ID:

dse_1642

Coordinate:

scaffold_9:2569482-2569644 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.5 -22.4 -22.4

Flybase annnotation

CDS [Dsec\GM16009-cds]; exon [dsec_GLEANR_16803:1]; CDS [Dsec\GM16009-cds]; exon [dsec_GLEANR_16803:2]; intron [Dsec\GM16009-in]

No Repeatable elements found

Sense Strand Reads

--------------------##############################-------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTCTTTTCAAGCTTTCAAAATGGTTTTAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTCTTAGTAACTTATCTGCCAAGTAGCGAGAATCCCAAATTTAGTTTTTATTTAGCATGTCTGCCGTTTTGATTTCGTATTGGATCCAAAAAGTTTGATTGTTTTACATTTTGTTTCATCAAAAACTAATTCCGTACTCCCTAACTGCAGACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAGAGGCAACGCAA
**************************************************((((.((((((((..(((.(((.......))).)))..)))))..........(((((((((....((((.(((.....(((((..(((.....)))..))))).....))))))).................)))))))))...........))).))))..**************************************************
Read size # Mismatch Hit Count Total Norm Total V113
male body
V115
head
M054
female body
.......................GTTTTAACTAGCGAACAGGTGT.......................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0
........................................................................................................................................TTCGTATTGGATCCAAAAAGTTT........................................................................................................ 23 0 1 1.00 1 0 1 0
............................................CCACAGGAATGTAGCTTGCCTC..................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0
............................................CCATAGGAATCTAGCTTGC........................................................................................................................................................................................................ 19 3 7 0.14 1 0 0 1
..................................................GAATGTAGCTTGCCTCTTA.................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1

Anti-sense strand reads

AGAGAAAAGTTCGAAAGTTTTACCAAAATTGATCGCTTGTCCACGGTGTCCATCGATCGAACGGAGAATCATTGAATAGACGGTTCATCGCTCTTAGGGTTTAAATCAAAAATAAATCGTACAGACGGCAAAACTAAAGCATAACCTAGGTTTTTCAAACTAACAAAATGTAAAACAAAGTAGTTTTTGATTAAGGCATGAGGGATTGACGTCTGACTGCGGGTCTGAAACTTCTCGTTCGTGTTCTTCGTCTCCGTTGCGTT
**************************************************((((.((((((((..(((.(((.......))).)))..)))))..........(((((((((....((((.(((.....(((((..(((.....)))..))))).....))))))).................)))))))))...........))).))))..**************************************************
Read size # Mismatch Hit Count Total Norm Total M054
female body
V113
male body
V115
head
....................................................................................................................................................................................AGGTTTTTGATTAAGGAATGAG............................................................. 22 3 1 1.00 1 0 1 0
................................................................................................................................................................................................................................................GTGTTCTTCGTCTCCCGTG.... 19 2 5 0.60 3 3 0 0
................................................................................................................................................................................................................................................GTGTTCCTCGTCTCCCTTG.... 19 2 10 0.50 5 5 0 0
...........................ATTGATCGCGTGTCCACT.......................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1
................................................................................................................................................................................................................................................GTGTTCCTCGTCTCCGGTG.... 19 2 5 0.20 1 1 0 0
...............................................................................................................................................................................................................................................CGTGTTCCTCGTCTCCCTTG.... 20 2 5 0.20 1 1 0 0
...............................................................................................................................................................................................................................................CGTGTTCCTCGTCTCCCGTG.... 20 3 20 0.15 3 3 0 0
................................................................................................................................................................................................................................................GTGTTCCTCGTCTCCCGTGC... 20 3 20 0.10 2 2 0 0
.....................................................................CATTGAAAAGACCGTTGATC.............................................................................................................................................................................. 20 3 13 0.08 1 1 0 0
.............................................................................................................................................................................................................................................TTGGTGTTCCTCGTCTCC........ 18 2 15 0.07 1 1 0 0
...............................................................................................................................................................................................................................................GGTGTTCTTCGTCTCCCGTG.... 20 3 16 0.06 1 1 0 0
................................................................................................................................................................................................................................................GTGTTCCTCGTCTCCCATG.... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_9:2569432-2569694 + dse_1642 TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTTATCTG--------CCAAG-------TAGCGAGA--ATCCC----------A-----AA-T-T-TAG-TTTTTATT------------------TAGCATGTCTGCC-GTTTT---------------------------------------------------GATTTCGTATTGGATCC---------A-AAAAGTTTGATTGT-------------TTTACA--------TTT--TGTTTCATCAAAAACTAATTCCGT-ACTC-------CCTA-ACTGC----------------A----GACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAGAGGCAACGCAA
droSim2 2r:19797875-19798137 + dsi_8341 TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTTATCTG--------CCAAG-------TAGCGAGA--ATCCC----------A-----AA-T-T-TAG-TTTTTATT------------------TAGCATGTCTGCC-GTTTT---------------------------------------------------GATTTCGTATTGGATCC---------A-AACAGTTTGATTGT-------------CTTACA--------TTT--TGTTTCATCAAAAACTAATTCCGT-ACTC-------CCTA-ACTGC----------------A----GACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAGAGGCAACGCAA
dm3 chr2R:19274301-19274567 + TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTAATTTG--------CCAAG-------TAGCGAGT--TTCCC----------A-----AA-T-T-TAG-TTTTGATT------------------TAGCATGTCGGCC-GATTT---------------------------------------------------GATTTCGTATTTGATCC---------A-AACAGTTTGATAGT-------------TTTACA--------TAT--TGTTACATCAATAACTAATTCCGT-ACTC-------CCTA-TCTGG----------------ACTGGGACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAA
droEre2 scaffold_4845:20645182-20645429 + TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACGGGTGCCACAGGTAGCTAGCTTGAGTC----------TTAGCAACTTATACA--------CC------------------------A----------A-----AA-T-T-TGG-TTTTGATT------------------TAGCATGTCTGCC-GATTT---------------------------------------------------GATTTCGTATTGGATGC---------A-AACAGTTTGATAGT-------------CTTAAA--------TGT--TGTCACATTGAAAACTAATTCCGT-ATTC-------CCCA-TCTGC----------------A----GACTGACGCCCAGACGTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAA
droYak3 2R:19245367-19245629 + TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGAGTC----------TTAGTAACTTACCTA--------CCAAG-------TACCGAGT--ACCCC----------A-----AA-T-T-TAG-TTTTGATT------------------TAGCATGTCTGCC-GATTT---------------------------------------------------GATTTTGTATTGGATCC---------A-AACAGTTTGATAGT-------------CTTGAA--------TGT--TGTCACATCAAAAACTAATTCCGT-ATTC-------CGTA-TCTGC----------------A----GACTGACGCCCAGACGTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAA
droEug1 scf7180000409474:378120-378384 - TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAAGTGCCACAGGTAGCTAGCTTTACTCACTG-GAGTGTAATTTCCATATTAT-----------TA-------TTCCAAAA--ACTAT----------A-----AA-T-T-TGGTTTTTACTT------------------TTGCATGGCTCTT-TATAA---------------------------------------------------GATTTTGAATTGGATAA---------T-AATGCATACATACT-------------T---TA--------TGC----CCAAGTCTATATCTAATGTCAT-ATTC-------TTAA-TCAAC----------------A----GACTGACGCTCAGACTTTGAAGTCCAAGCAGAAGAAGCAAAGGCAACGCAA
droBia1 scf7180000301754:3699283-3699555 + TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTCACTCACTT-GAGTGAAAATCACGTATAAA-------GCCATATTAAAAGTACCGA-------------------A-----AA-ATT-TAT-TTTTGATT------------------TTGCATGTCTTCC-GACTT---------------------------------------------------GTTTCTACATTGGATCT---------T-TGTAGTTTAAGGCT-------------CTTTTA--------AGC--TCTTAAATCAAGAACTAACGATTT-TTT--------CCCA-CCCCC----------------A----GGCTGACGTCCAGACTTTGAAGAGCAAACACAAGAAGCAAAGGCAACGCAA
droTak1 scf7180000415882:14377-14647 + TC--T-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTCACTCAGCT-GAGTAAAATTCAC-TATGTA-------CCCAAG-------TAGCAAAT--AGCGA----------A-----AA-T-T-TAGTTTTTCATT------------------TTGCATGTCTACC-GATTT---------------------------------------------------GATTTCGAATTGGATCT---------A-TAGAGTTTAATGAC-------------CTTTTA--------TGA--TCATAAATCCTAAACTAATTCTGT-ATTA-------CCAA-TCCAC----------------A----GACTGACGTCCAGACCTTGAAGACCAAACACAAGAAGCAAAGGCAACGCAA
droEle1 scf7180000491201:1545638-1545904 - TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCTACAGGTAGTTAGCCTCACTTAACC-AAGTTCAAATAA----------------CTAAG-------TATTAAGT--GGCCT----------A-----AATT-T-CAGCTTTCAATT------------------CTGCATGGCTCCC-GATTT---------------------------------------------------GATTTTGAATTGGATTT---------A-TATAGTGTGATGAT-------------CTTACA--------TGT--TGCTAAGTCAAGTACTAATGATGTTATTA-------CTAA-TTCCC----------------A----GACTGACGCCCAGATCTTGAAGACCAAGCACAAGAAGCAAAGGCAACGCAA
droRho1 scf7180000780066:548642-548905 + -CTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTTAATCAATT-CAGTAAAAATAA-------A--------TAAAA-------TATCATAT--AGCCA----------A-----AA-T-T-TGATTTATTATT------------------ATGCATGGCCACC-G-TTT---------------------------------------------------GATTTGGTATTGGATCT---------A-CATATTTTAATGAC-------------CTTATA--------CAT--TTTTTAATCAACTCATAATGATAT-ATGA-------CAAA-TCCCT----------------A----GACTGACGCCCAAATCTTGAAGACCAAACACAAGAAGCAAAGGCAACGCAA
droFic1 scf7180000453809:954039-954321 - T---T-----TTTCAAGCTTG----CAA-AATGGTTT---TAAATAGCGAACAACTGCCACAGGTAGTCAGCCTTACTAACTT-GACTCTAAAAAATTCATTTG--------CTAAG-------TACCAACTACACTGAAAATAAGTACACTTAAAA-T-T-AAG-TGCTTATG------------------TTGCATGTCTTAC-GTTTA---------------------------------------------------TTTTTTAAATTAGATCC---------A-CTTAGTGTGATTTA-------------ATTA-----------TT--TGTTTCAACACAAAATAATGATAT-ATTC-------CTAA-TCTAA----------------A----GACTGACGCCCATACTCGGAAGACTAAGTCCAAGAAGCAAAGACAACGCAA
droKik1 scf7180000302398:259984-260273 + TTTCTCTATATTTCAAGCTTTCTTTCGC-AATGGTTG---TAGCCAGCGAACAGGTGCCACAGGTATCTAGCTAAACACACTT-GAGTCCTATTAACTTTTGTTTGATTTTATCAAG-------TATC----------A----------A-----AA-T-T-TAGACTTAAATT------------------TTGCATGGCTCTTTCAGTT---------------------------------------------------GATACC--------------------T-G---GATTGGTTAT-ATCTTACAAACATTACTGAATCATTAAGCTCTTTTAAATCC-CAATTAATCCCAA-ATTC-------CACC-ACCGC----------------A----GACTGACGGTCAGAGCGCAAAGACCAAGCAAAAGAAGCAAAGGCAACGCAA
droAna3 scaffold_13266:7911677-7911948 + TCTCT-----TTTCAAGCATT----CAG-AATGGTTT---TAATGGGAGAACAGGTGCCACAGGTAGATAGCCTCACTCACTT-CAACCGAA---ACCTATTTA--------TC--------------TAGA--AGTTG----------A-----AA-T-T-TAGACTTTGATT------------------TTGCATGTTT-CT-GATTT---------------------------------------------------GATTAAAAATTGGATACTTTTAAAACCTTC-AACCTTAAACC-------------TTTCCGAATAC----TT--TGGC---CCATGAACTAATTATAT-TCTT-------CGCA-TTCGC----------------A----GACAGTCGGTAAGCCGGCCAAAAATAAGCAAAAGAAGCAAAGGCAACGCAA
droBip1 scf7180000396759:910559-910831 - TCTCT-----TTTCAAGCATT----CAA-AATGGTTT---TAACGGGAGAACAGGTGCCACAGGTAGCTAGCCTCACTCACTT-CAACCGAA---ACCTATTTA--------CA--------------TAGA--AGCTC----------A-----AA-T-T-TAGACTTTGATT------------------TTGCATGTT-CCT-GATTT---------------------------------------------------GATTATACATTGGATATTTATAAAACT----AACTTGAAAGC-------------TTTTCAACTAC---TTT--TGT----TCTATAACTAATAATAT-T---TATTATTCGCT-TTCCC----------------A----GTCAGGCGGTAGGCCGGCCAATAATAAGCACAAGAAGCAAAGGCAACGCAA
dp5 3:9118972-9119207 - TCTCC-----TTGCAAGCTAT----CAA-AATGATTA---AAACGAGCGATCAGGTGTTACAGGTATCAGGCCTTACTCACTT-AAACC--------TTGTTAG--------CA------------CC--GT--AGTGC----------A-----CT-T-G-TAGTCTTTGGTT------------------TTGCATGCCTAAT-GATTT---------------------------------------------------GATTTAAAATTGTATCC---------T-A---GCTTGGTAGTTAT----------CTT--------------------------------AACTAAAC-ACCC-------CACT-CCCAC----------------A----GACCGAGAGTCAGACGACCAGGGCCAAGCAAAAGAAACAGAGGCAACGAAA
droPer2 scaffold_4:4440802-4441037 - TCTCC-----TTGCAAGCTAT----CAA-AATGATTA---TAACGAGCGATCAGGTGTCACAGGTATCAGGCCTTACTCACTA-AAACC--------TTTTTAG--------CA------------CC--GT--AGTGC----------A-----CT-T-G-TAGTCTTTGGTT------------------TTGCATGCCTAAT-GATTT---------------------------------------------------GATTTAAAATTGTATCC---------T-A---GCTTGGTAGTTAT----------CTT--------------------------------AACTAAAC-ACCC-------CACT-CCCAC----------------A----GACCGAGAGTCAGACGACCAGGGCCAAGCAAAAGAAACTGAGGCAACGAAA
droWil2 scf2_1100000004954:2603755-2603981 + TGTCT-----TTTTAAGCCAT----CAATCATGTTTTTGGTATCAAGTGAGCAGGCGACTCAGGTATCTAGACTCAGCAAA--------------ATTAATTAA--------TTAAG-------TTTTGAGT---------------------------------TTTTAGATA------------------TTGCATGTTTTT--AATTTAATTTAATTTCGAAAAATATTTGGCCCACTTATAAAACTTCT-------------------------------------T-------------CAA----------CTT--------------------------------TACTATCT-GTCA-------CACC-C--------------------------------TTTCAGA--ATCAAG-GTAAATCAAAGAAGCAACGCCAACGCAA
droVir3 scaffold_12875:18550000-18550207 + TGTCT-----TTTCAAGCCAA----CAA-AATGGTTA---TGACGGGCGAACAGGTAC-ATATGT----AGCCTCAATAACTT-T---------------TGTACAGTTT--------------------GA--AATAT----------A-----AG-T------TGTTTAATT------------------TGGCATGTTTATC-TAACA---------------------------------------------------AATCT--TACTTGCCCC---------C-AATAAT--------------------------------------------------------------AT-T---CAGTGTGTGCTTTCAACAGAACTCATCGACTTC--------------------TGCAGCGAACAAGCAGAAGAAGCAACGGCTACGCAA
droMoj3 scaffold_6496:12201421-12201654 + TATAT-----TTTCAAGCCAA----CAA-AATGGTTA---TAAAAAGCGAACAGGTAC-ATATGTA----GCCTCATTAACTA-T-----TA----------AACTAGTG-GAA------------AT--GT--ATTAC----------A-----AC-T------TATTTTATTTGGCATTCGTAGTTAGATTGGAAAGCTATT--AGTAA---------------------------------------------------ATTTTCGATATAGCTGT----GCC--T-A---TTACATTAATTAT----------CTT--------------------------------TAC----------------------TCAATAGGGCTCATCGACCTC--------------------TGCAGTTACAAAGCAGAAGAAGCAACGGCAACGCAA
droGri2 scaffold_2746:378-629 + TGTAT-----TTTCAAGCCTT---TCAA-AATGGTTG---TAACCAGTGAACAGGTAT-ATTTGCAGCTTTCCT----AACATAAACTTTCATTGACTTATTTT-A------GT--------------TTGC--AATAG----------A-----AA-T-TGTGA-TTTTTGTT------------------TGGCATGCTCATT-G-CAT--------------------------------------TTTTTCCTGTTTATATTTCCCATTGGCTCC----------------------------------------------------------CTTACATCCAATAATATATTTGT-TGTG-------CAAACTCCACAGGGGTCAACAAGCTT--------------------TCCGGTGTCCAAGCAGAAGAAACAACGCCAACGCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTTATCTG--------CCAAG-------TAGCGAGA--ATCCC----------A-----AA-T-T-TAG-TTTTTATT------------------TAGCATGTCTGCC-GTTTT---------------------------------------------------GATTTCGTATTGGATCC---------A-AAAAGTTTGATTGT-------------TTTACA--------TTT--TGTTTCATCAAAAACTAATTCCGT-ACTC-------CCTA-ACTGC----------------A----GACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAGAGGCAACGCAASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.................................GTTT---TAACTAGCGAACAGGTGT............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.........................................................................................................................................................................................................................................................................TTCGTATTGGATCC---------A-AAAAGTTT............................................................................................................................................................2311.0010001
droSim2
TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTTATCTG--------CCAAG-------TAGCGAGA--ATCCC----------A-----AA-T-T-TAG-TTTTTATT------------------TAGCATGTCTGCC-GTTTT---------------------------------------------------GATTTCGTATTGGATCC---------A-AACAGTTTGATTGT-------------CTTACA--------TTT--TGTTTCATCAAAAACTAATTCCGT-ACTC-------CCTA-ACTGC----------------A----GACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAGAGGCAACGCAASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCCCAGACTTTGAAGAGCAAG.......................2511.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................TA-ACTGC----------------A----GACTGACGCCCAG......................................2111.00100000000000001000
.................................GTTT---TAACTAGCGAACAGGTGC............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
..............................................................................................................................................................T-T-TAG-TTTTTATT------------------TA....................................................................................................................................................................................................................................................................15150.07100000001000000000
dm3
TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGCCTC----------TTAGTAACTAATTTG--------CCAAG-------TAGCGAGT--TTCCC----------A-----AA-T-T-TAG-TTTTGATT------------------TAGCATGTCGGCC-GATTT---------------------------------------------------GATTTCGTATTTGATCC---------A-AACAGTTTGATAGT-------------TTTACA--------TAT--TGTTACATCAATAACTAATTCCGT-ACTC-------CCTA-TCTGG----------------ACTGGGACTGACGCCCAGACTTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCCCAGACTTTGAAGAG...........................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000030000
.................................................................................................................................................................................................AGCATGTCGGCC-GATTT---------------------------------------------------GATTTCGT........................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TATTTGATCC---------A-AACAGTTTGA..........................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................TAG-TTTTGATT------------------TAGCATGTCG............................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GTATTTGATCC---------A-AACAGTTTG...........................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTGATCC---------A-AACAGTTTGAT.........................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................G-TTTTGATT------------------TAGCATGTCGGC..........................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCCAGACTTTGAAGAGC..........................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTGAAGAGCAAGCACA...................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T-T-TAG-TTTTGATT------------------TAGCATGTCGGC..........................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TTTTGATT------------------TAGCATGTCGGCC-........................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................T---TAACTAGCGAACAGGTGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGACTTTGAAGAGCAG........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGACTTTGAAGAGC..........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................T-T-TAG-TTTTGATT------------------TAGCATGT..............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCCAGACTTTGAAGAGCAAGC......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CC---------A-AACAGTTTGATAGT-------------TT.......................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................AAG-------TAGCGAGT--TTCCC----------A-----AA-T-T-....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TA-TCTGG----------------ACTGGGACTGACGC..........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTGAAGAGCAAGCACAAGAAGC.............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACGCCCAGACTTTGAAG.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGAAGCAAAGGCAACGC..2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCAGACTTTGAAGAGCAA........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAGACTTTGAAGAGCAAG.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TGATCC---------A-AACAGTTTGATAGT-------------.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTGAAGAGCAAGCACAAG.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................ACTAATTTG--------CCAAG-------TAGCGAG...................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTCGTATTTGATCC---------A-AACAGT..............................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACGCCCAGACTTTGAAGAGCAAG.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AA-T-T-TAG-TTTTGATT------------------TAGCATGTCGGCC-........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................TTTGATT------------------TAGCATGTCGGCC-GT......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGAAGAGCAAGCACAAGAAGC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGCACAAGAAGCAAAGG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCCAGACTTTGAAGAGCA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCACAAGAAGCAAAGGCAACGCAA2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGAAGAGCAAGCACAAGAAGA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAAGCACAAGAAGCA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CATGTCGGCC-GATTT---------------------------------------------------GATTTC..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGAGCAAGCACAAGAAG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGG----------------ACTGGGACTGACGCC.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGACTTTGAAGAGC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................AATGGTTT---TAACTAGCGAACA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGAGCAAGCACAAGAAGCAA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTGACGCCCAGACTTTGAAGAG...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTGATCC---------A-AACAGTTTGATAGT-------------TT.......................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TGATAGT-------------TTTACA--------TAT--TGT...................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGAAGAGCAAGCACAAG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTGAAGAGCAAGCA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACGCCCAGACTTTGAAGAGC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTA-TCTGG----------------ACTGGGACTGACG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGAGCAAGCACAAGAAG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................TTT---TAACTAGCGAACAGGTGC............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGACTGACGCCCAG......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAGCAAGCACAAGA................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TCGTATTTGATCC---------A-AACAGTTTGATAGT-------------.........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................TCGTATTTGATCC---------A-AACAGTT.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAGACTTTGAAGAGCAAGCACAAGAAG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGTTT---TAACTAGCGAACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAAGCACAAGAAGCAAAC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGAGCAAGCACAAG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ATTCCGT-ACTC-------CCTA-TCTGG----------------A.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................T---TAACTAGCGAACAGGTGCCAC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGG----------------ACTGGGACTGACGCCCAG......................................2111.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTGATCC---------A-AACAGTTTGATAG.......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTGACGCCCAGACTTTGAA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CCAGACTTTGAAGAGCAAG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGAGCAAGCACAAGA................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TTTGATT------------------TAGCATGTCGGCC-GA......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................ATGTCGGCC-GATTT---------------------------------------------------GATTTCGT........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCCCAGACTTTGAAGAGCAAG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AACTAATTCCGT-ACTC-------CCTA-TCTGG----------------AC......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................A-AATGGTTT---TAACTAGCGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................TTGATCC---------A-AACAGTTTGATAG.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TA-TCTGG----------------ACTGGGACTGACG...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACGCCCAGACTTTGAAGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ATTTG--------CCAAG-------TAGCGAGT--................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GCATGTCGGCC-GATTT---------------------------------------------------GATTT...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GTAGCTAGCTTGCCTC----------TTAGT........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGG----------------ACTGGGACTGACGCCCA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................CTC-------CCTA-TCTGG----------------ACTGGGACT...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACGCCCAGACTTTGAAGAG...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAAGAGCAAGCACAAGAAGCA............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACGCCCAGACTTTGAAGAG...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAGACTTTGAAGAGCAAGC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACGCCCAGACTTTGAAGAGCA.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................GGCC-GATTT---------------------------------------------------GATTTCGTATTTT...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................CTAATTTG--------CCAAG-------TAGCGAGT--................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAGACTTTGAAGAGCAAGCACAAGAAGC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TAGCGAACAGGTGCCACAGGTAGCTAGC..............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................T-ACTC-------CCTA-TCTGG----------------ACTGGGA.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................TAGCGAACAGGTGCCACAGGTAGCTA................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACGGGTGCCACAGGTAGCTAGCTTGAGTC----------TTAGCAACTTATACA--------CC------------------------A----------A-----AA-T-T-TGG-TTTTGATT------------------TAGCATGTCTGCC-GATTT---------------------------------------------------GATTTCGTATTGGATGC---------A-AACAGTTTGATAGT-------------CTTAAA--------TGT--TGTCACATTGAAAACTAATTCCGT-ATTC-------CCCA-TCTGC----------------A----GACTGACGCCCAGACGTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..........................................................CACAGGTAGCTAGCTTGAGTC----------.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACGTTGAAGAGCAAGCA.....................1811.0011000000
droYak3
TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCTTGAGTC----------TTAGTAACTTACCTA--------CCAAG-------TACCGAGT--ACCCC----------A-----AA-T-T-TAG-TTTTGATT------------------TAGCATGTCTGCC-GATTT---------------------------------------------------GATTTTGTATTGGATCC---------A-AACAGTTTGATAGT-------------CTTGAA--------TGT--TGTCACATCAAAAACTAATTCCGT-ATTC-------CGTA-TCTGC----------------A----GACTGACGCCCAGACGTTGAAGAGCAAGCACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGACGCCCAGACGTTGAAGAGCAAG.......................2711.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACGCCCAGACGTT.................................1811.00100010000000
droEug1
TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAAGTGCCACAGGTAGCTAGCTTTACTCACTG-GAGTGTAATTTCCATATTAT-----------TA-------TTCCAAAA--ACTAT----------A-----AA-T-T-TGGTTTTTACTT------------------TTGCATGGCTCTT-TATAA---------------------------------------------------GATTTTGAATTGGATAA---------T-AATGCATACATACT-------------T---TA--------TGC----CCAAGTCTATATCTAATGTCAT-ATTC-------TTAA-TCAAC----------------A----GACTGACGCTCAGACTTTGAAGTCCAAGCAGAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droBia1
TCTCT-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTCACTCACTT-GAGTGAAAATCACGTATAAA-------GCCATATTAAAAGTACCGA-------------------A-----AA-ATT-TAT-TTTTGATT------------------TTGCATGTCTTCC-GACTT---------------------------------------------------GTTTCTACATTGGATCT---------T-TGTAGTTTAAGGCT-------------CTTTTA--------AGC--TCTTAAATCAAGAACTAACGATTT-TTT--------CCCA-CCCCC----------------A----GGCTGACGTCCAGACTTTGAAGAGCAAACACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droTak1
TC--T-----TTTCAAGCTTG----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTCACTCAGCT-GAGTAAAATTCAC-TATGTA-------CCCAAG-------TAGCAAAT--AGCGA----------A-----AA-T-T-TAGTTTTTCATT------------------TTGCATGTCTACC-GATTT---------------------------------------------------GATTTCGAATTGGATCT---------A-TAGAGTTTAATGAC-------------CTTTTA--------TGA--TCATAAATCCTAAACTAATTCTGT-ATTA-------CCAA-TCCAC----------------A----GACTGACGTCCAGACCTTGAAGACCAAACACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droEle1
TCTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCTACAGGTAGTTAGCCTCACTTAACC-AAGTTCAAATAA----------------CTAAG-------TATTAAGT--GGCCT----------A-----AATT-T-CAGCTTTCAATT------------------CTGCATGGCTCCC-GATTT---------------------------------------------------GATTTTGAATTGGATTT---------A-TATAGTGTGATGAT-------------CTTACA--------TGT--TGCTAAGTCAAGTACTAATGATGTTATTA-------CTAA-TTCCC----------------A----GACTGACGCCCAGATCTTGAAGACCAAGCACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droRho1
-CTCT-----TTTCAAGCTTT----CAA-AATGGTTT---TAACTAGCGAACAGGTGCCACAGGTAGCTAGCCTTAATCAATT-CAGTAAAAATAA-------A--------TAAAA-------TATCATAT--AGCCA----------A-----AA-T-T-TGATTTATTATT------------------ATGCATGGCCACC-G-TTT---------------------------------------------------GATTTGGTATTGGATCT---------A-CATATTTTAATGAC-------------CTTATA--------CAT--TTTTTAATCAACTCATAATGATAT-ATGA-------CAAA-TCCCT----------------A----GACTGACGCCCAAATCTTGAAGACCAAACACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droFic1
T---T-----TTTCAAGCTTG----CAA-AATGGTTT---TAAATAGCGAACAACTGCCACAGGTAGTCAGCCTTACTAACTT-GACTCTAAAAAATTCATTTG--------CTAAG-------TACCAACTACACTGAAAATAAGTACACTTAAAA-T-T-AAG-TGCTTATG------------------TTGCATGTCTTAC-GTTTA---------------------------------------------------TTTTTTAAATTAGATCC---------A-CTTAGTGTGATTTA-------------ATTA-----------TT--TGTTTCAACACAAAATAATGATAT-ATTC-------CTAA-TCTAA----------------A----GACTGACGCCCATACTCGGAAGACTAAGTCCAAGAAGCAAAGACAACGCAASizeHit CountTotal NormTotal
No Reads
droKik1
TTTCTCTATATTTCAAGCTTTCTTTCGC-AATGGTTG---TAGCCAGCGAACAGGTGCCACAGGTATCTAGCTAAACACACTT-GAGTCCTATTAACTTTTGTTTGATTTTATCAAG-------TATC----------A----------A-----AA-T-T-TAGACTTAAATT------------------TTGCATGGCTCTTTCAGTT---------------------------------------------------GATACC--------------------T-G---GATTGGTTAT-ATCTTACAAACATTACTGAATCATTAAGCTCTTTTAAATCC-CAATTAATCCCAA-ATTC-------CACC-ACCGC----------------A----GACTGACGGTCAGAGCGCAAAGACCAAGCAAAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
droAna3
TCTCT-----TTTCAAGCATT----CAG-AATGGTTT---TAATGGGAGAACAGGTGCCACAGGTAGATAGCCTCACTCACTT-CAACCGAA---ACCTATTTA--------TC--------------TAGA--AGTTG----------A-----AA-T-T-TAGACTTTGATT------------------TTGCATGTTT-CT-GATTT---------------------------------------------------GATTAAAAATTGGATACTTTTAAAACCTTC-AACCTTAAACC-------------TTTCCGAATAC----TT--TGGC---CCATGAACTAATTATAT-TCTT-------CGCA-TTCGC----------------A----GACAGTCGGTAAGCCGGCCAAAAATAAGCAAAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................ACTCACTT-CAACCGAA---ACCT...................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................ATGGTTT---TAATGGGAGAACAG................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
TCTCT-----TTTCAAGCATT----CAA-AATGGTTT---TAACGGGAGAACAGGTGCCACAGGTAGCTAGCCTCACTCACTT-CAACCGAA---ACCTATTTA--------CA--------------TAGA--AGCTC----------A-----AA-T-T-TAGACTTTGATT------------------TTGCATGTT-CCT-GATTT---------------------------------------------------GATTATACATTGGATATTTATAAAACT----AACTTGAAAGC-------------TTTTCAACTAC---TTT--TGT----TCTATAACTAATAATAT-T---TATTATTCGCT-TTCCC----------------A----GTCAGGCGGTAGGCCGGCCAATAATAAGCACAAGAAGCAAAGGCAACGCAASizeHit CountTotal NormTotal
No Reads
dp5
TCTCC-----TTGCAAGCTAT----CAA-AATGATTA---AAACGAGCGATCAGGTGTTACAGGTATCAGGCCTTACTCACTT-AAACC--------TTGTTAG--------CA------------CC--GT--AGTGC----------A-----CT-T-G-TAGTCTTTGGTT------------------TTGCATGCCTAAT-GATTT---------------------------------------------------GATTTAAAATTGTATCC---------T-A---GCTTGGTAGTTAT----------CTT--------------------------------AACTAAAC-ACCC-------CACT-CCCAC----------------A----GACCGAGAGTCAGACGACCAGGGCCAAGCAAAAGAAACAGAGGCAACGAAASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGAGTCAGACGACCAGG.............................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGACGACCAGGGCCAAGC......................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GACCGAGAGTCAGACGACCAGGGCCA.........................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGAGTCAGACGACCAGG.............................2011.0010100000000
droPer2
TCTCC-----TTGCAAGCTAT----CAA-AATGATTA---TAACGAGCGATCAGGTGTCACAGGTATCAGGCCTTACTCACTA-AAACC--------TTTTTAG--------CA------------CC--GT--AGTGC----------A-----CT-T-G-TAGTCTTTGGTT------------------TTGCATGCCTAAT-GATTT---------------------------------------------------GATTTAAAATTGTATCC---------T-A---GCTTGGTAGTTAT----------CTT--------------------------------AACTAAAC-ACCC-------CACT-CCCAC----------------A----GACCGAGAGTCAGACGACCAGGGCCAAGCAAAAGAAACTGAGGCAACGAAASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................TA---TAACGAGCGATCAGGTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
..........................................................................................................................................................................GGTT------------------TTGCATGCCTAAT-GATTT---------------------------------------------------G...............................................................................................................................................................................................2311.001010000
droWil2
TGTCT-----TTTTAAGCCAT----CAATCATGTTTTTGGTATCAAGTGAGCAGGCGACTCAGGTATCTAGACTCAGCAAA--------------ATTAATTAA--------TTAAG-------TTTTGAGT---------------------------------TTTTAGATA------------------TTGCATGTTTTT--AATTTAATTTAATTTCGAAAAATATTTGGCCCACTTATAAAACTTCT-------------------------------------T-------------CAA----------CTT--------------------------------TACTATCT-GTCA-------CACC-C--------------------------------TTTCAGA--ATCAAG-GTAAATCAAAGAAGCAACGCCAACGCAASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.........................................ATCAAGTGAGCAGGCGACTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
TGTCT-----TTTCAAGCCAA----CAA-AATGGTTA---TGACGGGCGAACAGGTAC-ATATGT----AGCCTCAATAACTT-T---------------TGTACAGTTT--------------------GA--AATAT----------A-----AG-T------TGTTTAATT------------------TGGCATGTTTATC-TAACA---------------------------------------------------AATCT--TACTTGCCCC---------C-AATAAT--------------------------------------------------------------AT-T---CAGTGTGTGCTTTCAACAGAACTCATCGACTTC--------------------TGCAGCGAACAAGCAGAAGAAGCAACGGCTACGCAASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................CAACAGAACTCATCGACTTC--------------------T...................................2111.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGAACTCATCGACTTC--------------------TGCA................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAAGAAGCAACGGCTA.....2211.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
TATAT-----TTTCAAGCCAA----CAA-AATGGTTA---TAAAAAGCGAACAGGTAC-ATATGTA----GCCTCATTAACTA-T-----TA----------AACTAGTG-GAA------------AT--GT--ATTAC----------A-----AC-T------TATTTTATTTGGCATTCGTAGTTAGATTGGAAAGCTATT--AGTAA---------------------------------------------------ATTTTCGATATAGCTGT----GCC--T-A---TTACATTAATTAT----------CTT--------------------------------TAC----------------------TCAATAGGGCTCATCGACCTC--------------------TGCAGTTACAAAGCAGAAGAAGCAACGGCAACGCAASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
...............................TGGTTA---TAAAAAGCGAACAG................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droGri2
TGTAT-----TTTCAAGCCTT---TCAA-AATGGTTG---TAACCAGTGAACAGGTAT-ATTTGCAGCTTTCCT----AACATAAACTTTCATTGACTTATTTT-A------GT--------------TTGC--AATAG----------A-----AA-T-TGTGA-TTTTTGTT------------------TGGCATGCTCATT-G-CAT--------------------------------------TTTTTCCTGTTTATATTTCCCATTGGCTCC----------------------------------------------------------CTTACATCCAATAATATATTTGT-TGTG-------CAAACTCCACAGGGGTCAACAAGCTT--------------------TCCGGTGTCCAAGCAGAAGAAACAACGCCAACGCAASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 12:23 AM