dse_1654

Name	Class	Family	Strand
Copia2_I-int	LTR	Copia	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AAGTCTTGGGCGAGCAAAGAAAGTGTACACTGGCCTACCCGGACGACCACGTAAGCAGTACAATATGGACAATACAATGTATGCTGAAGAAGTCCCCGTGTGAACGAGGCAATGAGTATGCATAATTCTGCTGAAAGGAGAGCTTCTATGCAGAAGGAGATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCTCAGAGGGTCAGAATGCTATCGGATCGAAATGGGTGTTTGCAGTGAA ************************************************..........................(((((((((........((.(((....))).)).....)))))))))..((((((((.(((.....))).)).))))))((((((.....))))))..(((((((.........)))))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V115 head	M054 female body	V113 male body
.......................................................................ATACAATGTATGCTGAAGAA................................................................................................................................................................	20	0	7	0.14	1	1	0	0
...........................................................................AATGTATGGTGAAGAAGC..............................................................................................................................................................	18	2	12	0.08	1	0	1	0
......................................................................AATCAAATGTATGGTGAAGAA................................................................................................................................................................	21	3	16	0.06	1	0	0	1

TTCAGAACCCGCTCGTTTCTTTCACATGTGACCGGATGGGCCTGCTGGTGCATTCGTCATGTTATACCTGTTATGTTACATACGACTTCTTCAGGGGCACACTTGCTCCGTTACTCATACGTATTAAGACGACTTTCCTCTCGAAGATACGTCTTCCTCTACCTCTCAGAAGTTCGGTTACGCTGGACCTGCAACCACCTAGAGAGTCTCCCAGTCTTACGATAGCCTAGCTTTACCCACAAACGTCACTT ************************************************..........................(((((((((........((.(((....))).)).....)))))))))..((((((((.(((.....))).)).))))))((((((.....))))))..(((((((.........)))))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M054 female body
.....................................................................GTTCTGTTACATACGTCTTATT................................................................................................................................................................	22	3	12	0.08	1	1

Species	Coordinate	ID	Alignment
droSec2	scaffold_93:11028-11278 +	dse_1654	AAG--------TCTTGGG-CGAGCAAAGAAAGTGTACACTGGCCT-ACCCGGACGACCACGT---AAGCAGTACAATATGGACAATACAATGTATGCTGAAGAAGTCCCCGT----------GTGAACGAGGCAATGAGTATGCATAATTCTG-CTGAAAGGAGAGCTTCTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCTCAGAGGGTCAGAATGCTATCGGATCGAAATGGGTGTTTGC--------AGTGAA
droSim2	node_17191:2211-2471 -		AAG--------TCGTGGG-CGAGCAAAGAAAGTGTACACTGGCTT-ACCCGGACGACCACGT---AAGCAGTACAATATGGTCAATACAACGTATGCTGAAGAAGTTCCCGTCCCTACGAGTGTGAACGAGGCAATGAGTATGCATAATTCTG-CTGAATGGAGAGCTTTTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCTCAGAGGGTCAGAAAGCTATCGGATCGAAATGGGTGTTTGC--------AGTGAA
dm3	chr3LHet:1820104-1820361 +		T-----------CGTGGG-CGACCAAAGAATGTGTACACTGGCCT-ACCCGGACGACCACGT---AAGCAGTACAATATGGTAAATGCAATGTATGCCGAAGAAGTCCCGTTCCCTACGAGTTTCAACGAGGCAATGAGTGTGGATAATTCTG-CTGAATGGAGAGCTTCTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCCCAGAGGGTCAGAAAGCTATCGGATCGAAAAGGGTGTTTGC--------AGGGAA
droEre2	scaffold_4895:462221-462472 +		AAAACAAGTGGATCCTGGCAGACCTAAACT-------------------TATTCGACCGCGA---AAGCAGTTCCATGTCTTAGGAGCGGCAATTGGCAGTGATGTATTTATTCCGGTAAGCTACGAAGAAGCAATCAGATGTCCTGATTCGG-ATTTATGGTTGGAAGCAATGAATCGAGA-GTACGAGGCTCTTATGAACAACCACACTTGGCAGATAGTAGATCTTCCGAGAACACAACGAGCTATAGGCTGCAAATGGATATTCAC--------TGTGAA
droYak3	v2_chr2h_random_004:728598-728853 -		AGG--------TCCTGGG-CGACCAAAGAAAGTGTACACCGGCCT-GCCTGGACGGCCACGT---AAGCATTACAATATGGTCAATGCAATGTATGCTGAAGATGTCCCCGTCCCTACGAGTGTGAACGAGGCAATGGGAATGGATAATTCTG-ATGAATGGAAGGCTTCTATGCAGAAGGA-GATAGACAGTCTTGAAGCCAATGCGCCCTGGACTTTGG-----GTCCCAGAGGGTCAAAAAGCCATCGGATCGATATGGGTGTTTGC--------AGTGAA
droEug1	scf7180000407253:40245-40505 -		TGG--------ACCAGGG-CGTCCAAGACTCGTTAAAACTGGCAA-GCCGGGGCGACCACGT---AAGCAATACAACTGTCTGAATATGCTGAAGGCAGAGGATATACACATTCCAGCAAATTTGGGTGAGGTTAATCAGTCAGGAATGAAGC-AGGAATGGTCAGCATCGATTCAGAAGGA-GATGGATGCGCTAGAGGCCAATAACACGTGGGATCTAGTGGATCTGCCACAAGATAAAAGGGCTATAGGCTGCAAGTGGGTATTTGG--------CGTAAA
droBia1	scf7180000302383:5530-5764 -		AGG--------TCCAGGG-AGGCCGAAATTAATCCGTACCGGAAA-GCC-GGTCGTCCTGGGCGTAAAGAATACAATAAGCTAAACTTTATTGGAGTTGCCAACATCCAAGTGCCGAGCGGAGTCATTGAGGCGCTGAGCATGGAACATATAAAAAAAATGGAAGGCTGCGATACATAAGGA-GTTG-----------------------------TCTTGTTGAGCTTTCTGCTGGCGAAAGCAATATTGGGAGCAAATGGGTCTTTGC--------CATGAA
droTak1	scf7180000415746:9342-9602 +		AGG--------CCCAGGT-AGACCTAAGATAATTCGTACTGGAAG-GCCAGGACGACCACGT---AAGGAGTACAATATGCTTAACGCTATTGGAGTTGCCGACGTCCAAGTACCGAGTGGAGTCAAGGAGGCTTTGAGCTTGACACAGGCTG-AAGAATGGAAGCTTGCGATGCAGAAGGA-GTATTCTCAACTACAGTCCACCAAGACATGGAGTATTGTAGATCTTCCTCCTGGTGAGAGAACTATTGGATGCAAATGGGTGTTTGC--------GGTTAA
droEle1	scf7180000489069:50596-50857 -		AGG--------TCCAGGT-CGAACGAAAAAGATTAAAACCGGAGA-TCCAGGCCGACCACGT---AAGCAGTATAATATTCTGAATATGCT-----CAGAGGATGTACCAATACCTACGGGCATCAAGAAAGCGTCGAATTCTTCGATGTGTT-CGAAGTGGTCAGCCGCAATGAAGATAGGTGCACTGTGCATT--GCACGAACTCTACGTAAAAGTTCGCAGTTTTGCCCAAAGGCAAAAAGGGAAATGGAAGCAAATGGGTGTTTGGGTGTTTGGC-GTAA
droRho1	scf7180000770670:918-1178 +		AGG--------CCCAGGG-AGGCCGAAGTTAATCCATACGGGAAA-GCCAGGACGACCACGT---AAGGAATACAATAAGCTAAACGCTATTGGAGTTGCCAACATCCAAGTGCCGAGCGGAGTCAAGGAGGCGCTGAGCATGGAACATGCAG-AAGAATGGAAGGCAGCGATGCAGAAGGA-GTACTCTCAACTACAGTCCAGCAAGACATGGAGTCTTGTTGACCTTCCTGATGGCGAAAAGACTATTGGTAGCAAATGGGTCTTTGC--------CATCAA
droFic1	scf7180000449461:32388-32649 -		GGG--------TCCTGGA-AGACCAAAACTTGTTCGTACTGGCCTGGCGTGGGAGACCTAGG---AAGGAGTACCAAACTGTCAATGTCATAACCAAAAGTGATGTTGAGGTTCCAGCAAGCTAAAACGATGCATTAAGCTCCAAATATGCAG-AGAACTGGAAGAAGGCTATGCAACAGGA-AATTAGTAGTTTGCAAGAGAGGAAAACTTGGACACTCGTCGAGCTACCTGAGGGAGAGAAGGCCATTGGATGCAAATGGGTCTACGC--------GGTCAA
droKik1	scf7180000302787:48244-48498 +		-----------TCCAGGG-AGACCAAAACTGATTCGAACTGGGCG-GCGTGGGAGACCTCGA---AAGGAGTATCAGACTGTCAATGTCATAAAA---CGAGATATTGAGGTTCCAGCAAGCGTAAACGATGCATTGAGTTCCAAATATGCAG-AGGACTGGAAGAATTCTATGCAGCAGGA-AATTGAGAGCCTGCAAGAAAGGAAAACTTGGACACTCGTCGAGTTACCTGAGGGAGAGAAGGCCATTGGATGCAAGTGGGTCTTCGC--------GGTCAA
droAna3	scaffold_13469:62702-62962 +		AGG--------ACCAGGA-CGACCAAAGATGATACTCACTGGGCT-ACCTGGACGCCCGAAG---AAGCAATATACCATGCTAAATATCCTGACAACTGAGGATGTCTCAGTACCGAGTAGTTACAGCATGGCACTAAGCTCAGAGCATGCAG-ACAAATGGAAGGCATCGATTCAGAAGGA-GATGAATAGTTTGAAAGCCAATGGTACGTGGTCATTAGTTGACTTACCCGAAGGCCAGAAGACCATTGGATGCAAATGGGTATTTGC--------AGTTAA
droBip1	scf7180000396655:6785-7045 -		AGG--------CCCAGGT-AGGCCTAAGATAATTTGTACTGGAAG-GCCAGGACGACCACGT---AAGGAGTACAATATGCTTAACGCTATTGGAGTTGCCGACGTCCAAGTACCGAGTGGGGTCAAGGAGGCTTTGAGCACGACACAGGCTG-AAGAATGGAAGGTTGCGATGCAGAAGGA-GTATTCTCAACTACAGTTCACCAAGACATGGAGTCTTGTAAATCTTCCTCTTGGCGAGAGAACTATTGGATGCAAATGGGTGTTTGC--------GGTTAA
dp5	Unknown_singleton_1471:7963-8223 +		AGG--------ACCAGGA-CGCCCAACCATAGTACGGACGTGCAA-ACCAGGACGACCAAGG---AAGCAGTATCATATGCTCAATGCGATACTGGCAGCAGACGTACAAGTTCCACAAAACTACGCACAAGCTGAACGGTCTACTGAAGGCG-AGATATGGAAAGCTTCAATGAAGGACGA-GTACGAATCTCTCGTGAAGAACGGCACGTGGTCGCTTACTAAATTGCCTAGCGGGAAAAAGTCCATTGGATGCAGATGGGTTTACGC--------AGTTAA
droPer2	scaffold_2:2588040-2588300 -		AGG--------ACCAGGA-CGCCCAACCATAGTACGGACGGGCAG-ACCAGGACGACCAAGG---AAGCAGTATCATATGCTCAATGCGATACTGGCAGCAGACGTACAAGTTCCACAAAACTACGCACAAGCTGAACGGTCTACTGAAGGCG-AGATATGGAAAGCATCAATGAAGGACGA-GTACGAATCTCTCGTGAAGAACGGCACGTGGTCGCTTACTAAATTGCCTAGCGGGAAAAAGTCCATTGGATGCAAATGGGTTTACGC--------AGTTAA
droWil2	scf2_1100000004936:911511-911771 +		AGG--------ACCAGGG-CGTTCAAAAGTTATAAGAACGGGTAA-ACCAGGTAGACCTCGA---AAGCAGTATAATATGTTGAATATGCTAAATGTAGAAAAGGTAAAAGTTCCATTAGGAGTTAACGAAGCCATTAATGGCGAAATGGGCA-GCGAATGGATAGCATCAATGCAAAAGGA-GATAGATGCACTGAAGGCAAACAATACTTGGGAATTGGTAGAATTACCTGAGGGTAAGAAAGCTATTGGCTGTAAGTGGGTTTTTGC--------GATTAA
droVir3	scaffold_12936:68267-68534 -		AAG-CTCGTGGTTCAGGG-CGTCCACGAAAGATAAAAACTGGAAA-ACCAGGTAGACCCCGC---AAGCAGTATAATTGCCTGAATATGCTGAAGGCAGAGGAAATCGTCATTCCTGAAAGTTTTAGCGAAGCAAATGAGTCAGAAATGAGCC-AAGAATGGTCAGCATCGATTCAGAAGGA-GATAAAAGCACTTGAAGACAATAAGACTTGGGAGCTTGTGGAATTGCCAGCGAATAAGAAAGCGATAGGCTGCAAATGGGTCTTTGG--------CATAAA
droMoj3	scaffold_6500:13027856-13028116 +		AGG--------TCCAGGG-AGACCACGAATTGTTCGCACTGGGCG-TACAGGTCGTCCACGA---AAAGAGTACAATGTTCTGAATGTACTGGATGCTCGAAATGCTGTTGTTCCCACATGTGTTAGGGATGCATTTCAGTCAGAGCAATCTG-AAAACTGGAGATCGGCGATGCAGAAGGA-GTATGATAGCCTGAAGAACACTGAGACATGGAGTCTGGTCGATCTTCCAGCAGGCGAAAAAGCTATTGGTTGTAAATGGGTTTTTAC--------TACCAA
droGri2	scaffold_9966:2855-3111 -		AGG--------TCCTGGG-AGGCCAAAGAAAGTACGCACCGGGCA-GCCAGGACGCCCTCGA---AAGCAGTACAACATTTTGAATGTTATGACAACGGATGACGTAGCTGCACCT----GCGTCAATGCGGCCTTGAGTTCTGATCATGCCA-GGGAGTGGAGGGCATCGATGCAGAAGGA-GATAGACAGTCTAAAAGGAAACAAAACTTGGGAGTTGGTTGATCTACCGAAGGGAGAGAAGGCAATTGGCTGTAAATGGGTATTTGC--------AGTGAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSec2

AAG--------TCTTGGG-CGAGCAAAGAAAGTGTACACTGGCCT-ACCCGGACGACCACGT---AAGCAGTACAATATGGACAATACAATGTATGCTGAAGAAGTCCCCGT----------GTGAACGAGGCAATGAGTATGCATAATTCTG-CTGAAAGGAGAGCTTCTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCTCAGAGGGTCAGAATGCTATCGGATCGAAATGGGTGTTTGC--------AGTGAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....................................................................................ATACAATGTATGCTGAAGAA....................................................................................................................................................................................	20	7	0.14	1	0	0	0	1

droSim2

AAG--------TCGTGGG-CGAGCAAAGAAAGTGTACACTGGCTT-ACCCGGACGACCACGT---AAGCAGTACAATATGGTCAATACAACGTATGCTGAAGAAGTTCCCGTCCCTACGAGTGTGAACGAGGCAATGAGTATGCATAATTCTG-CTGAATGGAGAGCTTTTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCTCAGAGGGTCAGAAAGCTATCGGATCGAAATGGGTGTTTGC--------AGTGAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTG...................	22	5	422.60	2113	0	0	0	0	0	0	1240	0	853	19	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGT..................	23	5	251.60	1258	0	0	0	0	0	0	471	2	760	24	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTT.................	24	5	207.20	1036	0	0	0	0	0	0	496	0	521	18	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------......	22	5	195.60	978	0	0	2	3	0	0	2	287	13	105	140	2	413	11	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------A.....	23	5	134.40	672	0	0	5	12	0	0	3	156	3	70	59	0	355	9	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGT....................	21	5	132.00	660	0	0	0	0	0	0	421	1	229	7	2	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AG....	24	4	115.50	462	0	0	1	12	0	0	2	59	1	21	116	0	247	3	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGT...	25	4	86.50	346	0	0	2	6	0	0	3	61	2	11	100	0	156	5	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTGC--------......	27	5	71.80	359	0	0	0	0	0	0	221	1	133	3	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGG.....................	20	5	56.20	281	0	0	0	0	0	0	159	0	120	2	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTT................	25	5	39.40	197	0	0	0	0	0	0	52	0	134	10	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGG......................	19	5	38.80	194	0	0	0	0	0	0	125	0	67	2	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTTTGC--------......	24	5	35.60	178	0	0	0	1	0	0	92	19	44	7	11	1	3	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTG...............	21	5	32.40	162	0	0	0	3	0	0	0	17	0	13	14	0	106	9	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGA...	25	4	30.50	122	0	0	0	0	0	0	0	7	0	1	4	0	108	2	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AT....	24	5	29.60	148	0	0	0	1	0	0	1	20	3	22	2	0	95	4	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTGA.	27	4	24.50	98	0	0	0	3	0	0	0	8	0	1	19	0	67	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGT....................	16	5	20.80	104	0	0	0	0	0	0	0	5	0	0	99	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTG...............	26	5	18.80	94	0	0	0	1	0	0	36	0	53	4	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGT--------......	22	5	16.80	84	0	0	0	0	0	0	0	2	0	2	0	0	76	4	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTT................	20	5	11.00	55	0	0	0	0	0	0	0	2	0	4	4	0	38	7	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AC....	24	5	10.00	50	0	0	0	0	0	0	0	11	0	4	1	0	31	3	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTG..	26	4	9.25	37	0	0	1	0	0	0	0	1	0	0	18	0	17	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------T.....	23	5	8.80	44	0	0	0	0	0	0	0	2	1	1	0	0	39	1	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTT.................	19	5	5.60	28	0	0	0	0	0	0	1	4	0	1	11	0	3	8	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGAA..	26	4	4.25	17	0	0	0	0	0	0	0	0	0	0	0	0	16	1	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTGC--------AG....	29	4	4.25	17	0	0	0	0	0	0	5	0	12	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------ATA...	25	5	4.20	21	0	0	0	0	0	0	0	0	0	0	0	0	21	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATG.......................	18	5	4.00	20	0	0	0	0	0	0	10	0	10	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGT..................	18	5	3.80	19	0	0	0	0	0	0	0	6	0	0	13	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGACGTTGGTGGATCTCTCA....................................................	21	3	3.67	11	0	0	0	0	0	0	1	2	6	2	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGC...	25	4	3.50	14	0	0	0	0	0	0	0	5	0	0	1	0	8	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGT--------T.....	23	5	2.80	14	0	0	0	0	0	0	0	0	1	0	1	0	11	1	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTT...................	22	5	2.60	13	0	0	0	0	0	0	7	0	5	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGCTATCGGATCGAAATGGGTGTT.................	25	5	2.60	13	0	0	0	0	0	0	4	1	3	1	0	0	4	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGAT..	26	4	2.50	10	0	0	0	0	0	0	0	1	0	0	1	0	8	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTT..	26	4	2.50	10	0	0	0	0	0	0	0	0	0	0	1	0	9	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTT...............	21	5	2.40	12	0	0	0	0	0	0	0	0	0	0	0	0	10	2	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGA--------......	22	5	2.40	12	0	0	0	0	0	0	0	1	0	0	0	0	11	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTG...................	17	5	2.40	12	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------AGT...	18	4	2.25	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
.......................................................................................................................................................TG-CTGAATGGAGAGCTTTTATGCAGA..........................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................AAAGCTATCGGATCGAAATGGGTGTT.................	26	5	2.00	10	0	0	0	0	0	0	5	1	1	0	0	0	3	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGG.....................	15	5	2.00	10	0	0	0	0	0	0	0	5	0	0	5	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTAA--------......	22	5	1.80	9	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0
.................................................................................................................................................................................................................................................AAAGCTATCGGATCGAAATGGGTG...................	24	5	1.80	9	0	0	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTA...............	21	5	1.80	9	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------AG....	17	4	1.75	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTT.................	21	5	1.60	8	0	0	0	0	0	0	2	0	3	1	2	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------C.....	23	5	1.60	8	0	0	0	0	0	0	0	3	0	0	1	0	4	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTA................	20	5	1.60	8	0	0	0	0	0	0	0	1	0	1	0	0	5	1	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTGT.	27	4	1.50	6	0	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0
.....................................................................................................................................................................................................................................................CTATCGGATCGAAATGGGTGTTTGC--------......	25	5	1.40	7	0	0	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTTTGC--------A.....	25	5	1.40	7	0	0	0	0	0	0	0	0	4	1	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTTTG...............	23	5	1.40	7	0	0	0	0	0	0	4	2	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------TT....	24	5	1.40	7	0	0	0	0	0	0	0	0	0	1	1	0	5	0	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------......	15	5	1.40	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTTTGC--------AG....	26	4	1.25	5	0	0	0	0	0	0	1	1	1	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAAT........................	17	5	1.20	6	0	0	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAAGCTATCGGATCGAAATGGGT....................	23	5	1.20	6	0	0	0	0	0	0	3	0	2	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTA.................	24	5	1.20	6	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GAAAGCTATCGGATCGAAATGGGTGTT.................	27	5	1.20	6	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TAATTCTG-CTGAATGGAGAGCTTT..................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................CCACGT---AAGCAGTACAATATG............................................................................................................................................................................................................	21	4	1.00	4	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GCTTTTATGCAGAAGG.......................................................................................................	16	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................T---AAGCAGTACAATATGGTCAATACAA..................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTA..	26	4	1.00	4	0	0	0	1	0	0	0	0	0	0	1	0	2	0	0	0	0
....................................................................................................................................................................................................................................................GCTATCGGATCGAAATGGGTGTTTGC--------......	26	5	1.00	5	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGT--------TT....	24	5	1.00	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGAC..	26	5	1.00	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
.........................................................................................................................................................................................................................TTGGTGGATCTCTCAGAGGGTCAGAA.........................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGACGTTGGTGGATCTCTCAGAGGGTC.............................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGA.....................	20	5	0.80	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GAAAGCTATCGGATCGAAATGGG.....................	23	5	0.80	4	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................................................................GAAAGCTATCGGATCGAAATGGGTG...................	25	5	0.80	4	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGA..................	23	5	0.80	4	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AGAAAGCTATCGGATCGAAATGGG.....................	24	5	0.80	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AGAAAGCTATCGGATCGAAATGG......................	23	5	0.80	4	0	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTTA--------......	22	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGA--------T.....	23	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------A.....	16	5	0.80	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAA.........................	16	5	0.80	4	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGACGTTGGTGGATCTCT......................................................	19	3	0.67	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
............................................T-ACCCGGACGACCACGT---AAGCAGTACAATA..............................................................................................................................................................................................................	30	3	0.67	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGG......................	16	5	0.60	3	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAAA........................	17	5	0.60	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGG....................	21	5	0.60	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GAAAGCTATCGGATCGAAATGGGT....................	24	5	0.60	3	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTGC--------A.....	28	5	0.60	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AGAAAGCTATCGGATCGAAATGGGTGTT.................	28	5	0.60	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGCTATCGGATCGAAATGGGTG...................	23	5	0.60	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTA...................	22	5	0.60	3	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTGT--------......	27	5	0.60	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGCTATCGGATCGAAATGGG.....................	21	5	0.60	3	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTTT--------......	22	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------ATAA..	26	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
.................................................................................................................................................................................................................................................AAAGCTATCGGATCGAAATGG......................	21	5	0.60	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------ATC...	25	5	0.60	3	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTAT.	27	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................................................TGCGACCTGGACGTTGGTGGATCTC.......................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................CCAATGCGACCTGGACGTTGG...............................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................GACCTGGACGTTGGTGGATC.........................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................CGT---AAGCAGTACAATATGGTCAATA.....................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................ATCGAAATGGGTGTTTGC--------AGT...	21	4	0.50	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGTGTTTGC--------AGT...	27	4	0.50	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TATGCAGAAGGA-GATGGAGAGTCTT........................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................TGAGTATGCATAATTCTG-CTGAATGGAGA.......................................................................................................................	29	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AATGCGACCTGGACGTTGGTGGATC.........................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................TGGTGGATCTCTCAGAGGGTA.............................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGCTATCGGATCGAAATGGGT....................	22	5	0.40	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------ATCT..	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................................AGAAAGCTATCGGATCGAAATGGGT....................	25	5	0.40	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------ATAT..	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGTG....................	21	5	0.40	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AGAAAGCTATCGGATCGAAATGGGTG...................	26	5	0.40	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTAT--------......	22	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................................................................AAGCTATCGGATCGAAATGGGTGTTTGC--------......	28	5	0.40	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATCGGATCGAAATGGGTGTTTGC--------......	23	5	0.40	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CGGATCGAAATGGGTGTTTGC--------T.....	22	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAATGGGT....................	18	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................................................................................TGGATCTCTCAGAGGGTCAGAAAGT......................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTGAA	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTTA--------C.....	23	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................................ACCTGGACGTTGGTGGATC.........................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................TCTCAGAGGGTCAGAA.........................................	16	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................CCTGGACGTTGGTGGATCTCTC.....................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................TATGCAGAAGGA-GATGGAGAGTAA.........................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
............................................T-ACCCGGACGACCACGT---AAGCAGT....................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGACGTTGGTGGATCT........................................................	17	3	0.33	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................TACGAGTGTGAACGAGGCAATGAGTA...............................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------AGTGAA	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................ACCTGGACGTTGGTGGATCTC.......................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
............................................T-ACCCGGACGACCACGT---AAGCAGTACA.................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................ACCTGGACGTTGGTGGATCTCTC.....................................................	23	3	0.33	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TCAGAGGGTCAGAAAGCTATCGGA...............................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................TACGAGTGTGAACGAGGCAATGAGT................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGACGTTGGTGGAT..........................................................	15	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCGAAATGGGTGTTTGC--------AGTGA.	22	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATCGGATCGAAATGGGTGTTTGC--------AGT...	26	4	0.25	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................GAGGGTCAGAAAGCTATCGGATCGA...........................	25	4	0.25	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTAC.	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................TCGAAATGGGTGTTTGC--------AGT...	20	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTGC.	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGATT.	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................TGTGAACGAGGCAAT....................................................................................................................................................	15	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCGAAATGGGTGTTTGC--------AG....	19	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CGGATCGAAATGGGTGTTTGC--------AGT...	24	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGAAT.	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................GAAATGGGTGTTTGC--------AGTGA.	20	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGC--------AGTGCC	28	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CGGATCGAAATGGGTGTTTGC--------AG....	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGCTATCGGATCGAAATGGGTGTTTGC--------AGT...	30	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................AGAGGGTCAGAAAGCTATCGGA...............................	22	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................AAAGCTATCGGATCGAAATGGGTGTTTGC--------AG....	31	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................CGGATCGAAATGGGTGTTTGC--------AGTGA.	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAATGGGTGTTTGT--------C.....	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................GGATCGAAATGGGTGTTTGC--------......	20	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

dm3

T-----------CGTGGG-CGACCAAAGAATGTGTACACTGGCCT-ACCCGGACGACCACGT---AAGCAGTACAATATGGTAAATGCAATGTATGCCGAAGAAGTCCCGTTCCCTACGAGTTTCAACGAGGCAATGAGTGTGGATAATTCTG-CTGAATGGAGAGCTTCTATGCAGAAGGA-GATGGAGAGTCTTCAAGCCAATGCGACCTGGACGTTGGTGGATCTCCCAGAGGGTCAGAAAGCTATCGGATCGAAAAGGGTGTTTGC--------AGGGAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..........................................................................................................................................................................TATGCAGAAGGA-GATGGAGAGTCT.........................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................TATGCAGAAGGA-GATGGAGAGTCTT........................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0
..........................................................................................................................................................................................................AATGCGACCTGGACGTTGGTGGATC.........................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TGTGGATAATTCTG-CTGAATGGAGAGC.....................................................................................................................	27	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAATGCGACCTGGACGTTGGTGGATC.........................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TCCCAGAGGGTCAGAAAGCTATCGGA...............................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TATCGGATCGAAAAGGGTGTTTGC--------......	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TCGGATCGAAAAGGGTGTTTGC--------AGG...	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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............CGTGGG-CGACCAAAGAATGTGTAC.......................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................TGAATGGAGAGCTTCTATGCAGAAGGA-.....................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................TATGGTAAATGCAATGTATGCCGAAGAAG...................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AAAACAAGTGGATCCTGGCAGACCTAAACT-------------------TATTCGACCGCGA---AAGCAGTTCCATGTCTTAGGAGCGGCAATTGGCAGTGATGTATTTATTCCGGTAAGCTACGAAGAAGCAATCAGATGTCCTGATTCGG-ATTTATGGTTGGAAGCAATGAATCGAGA-GTACGAGGCTCTTATGAACAACCACACTTGGCAGATAGTAGATCTTCCGAGAACACAACGAGCTATAGGCTGCAAATGGATATTCAC--------TGTGAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.........................................................................................................TATTTATTCCGGTAAGCTACGAAGA..........................................................................................................................................................	25	3	0.33	1	1	0	0	0	0	0	0

droYak3

AGG--------TCCTGGG-CGACCAAAGAAAGTGTACACCGGCCT-GCCTGGACGGCCACGT---AAGCATTACAATATGGTCAATGCAATGTATGCTGAAGATGTCCCCGTCCCTACGAGTGTGAACGAGGCAATGGGAATGGATAATTCTG-ATGAATGGAAGGCTTCTATGCAGAAGGA-GATAGACAGTCTTGAAGCCAATGCGCCCTGGACTTTGG-----GTCCCAGAGGGTCAAAAAGCCATCGGATCGATATGGGTGTTTGC--------AGTGAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................GTATGCTGAAGATGTCCCCGTCC..........................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................ATTCTG-ATGAATGGAAGGCTT...................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................CTATGCAGAAGGA-GATAGA...............................................................................................	19	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................GGAAGGCTTCTATGCAGAAGGA-GAT..................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1
..........................................................................................................................GTGAACGAGGCAATGGGAATGG............................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................GAACGAGGCAATGGGAATGG............................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

TGG--------ACCAGGG-CGTCCAAGACTCGTTAAAACTGGCAA-GCCGGGGCGACCACGT---AAGCAATACAACTGTCTGAATATGCTGAAGGCAGAGGATATACACATTCCAGCAAATTTGGGTGAGGTTAATCAGTCAGGAATGAAGC-AGGAATGGTCAGCATCGATTCAGAAGGA-GATGGATGCGCTAGAGGCCAATAACACGTGGGATCTAGTGGATCTGCCACAAGATAAAAGGGCTATAGGCTGCAAGTGGGTATTTGG--------CGTAAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGG--------TCCAGGG-AGGCCGAAATTAATCCGTACCGGAAA-GCC-GGTCGTCCTGGGCGTAAAGAATACAATAAGCTAAACTTTATTGGAGTTGCCAACATCCAAGTGCCGAGCGGAGTCATTGAGGCGCTGAGCATGGAACATATAAAAAAAATGGAAGGCTGCGATACATAAGGA-GTTG-----------------------------TCTTGTTGAGCTTTCTGCTGGCGAAAGCAATATTGGGAGCAAATGGGTCTTTGC--------CATGAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGG--------CCCAGGT-AGACCTAAGATAATTCGTACTGGAAG-GCCAGGACGACCACGT---AAGGAGTACAATATGCTTAACGCTATTGGAGTTGCCGACGTCCAAGTACCGAGTGGAGTCAAGGAGGCTTTGAGCTTGACACAGGCTG-AAGAATGGAAGCTTGCGATGCAGAAGGA-GTATTCTCAACTACAGTCCACCAAGACATGGAGTATTGTAGATCTTCCTCCTGGTGAGAGAACTATTGGATGCAAATGGGTGTTTGC--------GGTTAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGG--------TCCAGGT-CGAACGAAAAAGATTAAAACCGGAGA-TCCAGGCCGACCACGT---AAGCAGTATAATATTCTGAATATGCT-----CAGAGGATGTACCAATACCTACGGGCATCAAGAAAGCGTCGAATTCTTCGATGTGTT-CGAAGTGGTCAGCCGCAATGAAGATAGGTGCACTGTGCATT--GCACGAACTCTACGTAAAAGTTCGCAGTTTTGCCCAAAGGCAAAAAGGGAAATGGAAGCAAATGGGTGTTTGGGTGTTTGGC-GTAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGG--------CCCAGGG-AGGCCGAAGTTAATCCATACGGGAAA-GCCAGGACGACCACGT---AAGGAATACAATAAGCTAAACGCTATTGGAGTTGCCAACATCCAAGTGCCGAGCGGAGTCAAGGAGGCGCTGAGCATGGAACATGCAG-AAGAATGGAAGGCAGCGATGCAGAAGGA-GTACTCTCAACTACAGTCCAGCAAGACATGGAGTCTTGTTGACCTTCCTGATGGCGAAAAGACTATTGGTAGCAAATGGGTCTTTGC--------CATCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GGG--------TCCTGGA-AGACCAAAACTTGTTCGTACTGGCCTGGCGTGGGAGACCTAGG---AAGGAGTACCAAACTGTCAATGTCATAACCAAAAGTGATGTTGAGGTTCCAGCAAGCTAAAACGATGCATTAAGCTCCAAATATGCAG-AGAACTGGAAGAAGGCTATGCAACAGGA-AATTAGTAGTTTGCAAGAGAGGAAAACTTGGACACTCGTCGAGCTACCTGAGGGAGAGAAGGCCATTGGATGCAAATGGGTCTACGC--------GGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

-----------TCCAGGG-AGACCAAAACTGATTCGAACTGGGCG-GCGTGGGAGACCTCGA---AAGGAGTATCAGACTGTCAATGTCATAAAA---CGAGATATTGAGGTTCCAGCAAGCGTAAACGATGCATTGAGTTCCAAATATGCAG-AGGACTGGAAGAATTCTATGCAGCAGGA-AATTGAGAGCCTGCAAGAAAGGAAAACTTGGACACTCGTCGAGTTACCTGAGGGAGAGAAGGCCATTGGATGCAAGTGGGTCTTCGC--------GGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGG--------ACCAGGA-CGACCAAAGATGATACTCACTGGGCT-ACCTGGACGCCCGAAG---AAGCAATATACCATGCTAAATATCCTGACAACTGAGGATGTCTCAGTACCGAGTAGTTACAGCATGGCACTAAGCTCAGAGCATGCAG-ACAAATGGAAGGCATCGATTCAGAAGGA-GATGAATAGTTTGAAAGCCAATGGTACGTGGTCATTAGTTGACTTACCCGAAGGCCAGAAGACCATTGGATGCAAATGGGTATTTGC--------AGTTAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
....................................................................................................................AGTAGTTACAGCATGGCACTAAGC................................................................................................................................................	24	20	0.35	7	4	3	0	0	0	0
........................AAAGATGATACTCACTGGGCT-AC............................................................................................................................................................................................................................................	23	19	0.32	6	6	0	0	0	0	0
........................AAAGATGATACTCACTGGGCT-ACC...........................................................................................................................................................................................................................................	24	19	0.26	5	4	1	0	0	0	0
........................AAAGATGATACTCACTGGGCT-ACCTG.........................................................................................................................................................................................................................................	26	19	0.26	5	5	0	0	0	0	0
..................................................................................................................CGAGTAGTTACAGCATGGCACTAAG.................................................................................................................................................	25	20	0.20	4	4	0	0	0	0	0
............................ATGATACTCACTGGGCT-ACCTG.........................................................................................................................................................................................................................................	22	19	0.16	3	3	0	0	0	0	0
........................AAAGATGATACTCACTGGGCT-A.............................................................................................................................................................................................................................................	22	19	0.16	3	2	0	1	0	0	0
....................................................................................................................AGTAGTTACAGCATGGCACTAAGCTCA.............................................................................................................................................	27	20	0.15	3	3	0	0	0	0	0
...........................................................................................................................................................................................AATAGTTTGAAAGCCAATGGTACGTGG......................................................................	27	20	0.15	3	2	0	0	0	1	0
....................................................................................................................AGTAGTTACAGCATGGCACTAAG.................................................................................................................................................	23	20	0.15	3	3	0	0	0	0	0
.........................AAGATGATACTCACTGGGCT-ACCTG.........................................................................................................................................................................................................................................	25	19	0.11	2	2	0	0	0	0	0
...........................GATGATACTCACTGGGCT-ACCT..........................................................................................................................................................................................................................................	22	19	0.11	2	1	1	0	0	0	0
.................................................................................................................CCGAGTAGTTACAGCATGGCAC.....................................................................................................................................................	22	20	0.10	2	2	0	0	0	0	0
....................................................................................................................AGTAGTTACAGCATGGCACTAAGCT...............................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................................................TAGTTTGAAAGCCAATGGTACGTGG......................................................................	25	20	0.10	2	1	0	1	0	0	0
...........................................................................................................TCAGTACCGAGTAGTTACAGCATGGCAC.....................................................................................................................................................	28	20	0.10	2	1	1	0	0	0	0
........................AAAGATGATACTCACTGGGC................................................................................................................................................................................................................................................	20	19	0.05	1	1	0	0	0	0	0
........................AAAGATGATACTCACTGGGCT-ACCTGGA.......................................................................................................................................................................................................................................	28	19	0.05	1	1	0	0	0	0	0
............................ATGATACTCACTGGGCT-ACCTGG........................................................................................................................................................................................................................................	23	19	0.05	1	1	0	0	0	0	0
.........................AAGATGATACTCACTGGGCT-A.............................................................................................................................................................................................................................................	21	19	0.05	1	1	0	0	0	0	0
...........................GATGATACTCACTGGGCT-ACCTG.........................................................................................................................................................................................................................................	23	19	0.05	1	1	0	0	0	0	0
...........................GATGATACTCACTGGGCT-ACC...........................................................................................................................................................................................................................................	21	19	0.05	1	1	0	0	0	0	0
........................AAAGATGATACTCACTGGGCT-AT............................................................................................................................................................................................................................................	23	19	0.05	1	1	0	0	0	0	0
........................AAAGATGATACTCACTGGGCT-ACCTGG........................................................................................................................................................................................................................................	27	19	0.05	1	1	0	0	0	0	0
...................................................................................................................GAGTAGTTACAGCATGGCACTA...................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................TACAGCATGGCACTAAGCTCAGAGCATG......................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
...............................................................................................................TACCGAGTAGTTACAGCATGGCAC.....................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................GA-GATGAATAGTTTGAAAGCCAA................................................................................	23	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................ATAGTTTGAAAGCCAATGGTACGTGG......................................................................	26	20	0.05	1	1	0	0	0	0	0
...............................................................................................................TACCGAGTAGTTACAGCATGGCACT....................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................AAGGCATCGATTCAGAAGGA-GATG.................................................................................................	24	20	0.05	1	0	1	0	0	0	0
............................................................................................................................................................................................................................GTTGACTTACCCGAAGGCCAGAA.........................................	23	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................GTAGTTACAGCATGGCACTAAGC................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................ATAGTTTGAAAGCCAATGGTACGT........................................................................	24	20	0.05	1	0	1	0	0	0	0
................................TACTCACTGGGCT-ACCTGGACGCCCGAA...............................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
...............................ATACTCACTGGGCT-ACCTGGACGCCC..................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..................................................................................................................CGAGTAGTTACAGCATGGCACTAAGC................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................ATAGTTTGAAAGCCAATGGTACGTGGA.....................................................................	27	20	0.05	1	0	1	0	0	0	0
............................................................................................................................................................................................ATAGTTTGAAAGCCAATGGTAC..........................................................................	22	20	0.05	1	1	0	0	0	0	0
....................................................................................................................AGTAGTTACAGCATGGCACTA...................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................CATTAGTTGACTTACCCGAAGGCCAGAA.........................................	28	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................................TAGTTTGAAAGCCAATGGTACG.........................................................................	22	20	0.05	1	1	0	0	0	0	0
.........................................................................TACCATGCTAAATATCCTGACAAC...........................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
..................................................................................................................CGAGTAGTTACAGCATGGCACTAA..................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................GGTCATTAGTTGACTTACCCGAAGGC..............................................	26	20	0.05	1	0	0	0	0	0	1
...................................................................................................................GAGTAGTTACAGCATGGCACTAAGCTCA.............................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................TTTGAAAGCCAATGGTACGTGG......................................................................	22	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................TTTGAAAGCCAATGGTACGTGGTCAT..................................................................	26	20	0.05	1	0	1	0	0	0	0
...................................................GACGCCCGAAG---AAGCAATATACCATGC...........................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................TCAGAAGGA-GATGAATAGTTTGAAAGC...................................................................................	27	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................AGTTGACTTACCCGAAGGCCAGAAG........................................	25	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................TTGACTTACCCGAAGGCCAGAAGACCAT...................................	28	20	0.05	1	0	1	0	0	0	0
.......................................................................................................................................................AG-ACAAATGGAAGGCATCGATTCA............................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................TTACAGCATGGCACTAAGCTCAGA...........................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................TTACCCGAAGGCCAGAAGACCATTGG................................	26	20	0.05	1	1	0	0	0	0	0
................................TACTCACTGGGCT-ACCTGGACGC....................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...................................................................................................................GAGTAGTTACAGCATGGCACTAA..................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................AGCATGGCACTAAGCTCAGAGC.........................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................AGTTACAGCATGGCACTAAGCT...............................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0

droBip1

AGG--------CCCAGGT-AGGCCTAAGATAATTTGTACTGGAAG-GCCAGGACGACCACGT---AAGGAGTACAATATGCTTAACGCTATTGGAGTTGCCGACGTCCAAGTACCGAGTGGGGTCAAGGAGGCTTTGAGCACGACACAGGCTG-AAGAATGGAAGGTTGCGATGCAGAAGGA-GTATTCTCAACTACAGTTCACCAAGACATGGAGTCTTGTAAATCTTCCTCTTGGCGAGAGAACTATTGGATGCAAATGGGTGTTTGC--------GGTTAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGG--------ACCAGGA-CGCCCAACCATAGTACGGACGTGCAA-ACCAGGACGACCAAGG---AAGCAGTATCATATGCTCAATGCGATACTGGCAGCAGACGTACAAGTTCCACAAAACTACGCACAAGCTGAACGGTCTACTGAAGGCG-AGATATGGAAAGCTTCAATGAAGGACGA-GTACGAATCTCTCGTGAAGAACGGCACGTGGTCGCTTACTAAATTGCCTAGCGGGAAAAAGTCCATTGGATGCAGATGGGTTTACGC--------AGTTAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................................................................................................................................................GAAAGCTTCAATGAAGGACGA-GTACG................................................................................................	26	1	4.00	4	0	0	0	0	0	0	0	3	1	0
.............................TAGTACGGACGTGCAA-ACCAGGACGA....................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	1	0
........................AACCATAGTACGGACGTGCAA-ACCAA.........................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	2	0
................................TACGGACGTGCAA-ACCAGGACGACC..................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................GAAAGCTTCAATGAAGGACGA-GTA..................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................TAGTACGGACGTGCAA-ACCAGGACGAC...................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	1	1	0
........................................................................................................GTACAAGTTCCACAAAACTACGCAC...........................................................................................................................................................	25	20	1.85	37	0	34	3	0	0	0	0	0	0	0
.......................................................................TATCATATGCTCAATGCGATACTGGCA..........................................................................................................................................................................................	27	20	1.50	30	0	29	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGG..............................................	23	20	1.45	29	0	24	2	0	1	0	0	0	2	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCACGTGG......................................................................	24	20	1.25	25	0	21	0	0	0	0	0	0	4	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGG...............................................	22	20	1.20	24	0	22	0	0	0	0	0	2	0	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAGG.....................................................................................................................................	25	19	1.00	19	0	5	0	0	0	0	0	1	13	0
..............................................................................................................................................TACTGAAGGCG-AGATATGGAAAGCT....................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................GAAAGCTTCAATGAAGGACGA-GTAC.................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................CGCCCAACCATAGTACGGACGT...................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AGA...............................................................................................................................	23	20	0.80	16	0	10	0	0	0	0	3	0	2	1
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATTGG................................	25	20	0.75	15	0	4	0	0	3	0	8	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGC....................................................................................................................................	19	20	0.70	14	0	5	0	0	1	0	0	3	5	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAG......................................................................................................................................	24	19	0.68	13	0	6	0	0	0	0	0	0	7	0
.......................................................................TATCATATGCTCAATGCGATACTGGC...........................................................................................................................................................................................	26	20	0.65	13	0	10	1	0	0	0	0	0	2	0
......................................................................................................................................................................................................................TCGCTTACTAAATTGCCTAGCGGG..............................................	24	20	0.60	12	0	9	0	0	0	0	1	0	2	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGGA.............................................	24	20	0.55	11	0	10	0	0	1	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AGAT..............................................................................................................................	24	20	0.50	10	0	0	0	0	0	0	2	5	3	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACG...............	20	20	0.50	10	0	1	0	0	0	0	0	1	8	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGG...............................................	21	20	0.50	10	0	9	0	0	1	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AGATATG...........................................................................................................................	27	20	0.50	10	0	2	0	0	0	0	0	3	5	0
...........................................................................................................................................................................................................................TACTAAATTGCCTAGCGGGAAAAAG........................................	25	20	0.50	10	0	4	0	0	0	0	6	0	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGGA.............................................	23	20	0.45	9	0	9	0	0	0	0	0	0	0	0
.......................................................................TATCATATGCTCAATGCGATACTGG............................................................................................................................................................................................	25	20	0.45	9	0	9	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------AGT...	24	20	0.45	9	0	1	0	0	0	0	4	1	3	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAGGC....................................................................................................................................	26	19	0.42	8	0	1	0	0	0	0	0	0	6	1
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------AG....	23	20	0.40	8	0	1	0	0	0	0	0	0	7	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	27	20	0.40	8	0	2	0	0	0	0	0	0	6	0
..........................................................................CATATGCTCAATGCGATACTGGCA..........................................................................................................................................................................................	24	20	0.40	8	0	6	0	0	0	0	0	2	0	0
........................................................................................................GTACAAGTTCCACAAAACTACGCACAAGC.......................................................................................................................................................	29	20	0.35	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AG................................................................................................................................	22	20	0.35	7	0	3	0	0	0	0	0	2	2	0
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATTGGA...............................	26	20	0.35	7	0	2	0	0	0	0	3	2	0	0
..........................................................................CATATGCTCAATGCGATACTGGC...........................................................................................................................................................................................	23	20	0.35	7	0	6	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGGAA............................................	25	20	0.35	7	0	6	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGC.................................................	20	20	0.35	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AGATA.............................................................................................................................	25	20	0.35	7	0	5	0	0	0	0	1	0	1	0
................................................................................................................TCCACAAAACTACGCACAAGCTGAACGG................................................................................................................................................	28	20	0.35	7	0	4	0	0	0	0	0	1	2	0
..........................................................................................................ACAAGTTCCACAAAACTACGCACAAGC.......................................................................................................................................................	27	20	0.35	7	0	7	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTGGATGCAGATGGGTTTACG...............	21	20	0.30	6	0	0	0	0	0	0	1	1	4	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGG..............................................	22	20	0.30	6	0	5	1	0	0	0	0	0	0	0
................................................CAGGACGACCAAGG---AAGCAGTATC.................................................................................................................................................................................................................	24	20	0.30	6	0	1	0	0	0	0	0	0	5	0
.........................................................................................................TACAAGTTCCACAAAACTACGCACAAGC.......................................................................................................................................................	28	20	0.30	6	0	3	0	0	0	0	0	0	3	0
......................................................................................................................................................................................................................TCGCTTACTAAATTGCCTAGCGG...............................................	23	20	0.30	6	0	6	0	0	0	0	0	0	0	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTACTG.........................................................................................................................................	25	20	0.30	6	0	5	0	0	0	0	1	0	0	0
.......................................................................TATCATATGCTCAATGCGATACTG.............................................................................................................................................................................................	24	20	0.30	6	0	6	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-AGA...............................................................................................................................	22	20	0.30	6	0	5	0	0	0	0	0	0	1	0
..........................................................................CATATGCTCAATGCGATACTGG............................................................................................................................................................................................	22	20	0.30	6	0	6	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-A.................................................................................................................................	20	20	0.25	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTACT..........................................................................................................................................	24	20	0.25	5	0	3	0	0	0	0	0	0	2	0
..................................................................................................GCAGACGTACAAGTTCCACAAAAC..................................................................................................................................................................	24	20	0.25	5	0	3	0	0	0	0	0	0	2	0
.........................................................................................................TACAAGTTCCACAAAACTACGCAC...........................................................................................................................................................	24	20	0.25	5	0	4	0	0	0	0	0	0	1	0
..........................................................................................................ACAAGTTCCACAAAACTACGCAC...........................................................................................................................................................	23	20	0.25	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGG.....................................................................................................................................	18	20	0.25	5	0	4	0	0	0	0	0	0	1	0
.........................................................................TCATATGCTCAATGCGATACTGGCA..........................................................................................................................................................................................	25	20	0.25	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-AGATAT............................................................................................................................	26	20	0.20	4	0	2	0	0	0	0	2	0	0	0
..............................................................................TGCTCAATGCGATACTGGCAGCAGACG...................................................................................................................................................................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCTCGTGAAGAACGGCACGTGGT.....................................................................	23	20	0.20	4	0	2	0	0	0	0	0	1	1	0
..................................................................................................................................................................................................................................TTGCCTAGCGGGAAAAAGTCCATTGG................................	26	20	0.20	4	0	0	0	0	0	0	4	0	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGC.................................................	19	20	0.20	4	0	4	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTCTCGTGAAGAACGGCACGTGG......................................................................	23	20	0.20	4	0	3	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................TTGGATGCAGATGGGTTTACGC--------AG....	24	20	0.20	4	0	0	0	0	0	0	0	0	4	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCG................................................	21	20	0.20	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-AGATATG...........................................................................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	4	0
........................................................................................................GTACAAGTTCCACAAAACTACGC.............................................................................................................................................................	23	20	0.20	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TAAATTGCCTAGCGGGAAAAAGTCCAT...................................	27	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGT--------......	21	20	0.15	3	0	1	0	0	0	0	0	0	2	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTAC...........................................................................................................................................	23	20	0.15	3	0	0	0	0	0	0	0	2	1	0
........................................................................ATCATATGCTCAATGCGATACTGGCA..........................................................................................................................................................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TCGCTTACTAAATTGCCTAGCGGGA.............................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCAC..........................................................................	20	20	0.15	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................GTACAAGTTCCACAAAACTACGCA............................................................................................................................................................	24	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCTGAACGGTCTACTGAAGGCG-A.................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	3	0
................................................................................................................................................................................................TCTCGTGAAGAACGGCACGTGGTCGCT.................................................................	27	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................AACTACGCACAAGCTGAACGGTCTACT..........................................................................................................................................	27	20	0.15	3	0	0	0	0	0	0	0	0	3	0
....................................................................................................................................CTGAACGGTCTACTGAAGGCG-AGA...............................................................................................................................	24	20	0.15	3	0	2	0	0	0	0	0	0	1	0
................................................................................................................TCCACAAAACTACGCACAAGCTGAAC..................................................................................................................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATTGGATGCAGATGGGTTTACG...............	22	20	0.15	3	0	0	0	0	0	0	0	0	3	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCACGTG.......................................................................	23	20	0.15	3	0	2	0	0	0	0	0	1	0	0
.........................................................................TCATATGCTCAATGCGATACTGGCAGC........................................................................................................................................................................................	27	20	0.15	3	0	2	1	0	0	0	0	0	0	0
....................................................................CAGTATCATATGCTCAATGCGATAC...............................................................................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	3	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	23	20	0.15	3	0	1	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCG................................................	20	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGGAAA...........................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................AGCAGACGTACAAGTTCCACAAAAC..................................................................................................................................................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAG..................................................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..........................................................AAGG---AAGCAGTATCATATGCTCAA.......................................................................................................................................................................................................	24	20	0.15	3	0	0	0	0	0	0	0	3	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCACG.........................................................................	21	20	0.15	3	0	1	0	0	0	0	0	0	2	0
........................................................................................................GTACAAGTTCCACAAAACTACGCACA..........................................................................................................................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGA........................................................................................................................................	22	20	0.15	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TACGAATCTCTCGTGAAGAACGGC............................................................................	24	20	0.15	3	0	0	0	0	0	0	0	2	1	0
..........................................................................................................................................GGTCTACTGAAGGCG-AGATATGG..........................................................................................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................ACTACGCACAAGCTGAACGGTCTAC...........................................................................................................................................	25	20	0.15	3	0	2	0	0	0	0	0	1	0	0
...........................................AA-ACCAGGACGACCAAGG---AAGCA......................................................................................................................................................................................................................	23	17	0.12	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAGGCG-A.................................................................................................................................	28	19	0.11	2	0	0	0	0	0	0	0	0	2	0
.....................................................................................................................................................................................................................................CCTAGCGGGAAAAAGTCCATTGG................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CAATGAAGGACGA-GTACGAATCTC..........................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................A-GTACGAATCTCTCGTGAAGAACGGC............................................................................	26	20	0.10	2	0	0	0	0	0	0	0	0	2	0
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATTG.................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................TCAATGCGATACTGGCAGCAGAC....................................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-AG................................................................................................................................	21	20	0.10	2	0	1	0	0	0	0	0	1	0	0
......................................................GACCAAGG---AAGCAGTATCATATG............................................................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................AAAAAGTCCATTGGATGCAGA.........................	21	20	0.10	2	0	0	0	0	0	0	0	0	2	0
........................................................................................................GTACAAGTTCCACAAAACTACGCACAAG........................................................................................................................................................	28	20	0.10	2	0	2	0	0	0	0	0	0	0	0
................................................................................................CAGCAGACGTACAAGTTCCACA......................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................TGCTCAATGCGATACTGGCAGCA.......................................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATTGGATGCAGATGGGTTTACGC--------AGT...	26	20	0.10	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGGAAAA..........................................	27	20	0.10	2	0	0	0	0	0	0	0	0	2	0
...................................................................................................................ACAAAACTACGCACAAGCTGAACGG................................................................................................................................................	25	20	0.10	2	0	1	0	0	0	0	0	0	1	0
.............................................................................................TGGCAGCAGACGTACAAGTTCCACAA.....................................................................................................................................................................	26	20	0.10	2	0	1	0	0	0	0	0	0	1	0
.....................................................................................TGCGATACTGGCAGCAGACGTACAA..............................................................................................................................................................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................TGCTCAATGCGATACTGGC...........................................................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..........................................................................CATATGCTCAATGCGATACTGGCAGC........................................................................................................................................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTACTGA........................................................................................................................................	26	20	0.10	2	0	1	0	0	0	0	0	1	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-A.................................................................................................................................	21	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................TAAATTGCCTAGCGGGAAAAAGTCCA....................................	26	20	0.10	2	0	0	0	0	0	0	2	0	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCA...........................................................................	19	20	0.10	2	0	1	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................TTGCCTAGCGGGAAAAAGTCCATTGGA...............................	27	20	0.10	2	0	1	0	0	0	0	1	0	0	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAA......................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	2	0	0
.........................................................................TCATATGCTCAATGCGATACTGG............................................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................TCAATGCGATACTGGCAGCAGACG...................................................................................................................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................A-GTACGAATCTCTCGTGAAGAACGGCA...........................................................................	27	20	0.10	2	0	1	0	0	0	0	0	0	1	0
.................................................AGGACGACCAAGG---AAGCAGT....................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................................TAAATTGCCTAGCGGGAAAAAGTCC.....................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TCCATTGGATGCAGATGGGTTTACGC--------......	26	20	0.10	2	0	1	0	0	1	0	0	0	0	0
............................................................................................................................................................................TGAAGGACGA-GTACGAATCTCTCG.......................................................................................	24	20	0.10	2	0	1	0	0	0	0	0	0	1	0
.................................................................................................................CCACAAAACTACGCACAAGCTGAAC..................................................................................................................................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................ACGGTCTACTGAAGGCG-AGATATG...........................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	2	0	0
................................................................................................................................CAAGCTGAACGGTCTACTGAAGG.....................................................................................................................................	23	20	0.10	2	0	1	0	0	0	0	0	0	1	0
........................................................................................................................ACTACGCACAAGCTGAACGGTCTACT..........................................................................................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................CTACTGAAGGCG-AGATATG...........................................................................................................................	19	20	0.10	2	0	1	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCAAA.........................................................................	21	20	0.10	2	0	0	0	0	0	0	0	1	1	0
.....................................................................................................................................................................................................TGAAGAACGGCACGTGGT.....................................................................	18	20	0.10	2	0	2	0	0	0	0	0	0	0	0
...............................................................................GCTCAATGCGATACTGGCAGCAGAC....................................................................................................................................................................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGTGAAGAACGGCACGTGG......................................................................	20	20	0.10	2	0	1	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGGAAA...........................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................TGCGATACTGGCAGCAGACGTACAAGT............................................................................................................................................................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCACGTGGT.....................................................................	25	20	0.10	2	0	1	1	0	0	0	0	0	0	0
..........................................CAA-ACCAGGACGACCAAGG---AAGCAGT....................................................................................................................................................................................................................	26	17	0.06	1	0	1	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGACGACCAAGG---AAGCAGTAT..................................................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................CAA-ACCAGGACGACCAAGG---AAGCAGTATC.................................................................................................................................................................................................................	29	17	0.06	1	0	0	0	0	0	0	1	0	0	0
..............................................ACCAGGACGACCAAGG---AAGCAGT....................................................................................................................................................................................................................	23	17	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................CAA-ACCAGGACGACCAAGG---...........................................................................................................................................................................................................................	19	18	0.06	1	0	0	0	0	0	0	1	0	0	0
..........................................CAA-ACCAGGACGACCAAGG---A..........................................................................................................................................................................................................................	20	18	0.06	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................TACGCACAAGCTGAACGGTCTACTGAAG......................................................................................................................................	28	19	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................GACCAAGG---AAGCAGTATCATATGC...........................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................GAATCTCTCGTGAAGAACGGCAC..........................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................ACTACGCACAAGCTGAACGGT...............................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................AATTGCCTAGCGGGAAAAAGTC......................................	22	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................CACAAAACTACGCACAAGCTGAACGGT...............................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................TATCATATGCTCAATGCGATAC...............................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AATGAAGGACGA-GTACGAATCC...........................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	1	0
....................................................................................................AGACGTACAAGTTCCACAAAACTACGC.............................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................ATATGCTCAATGCGATACTGGCA..........................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TAGCGGGAAAAAGTCCATTGGATG.............................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................TATCATATGCTCAATGCGATACTGGCAGC........................................................................................................................................................................................	29	20	0.05	1	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TGAAGAACGGCACGTGGTCGCTT................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------AGTT..	25	20	0.05	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................CAGACGTACAAGTTCCACAAAAC..................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................TACTGGCAGCAGACGTACAAGTTCCAC.......................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................TATGCTCAATGCGATACTGGCAG.........................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................TCAATGAAGGACGA-GTACGAATCTC..........................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................AGCAGACGTACAAGTTCCACAAAA...................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................CGGTCTACTGAAGGCG-AGAT..............................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGTCGCTTACTAAATTGCCTAG..................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................TGAAGGACGA-GTACG................................................................................................	15	20	0.05	1	0	0	0	0	0	0	0	1	0	0
............................................................................................................AAGTTCCACAAAACTACGCACAAGA.......................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................ATCATATGCTCAATGCGATACTGG............................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................TACTGGCAGCAGACGTACAAGT............................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..G--------ACCAGGA-CGCCCAACCATAGTACGG.......................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................G---AAGCAGTATCATATGCTCAATGCGATCGG..............................................................................................................................................................................................	30	20	0.05	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................CTAGCGGGAAAAAGTCCATTGG................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................GCACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................ACAAGTTCCACAAAACTACGCACAAGCT......................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................AGCTGAACGGTCTACTGAAGGC....................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCTCGTGAAGAACGGCACGTGT......................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-AGAT..............................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AATGAAGGACGA-GTACGAATCTCTC........................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................AATCTCTCGTGAAGAACGGCACGTGG......................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CTGAACGGTCTACTGAAGG.....................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................AGCGGGAAAAAGTCCATTGGATGC............................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................GGTCTACTGAAGGCG-AGAT..............................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................ACTGGCAGCAGACGTACAAGTTCC.........................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................CTGAACGGTCTACTGAAG......................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TGCAGATGGGTTTACGC--------AGT...	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TACGAATCTCTCGTGAAGAACGGCAAA.........................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................GTCTACTGAAGGCG-AGATATG...........................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCTCGTGAAGAACGGCACGTGGTCG...................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................CAAGCTGAACGGTCTACTGAAGGC....................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................GTACGAATCTCTCGTGAAGAACGGCA...........................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................ACGAATCTCTCGTGAAGAACGGC............................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------AGTTAA	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCGTGAAGAACGGCACGTGGTCGCT.................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATTGGAAA.............................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................CGCACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CAATGAAGGACGA-GTACG................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................TTCCACAAAACTACGCACAAGCTGAA...................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................ACTAAATTGCCTAGCGGGAAAAAGTCC.....................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................CTCAATGCGATACTGGCAGC........................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................GCAGACGTACAAGTTCCACAAA....................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..............................................................................TGCTCAATGCGATACTGGA...........................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------A.....	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATTGGATGCAGATGGGTT...................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGGAA............................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AAGGACGA-GTACGAATCTCTC........................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATT..................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................ACAAAACTACGCACAAGCTGAACGGTA..............................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGTCGCTTACTAAATTGCCTA...................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCAATGAAGGACGA-GTACGAATC............................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGCG-..................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...........................................................................ATATGCTCAATGCGATACTGGCAG.........................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................TGCTCAATGCGATACTGGCAGCAGAC....................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATCTCTCGTGAAGAACGGCAC..........................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TCCATTGGATGCAGATGGGTTTACGC--------A.....	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TCTACTGAAGGCG-AGATATG...........................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................TGAAGGACGA-GTACGAATCTCTC........................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................ACTGAAGGCG-AGATATG...........................................................................................................................	17	20	0.05	1	0	0	0	0	0	0	0	1	0	0
................................................................................................................TCCACAAAACTACGCACAAGCTGAACG.................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TCCATTGGATGCAGATGGGTTTACGC--------AG....	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCTGAACGGTCTACTGAAGG.....................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TCATATGCTCAATGCGATACTG.............................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................ACAAGTTCCACAAAACTACGCA............................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AGTCCATTGGATGCAGATGGGT....................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TCGCTTACTAAATTGCCTAGCGGA..............................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................TACTGAAGGCG-AGATATG...........................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	1	0	0
.............................................................................................................................................CTACTGAAGGCG-AGATATGGAAA.......................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................AAAAAGTCCATTGGATGCAGATGG......................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCTCGTGAAGAACGGCACGTGGTA....................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TTGCCTAGCGGGAAAAAGTCCATTG.................................	25	20	0.05	1	0	0	0	0	0	0	1	0	0	0
........................................................................ATCATATGCTCAATGCGATA................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGGATGCAGATGGGTTTACGC--------AA....	23	20	0.05	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................TCCACAAAACTACGCACAAGC.......................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTCTCGTGAAGAACGGCACG.........................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TACGAATCTCTCGTGAAGAACGG.............................................................................	23	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................TTACTAAATTGCCTAGCGGGA.............................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................TATCATATGCTCAATGCGATACT..............................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TACGAATCTCTCGTGAAGAACGGCAA..........................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................TACTGAAGGCG-AGATATGGAAAG......................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................AAAGTCCATTGGATGCAGATT.......................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................TGAAGAACGGCACGTGGAA....................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................TCGTGAAGAACGGCACGTGGTCGC..................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TACTAAATTGCCTAGCGGGA.............................................	20	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.............................................................................ATGCTCAATGCGATACTGG............................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................ACGGCACGTGGTCGCTTACTAAATTGC......................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................ACGCACAAGCTGAACGGTCTACTG.........................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................GGTCTACTGAAGGCG-AGATATGGAAA.......................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..................................................GGACGACCAAGG---AAGCAGTATC.................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AATGAAGGACGA-GTACGAATC............................................................................................	21	20	0.05	1	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TGAAGAACGGCACGTGGA.....................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................CGACCAAGG---AAGCAGTATC.................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................ACGCACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	1	0
...............................................................................GCTCAATGCGATACTGGCAGCAGA.....................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................GAACGGTCTACTGAAGGCG-AGATAT............................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TCCATTGGATGCAGATGGGTTTACGC--------AA....	28	20	0.05	1	0	0	0	0	0	0	0	1	0	0
.............................................................G---AAGCAGTATCATATGCTCAATGCGA..................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GTACAAGTTCCACAAAACTACG..............................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................TACAAGTTCCACAAAACTACGCACAAG........................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

AGG--------ACCAGGA-CGCCCAACCATAGTACGGACGGGCAG-ACCAGGACGACCAAGG---AAGCAGTATCATATGCTCAATGCGATACTGGCAGCAGACGTACAAGTTCCACAAAACTACGCACAAGCTGAACGGTCTACTGAAGGCG-AGATATGGAAAGCATCAATGAAGGACGA-GTACGAATCTCTCGTGAAGAACGGCACGTGGTCGCTTACTAAATTGCCTAGCGGGAAAAAGTCCATTGGATGCAAATGGGTTTACGC--------AGTTAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GT...................................................................................................	22	13	0.62	8	0	6	0	0	0	2
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GTA..................................................................................................	23	13	0.46	6	0	5	0	0	0	1
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GTAC.................................................................................................	24	13	0.46	6	0	2	0	0	0	4
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-G....................................................................................................	21	13	0.38	5	0	0	0	0	0	5
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GTACGA...............................................................................................	26	12	0.33	4	0	2	0	0	0	2
...........................................................................................................................................................................ATGAAGGACGA-GTACGAATCTCTC........................................................................................	24	12	0.25	3	0	0	0	0	0	3
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGG...............................................	21	14	0.21	3	0	3	0	0	0	0
.....................................................................................................................................................................................................TGAAGAACGGCACGTGGTC....................................................................	19	14	0.14	2	0	0	0	0	0	2
...................................................................................................................................................................................................................................TGCCTAGCGGGAAAAAGTCCATTGG................................	25	14	0.14	2	0	0	0	0	0	2
...............................................................................................................................ACAAGCTGAACGGTCTACTGAAGG.....................................................................................................................................	24	14	0.14	2	0	2	0	0	0	0
..............................................................................................................................................................................................................................TAAATTGCCTAGCGGGAAAAAGTCCA....................................	26	14	0.14	2	0	0	0	0	0	2
......................................................................................................................................GAACGGTCTACTGAAGGCG-AG................................................................................................................................	21	15	0.13	2	0	1	0	1	0	0
.........................................................................................................................................................................................................................................GCGGGAAAAAGTCCATTGGA...............................	20	15	0.13	2	0	0	0	0	0	2
.....................................................CGACCAAGG---AAGCAGTATT.................................................................................................................................................................................................................	19	15	0.13	2	0	0	0	0	0	2
..............................................................................................................................CACAAGCTGAACGGTCTACTGAAG......................................................................................................................................	24	16	0.13	2	0	2	0	0	0	0
.....................................................................................................................................................................GCATCAATGAAGGACGA-GTACGAA..............................................................................................	24	11	0.09	1	0	1	0	0	0	0
......................................................................................................................................................................CATCAATGAAGGACGA-GTACGAATCT...........................................................................................	26	11	0.09	1	0	1	0	0	0	0
..........................................................................................................................................................................AATGAAGGACGA-GTACGAA..............................................................................................	19	12	0.08	1	0	1	0	0	0	0
..............................................................................................................................................................................AAGGACGA-GTACGAATCTCTCG.......................................................................................	22	12	0.08	1	0	0	0	1	0	0
.................................................................................................................................................................GAAAGCATCAATGAAGGACGA-GTACG................................................................................................	26	13	0.08	1	0	0	0	0	0	1
................................................................................................................................................................GGAAAGCATCAATGAAGGACGA-.....................................................................................................	22	13	0.08	1	1	0	0	0	0	0
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GTACG................................................................................................	25	13	0.08	1	0	0	0	0	0	1
...............................................................................................................................................................TGGAAAGCATCAATGAAGGAC........................................................................................................	21	13	0.08	1	0	1	0	0	0	0
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GTAA.................................................................................................	24	13	0.08	1	0	1	0	0	0	0
..................................................................................................................................................................AAAGCATCAATGAAGGACGA-GA...................................................................................................	22	13	0.08	1	0	0	1	0	0	0
....................................................................................................................................................................AGCATCAATGAAGGACGA-GT...................................................................................................	20	13	0.08	1	0	0	0	0	1	0
..................................................................................................................................................................AAAGCATCAATGAAGGAA........................................................................................................	18	13	0.08	1	0	1	0	0	0	0
.....................................................CGACCAAGG---AAGCAGTATCATATGCT..........................................................................................................................................................................................................	26	14	0.07	1	0	1	0	0	0	0
......................................................................................................................................................................................................GAAGAACGGCACGTGGTCGCT.................................................................	21	14	0.07	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGG..............................................	23	14	0.07	1	0	1	0	0	0	0
................................................................................................................................................................................................................................AATTGCCTAGCGGGAAAAAGT.......................................	21	14	0.07	1	0	0	0	0	0	1
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGGAA............................................	24	14	0.07	1	0	1	0	0	0	0
..............................................................................................................................................................................................TCTCTCGTGAAGAACGGCACGTGG......................................................................	24	14	0.07	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................CTAGCGGGAAAAAGTCCATTGG................................	22	14	0.07	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................CGCTTACTAAATTGCCTAGCGGGA.............................................	24	14	0.07	1	0	1	0	0	0	0
....................................................................................................................................................................................................GTGAAGAACGGCACGTGGTCG...................................................................	21	14	0.07	1	0	0	0	0	0	1
...............................................................................................................................ACAAGCTGAACGGTCTACTGAAGGC....................................................................................................................................	25	14	0.07	1	0	1	0	0	0	0
........................................................................................................................................................................................................................GCTTACTAAATTGCCTAGCGGGA.............................................	23	14	0.07	1	0	1	0	0	0	0
...............................................................................................................................................................................................CTCTCGTGAAGAACGGCA...........................................................................	18	14	0.07	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................GCCTAGCGGGAAAAAGTCCATTGG................................	24	14	0.07	1	0	0	0	0	0	1
.........................................................................................................................................................................................................................CTTACTAAATTGCCTAGCGGGAC............................................	23	14	0.07	1	0	1	0	0	0	0
..........................................................................................................................................GGTCTACTGAAGGCG-AGATAT............................................................................................................................	21	15	0.07	1	0	0	0	0	0	1
.........................................................................TCATATGCTCAATGCGATACTGG............................................................................................................................................................................................	23	15	0.07	1	0	1	0	0	0	0
................................................................................................CAGCAGACGTACAAGTTCCAC.......................................................................................................................................................................	21	15	0.07	1	0	1	0	0	0	0
.................................................................................................................................................TGAAGGCG-AGATATGGAA........................................................................................................................	18	15	0.07	1	0	1	0	0	0	0
...........................................................................ATATGCTCAATGCGATACTG.............................................................................................................................................................................................	20	15	0.07	1	0	1	0	0	0	0
...............................................................................GCTCAATGCGATACTGGCAGCAGACG...................................................................................................................................................................................	26	15	0.07	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................AGCGGGAAAAAGTCCATTGGATGC............................	24	15	0.07	1	0	1	0	0	0	0
.....................................................................................................................................TGAACGGTCTACTGAAGGC....................................................................................................................................	19	15	0.07	1	0	0	0	0	0	1
..................................................................................................................................................GAAGGCG-AGATATGGAAA.......................................................................................................................	18	15	0.07	1	0	0	0	0	0	1
..........................................................................................................................................GGTCTACTGAAGGCG-AGAA..............................................................................................................................	19	15	0.07	1	0	0	0	0	0	1
............................................................................TATGCTCAATGCGATACTGGCAGC........................................................................................................................................................................................	24	15	0.07	1	0	1	0	0	0	0
...............................................................................................................................ACAAGCTGAACGGTCTACTGAAG......................................................................................................................................	23	16	0.06	1	0	1	0	0	0	0
..............................................................................................................................CACAAGCTGAACGGTCTACTGAA.......................................................................................................................................	23	16	0.06	1	0	1	0	0	0	0
...................................................................................................................................................................................................................TGGTCGCTTACTAAATTGCC.....................................................	20	16	0.06	1	0	1	0	0	0	0
...............................................................................................................................ACAAGCTGAACGGTCTACTGAAA......................................................................................................................................	23	16	0.06	1	0	1	0	0	0	0
..............................................................................TGCTCAATGCGATACTGGCAGCAGAA....................................................................................................................................................................................	26	16	0.06	1	0	1	0	0	0	0
...............................................................................................................................ACAAGCTGAACGGTCTACTG.........................................................................................................................................	20	16	0.06	1	0	1	0	0	0	0
.............CAGGA-CGCCCAACCATAGTACGGAC.....................................................................................................................................................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
.................A-CGCCCAACCATAGTACGGACGGG..................................................................................................................................................................................................................................................	24	17	0.06	1	0	1	0	0	0	0
.................A-CGCCCAACCATAGTACGGAC.....................................................................................................................................................................................................................................................	21	17	0.06	1	0	1	0	0	0	0
.............CAGGA-CGCCCAACCATAGTACGGACGG...................................................................................................................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0
........................AACCATAGTACGGACGGGCA................................................................................................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0	0
.................A-CGCCCAACCATAGTACGGACGG...................................................................................................................................................................................................................................................	23	17	0.06	1	0	1	0	0	0	0

droWil2

AGG--------ACCAGGG-CGTTCAAAAGTTATAAGAACGGGTAA-ACCAGGTAGACCTCGA---AAGCAGTATAATATGTTGAATATGCTAAATGTAGAAAAGGTAAAAGTTCCATTAGGAGTTAACGAAGCCATTAATGGCGAAATGGGCA-GCGAATGGATAGCATCAATGCAAAAGGA-GATAGATGCACTGAAGGCAAACAATACTTGGGAATTGGTAGAATTACCTGAGGGTAAGAAAGCTATTGGCTGTAAGTGGGTTTTTGC--------GATTAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................................................................................................................................................................................AAGAAAGCTATTGGCTGTAAGTGGG.....................	25	8	0.13	1	0	1	0	0	0
.............................................................................................................................................................................................................................................TAAGAAAGCTATTGGCTGTAAGTGG......................	25	8	0.13	1	0	1	0	0	0
........................................................................................................................................................................................................................................................TTGGCTGTAAGTGGGTTTTTG...............	21	8	0.13	1	0	1	0	0	0
....................................................TAGACCTCGA---AAGCAGTATAAT...............................................................................................................................................................................................................	22	8	0.13	1	0	0	0	1	0
....................................................................CAGTATAATATGTTGAATAT....................................................................................................................................................................................................	20	9	0.11	1	0	0	0	1	0
....................................................................CAGTATAATATGTTGAATATGCT.................................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0
....................................................................CAGTATAATATGTTGAATATGCTAAA..............................................................................................................................................................................................	26	9	0.11	1	0	0	0	1	0
..............................................ACCAGGTAGACCTCGA---AAGCAG.....................................................................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0
.................................................................................................AGAAAAGGTAAAAGTTCCATTAGGAGT................................................................................................................................................................	27	10	0.10	1	0	1	0	0	0
...........................................................................................................................................................CGAATGGATAGCATCAATGCAAAAGG.......................................................................................................	26	10	0.10	1	0	1	0	0	0
..............................................................................................................................................................ATGGATAGCATCAATGCAAAAGGA-GAT..................................................................................................	27	10	0.10	1	0	1	0	0	0
.............................TTATAAGAACGGGTAA-ACCAGG........................................................................................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0
...................................GAACGGGTAA-ACCAGGTAGACCTC................................................................................................................................................................................................................................	24	10	0.10	1	0	1	0	0	0
...............................................................................................................................................................TGGATAGCATCAATGCAAAAGGA-GA...................................................................................................	25	10	0.10	1	0	1	0	0	0
....................................................................................................AAAGGTAAAAGTTCCATTAGGA..................................................................................................................................................................	22	11	0.09	1	0	1	0	0	0
...........................................AA-ACCAGGTAGACCTCGA---AAGC.......................................................................................................................................................................................................................	22	11	0.09	1	0	1	0	0	0
.......................................................................................................................................................................................................................AATTGGTAGAATTACCTGAGGGTT.............................................	24	11	0.09	1	0	0	1	0	0
..............................................................................................................................................................................................................ATACTTGGGAATTGGTAGAATTAC......................................................	24	11	0.09	1	0	0	1	0	0
....................................................................................................AAAGGTAAAAGTTCCATTAGGAGT................................................................................................................................................................	24	11	0.09	1	0	1	0	0	0
....................................................................................................................TTAGGAGTTAACGAAGCCATTAATGG..............................................................................................................................................	26	11	0.09	1	0	0	0	1	0
..............................................................................................................................................................................................................ATACTTGGGAATTGGTAGAATTACC.....................................................	25	11	0.09	1	0	1	0	0	0
................................................................................................................................GAAGCCATTAATGGCGAAATGG......................................................................................................................................	22	11	0.09	1	0	1	0	0	0
........................................................................................................................................................................................................................ATTGGTAGAATTACCTGAGGGTAA............................................	24	11	0.09	1	0	0	0	1	0
.........................................................................................................................................................................................................................TTGGTAGAATTACCTGAGGGTAAGAA.........................................	26	11	0.09	1	0	1	0	0	0
........................................................................................................................................................................................................................ATTGGTAGAATTACCTGAGGGTAAGA..........................................	26	11	0.09	1	0	1	0	0	0
........................................................................................................................................................................................................................ATTGGTAGAATTACCTGAGGGTAAA...........................................	25	11	0.09	1	0	1	0	0	0
...............................................................................................................................................................................................................TACTTGGGAATTGGTAGAATTACC.....................................................	24	12	0.08	1	0	1	0	0	0
............................................................................................................................................................................TGCAAAAGGA-GATAGATGCACTGA.......................................................................................	24	12	0.08	1	0	1	0	0	0
...........................................................................................................................................................................................................................GGTAGAATTACCTGAGGGTAAGAAAGC......................................	27	13	0.08	1	1	0	0	0	0

droVir3

AAG-CTCGTGGTTCAGGG-CGTCCACGAAAGATAAAAACTGGAAA-ACCAGGTAGACCCCGC---AAGCAGTATAATTGCCTGAATATGCTGAAGGCAGAGGAAATCGTCATTCCTGAAAGTTTTAGCGAAGCAAATGAGTCAGAAATGAGCC-AAGAATGGTCAGCATCGATTCAGAAGGA-GATAAAAGCACTTGAAGACAATAAGACTTGGGAGCTTGTGGAATTGCCAGCGAATAAGAAAGCGATAGGCTGCAAATGGGTCTTTGG--------CATAAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGC..................................................................	22	4	11.00	44	3	0	9	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	5	5	4	4	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGC....................................................................................................................................	23	5	10.60	53	0	0	6	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	5	4	9	9	3	2	2	0	0	0	0	2	3	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTT................................................................	24	4	6.50	26	10	0	2	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTGT..............................................................	26	4	5.50	22	0	0	1	0	1	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	0	1	1	0	0	0	0	0	0	1	0	2	0	0	1	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTG...............................................................	25	4	4.50	18	0	0	6	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-..................................................................................................................................	24	5	4.00	20	0	0	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	2	1	2	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCT.................................................................	23	4	2.75	11	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................CGAAGCAAATGAGTCAGAAATGAGC....................................................................................................................................	25	5	2.40	12	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-A.................................................................................................................................	25	5	2.20	11	0	0	1	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAG.....................................................................................................................................	22	5	2.00	10	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AAAACTGGAAA-ACCAGGTAGACCCCGC---...........................................................................................................................................................................................................................	27	4	2.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
.....................................................................................................................................................................................................................................CCAGCGAATAAGAAAGCGATAGG................................	23	4	1.75	7	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AAG...............................................................................................................................	27	5	1.20	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................AAACTGGAAA-ACCAGGTAGACCCCGC---...........................................................................................................................................................................................................................	26	4	1.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.................................................................AAGCAGTATAATTGCCTGAATATGCT.................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................CATTCCTGAAAGTTTTAGCGAAG........................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AA................................................................................................................................	26	5	1.00	5	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CCAGCGAATAAGAAAGCGATAGGCTGC............................	27	4	1.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GAAATCGTCATTCCTGAAAGTTT................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAG...................................................................	21	4	1.00	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGATTCAGAAGGA-GATAAAAGCACT.........................................................................................	25	6	0.83	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................CGAAGCAAATGAGTCAGAAATGAGCC-..................................................................................................................................	26	5	0.80	4	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................CGAAGCAAATGAGTCAGAAATGAGCC-A.................................................................................................................................	27	5	0.80	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................CGAAGCAAATGAGTCAGAAATGAG.....................................................................................................................................	24	5	0.80	4	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTT...............................................................	25	4	0.75	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGA....................................................................	20	4	0.75	3	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CCAGCGAATAAGAAAGCGATAGGC...............................	24	4	0.75	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GAAAGATAAAAACTGGAAA-ACCAGGT.......................................................................................................................................................................................................................................	26	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................AAGGA-GATAAAAGCACTTGAAGAC..................................................................................	24	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCGATTCAGAAGGA-GATAAAAGC............................................................................................	23	6	0.67	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGA......................................................................................................................................	21	5	0.60	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATG.......................................................................................................................................	20	5	0.60	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGCAGAGGAAATCGTCATTCCTG.......................................................................................................................................................................	23	7	0.57	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGG.....................................................................	19	4	0.50	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGATTCAGAAGGA-GATAAAAGCAC..........................................................................................	24	6	0.50	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CAGCGAATAAGAAAGCGATAGGCTGC............................	26	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AAAACTGGAAA-ACCAGGTAGACCC.................................................................................................................................................................................................................................	24	4	0.50	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGCAGAGGAAATCGTCATTCCTGATC....................................................................................................................................................................	26	7	0.43	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
..............................................................................................GGCAGAGGAAATCGTCATTCCTGA......................................................................................................................................................................	24	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCAGCATCGATTCAGAAGGA-GA...................................................................................................	22	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-T.................................................................................................................................	25	5	0.40	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGTAGACCCCGC---AAGC.......................................................................................................................................................................................................................	22	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AT................................................................................................................................	26	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................TCAGCATCGATTCAGAAGGA-GATA.................................................................................................	24	5	0.40	2	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AG................................................................................................................................	26	5	0.40	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AAGA..............................................................................................................................	28	5	0.40	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCA-..................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAGACAATAAGACTTGGGAGC..................................................................	21	8	0.38	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................AATTGCCTGAATATGCTGAAGGC...........................................................................................................................................................................................	23	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AGCACTTGAAGACAATAAGACTTGGG.....................................................................	26	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GA-GATAAAAGCACTTGAAGAC..................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGCAGAGGAAATCGTCATTCCTGAA.....................................................................................................................................................................	25	7	0.29	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTAA..............................................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAGACAATAAGACTTGGGAGCTT................................................................	23	8	0.25	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTGTG.............................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TTGCCAGCGAATAAGAAAGCGATAGGC...............................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CCAGCGAATAAGAAAGCGATAGGCTTGT...........................	28	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................ACCAGGTAGACCCCGC---AAGCAGTATAA................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AAAACTGGAAA-ACCAGGTAGACCCC................................................................................................................................................................................................................................	25	4	0.25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................AAACTGGAAA-ACCAGGTAGACC..................................................................................................................................................................................................................................	22	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................TTCAGAAGGA-GATAAAAGCACTTGT......................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................AAACTGGAAA-ACCAGGTAGACCCC................................................................................................................................................................................................................................	24	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAGCTTGTC.............................................................	27	4	0.25	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................TTCAGAAGGA-GATAAAAGCACTTGA......................................................................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TGTGGAATTGCCAGCGAATAAGAAAGCGA....................................	29	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................AAACTGGAAA-ACCAGGTAGACCCCG...............................................................................................................................................................................................................................	25	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................AAACTGGAAA-ACCAGGTAGACCC.................................................................................................................................................................................................................................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................GTGGAATTGCCAGCGAATAAGAAAG.......................................	25	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CGAATAAGAAAGCGATAGGCTGC............................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CCAGCGAATAAGAAAGCGATAG.................................	22	4	0.25	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CAGCGAATAAGAAAGCGATAGG................................	22	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................AAACTGGAAA-ACCAGGTAGACCCCGC---A..........................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................GAAAGCGATAGGCTGCAAATGGG.....................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGCTTGTGGAATTGCCAGCGAATAAG...........................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAAGACAATAAGACTTGGGAA...................................................................	21	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TTAGCGAAGCAAATGAGTCAGAAATGA......................................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................AAATGAGTCAGAAATGAGCC-A.................................................................................................................................	21	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................AAATGAGTCAGAAATGAGCC-AAGA..............................................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...............................................................................................................................CGAAGCAAATGAGTCAGAAATGA......................................................................................................................................	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AAA...............................................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGTAGACCCCGC---AAGCA......................................................................................................................................................................................................................	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................AGCAAATGAGTCAGAAATGAGCC-..................................................................................................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-TGT...............................................................................................................................	27	5	0.20	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................TGGTCAGCATCGATTCAGAAGGA-GATA.................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TTGCCAGCGAATAAGAAAGCGATTC.................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
................................................................................................................................................................GGTCAGCATCGATTCAGAAGGA-GATAA................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TTAGCGAAGCAAATGAGTCAG............................................................................................................................................	21	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................AAGCAAATGAGTCAGAAATGAGCC-AAGT..............................................................................................................................	28	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................AAATGAGTCAGAAATGAGCC-..................................................................................................................................	20	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGTAGACCCCGC---AAGCAGTAT..................................................................................................................................................................................................................	27	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGTAGACCCCGC---AAGCAGT....................................................................................................................................................................................................................	25	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................ACCAGGTAGACCCCGC---AAGCAG.....................................................................................................................................................................................................................	22	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGACTTGGGAGCTTGT..............................................................	18	10	0.20	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGATTCAGAAGGA-GATAAAAGC............................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGCTTGTGGAATTGCCAGCGAATT.............................................	24	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCGATTCAGAAGGA-GATAAAAGCAT..........................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGACTTGGGAGCTTGTGGAATTGC......................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AATATGCTGAAGGCAGAGGAAATCG................................................................................................................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ATATGCTGAAGGCAGAGGAAATT.................................................................................................................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CTGCAAATGGGTCTTTGG--------CAT...	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TTGGGAGCTTGTGGAATTGCCAGC..................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GCTTGTGGAATTGCCAGCGAAT..............................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CTGCAAATGGGTCTTTGG--------CATC..	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................CTTGGGAGCTTGTGGAATTGC......................................................	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................CATCGATTCAGAAGGA-GAT..................................................................................................	19	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGATTCAGAAGGA-GATAAAAGCA...........................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................CGATTCAGAAGGA-GATAAAAG.............................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGCTTGTGGAATTGCCAGC..................................................	19	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ATATGCTGAAGGCAGAGGAAATCG................................................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ATATGCTGAAGGCAGAGGAAATCGT...............................................................................................................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ATATGCTGAAGGCAGAGGAAATC.................................................................................................................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................AGCTTGTGGAATTGCCAGCGA................................................	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGACTTGGGAGCTTGTGGAATTGC......................................................	24	6	0.17	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCGATTCAGAAGGA-GATAAAAG.............................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................TTCAGAAGGA-GATAAAAGCACTT........................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................TTCAGAAGGA-GATAAAAGC............................................................................................	19	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................AGGCTGCAAATGGGTCTTTGG--------......	21	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCGATTCAGAAGGA-GATAAAAGCA...........................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ATATGCTGAAGGCAGAGGAAAT..................................................................................................................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGGGAGCTTGTGGAATTGCCA....................................................	21	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................TCGATTCAGAAGGA-GATAAAAGCAC..........................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGCAGAGGAAATCGTCATTC..........................................................................................................................................................................	21	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGCAGAGGAAATCGTCATTCC.........................................................................................................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AA-ACCAGGTAGACCCCGC---...........................................................................................................................................................................................................................	18	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGCAGAGGAAATCGTCATTCC.........................................................................................................................................................................	22	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................ACTTGGGAGCTTGTGGAATTG.......................................................	21	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................AAGGCAGAGGAAATCGTCATTCC.........................................................................................................................................................................	23	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GCAGAGGAAATCGTCATTC..........................................................................................................................................................................	19	7	0.14	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGCAGAGGAAATCGTCATTCCTGAAA....................................................................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAGACAATAAGACTTGGGAGCT.................................................................	22	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AGACAATAAGACTTGGGAG...................................................................	19	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................ACAATAAGACTTGGGAGCTTG...............................................................	21	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AAGACAATAAGACTTGGGAG...................................................................	20	8	0.13	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AATAAGACTTGGGAGCTTGTGT............................................................	22	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AGG--------TCCAGGG-AGACCACGAATTGTTCGCACTGGGCG-TACAGGTCGTCCACGA---AAAGAGTACAATGTTCTGAATGTACTGGATGCTCGAAATGCTGTTGTTCCCACATGTGTTAGGGATGCATTTCAGTCAGAGCAATCTG-AAAACTGGAGATCGGCGATGCAGAAGGA-GTATGATAGCCTGAAGAACACTGAGACATGGAGTCTGGTCGATCTTCCAGCAGGCGAAAAAGCTATTGGTTGTAAATGGGTTTTTAC--------TACCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTGG...............................................................	22	11	3.45	38	22	1	0	0	15	0
........................................................................................................................................................................................................................................................TTGGTTGTAAATGGGTTTTTAC--------TAC...	25	1	1.00	1	1	0	0	0	0	0
.......................................................................................................TGCTGTTGTTCCCACATGTGTTAGGGA..........................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
.................................................................AAAGAGTACAATGTTCTGAATGTAC..................................................................................................................................................................................................	25	16	0.69	11	8	0	0	0	3	0
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTGGT..............................................................	23	11	0.64	7	5	0	0	0	2	0
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTGGTC.............................................................	24	11	0.45	5	5	0	0	0	0	0
.................................................................AAAGAGTACAATGTTCTGAATGT....................................................................................................................................................................................................	23	16	0.31	5	4	1	0	0	0	0
.................................................................AAAGAGTACAATGTTCTGAATGTA...................................................................................................................................................................................................	24	16	0.31	5	3	2	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATTTC..................................................................................................................................................	22	13	0.31	4	2	0	0	0	0	2
....................................................................................................................ACATGTGTTAGGGATGCATTTCAGTC..............................................................................................................................................	26	13	0.31	4	0	0	0	0	1	3
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTGGTCG............................................................	25	11	0.27	3	3	0	0	0	0	0
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTG................................................................	21	11	0.27	3	3	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATTTCAG................................................................................................................................................	24	13	0.23	3	2	0	0	0	0	1
....................................................................................................................ACATGTGTTAGGGATGCATTTCAGT...............................................................................................................................................	25	13	0.23	3	3	0	0	0	0	0
.................................................................AAAGAGTACAATGTTCTGAATG.....................................................................................................................................................................................................	22	16	0.19	3	3	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATTTCAGC...............................................................................................................................................	25	13	0.15	2	2	0	0	0	0	0
.................................................................AAAGAGTACAATGTTCTGAATGTACT.................................................................................................................................................................................................	26	16	0.13	2	2	0	0	0	0	0
..........................................................................................................................................................................................................ACTGAGACATGGAGTCTGGTCGATCT........................................................	26	11	0.09	1	0	0	0	0	1	0
.......................................................................................................................................................................................................AACACTGAGACATGGAGTCTGGTCGATC.........................................................	28	11	0.09	1	0	0	0	0	1	0
........................................................................................................................................................................................................ACACTGAGACATGGAGTCTGG...............................................................	21	11	0.09	1	1	0	0	0	0	0
..............................................................................................................................................................................................AGCCTGAAGAACACTGAGACATGGAG....................................................................	26	11	0.09	1	1	0	0	0	0	0
............................ATTGTTCGCACTGGGCG-TACAGG........................................................................................................................................................................................................................................	23	13	0.08	1	1	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCAT.....................................................................................................................................................	19	13	0.08	1	1	0	0	0	0	0
.....................................................................................................................CATGTGTTAGGGATGCATTTC..................................................................................................................................................	21	13	0.08	1	1	0	0	0	0	0
............................ATTGTTCGCACTGGGCG-TACA..........................................................................................................................................................................................................................................	21	13	0.08	1	1	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATT....................................................................................................................................................	20	13	0.08	1	1	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATTTCA.................................................................................................................................................	23	13	0.08	1	1	0	0	0	0	0
....................................................................................................................ACATGTGTTAGGGATGCATTTCAGTCA.............................................................................................................................................	27	13	0.08	1	1	0	0	0	0	0
..............AGGG-AGACCACGAATTGTTCGCACTGGG.................................................................................................................................................................................................................................................	28	14	0.07	1	1	0	0	0	0	0
.....................................................................................................................................................TCTG-AAAACTGGAGATCGGCG.................................................................................................................	21	15	0.07	1	1	0	0	0	0	0
.........................................................................................................................................................................CGATGCAGAAGGA-GTATGATAGC...........................................................................................	23	15	0.07	1	0	0	0	0	1	0
.........................................................................................................................................................................CGATGCAGAAGGA-GTATGATAG............................................................................................	22	15	0.07	1	1	0	0	0	0	0
.................................................................................................................................................................................AAGGA-GTATGATAGCCTGAAGAACAC................................................................................	26	15	0.07	1	1	0	0	0	0	0
...........................................................................ATGTTCTGAATGTACTGGATGC...........................................................................................................................................................................................	22	15	0.07	1	1	0	0	0	0	0
............................................................................................................................................TCAGAGCAATCTG-AAAACTGGAGATCGG...................................................................................................................	28	15	0.07	1	1	0	0	0	0	0
.....................................................................................................................................................TCTG-AAAACTGGAGATCGGCGATG..............................................................................................................	24	15	0.07	1	0	0	0	0	0	1
............................................................................................................................................................................TGCAGAAGGA-GTATGATAGCCTGA.......................................................................................	24	15	0.07	1	1	0	0	0	0	0
.................................................................AAAGAGTACAATGTTCTGAATGTACCCC...............................................................................................................................................................................................	28	16	0.06	1	1	0	0	0	0	0
....................................................................GAGTACAATGTTCTGAATGTAC..................................................................................................................................................................................................	22	16	0.06	1	1	0	0	0	0	0

droGri2

AGG--------TCCTGGG-AGGCCAAAGAAAGTACGCACCGGGCA-GCCAGGACGCCCTCGA---AAGCAGTACAACATTTTGAATGTTATGACAACGGATGACGTAGCTGCACCT----GCGTCAATGCGGCCTTGAGTTCTGATCATGCCA-GGGAGTGGAGGGCATCGATGCAGAAGGA-GATAGACAGTCTAAAAGGAAACAAAACTTGGGAGTTGGTTGATCTACCGAAGGGAGAGAAGGCAATTGGCTGTAAATGGGTATTTGC--------AGTGAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
............................AAAGTACGCACCGGGCA-GCCAGGA.......................................................................................................................................................................................................................................	24	16	0.13	2	0	2
..............................................................................................................................................................................................................AAACTTGGGAGTTGGTTGATCTACCGAA..................................................	28	12	0.08	1	0	1

dse_1654

scaffold_93:11078-11228 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-32.7	-32.6	-32.5