................................................................................TACTGGACTACTAAGTCC........................................................ 18 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTGGATCACC............................................................................................................ 20 2 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCATT.................................................... 22 2 2 1.00 2 2 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCTT...................................................... 19 2 1 1.00 1 1 0 0 0
..................................................TTGGGATCTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGCTCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGTATTTTTTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTTGATCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGTT........................................................................................................... 23 2 1 1.00 1 1 0 0 0
...................................................AAGGATTTTTTAGATCAGCAG.......................................................................................................... 21 2 1 1.00 1 1 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCAACT................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................GGATTTTTTAGATCAGCA........................................................................................................... 18 0 1 1.00 1 1 0 0 0
..................................................TTCGGATTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTATAGATCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGTG........................................................................................................ 23 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCAA...................................................... 20 1 1 1.00 1 1 0 0 0
................................................TGTTGGGATTTTTTAGATCAG............................................................................................................. 21 1 1 1.00 1 1 0 0 0
..................................................TTGGCATTTTTTAGATCAGCAT.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TTGGAATTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................AGTTGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGAATTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCATC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................ATGGGATTTTTTAGATCAGCAT.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCACAACA................................................... 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGGTCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGG............................................................................................................ 20 1 1 1.00 1 1 0 0 0
................................................GGTTGGTATTTTTTAGATCAGCAG.......................................................................................................... 24 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCAGCAGAA........................................................................................................ 26 2 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATCGGCAG.......................................................................................................... 24 1 1 1.00 1 1 0 0 0
...................................................GGGGATTTTTTAGATCAGCAGAT........................................................................................................ 23 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGATT....................................................................................................... 25 2 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCC........................................................ 18 0 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTCTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
.................................................CTTGGGATTTTTTAGATCAGCATT......................................................................................................... 24 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTCC....................................................................................................... 25 2 1 1.00 1 1 0 0 0
.........................................................................................................ACTGGTCTACTAAGTCCCAACA................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGGTCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
........................................................................................................TACTAGCCTACTAAGTCCCAA..................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTATATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
.................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................... 22 0 1 1.00 1 0 1 0 0
..................................................TTGGTATTTTTTAGATCATCAG.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTCTAGATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTAATTAGATCAGCAG.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTTTT...................................................................................................... 26 1 1 1.00 1 1 0 0 0
...................................................TGGGACTTTTTAGATCAGCAG.......................................................................................................... 21 1 1 1.00 1 1 0 0 0
................................................GGTTGGGATTATTTAGATCAGCA........................................................................................................... 23 1 1 1.00 1 1 0 0 0
................................................GTTTGGGATTTTTTAGATCAGCA........................................................................................................... 23 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGCAGTAT....................................................................................................... 25 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTACTAGATCAGC............................................................................................................ 20 2 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCGGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
...................................................TGGGACTTTTTAGATCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGCAGAA........................................................................................................ 23 2 1 1.00 1 1 0 0 0
..................................................TTGGGAATTTTTAGATCAGCAGT......................................................................................................... 23 1 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCAACGT.................................................. 24 1 1 1.00 1 1 0 0 0
..................................................TTGGGACTTTTTAGATCAGCAGA......................................................................................................... 23 2 1 1.00 1 1 0 0 0
...................................................TGGGATTTTTTAGATCAGAAGA......................................................................................................... 22 2 1 1.00 1 1 0 0 0
................................................GGTTGGGATTTTTTAGATAAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
................................................GATTGGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
................................................GGTTCGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTCTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
...................................................TGGGATATTTTAGATCAGCAGT......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGAGCAGCAG.......................................................................................................... 22 1 1 1.00 1 0 0 1 0
..................................................TTGGGGTTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTACTTAGATCAGCAG.......................................................................................................... 22 2 1 1.00 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGTCCCC...................................................... 20 1 1 1.00 1 1 0 0 0
................................................GGTTGGAATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGACTTTTTAGATCAGC............................................................................................................ 20 1 1 1.00 1 1 0 0 0
........................................................................................................TAATGGCCTACTAAGTCCCA...................................................... 20 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTATATCAGCA........................................................................................................... 21 1 1 1.00 1 1 0 0 0
..................................................TTGCGATTTTTTAGATCAGCAG.......................................................................................................... 22 1 1 1.00 1 1 0 0 0
....................................................TGGATTTTTTAGATCAGCAGT......................................................................................................... 21 1 1 1.00 1 1 0 0 0
................................................GGTTAGGATTTTTTAGATCAGC............................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................TTGGGATTTTTTAGATACGC............................................................................................................ 20 2 2 0.50 1 1 0 0 0
..................................................TTGGGATTTAATAGATCAGC............................................................................................................ 20 2 2 0.50 1 1 0 0 0
........................................................................................................TACTGGCCTACTAAGCCCCAT..................................................... 21 2 2 0.50 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAGTT........................................................................................................... 21 2 2 0.50 1 1 0 0 0
.........................................................................................................ACTGGCCTACTAAGTCCCATT.................................................... 21 2 2 0.50 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCAAAAG.......................................................................................................... 22 2 2 0.50 1 1 0 0 0
...................................................TTGGGATTTTTAGATCAGCAG.......................................................................................................... 21 3 4 0.25 1 1 0 0 0
..................................................TTGGGATTTTTTAGATCACAG........................................................................................................... 21 3 4 0.25 1 1 0 0 0
.............................................................................................................................GATGATGAGAGTAAAAAC................................... 18 2 9 0.11 1 1 0 0 0
..................................................TGGGATTTTTTTAGATCAGCA........................................................................................................... 21 3 10 0.10 1 1 0 0 0
..................................................TGGGATTTTTTTAGATCAGC............................................................................................................ 20 3 16 0.06 1 1 0 0 0
...................................................TTGGGATTTTTAGATCAGCA........................................................................................................... 20 3 20 0.05 1 1 0 0 0
...................................................TGGGATTTATTAGATCAGC............................................................................................................ 19 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAGGTTTCTTCAGCCCCAAGCTAGCGTTAGGCACACACGGGGGTAATACCAACCCTAAAAAATCTAGTCGTCAATAACGATATATCGGTATAAATATTTAGAAGATGACCGGATGATTCAGGGTTGTATTACTCTCATTTTTGGTGTCCAAGCTGCAAGTACACTTCTAATTTTTACA

*************************************.(((...((((((.((((((((((..(((.((((.((.......((((..........))))......)).)))).)))..))))))))))))))))...)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_11:1487311-1487488 + dse_189 confident CTC-----CAA---------------AGAAGTCGGGG----T-TCGATCGCAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAAAA-------ATG--T
droSim2 3l:21084394-21084571 + dsi-mir-193 Known_mirbase CTC-----CAA---------------AGAAGTCGGGG----T-TCGATCGCAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAAAA-------ATG--T
dm3 chr3L:21567082-21567259 + dme-mir-193 Known_mirbase CTC-----CAA---------------AGAAGTCGGGT----T-TTGATCGCAATCCGTGTGTGCCCTTATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAGAA-------AAA--T
droEre2 scaffold_4784:21221169-21221350 + der_131 confident CTC-----TAA---------------AGAAGTCGGGT----T-TTAATCGGAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TT-----GA-----A----TATTAAAAAAAAAAATAGTAG
droYak3 v2_chr3L_random_283:15531-15705 + dya_104 confident CTC-----TAA---------------AGAAGTCGGGT----T-TTGATCGGAATCCGTGAGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTGATGTGA-----A----GATTACAA-------A-----
droEug1 scf7180000409472:386325-386504 + CCT-----TAAA--------------AGAAGTCGGGA----C-TTATTCGAAATCCGCGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATA-------ATGGTGTTA-----A----ACTTATAA-------ATC--T
droBia1 scf7180000302377:1758723-1758899 - CCA-----CAAA--------------AGGAGTCGGCG----T-TTGATCGAGATACGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATGTAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAAAATC-CGACG-------TTGGCGTGA-----A----CAGTAAAA-------A-----
droTak1 scf7180000415388:255431-255597 + CTT-----AAC---------------AGGTGTCAGGG----C-TTAATC-------GTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTGTATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAAAGTT-CA----------TTAATGCAA-----T----AAT--AAA-------AAG--T
droEle1 scf7180000491255:2722742-2722920 - CTT-----TAAA--------------TAAAGTCGGTT----TCTTGTTAGAAATAC--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATTTCGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATA-------ATAAAGTGC-----A----CCTGGTGA-------ACT--T
droRho1 scf7180000780059:195346-195523 - TTT-----AAA---------------AGAAGTCGGTT----TCTTGATCGAAATCC--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACTTCGCCA-T-ATTTATAAATTTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATG-------ATGAAGTGC-----A----GTTAGTGA-------ATA--T
droFic1 scf7180000453831:395550-395724 + TTT-----TAA---------------AGAAATCAGTG----C-CAGATCGAAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTAT--AGCCA-T-ATTTATTATTAATCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCGCAGG-CCATGTCA-------GTAGAATGT-----------CTTAAAA-------GTG--T
droKik1 scf7180000302694:467018-467185 + CTT-----AAAT--------------ATAAGCTGG-----------------TTCTGTGTGTGCCCTCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACATTGCCA-T-ATTTTTAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-TTGCAATA-------ATGGTGTGC-----C----AATTGTAA-------ATG--C
droAna3 scaffold_13337:17070805-17070969 - dan_319 confident GAA-----CAA---------------TGAAGT----T----C-CGAATCGAAATCTGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCA-T-ATTCATAAATTCTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTAT----T------------------GA-----AAATAAAATACAA-------ATT--T
droBip1 scf7180000396641:558563-558731 - ATCTTGAACAA---------------TGAAGT----A----T-CGAATCCAAATCTGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCA-T-ATTCATATATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTAG-TTATGAT---------------------------AATTATTG-------AAA--T
dp5 XR_group6:2746020-2746206 - dps-mir-193 Known_mirbase CTG-----CAGACGCGAGGGTCAACCATAAGACGTGTAAAAC-TCAATTGGAATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCG-T-ATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-CT-TAACA-------ATAA---------------GAC----T-------ATG--T
droPer2 scaffold_9:1042471-1042672 - dpe_20 confident CTG-----CAAACGCGAGGGTCAACTATAAGACGTGTAAAAC-TCAATTGGAATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCG-T-ATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-CT-TAACA-------ATAAGACTATGTTAA----AATGAGTG-------AAG--T
droWil2 scf2_1100000004540:1082180-1082325 - dwi_124 confident C--------------------------------------------------AATCTGTGTGTGCGCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACAA-GTCAAAAATTTAT-TATCATCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTG-------ACGAAATGAATTTATGTGA-----A----AA------------------T
droVir3 scaffold_13049:17910652-17910767 + dvi-mir-193 Known_mirbase --------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATATATATATG-T-A-TCGTAAATCTTCTACTGGCCTACTAAGTCTCAATATAATGGGAGTAAAAACCTCAG---------------------------------------------------------
droMoj3 scaffold_6680:23178993-23179105 + dmo_328 confident --------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAATA-----T-TATCATAAGTTCTCTACTGGCCTACTAAGTCTCAATATAATGGGAGTAAACACCTCAG---------------------------------------------------------
droGri2 scaffold_10030:24062-24176 - dgr_57 candidate-rescued --------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAAGACCTT-T-A-TCGTAAATCTTCTACTGGCCTACTAAGTCCCAATATAATGGGAGTAAAACCCTCA----------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CTC-----CAA---------------AGAAGTCGGGG----T-TCGATCGCAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAAAA-------ATG--TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2011541.0015411121537
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................221924.00924725910
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................221538.00538000538
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221393.00393001392
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211275.00275101273
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231228.00228001227
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................231189.00189010188
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211186.00186010185
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................201147.00147400143
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................21174.007401073
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................21172.007250067
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................22171.007160065
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................23161.006100061
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................21149.004900049
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................22146.004600046
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................24142.004210140
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19141.004100041
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................20133.003300033
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22131.003101030
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19130.003000030
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................19128.002800028
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................18117.001700017
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23115.001500015
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22111.00112009
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................2019.0090108
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2118.0080008
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................2018.0080008
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2318.0080008
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2218.0080008
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2418.0080008
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2017.0070007
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2216.0060006
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................2116.0060006
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................1916.0060006
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2416.0060006
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................2216.0060006
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................2314.0040004
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2014.0040004
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................2214.0040004
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2214.0042002
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................1913.0031002
............................................................................TGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2413.0030003
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................2013.0030003
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................2313.0030003
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................2113.0030003
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2213.0030003
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2313.0030003
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2413.0030003
.........................................................................GGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2512.0020002
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................2112.0020002
...........................................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................................................2312.0020002
..........................................................................GTTGGGATTTTTTAGATC............................................................................................................................................1812.0020002
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2512.0020002
......................................................................................................................................TGGCCTACTAAGTCCCAACA..............................................................................2012.0020002
...................................................................................................................................TACTGGCCTACTAAGTCCCTT................................................................................2112.0020011
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2212.0020002
...........................................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................................................2312.0020002
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2112.0020002
..................................................................................................TATTGCTATATAGCCA-T-ATTTATAAAT.........................................................................................................2711.0010001
...................................................................................................................................TACTGGCCTACTAAGTCCCT.................................................................................2011.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAGTCT....................................................................................................................................2511.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAAAA.....................................................................................................................................2411.0010001
...................................................................................................................................TACTGGCCTACTAAGTCCCAACG..............................................................................2311.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAGTTTG...................................................................................................................................2611.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2311.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAGAA.....................................................................................................................................2411.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAGAAC....................................................................................................................................2511.0010001
.................................................................................................TTATTGCTATATAGCCA-T-ATT................................................................................................................2111.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2511.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAAA......................................................................................................................................2311.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................................................2311.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGCGA.......................................................................................................................................2411.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGG.........................................................................................................................................2211.0010001
............................................................................TGGGATTTTTTAGATCAGCAA.......................................................................................................................................2111.0010001
............................................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................................................2111.0010001
..............................................................................................................................................TAAGTCCCAACATAATGAGAGT....................................................................2211.0010001
...................................................................................................................................TACTGGCCTACTAAGTCCCATT...............................................................................2221.0020002
....................................................................................................................................ACTGGCCTACTAAGTCCTT.................................................................................1911.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGTT........................................................................................................................................2311.0010001
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................2211.0010001
..............................................................................GGATTTTTTAGATCAGCA........................................................................................................................................1811.0010001
............................................................................TGGGATTTTTTAGATCAGCAGTG.....................................................................................................................................2311.0010001
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................2011.0010001
.........................................................................GGTTGGGATTTTTTAGATCAGCAGAA.....................................................................................................................................2611.0010001
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................1811.0010001
...........................................................................TTGGGATTTTTTAGATCAGCAGTCC....................................................................................................................................2511.0010001
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2211.0011000
...........................................................................TTGGGATTTTTTAGATCAGCAGTAT....................................................................................................................................2511.0010001
............................................................................TGGGATTTTTTAGATCAGCAGAA.....................................................................................................................................2311.0010001
...................................................................................................................................TACTGGCCTACTAAGTCCCC.................................................................................2011.0010001
...........................................................................TTGGGATTTTTTAGATCAGTT........................................................................................................................................2120.5010001
....................................................................................................................................ACTGGCCTACTAAGTCCCATT...............................................................................2120.5010001
...........................................................................TTGGGATTTTTTAGATCACAG........................................................................................................................................2140.2510001
droSim2
CTC-----CAA---------------AGAAGTCGGGG----T-TCGATCGCAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAAAA-------ATG--TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................20111546.00115461104515270445302000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................2216117.006117110001133587300000000000
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2214547.00454742916601423000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................2011870.001870800129183200000000000
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2211830.00183056620321122920241000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................2311539.001539200033150400000000000
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................2111426.00142638200114102900000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................2211168.001168500034112900000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................211888.0088880002585500000000000
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................181771.00771270011872500000000000
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................191619.00619410001556300000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................211619.0061960001859500000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231494.00494332301215500010000000
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................191427.0042778100834000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................191419.004191000641200000000000
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................181375.0037510000735800000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................201288.002880001528200000000000
.........................................................................GGTTGGGATTTTTTAGAT.............................................................................................................................................181253.002534000324600000000000
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211236.002360000522900110000000
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221223.002230000221413120000000
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231190.0019058000312900000000000
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................211173.0017313801013300000000000
....................................................................................................................................ACTGGCCTACTAAGTCCC..................................................................................181167.001675000415800000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACAT.............................................................................211161.001610000915200000000000
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................211149.001491490000000000000000
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................201143.001430000314000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................231138.001380000513300000000000
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................201117.0011712000110400000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................231103.001031020000000000001000
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241101.00101500029400000000000
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................21199.00991400058000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24195.00955610013700000000000
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................19191.00913600015300001000000
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................18184.0084000028200000000000
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23176.0076000017500000000000
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19167.0067200016400000000000
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22158.0058580000000000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACA..............................................................................20152.0052000005200000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................23142.0042420000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................................................23126.0026260000000000000000
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................20121.0021210000000000000000
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................20119.0019190000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACATA............................................................................24119.0019000001900000000000
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................22116.0016160000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACAT.............................................................................24113.0013000001300000000000
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................21112.0012120000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................25112.0012200001000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................22110.0010100000000000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACATA............................................................................2219.00900000900000000000
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2219.00990000000000000000
......................................................................................................................................TGGCCTACTAAGTCCCAA................................................................................1819.00900000900000000000
......................................................................................................................................TGGCCTACTAAGTCCCAAC...............................................................................1919.00900000900000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................2318.00880000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2118.00880000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2517.00750000000000002000
.........................................................................GGTTGGGATTTTTTAGATCAGG.........................................................................................................................................2216.00660000000000000000
.............................................................................GGGATTTTTTAGATCAGC.........................................................................................................................................1816.00660000000000000000
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................1915.00500000500000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2315.00510000400000000000
.......................................................................................................................................GGCCTACTAAGTCCCAAC...............................................................................1815.00500000500000000000
........................................................................TGGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2315.00540001000000000000
..........................................................................GTTGGGATTTTTTAGATC............................................................................................................................................1814.00400000400000000000
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2214.00420000200000000000
.............................................................................GGGATTTTTTAGATCAGCAG.......................................................................................................................................2014.00400000400000000000
............................................................................TGGGATTTTTTAGATCAGCAGTTAT...................................................................................................................................2514.00400000400000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGAA.....................................................................................................................................2413.00330000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2213.00330000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAAC...............................................................................2013.00300000300000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2413.00330000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2513.00330000000000000000
...............................................................................GATTTTTTAGATCAGCAG.......................................................................................................................................1812.00210000100000000000
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2012.00220000000000000000
.......................................................................ATGGTTGGGATTTTTTAGATC............................................................................................................................................2112.00220000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAAA......................................................................................................................................2312.00210000000001000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACATA............................................................................2512.00200000200000000000
.......................................................................................................................................GGCCTACTAAGTCCCAACAT.............................................................................2012.00200000200000000000
...........................................................................TTGGGATTTTTTAGATCAC..........................................................................................................................................1912.00220000000000000000
................................................................................ATTTTTTAGATCAGCAGT......................................................................................................................................1812.00220000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2312.00220000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTTA....................................................................................................................................2512.00200000200000000000
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2212.00220000000000000000
.......................................................................................................................................GGCCTACTAAGTCCCAACA..............................................................................1912.00200000200000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCT.................................................................................2012.00220000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................................................2312.00220000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGTTA....................................................................................................................................2412.00200000200000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACATAA...........................................................................2612.00200000200000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACC..............................................................................2312.00220000000000000000
..................................................................................................................................CTACTGGCCTACTAAGTCCCAAC...............................................................................2312.00200000200000000000
...........................................................................TTGGGATTTTTTAGATCT...........................................................................................................................................1812.00220000000000000000
......................................................................TATGGTTGGGATTTTTTAGATC............................................................................................................................................2212.00220000000000000000
.............................................................................GGGATTTTTTAGATCAGCAGT......................................................................................................................................2112.00200000200000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTC.....................................................................................................................................2412.00220000000000000000
.........................................................................GGTTGGGATTTTTTAGATCT...........................................................................................................................................2011.00110000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGACT....................................................................................................................................2511.00110000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGG......................................................................................................................................2511.00110000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGAC.....................................................................................................................................2411.00110000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAA................................................................................1911.00100000100000000000
.TC-----CAA---------------AGAAGTCGGGG----T-TC...........................................................................................................................................................................................1911.00100000000000001000
........................................................................TGGTTGGGATTTTTTAGATCAG..........................................................................................................................................2211.00100000100000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2611.00100000100000000000
...........................................................................TTGGGATTTTTTAGATCAGCACG......................................................................................................................................2311.00110000000000000000
.TC-----CAA---------------AGAAGTCGGGG----T-TCGA.........................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAACAT.............................................................................2211.00100000100000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACATAA...........................................................................2311.00100000100000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2311.00110000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAAAA.....................................................................................................................................2411.00110000000000000000
.TC-----CAA---------------AGAAGTCGGGG----T-T............................................................................................................................................................................................1811.00110000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACATAA...........................................................................2511.00100000100000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGAC.....................................................................................................................................2611.00110000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACGC.............................................................................2411.00110000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGTTATT..................................................................................................................................2611.00100000100000000000
..........................................................................GTTGGGATTTTTTAGATCAGA.........................................................................................................................................2111.00110000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCT..................................................................................1911.00110000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAATT..............................................................................2211.00110000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2411.00110000000000000000
..C-----CAA---------------AGAAGTCGGGG----T-TCGAA........................................................................................................................................................................................2111.00100000000000001000
...........................................................................TTGGGATTTTTTAGATCTT..........................................................................................................................................1980.13110000000000000000
dm3
CTC-----CAA---------------AGAAGTCGGGT----T-TTGATCGCAATCCGTGTGTGCCCTTATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTCATGTGA-----A----GATTAGAA-------AAA--TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................22118771.00187710000140000000003000100000041011203904894100001200100003212000005071100000000000000000203056000100100088009312000164710004302020006335562661434415342772940130400000000201316072141221010010000000010931304014111037666926465131279130746700000916210000000000000043000000100740030921927191002000041081376002243202410000121300111002911402115032110500114510972432554301929360254720851861350201011131530122161043810010400200
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................22110513.0010513000022200000000032828000003000492014722615528000000000000000000000028281000000000000000002423454111110112706267052146720182051747522112463181460511130134220912003554233000001000000000000000000000000000000106990868053361671592422147695570000010200000000005000000000000000000000101100300010000000190000119030000059000000000000000000000000000029142379103710000010143302010010110000016700000000000
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................2118259.00825900001000000000200200000000007820419122001100010000011010000035558000000000000000001000800000100002000490000001050003210000000118021122011134612091614617000002000002002400000000000000000000045362604621014025192489546313652600000329200000000000000000000000000401000061204100000002004101300013950140000055100110101302211060337161002229435126230700372120151153043490313231110000010043000100300100
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................2117948.007948000019031000000020010000010001511653662612100000000000000000000007341300000000000000000262229300101060104860011298820052630410191247610007022701011504333742000000000000000010000000000000000000122167010532168328569392114791226000002270000000000000000000000000000000010000100000000000011000000240300000650000000000000000100000000000321316101003100000030151000100000000000012900000100000
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................2117838.007838000012100000000100000000001007101692471000000000000000000000004855200000000000000000110153000000100094002603300003550004360100000414426128020103121591619212700000000002000000000000000000000000048762604290016027310185779511260420000043900000000000000000000000000001000010210300003100000329200091704010002830210100011110000000000100211251951451840023163001003804336000000020121010008200000103000
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................2016964.0069640000990010000002100800000000048372741844100000000000000000000007224200000000000000000101028500240050002781162073000324762008146330200314214011112610152741570000000000000000000000000000000000001181320911461212143929191403228800000448000000000000000000000000000000000000000000000000002900002410900000310000010000001000000000000000351419109001000000110025000000000001000008700000000000
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................2215886.00588600001000000000100000000005005377911000011001010010311210002544300000000000000000100090000010000290026010000130000010000000035670150168531455384000100000000200001120310200000000000013023201493025102383610234722900020510001000200000000000000003832200014335414100000000104784000175408400015230001020250211121413011080042330045124516221154798025131102107970119162060312603301577121011311210
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2015356.005356000040000000001000000000010013696401200000000000001001000042000000000000000000010014000000000070022000000760000000000000268251161251418149560560000000000000000000000030000000000001732280801076734732317446739000001770100000000000000000000000000000001010010000000000017170502053730381100095001011002302110100000000002243757048356500136100000115055580010140000000000023510000010110
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................2215153.00515300001170000000001000000000000672722130739500000010000000000000001180000000000000000001100183100420120103022182211500012269200454711501111001000000000030000000000010000000000000000000000003810029146739752413629104390020002200000000000000000000000000000001000010010000000000010000010000000900000000000000000000000000003554700000000000000210000000000000002400000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................2313001.003001000040000000001000000000000011597700000000000000000000000012413000000000000000000020150000000000240010411000021200001620100000334111807617043638510000000000000000000000000000000000001151800176007293165114703647000001350000000010000000000000000000000011010120000010000017030007420500000180000000100010000000010000000898867103009620020026020350000000000000000023900000000000
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2212636.002636000020000000000000000000000031242711000000000000000010000044100000000000000000210120000001000400800000047000000000000015380120418640173121000000000000000000000000000000000000069860571043331293652184800000960000000000000000000000000000100212001320001000000081077020222120170100012900000100010000001000002000001561319615500851012002417250010010001000000049300000412110
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................2112456.00245600000000000000000000000000010033441000000000010000000000003128000000000000000001001100000000001003000000400000000000000497100511404874936000000000000000000000000000000000000146132066114851037023482928000001400000000000000000000000000000000000000000000000000054610001430200000900000000000000000000000000011206411816900220000002207261100010000000000031900001000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2411954.00195400004000000000000000100000000000000000010000000000000000174120000000000000000000011000000000040014000000590000000000000319351401324920373263600000000000000000000000010000000000010713401400038671691108018530000005900000000000000000000000000000000103100200000000000049100023607000001301000000000000002100200000004847294600103200300121680200301100000000023000000110100
...........................................................................TTGGGATTTTTTAGATCAGCATC......................................................................................................................................2311580.0015800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928652000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCATC......................................................................................................................................2511344.0013440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882462000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2111308.001308000034000000000000000000000075317321000000000000000000000040000000000000000000220153000000200066002042400006890003252210100001100000000000000000000000000000000000000000000000990816844377551302000006000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000030290000000000000001000000000000000400000000000
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................2111304.00130400000000000000000000000000017120151100000000000000000000002010000000000000000000001000000000040021000000130000000000000017201000202351000000000000000000001000000000000000343015421926221173332143100010300000000000000000000000000000000000000000000000000117000005104000001000000000000001000000000000056537483002000000050173010001000000000022000100100000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................2311283.001283000025100000000100000000000032358341000000000000000000100003311200000000000000000000031100300300057011151100205060005110100003102010010010002000000000001000000000000000000000000212102265113456031241600000024000000000000000000000000000000000000001000100000000100000200000001700000001000000000000000000001396500012000000000000000000000000000900000100000
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................1911111.0011110000000000000000000000000000002020000000000000000000000000108000000000000000000000000000000000000400000020000000000000025500025102513319000000000000000000000000000000000000871160310022240210229212118000005000000000000000000000000000000000000000000000000000270000220100000100000001000000000000000000002818427500000000003022000000000000000002400000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................201969.009690000190000000000000000000000175461212210000000000000000000000800000000000000000000001590000001000530014511001035600007110000000000000000000000000000000000000000000000000000000010170331211195515745910000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011140000000000100000000000000000000400000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231949.0094900000000000000000000000000000000000000000000000000000000131600000000000000000000003000000000000050000003000010000000001740405417013012110000000000000040001000000000000000002040027008280260320147900000260000000000000000000000003000000000000000000000010019000022050000080000000000000000000100000100476235240015610010023038310200101000011000011000000200010
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................201776.00776000000000000000000000000000000111110000000000000000000000051320000000000000000000001100000000008002100000055000000000000001340302020192151200000000000000000000000000000000000067700390017140140681130500000520000000000000000000000000000000000000000000100000012000024000000030000000000010000000000000100513101700110000003044000000000000000001600000000000
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................191517.00517000000000000003002000001000001131400000000000000000000000043000000000000000000001029000000100022007221000016710010000000010310100000710200000000000000000000000000000000000042209004141130101800000028000000000000000000000000000000000000000000000000001500000802000005000000000000000000000000000051490000000000000000000000000000000900000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................231496.004960000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000070000000000000142020103191970000000000000000000000000000000000001013010008121901403860000014000000000000000000000000000000000000100000034230000001000012010000070000000000000000000000000000345035360053000000150137010100000000000004200000000000
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................201451.00451000000000000000000000000000000530000000000000000000000000000000000000000000010000000000000000000000000000000000000003100020106255000000000000000000000000000000000000123006003306038026400000140000000000000000000000000000000000000000000000000048100011101000002000000000000000000000000000030172044002100000070340000000000000000111700100000000
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................191433.004330000000000000001000000000001130000000000000000000000000002000000000000000000000001000030020002101680100001350001000000000020100000000100000000000000000000000000000000000001023051111111557371240000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................231377.003770000110000000000000000000000000000000000000000000000000004910000000000000000000001200400010004000501100001670001000000000010000001010110000000000000000000000000000000000004407004721201020000005000000000020000000000000000000000000000000000000000000000001000008000000000000000000000000000031130000100000000000000000000000000200000000000
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................221368.00368000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000002000000000000002000001306031000000000000000000000000000000000000230700140708019000000600000000000000000000000000000000000000000003300000030000160100000500000000000000001000000000004621324710810000007043000000000100100009600000000000
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................191341.00341000000000000000000000000000130960000000000000000000000000110000000000000000000001000000000030030000001000000010000000510001000648100100000000000001000000000000000000010190601660103200551000009000000000000000000000000000000000000000000000000001510005160200000800000000000000000000000000001416191500000000003021000000000000000002000000000000
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................201318.0031800000000000000000000000000020723000000000000000000000000100000000000000000000000000000000001000000000600000000000000100000000011100000000000000000000000000000000000010460152038201366400000010000000000000000000000000000000000000000000000000001000004000000000000000000000000000000000000198132400000100001000000000000000000006000000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACAT.............................................................................211314.00314000040000000000000000002000000000000000000000000000000004286106000000000000000000000900000000004001200000036000001000000000000000001000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001130000000000000000000000000000000200000000000
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................221309.0030900001000000000000000000000000000000000000000000000000000000000000000000000000000200000000002002000000100000000000000500000010518500000000000000001001000000000000000021240190071603024059000000170000000000000000000000001000000010000000000010000004000000000000011000000000000000400000000000121791400100000003012000000000000000001100000100000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................221261.002610000120000000000100000001000000000000000000000000000000000000000000000000000000001201020040002700610100014520001101000000301201020213000000000000000000000000000000000000055031066010021800000011000000000000000000000000000000000000001000000000000000000000000003000000000000000000000000000030030000000000100000000000000000000400000000000
............................................................................TGGGATTTTTTAGATCAGCAGTATC...................................................................................................................................251239.00239000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014396000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................231223.00223000080000000000001000000000000000000000000000000000000000000000000000000000000001300000010001300211110009500000000000001010001140200100000000000000000000000000000000000021031107011000200000060000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000001400000000001000000000000000000001200000000000
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................221218.0021800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000700000010101119000000000000010000000000000000000000252101300250502502300000070000000000000000000000000000000000000000000110010012100002000000011000000000000000000000000000663120012000100200000000000000000000700000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................221212.002120000110000000001000000000000000000000000000000000000000000000000000000000000000001500000000003900101100005000000000000000010000000503200000000000000000000000000000000000053011201011502150000004000000000000000000000000000000000000000000000000000000000201000002000000000000000000000000000021160000000000000000000000000000000800000000000
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................181197.001970000000000000000000000000000202600000000000000000000000010000000000000000000000000000000000100000000020000000000000030010000034500000000000000000000000000000000000002110200360222311140000070000000000000000000000000000000000000000000010000033000000000000000000000000000000000000000000141122360000000000101000000000000000000100000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................221179.0017900001100000000000001000000000000000000000000000000000000000000000000000000000100013000000200017002110000098000001000000000000000100000000000000000000000000000000000000000000000010400000000000000000000000000000000000000000000000000000000000000100000100000002000000000000000000000000000010000000000000000000000000000000000200000000000
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................231171.0017100001000000000000000000000000000000000000000000000000000213100000000000000000000000000000000000200000030000000000000131030004140620000000000000000000000000000000000008110150009040603400000000000000000000000000000000000000000001000000000000000000002010000000000000000000000000001100000720400200000000014000000010000000001000000000000
............................................................................TGGGATTTTTTAGATCAGCATC......................................................................................................................................221151.0015100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................221117.0011700002000000000000000000000000000000000000000000000000000000000000000000000000000300001000001000900000062000000000000000000000000000000000000000000000000000000000000000000131037130300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000600000000000
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................181104.001040000000000000010010000000000200000000000000000000000000010000000000000000000000010000000000200500000037000000000000000000001001011000100000000000000000000000000000000270000041827010000002000000000000000000000000000000000000000000000000000100000000000002000000000000000000000000000012090000000000000000000000000000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACC..............................................................................221103.0010300000000000000000000000000000000000000000000000000000000000000000000000000000000400000000008011900000053000010000000000000000100000000000000000000000000000000000000000200060004000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAAC...............................................................................20186.008600000000000000000010000000000100000000000000000000000000000000000000000000000000040000000000700800000051000000000000000000000000000000000000000000000000000000000000000000100100010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................25178.00780000000000000000000000000000000000000000000000000000000016000000000000000000000000000000000100100000000000000000000110000002010030000000000000000000000000000000000002105000101000200000000000000000000000000000000000000000000000000000000002000001000000030000000000000000000100000000240300210000001010000000000000000002800000000000
.........................................................................GGTTGGGATTTTTTAGATCAGATC.......................................................................................................................................24177.007700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTGCTATATAGCCA-T-ATTT...............................................................................................................21176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010050000001400000001000000100000000101100000000000000000000000000000000000091108001100205040000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24172.00720000000000000000000000000000100000000000000000000000000033000000000000000000000000000000000000000000020000000000000010010110020110000000000000000000000000000000000005302001106170140000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000012200010000000000100000000000000000600000000000
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................22169.00690000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000070000000000000000000000010120000000000000000000000000000000000005502001101060820000010000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000021060000000000000000000000000000000400000000000
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................21168.0068000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000029201000001501014000000000000000000000000000000000000150100000000010000003000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000001000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................21166.0066000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000080020000009000000000000000000000000011000000000000000000000000000000000000250000050207050000003000000000000000000000000000000000000000000000000000100001200000001000000000000000000000000000000020000000000000000000000000000000700000000000
...........................................................................TTGGGATTTTTTAGATCAGATC.......................................................................................................................................22264.5012900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................23164.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000100000000000000001806010913020500000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000010000000232200000000000000010000000000000001100000100000
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................24164.0064000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000001013000000000000000000000000000000000000530700100005080000000000000000000000000000000000000000000000000001000000200000200000001000000000000000000000000000026330001000000000100000000000000000500000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAC................................................................................21163.006300000000000000000000000000000000000000000000000000000000000000000000000000000000100000000005002900000012000000000000002010000002012000000000000000000000000000000000000000010000100010000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000020000000000000000000000000000000001000000000
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................22161.00610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000130000000000000000000000000000000000000000003401000202050200000000000000000000000000000000000000000000000000000000001000003000000020000000000000000000000000000203500000000002010000000000000000001700000000000
............................................................................TGGGATTTTTTAGATCAGCAGG......................................................................................................................................22158.00580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001302000001090130000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000063300011000000204400000000000000000200000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAACA..............................................................................21158.00580000200000000001000000000001000000000000000000000000000000000000000000000000000021000001000300400000038000000000000000000000000000000000000000000000000000000000000000000001021100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................21156.0056000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000007034000000000000000000000000000000000000460300110205040000000000000000000000000000000000000000000000000000000000100001200000001000000000000000000001000000010120000000000100000000000000000000300000000000
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................18156.00560000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000000010000000010320000000000000000000000000000000000003402000302018060000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010120000000000000000000000000000000000000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACA..............................................................................20154.00540000100000000000000000000000000000000000000000000000000026700000000000000000000000000000000200100000031000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAC.............................................................................23154.00540000000000000000000000010000000000000000000000000000000000000000000000000000000040000000000500800000021000040300000001000000000000000000000000000000000000000000000000100210010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................22152.00520000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000300000000000000000000000000000000000410000000000000000000000000000000000006403000100050110000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012220000000000100100000000000000000100000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCC.................................................................................20150.00500000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000300400000020000000000000111420012007004000000000000000000000000000000000000210100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................GGGATTTTTTAGATCAGCAG.......................................................................................................................................20149.00490000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000002902001405081100000002000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000011000000000000000000000000000000000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCCCAA................................................................................19147.004700000000000000000080000000000000000000000000000000000000000000000000000000000000000000000004001000000024000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................19147.0047000000000000000000000000000010011000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001003000000000000000000000000000000000000370100010012060000001000000000000000000000000000000000000000000010000000000000300000000000000000000000000000000000031020000000000000000000000000000000700000000000
......................................................................................................................................TGGCCTACTAAGTCCCAACATA............................................................................22147.00470000400000000000000000000000000000000000000000000000000015120000000000000000000002000000000030050000009000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000020010000000000000000000000000000000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................24146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300001000000000201000000000000000000000000000000000000000410200250102010000001000000000000000000000000000000000000000000010000000100000100000002000000000000000000000000000012170000000000001000000000000000000300000000000
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................20145.00450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000530000000000000000000000000000000000001102000102030200000020000000000000000000000000000000000000000000000000003000001000000000000000000000000000000000000123200000000000000000000000000000001000000000000
....................................................................................................................................ACTGGCCTACTAAGTCCC..................................................................................18144.004400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000020000000000000000000000000000000000000000000000000000000000000000070000100001030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................22141.0041000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001010000000000000000000000000000000000000430100010001040000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001073210000100000200000000000000000000600000000000
..........................................................................GTTGGGATTTTTTAGATCAGCATC......................................................................................................................................24140.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................23139.0039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000002002000000012000000000000000000000000000000000000010100030001020000000000000000000000000000000000000000000000000011000000100000000000001000000000000000000000000000034020000000000202000000000000000000300000100000
.........................................................................GGTTGGGATTTTTTAGAT.............................................................................................................................................18138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000001000000001100000000000000000000000000000000000000200100000002055000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000030330000000000000000000000000000000800000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTATC...................................................................................................................................26136.003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTATTGCTATATAGCCA-T-ATTT...............................................................................................................22134.00340000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100301000013000000000000000000000000030000000000000000000000000000000000000310100030300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................25134.00340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000002000000000000000000000000000000000000000003200000001000500000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000130000000000001000000000000000000001100000000000
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................22130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000310000110003090000001000000000000000000000000000000000000000000020000000100000200000000000000000000000000000000000000010000000000000000000000000000000300000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCT.................................................................................20130.0030000010000000000000000000000000000000000000000000000000000000000000000000000000003000000000040020000008000000000000001000000000001000000000000000000000000000000000000300200000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000100000000000
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................19129.00290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001170000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012010000000000000000000000000000000300000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACC..............................................................................23129.00290000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000024000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000000001000000002000000000000000000000000000000000000000220300010000030000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021120000000000001000000000000000000000000000000
.................................................................................................TTATTGCTATATAGCCA-T-ATT................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000000000000000000000040200050204000000002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000100000000000
............................................................................TGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................23124.0024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000300300110110080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000100000000000
............................................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................................................21123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000530200000002000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000100000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................20123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000301000000000000000000000000000000000000100000010102031000001000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000010020000000000000000000000000000000200000000000
.........................................................................GGTTGGGATTTTTTAGATCAT..........................................................................................................................................21123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081000000000000000000000000000000000000000100010100000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000021100000000000000000000000000000000200000000000
droEre2
CTC-----TAA---------------AGAAGTCGGGT----T-TTAATCGGAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TT-----GA-----A----TATTAAAAAAAAAAATAGTAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2013907.0039072040301534870
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2213613.00361341083107826630
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................2211044.001044601710358320
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................221960.009602048029080
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211844.00844302410135870
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211844.00844130193096290
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231382.0038210480103230
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231274.002741030042390
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................201201.0020110016001750
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................221181.0018151324011020
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241149.001491015021310
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................211122.001221802000840
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................211108.00108001302930
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23187.0087001101750
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19177.007700701690
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19176.0076001901560
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................21163.006300900540
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20133.003310801230
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22133.0033001300200
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22131.0031130001170
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22131.003100401260
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................23123.002330100190
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................18122.002200100210
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................23120.002000200180
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................22116.001600201130
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................24115.001500000150
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24114.001400301100
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................19114.001420100110
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................22114.001400300110
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................23113.00136010060
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................20112.001200000120
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................20112.00120030090
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................21110.00100020080
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2119.0098000010
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2219.0090000090
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2318.0080000080
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2318.0080010070
.........................................................................GGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2317.0070000070
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................1817.0071000060
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2016.0060010050
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2415.0050010040
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................2015.0050000050
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2215.0050010040
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................2214.0042000020
........................................................................TGGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2314.0040010030
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2514.0040010030
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................2114.0040010030
.........................................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................................................2314.0040010030
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................1914.0040000040
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................2114.0040010030
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2313.0030000030
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2213.0030000030
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................2213.0030010020
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................2112.0020000020
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2212.0020000020
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................1812.0020000020
...........................................................................TTGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2412.0020000020
..........................................................................GTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2312.0020000020
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................1912.0020000020
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2512.0020000020
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2312.0020000020
..................................................................................................TATTGCTACATAGCCA-T-ATTT...............................................................................................................2112.0020000020
...........................................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................................................2312.0020000020
.........................................................................GGTTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2411.0010000010
............................................................................TGGGATTTTTTAGATCAGCAAA......................................................................................................................................2211.0010000010
....................................................................................................................................ACTGGCCTACTAAGTCCCAAT...............................................................................2111.0010000010
...........................................................................TTGGGATTTTTTAGATCAGCACA......................................................................................................................................2311.0010000010
..................................................................................................TATTGCTACATAGCCA-T-AT.................................................................................................................1911.0010000010
..................................................................................................................................CTACTGGCCTACTAAGTCCCA.................................................................................2111.0010010000
..............................................................................GGATTTTTTAGATCAGCAG.......................................................................................................................................1911.0010000010
droYak3
CTC-----TAA---------------AGAAGTCGGGT----T-TTGATCGGAATCCGTGAGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TT-CGACG-------TTGATGTGA-----A----GATTACAA-------A-----SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2022212.004424366420021454220000
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2221449.5028992800008091794160000
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2221230.50246122760106312100000
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................222556.001112020032577780000
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................212358.5071718920013439200000
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................212294.00588130019438730000
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................212266.505333150006914540000
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................232183.003661410006615810000
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................232104.50209413004811520000
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................24269.0013813000358910000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................22264.5012962720243400000
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................21244.50896000305210000
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................21239.50792600244700000
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19228.50571400083500000
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23228.005611000133200000
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................20226.50537400172500000
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................21225.0050430001600000
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22224.00483000103500000
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20216.50330000112200000
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24214.00281100061100000
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23213.5027000052200000
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2229.501930007900000
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................1829.001850004900000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................2329.0018310041000000
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2329.0018140002200000
...........................................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................................................2328.5017170000000000
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................1927.5015150000000000
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................1927.0014000041000000
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2227.001450000900000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2527.001410006700000
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2326.501321003700000
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................2226.501300005710000
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................2026.001210005510000
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2226.001250002500000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................2225.501124003200000
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2125.001070001200000
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................2024.50900003510000
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................2224.50900002700000
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................2024.50990000000000
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................2123.50700003400000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................2323.50731002100000
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................2123.00630000300000
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................1922.50511003000000
.........................................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................................................2322.00430000100000
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2222.00430000100000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2322.00400003100000
............................................................................TGGGATTTTTTAGATCAGCAGG......................................................................................................................................2222.00400002200000
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2021.50310000200000
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2121.50300001200000
.........................................................................GGTTGGGATTTTTTAGATCAGG.........................................................................................................................................2221.50330000000000
............................................................................TGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2321.50300000300000
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2421.50300000300000
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2021.50330000000000
............................................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................................................2121.50300000300000
.............................................................................GGGATTTTTTAGATCAGC.........................................................................................................................................1821.50330000000000
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2221.50310000200000
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2521.00210001000000
........................................................................TGGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2321.00220000000000
..................................................................................................TATTGCTATATAGCCA-T-ATTT...............................................................................................................2121.00201001000000
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2321.00220000000000
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................1821.00200000200000
...........................................................................TTGGGATTTTTTAGATCAGCCT.......................................................................................................................................2221.00200001100000
...........................................................................TTGGGATTTTTTAGATCAC..........................................................................................................................................1921.00210000100000
..........................................................................GTTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2321.00220000000000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2221.00200001100000
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................2121.00210000100000
...................................................................................................................................TACTGGCCTACTAAGTCCCG.................................................................................2021.00220000000000
..........................................................................GTTGGGATTTTTTAGATCAGCT........................................................................................................................................2221.00210000100000
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2421.00200000200000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................2221.00200001100000
.................................................................................TTTTTTAGATCAGCAGT......................................................................................................................................1721.00200000200000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................2221.00220000000000
.........................................................................GGTTGGGATTTTTTAGATCAT..........................................................................................................................................2121.00200000200000
.........................................................................GGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2321.00200000200000
droEug1
CCT-----TAAA--------------AGAAGTCGGGA----C-TTATTCGAAATCCGCGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATA-------ATGGTGTTA-----A----ACTTATAA-------ATC--TSizeHit CountTotal NormTotal
No Reads
droBia1
CCA-----CAAA--------------AGGAGTCGGCG----T-TTGATCGAGATACGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATGTAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAAAATC-CGACG-------TTGGCGTGA-----A----CAGTAAAA-------A-----SizeHit CountTotal NormTotal
No Reads
droTak1
CTT-----AAC---------------AGGTGTCAGGG----C-TTAATC-------GTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTGTATAGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAAAGTT-CA----------TTAATGCAA-----T----AAT--AAA-------AAG--TSizeHit CountTotal NormTotal
No Reads
droEle1
CTT-----TAAA--------------TAAAGTCGGTT----TCTTGTTAGAAATAC--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATTTCGCCA-T-ATTTATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATA-------ATAAAGTGC-----A----CCTGGTGA-------ACT--TSizeHit CountTotal NormTotal
No Reads
droRho1
TTT-----AAA---------------AGAAGTCGGTT----TCTTGATCGAAATCC--GTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACTTCGCCA-T-ATTTATAAATTTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACAGG-TTACGATG-------ATGAAGTGC-----A----GTTAGTGA-------ATA--TSizeHit CountTotal NormTotal
No Reads
droFic1
TTT-----TAA---------------AGAAATCAGTG----C-CAGATCGAAATCCGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTAT--AGCCA-T-ATTTATTATTAATCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCGCAGG-CCATGTCA-------GTAGAATGT-----------CTTAAAA-------GTG--TSizeHit CountTotal NormTotal
No Reads
droKik1
CTT-----AAAT--------------ATAAGCTGG-----------------TTCTGTGTGTGCCCTCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACATTGCCA-T-ATTTTTAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-TTGCAATA-------ATGGTGTGC-----C----AATTGTAA-------ATG--CSizeHit CountTotal NormTotal
No Reads
droAna3
GAA-----CAA---------------TGAAGT----T----C-CGAATCGAAATCTGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCA-T-ATTCATAAATTCTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTAT----T------------------GA-----AAATAAAATACAA-------ATT--TSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2211950.00195020063111874
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2011933.001933000265221646
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2211347.001347141064056636
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221738.0073841020549479
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211736.00736160033216372
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................211474.00474200435424
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231306.00306200455254
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211295.002952001727114
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................211285.00285400518222
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................221269.0026911420205128
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241229.00229000334192
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................201213.002133700130163
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................201156.00156000165135
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231136.00136210501073
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................211128.00128220016288
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................191115.0011500017098
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................201106.0010610015486
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22165.006537007021
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19152.005210023127
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................22147.004710013033
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22141.004100017024
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20141.004120015123
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................23140.00400007132
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23126.00260007019
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................22126.00260001223
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22125.00250008215
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................19124.00240001023
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................24123.00230000023
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................19121.00210002019
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................22119.00190000019
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23118.00180007011
..........................................................................GTTGGGATTTTTTAGATC............................................................................................................................................18116.00160000016
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................23115.0015300615
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................21114.00141200200
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................23113.0013600007
..........................................................................GTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................23112.00120001011
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................21111.0011000308
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................22110.0010000118
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................2019.009500103
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................1819.009000702
.........................................................................GGTTGGGATTTTTTAGAT.............................................................................................................................................1818.008000008
..........................................................................GTTGGGATTTTTTAGATCAGA.........................................................................................................................................2118.008000107
.............................................................................GGGATTTTTTAGATCAGCAG.......................................................................................................................................2017.007600100
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................1917.007200005
.........................................................................GGTTGGGATTTTTTAGATCAT..........................................................................................................................................2117.007000115
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2016.006000204
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2316.006000105
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2016.006000105
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2416.006000303
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................2115.005000401
.........................................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................................................2315.005000302
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................2215.005200003
......................................................................................................................................TGGCCTACTAAGTCCCAACAT.............................................................................2114.004200101
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................2214.004300100
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................2114.004000202
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2513.003000102
.........................................................................GGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2413.003000012
.........................................................................GGTTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2413.003000003
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................2213.003000102
............................................................................TGGGATTTTTTAGATCAGCAA.......................................................................................................................................2113.003000102
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2213.003000201
.........................................................................GGTTGGGATTTTTTAGATCAA..........................................................................................................................................2113.003000003
............................................................................TGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2312.002000200
...........................................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................................................2312.002000200
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................2212.002200000
......................................................................................................................................TGGCCTACTAAGTCCCAACA..............................................................................2012.002200000
...................................................................................................................................TACTGGCCTACTAAGTCCCT.................................................................................2012.002000002
............................................................................TGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2412.002000101
.............................................................................GGGATTTTTTAGATCAGC.........................................................................................................................................1812.002000101
...........................................................................TTGGGATTTTTTAGATCAGCTA.......................................................................................................................................2212.002000101
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................2012.002000101
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................2112.002000101
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2312.002100001
............................................................................TGGGATTTTTTAGATCAGCAGTC.....................................................................................................................................2312.002000110
..........................................................................GTTGGGATTTTTTAGATCT...........................................................................................................................................1912.002000002
..................................................................................................TATTGCTATATTGCCA-T-ATTC...............................................................................................................2112.002100001
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2212.002000002
............................................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................................................2112.002000101
.....................................................................................................................................CTGGCCTACTAAGTCCCAACA..............................................................................2112.002200000
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2512.002000101
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................1912.002100001
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................1812.002000011
...........................................................................TTGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2412.002000002
..........................................................................GTTGGGATTTTTTAGATCAT..........................................................................................................................................2012.002000002
.................................................................................................TTATTGCTATATTGCCA-T-ATT................................................................................................................2112.002000002
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2112.002000200
.........................................................................GGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2512.002000002
.........................................................................GGTTGGGATTTTTTAGATCT...........................................................................................................................................2012.002000002
............................................................................TGGGATTTTTTAGATCAGCAGTTC....................................................................................................................................2411.001000001
....................................................................................................................................ACTGGCCTACTAAGTCCCAACATT............................................................................2411.001000001
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2311.001000001
droBip1
ATCTTGAACAA---------------TGAAGT----A----T-CGAATCCAAATCTGTGTGTGCCCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTATATTGCCA-T-ATTCATATATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTAG-TTATGAT---------------------------AATTATTG-------AAA--TSizeHit CountTotal NormTotal
No Reads
dp5
CTG-----CAGACGCGAGGGTCAACCATAAGACGTGTAAAAC-TCAATTGGAATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCG-T-ATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-CT-TAACA-------ATAA---------------GAC----T-------ATG--TSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................................AGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2211375.00137512220572075412012
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2011320.00132031602140107413000
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2211111.00111103915619995208
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................2211054.001054041129570440000
.........................................................................AGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231523.0052301203404770000
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211486.0048611203804341000
.........................................................................AGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241466.00466030604543000
.........................................................................AGTTGGGATTTTTTAGATCAG..........................................................................................................................................211397.00397090403813000
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................211354.0035407059027530100
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221259.002590713502133000
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211164.00164050601520001
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231134.001340102601070000
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................20185.00850210360280000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22178.007803073020000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................23172.007205259060000
.........................................................................AGTTGGGATTTTTTAGATCA...........................................................................................................................................20172.007213020651000
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................21170.007006063010000
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................21166.00660230200230000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................23158.005804052020000
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19143.004304000381000
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................19136.003602031030000
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23132.003201070231000
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19130.003001050240000
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24130.0030010100190000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACC..............................................................................23127.002701026000000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACC..............................................................................22126.002600025010000
..................................................................................................................................CTACTGGCCTACTAAGTCCCAAC...............................................................................23125.002501024000000
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................20120.002001000180010
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23117.001700000170000
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20116.001600000140020
.........................................................................AGTTGGGATTTTTTAGATCAGCT........................................................................................................................................23114.001400040100000
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22113.001300000130000
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................18113.001300000130000
.........................................................................AGTTGGGATTTTTTAGATC............................................................................................................................................19112.00121304040000
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................22112.001200012000000
.........................................................................AGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2519.0090001080000
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................2219.0090108000000
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................2118.0080004040000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAC.............................................................................2318.0080008000000
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................1817.0070007000000
..................................................................................................TATTGCTATACAGCCG-T-ATTAAT.............................................................................................................2317.0070000070000
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2316.0060006000000
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2216.0060004020000
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................1915.0050000050000
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................2215.0050000050000
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................2215.0050005000000
.........................................................................AGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2415.0050000050000
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2514.0040000040000
.........................................................................AGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2414.0040001030000
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2314.0040011020000
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2214.0040000040000
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2014.0040000040000
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................2114.0040003010000
.....................................................................................................................................CTGGCCTACTAAGTCCCAACA..............................................................................2113.0030102000000
............................................................................TGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2413.0030100020000
.........................................................................AGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2213.0030000030000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2213.0030002010000
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................2013.0030200010000
.........................................................................AGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2513.0030001020000
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2213.0030100020000
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2012.0020001010000
.........................................................................AGTTGGGATTTTTTAGATCAT..........................................................................................................................................2112.0020000020000
...........................................................................TTGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2412.0020000020000
.....................................................................................................................................CTGGCCTACTAAGTCCCAAC...............................................................................2012.0020002000000
......................................................................................................................................TGGCCTACTAAGTCCCAAC...............................................................................1912.0020101000000
......................................................................................................................................TGGCCTACTAAGTCCCAACAT.............................................................................2112.0020002000000
..........................................................................GTTGGGATTTTTTAGATCAGCC........................................................................................................................................2212.0020001010000
.........................................................................AGTTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2612.0020000020000
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2212.0020001010000
.........................................................................AGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2212.0020001010000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................2212.0020001010000
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................1912.0020001010000
.................................................................................................TTATTGCTATACAGCCG-T-ATT................................................................................................................2112.0020000020000
.................................................................................................................................TCTACTGGCCTACTAAGTCCCAAC...............................................................................2412.0020002000000
............................................................................TGGGATTTTTTAGATCAGCAGG......................................................................................................................................2212.0020000020000
..........................................................................GTTGGGATTTTTTAGATCAGA.........................................................................................................................................2112.0020000020000
.............................................................................GGGATTTTTTAGATCAGC.........................................................................................................................................1811.0010100000000
..................................................................................................TATTGCTATACAGCCG-T-ATT................................................................................................................2011.0010000010000
.........................................................................AGTTGGGATTTTTTAGATCAGG.........................................................................................................................................2211.0010000010000
............................................................................................................................AATCTTCTACTGGCCTACTAAGTCCCAAC...............................................................................2911.0010001000000
............................................................................TGGGATTTTTTAGATCAGCT........................................................................................................................................2011.0010000010000
.......................................................................................................................................GGCCTACTAAGTCCCAAC...............................................................................1811.0010001000000
droPer2
CTG-----CAAACGCGAGGGTCAACTATAAGACGTGTAAAAC-TCAATTGGAATATTTGTGTGCACCCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGCTATACAGCCG-T-ATTAATAAATCTTCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTGG-CT-TAACA-------ATAAGACTATGTTAA----AATGAGTG-------AAG--TSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2212903.00290303201329151527
.........................................................................AGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2211640.001640511074586613
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2011546.00154681205729477
.........................................................................AGTTGGGATTTTTTAGATCAGCA........................................................................................................................................2311386.00138601406377323
.........................................................................AGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2411321.00132108076154012
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................2211016.00101605042456918
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211902.0090201003285622
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211726.0072601102894224
.........................................................................AGTTGGGATTTTTTAGATCAG..........................................................................................................................................211677.0067700024342311
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................211586.0058607028728111
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231321.003210101471703
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................221190.00190024081850
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................211140.00140014049770
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................201113.00113010039640
.........................................................................AGTTGGGATTTTTTAGATCA...........................................................................................................................................201101.0010101026722
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23175.007500030432
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19155.005504017340
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20149.004904019260
.........................................................................AGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................25143.004300023200
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22140.004000016240
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24139.003900014250
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23138.003800016220
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................20136.003600019161
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................23135.003501014200
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19130.003001015140
.........................................................................AGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................24130.003000012180
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22127.00270207180
.........................................................................AGTTGGGATTTTTTAGATCAGCT........................................................................................................................................23124.00240004200
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................18119.00190004150
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22118.00180002160
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................22117.00170007100
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................19116.00160006100
..................................................................................................TATTGCTATACAGCCG-T-ATTAAT.............................................................................................................23115.0015000780
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................23113.0013000760
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................22113.0013000490
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................22111.0011000380
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................21111.00110000101
.........................................................................AGTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................25111.0011000470
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................19111.0011000470
....................................................................................................................................ACTGGCCTACTAAGTCCCAA................................................................................20110.0010000460
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2317.007010330
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2117.007000340
.........................................................................AGTTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2417.007000340
.........................................................................AGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2417.007000340
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................2317.007010330
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2117.007010240
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2216.006000222
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2016.006000060
.................................................................................................TTATTGCTATACAGCCG-T-ATT................................................................................................................2115.005000050
.........................................................................AGTTGGGATTTTTTAGATC............................................................................................................................................1915.005110210
..................................................................................................TATTGCTATACAGCCG-T-ATT................................................................................................................2014.004000130
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2314.004010030
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................2214.004000040
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................2014.004000130
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................2114.004000220
.........................................................................AGTTGGGATTTTTTAGAT.............................................................................................................................................1814.004000220
.........................................................................AGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2313.003000030
.........................................................................AGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2213.003000300
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2213.003000030
...........................................................................TTGGGATTTTTTAGATCAGCCT.......................................................................................................................................2213.003000030
.........................................................................AGTTGGGATTTTTTAGATCAT..........................................................................................................................................2113.003000030
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................1813.003000030
.................................................................................................TTATTGCTATACAGCCG-T-ATTAAT.............................................................................................................2413.003000210
.........................................................................AGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2213.003010020
.........................................................................AGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2313.003000030
..........................................................................GTTGGGATTTTTTAGATCAGA.........................................................................................................................................2113.003000210
..................................................................................................TATTGCTATACAGCCG-T-ATTA...............................................................................................................2113.003000030
............................................................................TGGGATTTTTTAGATCAGCAC.......................................................................................................................................2113.003000030
...........................................................................TTGGGATTTTTTAGATCAGCACC......................................................................................................................................2313.003000120
............................................................................TGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2412.002000020
.........................................................................AGTTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2612.002000110
............................................................................TGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2312.002010100
...........................................................................TTGGGATTTTTTAGATCAGCAGTTT....................................................................................................................................2512.002000200
.........................................................................AGTTGGGATTTTTTAGATCAGCAAA......................................................................................................................................2512.002000110
droWil2
C--------------------------------------------------AATCTGTGTGTGCGCCCATTATGGTTGGGATTTTTTAGATCAGCAGTTATTGCTACAA-GTCAAAAATTTAT-TATCATCTACTGGCCTACTAAGTCCCAACATAATGAGAGTAAAAACCACTG-------ACGAAATGAATTTATGTGA-----A----AA------------------TSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................20118331.0018331147100743610
.........................................................................GGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2215563.00556331310122429
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2212263.00226355111811692
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211819.00819545021271
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221707.007070281696
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231433.00433180021250
...................................................................................................................................TACTGGCCTACTAAGTCCCAAC...............................................................................221310.00310881000212
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................201288.0028816700265
.........................................................................GGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231283.0028359100223
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................211252.002522111247
.........................................................................GGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241193.001938300182
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................211153.001531440009
...................................................................................................................................TACTGGCCTACTAAGTCCCAA................................................................................211129.001295400120
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................191116.001165501060
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23189.00893700151
.........................................................................GGTTGGGATTTTTTAGATCAG..........................................................................................................................................21187.00871300074
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22169.00694500024
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22167.00672901037
...................................................................................................................................TACTGGCCTACTAAGTCCC..................................................................................19161.00614600015
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19149.0049500044
.........................................................................GGTTGGGATTTTTTAGATC............................................................................................................................................19148.00482000028
.........................................................................GGTTGGGATTTTTTAGATCA...........................................................................................................................................20146.0046300043
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................18141.00412300018
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................22140.00403000010
...................................................................................................................................TACTGGCCTACTAAGTCCCAACT..............................................................................23134.00341610017
...........................................................................TTGGGATTTTTTAGATCAGCC........................................................................................................................................21132.0032240008
...........................................................................TTGGGATTTTTTAGATCAGA.........................................................................................................................................20122.0022700015
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................20122.00221000012
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................21120.0020140006
.........................................................................GGTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................24119.0019100018
....................................................................................................................................ACTGGCCTACTAAGTCCCAACA..............................................................................22119.0019130015
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................22118.0018000117
...........................................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................................................23118.0018120006
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................23118.0018170001
....................................................................................................................................ACTGGCCTACTAAGTCCCAACAT.............................................................................23115.001525008
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20115.0015000015
.........................................................................GGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................25112.0012000012
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24112.0012120000
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................22111.001120009
.........................................................................GGTTGGGATTTTTTAGATCAGA.........................................................................................................................................22111.001120009
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................2028.0016160000
...........................................................................TTGGGATTTTTTAGATCAGCATA......................................................................................................................................2318.00860002
.........................................................................GGTTGGGATTTTTTAGATCAGT.........................................................................................................................................2218.00830005
....................................................................................................................................ACTGGCCTACTAAGTCCCAAC...............................................................................2117.00723002
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2116.00660000
...........................................................................TTGGGATTTTTTAGATCT...........................................................................................................................................1816.00620004
...................................................................................................................................TACTGGCCTACTAAGTCCCAACA..............................................................................2316.00600006
...................................................................................................................................TACTGGCCTACTAAGTCCCAACC..............................................................................2316.00631002
....................................................................................................................................ACTGGCCTACTAAGTCCCAACT..............................................................................2216.00620004
......................................................................................................................................TGGCCTACTAAGTCCCAACATT............................................................................2215.00511003
....................................................................................................................................ACTGGCCTACTAAGTCCC..................................................................................1815.00550000
.........................................................................GGTTGGGATTTTTTAGATCAGCT........................................................................................................................................2315.00520003
.........................................................................GGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2315.00520003
...................................................................................................................................TACTGGCCTACTAAGTCCCAAA...............................................................................2215.00500005
............................................................................TGGGATTTTTTAGATCAGCAGG......................................................................................................................................2214.00400004
...........................................................................TTGGGATTTTTTAGATCAGCACC......................................................................................................................................2313.00320001
...................................................................................................................................TACTGGCCTACTAAGTCC...................................................................................1813.00320001
.........................................................................GGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2313.00330000
...........................................................................TTGGGATTTTTTAGATCAGCTC.......................................................................................................................................2213.00330000
.........................................................................GGTTGGGATTTTTTAGATCT...........................................................................................................................................2013.00300003
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2313.00300003
.............................................................................GGGATTTTTTAGATCAGC.........................................................................................................................................1813.00330000
.............................................................................GGGATTTTTTAGATCAGCAGT......................................................................................................................................2112.00200002
...................................................................................................................................TACTGGCCTACTAAGTCCCAT................................................................................2112.00201001
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2212.00200002
...........................................................................TTGGGATTTTTTAGATCAGCCT.......................................................................................................................................2212.00220000
.........................................................................GGTTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2412.00210001
...........................................................................TTGGGATTTTTTAGATCAGCAGTTC....................................................................................................................................2512.00210001
...........................................................................TTGGGATTTTTTAGATCAGCATC......................................................................................................................................2312.00220000
............................................................................TGGGATTTTTTAGATCAGCAA.......................................................................................................................................2112.00200002
...........................................................................TTGGGATTTTTTAGATCAGCAGTA.....................................................................................................................................2412.00220000
.........................................................................GGTTGGGATTTTTTAGATCAA..........................................................................................................................................2112.00210001
..................................................................................................TATTGCTACAA-GTCAAAAATTTAT-TAT.........................................................................................................2712.00200002
....................................................................................................................................ACTGGCCTACTAAGTCCCAACATT............................................................................2412.00200002
...........................................................................TTGGGATTTTTTAGATCAGCAGTCC....................................................................................................................................2512.00210001
.........................................................................GGTTGGGATTTTTTAGATCC...........................................................................................................................................2012.00200002
.........................................................................GGTTGGGATTTTTTAGATCAGG.........................................................................................................................................2212.00220000
.............................................................................GGGATTTTTTAGATCAGCAG.......................................................................................................................................2012.00200002
..................................................................................................TATTGCTACAA-GTCAAAAATTTAT-T...........................................................................................................2512.00200002
...............................................................................GATTTTTTAGATCAGCAG.......................................................................................................................................1812.00210001
............................................................................TGGGATTTTTTAGATCAG..........................................................................................................................................1812.00200002
.........................................................................GGTTGGGATTTTTTAGATCACA.........................................................................................................................................2211.00100001
.........................................................................GGTTGGGATTTTTTAGATCAC..........................................................................................................................................2111.00100001
...........................................................................TTGGGATTTTTTAGATCAGCCC.......................................................................................................................................2211.00100001
....................................................................................................................................ACTGGCCTACTAAGTCCCA.................................................................................1911.00100001
............................................................................TGGGATTTTTTAGATCAGCAGTCC....................................................................................................................................2411.00100001
...........................................................................TTGGGATTTTTTAGATCAGCAGTCT....................................................................................................................................2511.00110000
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2311.00100001
...................................................................................................................................TACTGGCCTACTAAGTCCCAAG...............................................................................2211.00100001
droVir3
--------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATATATATATG-T-A-TCGTAAATCTTCTACTGGCCTACTAAGTCTCAATATAATGGGAGTAAAAACCTCAG---------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.........................................................................AGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2219659.0096592873721000010020000248146718139920138236000002212000000020000000000000002088001099500000066111400000
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................2112013.002013813625012000100003325143722037590001111000000000000000000000000000600399300000001030000000
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................2011689.001689151148200000000000138232412029140000000000000000000000000000000000100417100000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2211545.00154506570020000000020012912281606511242920001012050010001000000000000000000100442400200000000000000
.........................................................................AGTTGGGATTTTTTAGATCAG..........................................................................................................................................2111382.00138203130000000000086673592501481130000130000000000100000000000000000000871500200000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAAT...............................................................................2211333.00133303673900000000000203109122786720168170000102202000000000000000000000000030067100010000001000000
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................2111102.00110200501220000000238154311122540792030000012020000001000000000000000000000219200001000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTC..................................................................................191616.00616659430000000000021100001200000000000000000000000000000000000006000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTC..................................................................................181544.00544153610000000000003000101000000000000000000000000000000000000001000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................231505.0050501200010000100076460544271251030000000010100011000000000000000000000158100100000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231446.004460632000000000004429152618031600000000010000000000000000000000000200164000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221431.00431003001000000005024354425034500000001000000001000000000000000000300184300000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................221407.004070253000000000005039124216046570000010010000000000000000000000000000124000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCA...........................................................................................................................................201406.004060109100000000000660012607130000000000000000000000000000000000000245100000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211365.003650311000000000003631163925137440000012010000000000000000000000000000107100100000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAA................................................................................211327.003270331000000000000493821332606048000000100000000000000000000000000010025000000000000000000
.........................................................................AGTTGGGATTTTTTAGATC............................................................................................................................................191312.003120292200000000000010000000000000000000000000000000000000000010016000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCA.................................................................................201310.003102332300000000000322623252305252000000000000000000000000000000000030034000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241296.00296071000000000005018201212011370000000000000000000000000000000000000146000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................201166.001660300000000000013015300120001012000000000000000000000000000000133100000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................231143.0014323110000000000097011440613000000000000000000000000000000000000053200000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAAT...............................................................................211107.00107122110000000000011722860161400000000000000000000000000000000000007000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCT........................................................................................................................................231102.00102052000000000000141120005000000000000000000000000000000000000036000000000000000000
............................................................................TGGGATTTTTTAGATCAGCA........................................................................................................................................20191.0091001000000000001713019501218000000000000000000000000000000000000015000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAATA..............................................................................22189.008906700000000000136141280171400000000000000000000000000000000000001000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAATT..............................................................................22153.0053082000000000007211520111100000000100000000000000000000000000000000200000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAATAT.............................................................................23148.0048121000000000007101034011800000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAATT..............................................................................23144.004401910000000000030221204800000000000000000000000000000000001001000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCA.................................................................................19135.00350770000000000032103202100000000000000000000000000000000003004000000000000000000
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19130.003008100000000000100001014000000000000000000000000000000000000014000000000000000000
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................19126.002603100000000000000011001000000000000000000000000000000000000019000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAA................................................................................20125.00250220000000000033005303400000000000000000000000000000000000000000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGT.........................................................................................................................................22125.0025010000000000000110010000000000000000000000000000000000000000012000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................22121.00210200000000000010112201300000000000000000000000000000000000008000000000000000000
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................19120.00200010000000000010002303000000000000000000000000000000000001009000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................21120.002001800000000000000000100000000000000000000000000000000000000001000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAAC...............................................................................22118.001801610000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGG.........................................................................................................................................22116.001601600000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTGGGATTTTTTAGATC............................................................................................................................................18115.001501500000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TGGCCTACTAAGTCTCAATATT............................................................................22114.00140620000000000001001000200000000000000000000000000000000000002000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................23114.00140000000000000011001002400000000000000000000000000000000000005000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................23113.00130100000000000021001001000000000000000000000000000000000000007000000000000000000
.........................................................................AGTTGGGATTTTTTAGAT.............................................................................................................................................18113.00130700000000000001000000000000000000000000000000000000000000005000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAA.......................................................................................................................................23112.00120100000000000001001200101000010000000000000000000000000000004000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................24112.00120300000000000011010101100000000000000000000000000000000000003000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................24111.00110300000000000040000001200000000000000000000000000000000000001000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................22110.00100010000000000011002101100000000000000000000000000000000000002000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGA.........................................................................................................................................22110.00100300000000000000000100000000000000000000000000000000000000006000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAT..........................................................................................................................................2119.0090000000000000000000100200000000000000000000000000000000000006000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCT........................................................................................................................................2219.0090600000000000000001000000000000000000000000000000000000000000002000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2419.0090000000000000020000200000000000000000000000000000000000000005000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2218.0080200000000000000000001000000000000000000000000000000000000005000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCAGT......................................................................................................................................2517.0070100000000000000000201000000000000000000000000000000000000003000000000000000000
.........................................................................AGTTGGGATTTTTTAGATT............................................................................................................................................1917.0070100000000000000000000000000000000000000000000000000000000006000000000000000000
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................1816.0060200000000000020001000100000000000000000000000000000000000000000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCG........................................................................................................................................2316.0060600000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAAA...............................................................................2216.0060210000000000010000101000000000000000000000000000000000000000000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAT.......................................................................................................................................2115.0050000000000000010000001100000000000000000000000000000000000002000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGG.........................................................................................................................................2115.0050500000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCT.................................................................................2015.0050400000000000000000100000000000000000000000000000000000000000000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2315.0050000000000000001001000000000000000000000000000000000000000003000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGC......................................................................................................................................2215.0050000000000000011000000000000000000000000000000000000000000003000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2414.0040000000000000000000101100000000000000000000000000000000000001000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCT...................................................................................1814.0040200000000000001000001000000000000000000000000000000000000000000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAC..........................................................................................................................................2114.0040000000000000000000000100000000000000000000000000000000000003000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2314.0040200000000000000000000000000000000000000000000000000000000002000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAGA......................................................................................................................................2214.0040000000000000010001000000000000000000000000000000000000000002000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCG...........................................................................................................................................2013.0030200000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2413.0030000000000000000000001000000000000000000000000000000000000002000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGT.........................................................................................................................................2013.0030100000000000000000000000000000000000000000000000000000000002000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2213.0030300000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGG......................................................................................................................................2313.0030300000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGT.........................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000003000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGG.........................................................................................................................................2013.0030300000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGTTGGGATTTTTTAGATCT...........................................................................................................................................2013.0030200000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCG........................................................................................................................................2113.0030200000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................GATTTTTTAGATCAGCAG.......................................................................................................................................1812.0020000000000000000000001100000000000000000000000000000000000000000000000000000000
..................................................................................................................................CTACTGGCCTACTAAGTCTCAAT...............................................................................2312.0020000000000000011000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ACTGGCCTACTAAGTCTCAATATT............................................................................2412.0020100000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................................TGGGATTTTTTAGATCAGCAA.......................................................................................................................................2112.0020000000000000010000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAATAA.............................................................................2412.0020000000000000010000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAAG...............................................................................2212.0020100000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCAT................................................................................2112.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCTCAAT...............................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTGGGATTTTTTAGATCAGCC........................................................................................................................................2212.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................CTGGCCTACTAAGTCTCAA................................................................................1912.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2312.0020000000000000010000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................TACTGGCCTACTAAGTCTCC.................................................................................2012.0020100000000000000000001000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAATA-----T-TATCATAAGTTCTCTACTGGCCTACTAAGTCTCAATATAATGGGAGTAAACACCTCAG---------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................AGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2212092.0020921107691282228
.........................................................................AGTTGGGATTTTTTAGATCAG..........................................................................................................................................2111484.00148420597867018
...........................................................................TTGGGATTTTTTAGATCAGCAG.......................................................................................................................................221561.005616120933609
.........................................................................AGTTGGGATTTTTTAGATCA...........................................................................................................................................201401.004013015324203
...........................................................................TTGGGATTTTTTAGATCAGC.........................................................................................................................................201373.003731014123001
.........................................................................AGTTGGGATTTTTTAGATCAGCA........................................................................................................................................231178.00178104612902
.........................................................................AGTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................241152.0015210678211
.........................................................................AGTTGGGATTTTTTAGATCAGCT........................................................................................................................................231147.0014700569001
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................221140.0014000498605
...........................................................................TTGGGATTTTTTAGATCAGCA........................................................................................................................................211110.0011000367301
...................................................................................................................................TACTGGCCTACTAAGTCTCAAT...............................................................................22178.0078120283800
...........................................................................TTGGGATTTTTTAGATCAGCAGT......................................................................................................................................23167.006700273703
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................21162.006200253601
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................23147.004700242201
..........................................................................GTTGGGATTTTTTAGATCAGC.........................................................................................................................................21143.004320172301
...................................................................................................................................TACTGGCCTACTAAGTCTCA.................................................................................20136.003610191600
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................22129.002900111800
.........................................................................AGTTGGGATTTTTTAGATCAGT.........................................................................................................................................22126.002600101600
.........................................................................AGTTGGGATTTTTTAGATC............................................................................................................................................19120.00200051500
...........................................................................TTGGGATTTTTTAGATCAG..........................................................................................................................................19120.00200061400
...................................................................................................................................TACTGGCCTACTAAGTCTCAA................................................................................21120.0020209900
....................................................................................................................................ACTGGCCTACTAAGTCTCAATAT.............................................................................23120.00203061100
....................................................................................................................................ACTGGCCTACTAAGTCTCAATA..............................................................................22118.0018506700
..........................................................................GTTGGGATTTTTTAGATCAG..........................................................................................................................................20116.0016008800
.........................................................................AGTTGGGATTTTTTAGAT.............................................................................................................................................18115.00150051000
.........................................................................AGTTGGGATTTTTTAGATCAT..........................................................................................................................................21110.0010007300
.........................................................................AGTTGGGATTTTTTAGATCAGCAT.......................................................................................................................................24110.0010006400
....................................................................................................................................ACTGGCCTACTAAGTCTCAAT...............................................................................21110.0010105400
...........................................................................TTGGGATTTTTTAGATCAGCAT.......................................................................................................................................2219.009005400
....................................................................................................................................ACTGGCCTACTAAGTCTCAATT..............................................................................2218.008004400
...........................................................................TTGGGATTTTTTAGATCAGCAGA......................................................................................................................................2318.008004400
.........................................................................AGTTGGGATTTTTTAGATT............................................................................................................................................1917.007005200
.........................................................................AGTTGGGATTTTTTAGATCAGCTT.......................................................................................................................................2416.006002400
.........................................................................AGTTGGGATTTTTTAGATCAGA.........................................................................................................................................2215.005002300
......................................................................................................................................TGGCCTACTAAGTCTCAATATT............................................................................2214.004002110
...........................................................................TTGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2414.004001300
....................................................................................................................................ACTGGCCTACTAAGTCTCAA................................................................................2014.004001300
...........................................................................TTGGGATTTTTTAGATCA...........................................................................................................................................1814.004000400
..........................................................................GTTGGGATTTTTTAGATCA...........................................................................................................................................1913.003001200
......................................................................................................................................TGGCCTACTAAGTCTCAATAT.............................................................................2113.003002100
.........................................................................AGTTGGGATTTTTTAGATCT...........................................................................................................................................2013.003001200
...........................................................................TTGGGATTTTTTAGATCAGCAA.......................................................................................................................................2213.003002100
............................................................................TGGGATTTTTTAGATCAGC.........................................................................................................................................1912.002001100
...........................................................................TTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2212.002000200
.........................................................................AGTTGGGATTTTTTAGATCAGTTT.......................................................................................................................................2412.002000200
...........................................................................TTGGGATTTTTTAGATCAGCAGC......................................................................................................................................2312.002001100
.........................................................................AGTTGGGATTTTTTAGATCAGCC........................................................................................................................................2312.002000200
....................................................................................................................................ACTGGCCTACTAAGTCTCA.................................................................................1912.002001100
..........................................................................................................................................CTACTAAGTCTCAATA..............................................................................1611.001000100
.........................................................................AGTTGGGATTTTTTAGAA.............................................................................................................................................1811.001001000
....................................................................................................................................ACTGGCCTACTAAGTCTC..................................................................................1811.001001000
........................................................................TAGTTGGGATTTTTTAGATCAGC.........................................................................................................................................2311.001000100
.........................................................................AGTTGGGATTTTTTAGATCATA.........................................................................................................................................2211.001000100
...........................................................................TTGGGATTTTTTAGATCAGCT........................................................................................................................................2111.001001000
.........................................................................AGTTGGGATTTTTTAGATCAGCAC.......................................................................................................................................2411.001001000
...................................................................................................................................TACTGGCCTACTAAGTCTCAT................................................................................2111.001001000
........................................................................TAGTTGGGATTTTTTAGATCAG..........................................................................................................................................2211.001001000
.........................................................................AGTTGGGATTTTTTAGATCAGAT........................................................................................................................................2311.001000100
..........................................................................GTTGGGATTTTTTAGATCAGCC........................................................................................................................................2211.001001000
droGri2
--------------------------------------------------------GCGTGTGCCCTCATTATAGTTGGGATTTTTTAGATCAGCAGTTATTGATAAAGACCTT-T-A-TCGTAAATCTTCTACTGGCCTACTAAGTCCCAATATAATGGGAGTAAAACCCTCA----------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................TACTGGCCTACTAAGTCCCAAT...............................................................................2219.00990
............................................................................TGGGATTTTTTAGATCAGCAG.......................................................................................................................................2112.00211
...................................................................................................................................TACTGGCCTACTAAGTCCCA.................................................................................2011.00110
............................................................................TGGGATTTTTTAGATCAGCAGT......................................................................................................................................2211.00110
............................................................................TGGGATTTTTTAGATCAGCAGTT.....................................................................................................................................2311.00110
..........................................................................GTTGGGATTTTTTAGATCAGCAG.......................................................................................................................................2311.00101
..........................................................................GTTGGGATTTTTTAGATCAGCA........................................................................................................................................2211.00101

Generated: 10/20/2015 at 07:35 PM