ID:

dse_1626

 Coordinate:

scaffold_9:1496280-1496430 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -3.4 -3.4

Flybase annnotation

CDS [Dsec\GM15647-cds]; exon [dsec_GLEANR_16471:3]; intron [Dsec\GM15647-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCCATCAGCCCTCGCTACCCCACTCCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAGCTCGCCGAGCAGAACAACAACGAACCAGATGGCGCCTACCTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCTGTC
************************************************************************************************************************(((...............(((...)))...............)))..........**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 M054
female body
 V113
male body		 V115
head
..........................................................................................................................................................................................ACAACAACGAACCAGATG............................................... 18 0 1 2.00 2 2 0 0 0
..............................................................................................................................................................................................................................CGCCCAAGTCCGGAAGATACT........ 21 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................GTACGCACAGCAACAGCAGCT............................................................................ 21 0 1 1.00 1 1 0 0 0
........................................................................................................................GCTACCCCACTCCGCAATCCCCCAGG......................................................................................................... 26 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................GCCCTCGTCGCCCAAGTCCGGAA.............. 23 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................GCCCTCGTCGCCCAAGTCCGGA............... 22 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................CCCAAGTCCGGAAGATACTCACCT... 24 0 1 1.00 1 0 1 0 0
...................................................................................................................................CCGCAATCCCCCAGGGCATCCAA................................................................................................. 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................CGCCGAGCAGAACAACAACGAACC.................................................... 24 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................................CGCCGAGCAGAACAACAACGAAC..................................................... 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................ACCCCACTCCGCAATCCCCCAGGG........................................................................................................ 24 0 1 1.00 1 1 0 0 0
...............................................................................................................................CACTCCGCAATCCCCCAGGGCATC.................................................................................................... 24 0 1 1.00 1 0 0 1 0
...............................................................................................................................................................................CGCCGAGCAGAACAACAAC......................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................................................................................................CATCCAAGTACGCACAGC...................................................................................... 18 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................AACAGCAGCTCGCCGAGCAGA................................................................. 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................GCCGAGCAGAACAACAACG........................................................ 19 0 1 1.00 1 1 0 0 0
....................................................................................................................................................ATCCAAGTACGCACAGCAACAGCAGCT............................................................................ 27 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................CAGCTCGCCGAGCAGAACAACAACG........................................................ 25 0 1 1.00 1 1 0 0 0
...................................................................................................................................................CATCCAAGTACGCACAGCAACAGTAGCT............................................................................ 28 1 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................GCCCAAGTCCGGAAGATACTCACCT... 25 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................AACAGCAGCTCGCCGAGCAGAACAAC............................................................ 26 0 1 1.00 1 1 0 0 0
............................................................................................................................................................ACGCACAGCAACAGCAGCTCG.......................................................................... 21 0 1 1.00 1 0 0 0 1
.....................................................................................................................................................................AACAGCAGCTCGCCGAGCAGAAC............................................................... 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................CACTCCGCAATCCCCCAGGGC....................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................GCAATCCCCCAGGGCATCC................................................................................................... 19 0 1 1.00 1 0 0 1 0
.....................................................................................................................................................................................................................................GTCCGGAAGATACTCACCTGT. 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................GCCGAGCAGAACAACAAC......................................................... 18 0 2 0.50 1 1 0 0 0
...................................................................................................................................................CATCTAAGTACCCACAGGA..................................................................................... 19 3 20 0.15 3 0 3 0 0
...................................................................................................................................................CATCTAAGTACCCACAGGAA.................................................................................... 20 3 20 0.10 2 0 2 0 0
........................................................................................................................................................AAGTACCCACAGGAACAGAA............................................................................... 20 3 14 0.07 1 0 0 1 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGGTAGTCGGGAGCGATGGGGTGAGGCGTTAGGGGGTCCCGTAGGTTCATGCGTGTCGTTGTCGTCGAGCGGCTCGTCTTGTTGTTGCTTGGTCTACCGCGGATGGACGGGAGCAGCGGGTTCAGGCCTTCTATGAGTGGACAG
****************************************************************************(((...............(((...)))...............)))..........************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V113
male body		 V115
head
 V114
embryo
................................................................................................................GTCTGAAGCGATGGGGTG......................................................................................................................... 18 2 1 8.00 8 8 0 0 0
................................................................................................................GTCTGAAGCGATGGGGTGG........................................................................................................................ 19 3 10 7.40 74 42 25 6 1
..................................................................................................................CGGGAGCGATGGGCTGGG....................................................................................................................... 18 2 3 1.33 4 3 1 0 0
..................................................................................................................CGGGAGTGATGGGCTGGGG...................................................................................................................... 19 3 14 0.50 7 2 4 1 0
..................................................................................................................CGGGAGTGATGGGCTGAG....................................................................................................................... 18 2 4 0.25 1 1 0 0 0
..................................................................................................................CGGGAGTGATGGGGTGAA....................................................................................................................... 18 2 4 0.25 1 0 1 0 0
..................................................................................................................CGGGAGTGATGGGCTGCG....................................................................................................................... 18 3 20 0.20 4 3 1 0 0
...............................................................................................................GGTCTGAAGCGATGGGGTG......................................................................................................................... 19 3 9 0.11 1 1 0 0 0
......................................................................................................................................................................................................GTCTAGCGCAGATGGTCGG.................................. 19 3 15 0.07 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_9:1496230-1496480 - dse_1626 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCCATCAGCCCTCGCTACCCCACTCCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCTGTC
droSim2 2r:18724189-18724334 - ---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCTCGCTACCCCACTCCGCAATCCCCCAGGGCATCGAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCCGTC
dm3 chr2R:18186570-18186715 - ---------------------------------------------------------------------------------------------------------ACCCCATCACCCCTCGCTACCCCACACCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCCGTC
droEre2 scaffold_4845:12326910-12327055 - ---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCTCGCTACCCCACCCCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------CGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGGTACTCCCCCGTC
droYak3 2R:17937397-17937542 - ---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCACGCTACCCCACTCCGCAATCGCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAGCCAGA------------TGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGGTACTCGCCCGTC
droEug1 scf7180000409672:6088974-6089119 - ---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCGCGCTACCCCACTCCCCAGTCCCCGAGGGCCTCGAAGTACGCCCAACAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCGTCTCCCAAGTCCGGAAGATACTCCCCTGTC
droBia1 scf7180000302143:2525395-2525540 + ---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCGCGCTACCCCACCCCCCAGTCGCCGAGGGCCTCGAAGTACTCCCAGCAGCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGCAGATACTCGCCGGTC
droTak1 scf7180000415739:39879-40033 - ---------------------------------------------------------------------------------------------------------ACCCCATCTCGCCGCGCTACCCCACCCCCCAGTCGCCGAGGGCTTCGAAGTACTCACAGCAGCAGCAGC-----AGC----------AGAAT---GCCGAGCAGAACAA------------------------CAACAACGAACCGGA------------TGGAGCCTAC---CTGCCCTCGTCCCCGAAATCCGGAAGATACTCGCCCGTC
droEle1 scf7180000491282:91704-91861 + ---------------------------------------------------------------------------------------------------------ACCCCATTAGTCCGCGCTACCCCACGCCCCAGTCGCCGCGGGCCTCGAAGTACGCCCAACAGCAGCAGCAGC--AGC----------AGCCC---GCCGAGCAGAACAA------------------------CAACAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCATCGCCCAAGTCCGGGCGGTATTCGCCCGTC
droRho1 scf7180000778226:43804-43949 + ---------------------------------------------------------------------------------------------------------ATCCGATCAGTCCGCGCTACCCCACGCCCCAGTCCCCGCGGGCCTCCAAGTACGCCCAGCAGCAGCAG---------------------GCC---GCCGAGCAGAACAA---------------------------CAACGAACCCGA------------CGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGCAGATACTCGCCCGTC
droFic1 scf7180000454066:2087662-2087813 - ---------------------------------------------------------------------------------------------------------ATCCCATTAGTCCGCGTTACCCAACTCCCCAATCTCCGAGGGCTTCCAAGTACGCCCAACACCAACAGC-----AAC----------CAGCC---GCCGAGCAAAACAA---------------------------CAACGAACCGGA------------TGGAGCTTAC---CTGCCCTCCTCTCCGAAATCCGGAAGGTACTCCCCCGTG
droKik1 scf7180000302471:1306178-1306329 + ---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCCCGCTACCCCACACCCCAGTCGCCGCGTGCCTCCAAGTACGCCCAGCATCAGCAG---------------------CCCGCTGCCGAGCAAAACAA------------------------CAACAATGAGCCGGA------------CGCCGCCTAC---CTGCCCTCGTCCCCGAAATCCGGCCGCTACTCGCCCGTC
droAna3 scaffold_13266:2201437-2201582 - ---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCGCGCTATCCCACACCTCAGTCCCCCCGAGCCTCCAAATACGCCCAGCACCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------CGCTGCCTAC---TTGCCCTCGTCCCCGAAATCGGGTCGCTACTCTCCCGTC
droBip1 scf7180000396384:379514-379659 + ---------------------------------------------------------------------------------------------------------ACCCCATTAGTCCGCGCTATCCCACCCCCCAATCCCCACGAGCCTCCAAGTACGCCCAGCACCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------CGCTGCCTAC---TTGCCCTCGTCCCCCAAATCGGGTCGCTACTCTCCAGTC
dp5 3:14948923-14949089 + ---------------------------------------------------------------------------------------------------------ACCCCATAACACCCCGTTACCCCACTCCGCAGTCACCACGCGCCTCCAAATACGCCCAGCACCCACAGAGCGGCAGCGGAACCGGATCTCCT---GATGAGCAGAACAA---------------------------CAACGAGCCGGA------------TAGCGCTTTC---CTGCCATCCTCGCCCAAATCGGGCCGCTACTCTCCGGTC
droPer2 scaffold_4:4102596-4102762 - ---------------------------------------------------------------------------------------------------------ACCCCATAACACCCCGTTACCCCACTCCACAGTCACCACGCGCCTCCAAATACGCCCAGCACCCACAGGGCGGCAGCGGAACCGGTTCTCCT---GATGAGCAGAACAA---------------------------CAACGAGCCGGA------------TAGCGCTTTC---CTGCCATCCTCGCCCAAATCGGGCCGCTACTCTCCGGTC
droWil2 scf2_1100000004510:220128-220288 + ---------------------------------------------------------------------------------------------------------ATCCGATTACACCGCGTTATCCCACACCACAGTCACCGAGAGCCTCCAAATATGCTCAGCAACAAGCC---------------------GGA---GCTGAACCCAATAA---------------------------CAATGATGTGGAAACCGATGGCAATGCCACATATCCACTGCCATCGTCACCCAAATCGGGACGCTATTCGCCCGTT
droVir3 scaffold_10324:682819-683000 - ---------------------------------------------------------------------------------------------------------ATCCCATCACACCGCGTTATCCCACACCGCAGTCGCCGCGCGCCTCCAAGTACGCACAGCATCCACAGGGCC--AGG----------CCGCC---GGCGAGCAGAACAACAACAACAACAACAATAATAACAACAACAATGAACCGGA------------TGGCGCCTAC---TTGCCCTCCTCACCCAAATCCGGCCGCTATTCGCCCGTC
droMoj3 scaffold_6496:2522235-2522398 - ---------------------------------------------------------------------------------------------------------ATCCAATCACACCGCGTTATCCCACACCACAGTCGCCGCGTGCCTCCAAATATGCGCAGCATCCACAGTCCG--GCG----------ATGCC---AATGAGCAGAACAACAACAA------------------CAACAATGAGCCGGA------------TGGCTCCTAT---TTGCCTTCCTCGCCAAAATCTGGTCGCTACTCGCCTGTC
droGri2 scaffold_15245:8397234-8397400 - ---------------------------------------------------------------------------------------------------------ACCCAATCACACCGAGATATCCGACACCGCAGTCACCGCGTGCATCCAAATATGCACAGCATCCACAGG-----GCG----------ATGCT---GGCGAGCAGAACAACAACAACAATA------------ACAACAATGAACCCGA------------TGGAGCCTAT---TTGCCATCATCACCCAAGTCCGGTCGTTACTCGCCCGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCCATCAGCCCTCGCTACCCCACTCCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCTGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................ACAA---------------------------CAACGAACCAGA------------TG..................................................1812.0020020
................................................................................................................................................................................................................................................................................................CGCCCAAGTCCGGAAGATACT........2111.0010010
..........................................................................................................................................................GTACGCACAGCAACAGCAG---------------------CT.........................................................................................................................2111.0010010
........................................................................................................................GCTACCCCACTCCGCAATCCCCCAGG...........................................................................................................................................................................2611.0011000
........................................................................................................................................................................................................................................................................................GCCCTCGTCGCCCAAGTCCGGAA..............2311.0010010
........................................................................................................................................................................................................................................................................................GCCCTCGTCGCCCAAGTCCGGA...............2211.0010010
..................................................................................................................................................................................................................................................................................................CCCAAGTCCGGAAGATACTCACCT...2411.0011000
...................................................................................................................................CCGCAATCCCCCAGGGCATCCAA...................................................................................................................................................................2311.0010010
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGAACC...................................................................2411.0011000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGAAC....................................................................2311.0010010
...........................................................................................................................ACCCCACTCCGCAATCCCCCAGGG..........................................................................................................................................................................2411.0010010
...............................................................................................................................CACTCCGCAATCCCCCAGGGCATC......................................................................................................................................................................2411.0010100
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAAC........................................................................1911.0010010
...................................................................................................................................................CATCCAAGTACGCACAGC........................................................................................................................................................1811.0010010
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGA...........................................................................................................2111.0010010
........................................................................................................................................................................................................GCCGAGCAGAACAA---------------------------CAACG.......................................................................1911.0010010
....................................................................................................................................................ATCCAAGTACGCACAGCAACAGCAG---------------------CT.........................................................................................................................2711.0010010
..........................................................................................................................................................................CAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACG.......................................................................2511.0010010
.................................................................................................................................................................................................................................................................................................GCCCAAGTCCGGAAGATACTCACCT...2511.0010010
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------C...........................................................................2611.0010010
............................................................................................................................................................ACGCACAGCAACAGCAG---------------------CTC---G....................................................................................................................2111.0010001
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGAAC.........................................................................................................2311.0010010
...............................................................................................................................CACTCCGCAATCCCCCAGGGC.........................................................................................................................................................................2111.0010010
.....................................................................................................................................GCAATCCCCCAGGGCATCC.....................................................................................................................................................................1911.0010100
.......................................................................................................................................................................................................................................................................................................GTCCGGAAGATACTCACCTGT.2111.0010010
........................................................................................................................................................................................................GCCGAGCAGAACAA---------------------------CAAC........................................................................1820.5010010
droSim2
---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCTCGCTACCCCACTCCGCAATCCCCCAGGGCATCGAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCCGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................ATCGAAGTACGCACAGCAACAGCA.................................................................................................................................................2412.00200200000000000000
.........................................................................................................................................................................................................................................................................................................CCGGAAGATACTCACCCGT.1911.00101000000000000000
............................................................................................................................................................................................................AGCAGAACAA---------------------------CAACGAAC....................................................................1811.00101000000000000000
...............................................................................................................................................................................................................................................................................CTAC---CTGCCCTCGTCGCC.........................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................CGCCCAAGTCCGGAAGATACTCACCCGT.2811.00100100000000000000
....................................................................................................................................................................................................................................................CGAACCAGA------------TGGCGCCTA...........................................1811.00110000000000000000
...................................................................................................................................................................................................................................................................................................CCAAGTCCGGAAGATACTCACCCGT.2511.00101000000000000000
...............................................................................................................................................................................................................AGAACAA---------------------------CAACGAACCAGA------------TGGCGCCT............................................2711.00100100000000000000
..........................................................................................................................................................................................................CGAGCAGAACAA---------------------------CAACGAACCAGA------------T...................................................2511.00110000000000000000
dm3
---------------------------------------------------------------------------------------------------------ACCCCATCACCCCTCGCTACCCCACACCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGATACTCACCCGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................CAGGGCATCCAAGTACGCACA..........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CAGGGCATCCAAGTACGCA............................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AGGGCATCCAAGTACGCAC...........................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CAGGGCATCCAAGTACGCAC...........................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CGCCTAC---CTGCCCTCGTCGCC.........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CTGCCCTCGTCGCCCAAGTCCGGAAGATC..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................CAG---------------------CTC---GCCGAGCAGAACAA---------------------------C...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GCAGAACAA---------------------------CAACGAACCAGA------------TG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GCGCCTAC---CTGCCCTCGTCGC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GTCGCCCAAGTCCGGAAGA............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................CGCACAGCAACAGCAG---------------------CTC---GC...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................CAGCAG---------------------CTC---GCCGAGCAGAAC.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GCGCCTAC---CTGCCCTCGTCGCCCAA......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------C...........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CGTCGCCCAAGTCCGGAAGATA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................C---CTGCCCTCGTCGCCCAAGTCCGGAAGA............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................CAGCAG---------------------CTC---GCCGAGCAGAACA........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTCCGGAAGATACTCACCC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CAGCAACAGCAG---------------------CTC---GCCGAGCA.............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................AGCAACAGCAG---------------------CTC---GCCGAGCAGAA..........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CAACAGCAG---------------------CTC---GCCGAGCA.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAAC........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................ACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CA..........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................AGCAG---------------------CTC---GCCGAGCAGAACA........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................CCGCAATCCCCCAGGGCATCCAAGTA................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CAACAGCAG---------------------CTC---GCCGAGCAGAACA........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TGCCCTCGTCGCCCAAGTCCG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................CCTCGTCGCCCAAGTCCGGTT..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................AACAA---------------------------CAACGAACCAGA------------TGGC................................................2111.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAAGTCCGGAAGATACTCACCCGT.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ACAGCAACAGCAG---------------------CTC---GCC..................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................CCATCACCCCTCGCTACC...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------A...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ACCCCTCGCTACCCCACA..........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATCACCCCTCGCTACCCCAC...........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGAAC.........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCTCGCTACCCCACCCCGCAATCCCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCAGA------------CGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGGTACTCCCCCGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................CGCTACCCCACCCCGCAATCCCCCAGGGC.........................................................................................................................................................................2912.0020001010
..........................................................................................................................................................GTACGCACAGCAACAGCAG---------------------CTC---G....................................................................................................................2312.0020000200
..............................................................................................................................................................GCACAGCAACAGCAG---------------------CTC---GCC..................................................................................................................2112.0021000100
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGA...........................................................................................................2112.0021000010
.............................................................................................................................................................................................................................................................................................CGTCGCCCAAGTCCGGAAGGT...........2111.0010001000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAACCAGA------------CG..................................................2011.0010000100
................................................................................................................................................................................................................................................................................................CGCCCAAGTCCGGAAGGT...........1811.0010000010
.......................................................................................................................CGCTACCCCACCCCGCAATCCCCCAGG...........................................................................................................................................................................2711.0011000000
....................................................................................................................................................................CAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------C...........................................................................2711.0010100000
.....................................................................................................................................................................................................................A---------------------------CAACGAACCAGA------------CGCCGC..............................................1911.0010000010
..............................................................................................................................................................GCACAGCAACAGCAG---------------------CTC---GCCGAGCAG............................................................................................................2711.0011000000
..........................................................................................................................TACCCCACCCCGCAATCCCCCAGGGC.........................................................................................................................................................................2611.0011000000
................................................................................................................................................................ACAGCAACAGCAG---------------------CTC---GCCGAGCAGAAC.........................................................................................................2811.0010001000
................................................................................................................................................................ACAGCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2311.0010000010
.........................................................................................................................................................................................................................................................................................................CCGGAAGGTACTCCCCCGT.1911.0011000000
....................................................................................................................................................ATCCAAGTACGCACAGCAACAGC..................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................ACAA---------------------------CAACGAACCAGA------------CGC.................................................1911.0010100000
..................................................................................................................................................................AGCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2111.0011000000
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------............................................................................2511.0010000100
....................................................................................................................................................................................................................................................CGAACCAGA------------CGCCGCCTAC---CT.....................................2111.0010000010
.....................................................................................................................................................................................................................................................GAACCAGA------------CGCCGCCTAC---CTGCCCTCGT.............................2811.0011000000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAACCAGA------------CGCC................................................2211.0010000100
...................................................................................................................................................CATCCAAGTACGCACAGCAACAGCAG---------------------C..........................................................................................................................2711.0010000010
................................................................................................................................................................................................................GAACAA---------------------------CAACGAACCAGA------------CGC.................................................2111.0010100000
..............................................................................................................................................................................................................CAGAACAA---------------------------CAACGAACCAGA------------CGC.................................................2311.0011000000
....................................................................................................................................................ATCCAAGTACGCACAGCAAC.....................................................................................................................................................2011.0010000100
..........................................................................................................................................................................CAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACC...................................................................2911.0011000000
...............................................................................................................................................AGGGCATCCAAGTACGCACAGCAAC.....................................................................................................................................................2511.0010000100
..............................................................................................................................................................GCACAGCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2511.0010001000
............................................................................................................................................................ACGCACAGCAACAGCAG---------------------CTC---G....................................................................................................................2111.0010000100
.....................................................................................................................................................................AACAGCAG---------------------CTC---GCCGAGCAGAA..........................................................................................................2211.0010100000
....................................................................................................................................................................................................................................................................................................CAAGTCCGGAAGGTACTCCCCCGT.2411.0011000000
droYak3
---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCACGCTACCCCACTCCGCAATCGCCCAGGGCATCCAAGTACGCACAGCAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAGCCAGA------------TGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGAAGGTACTCGCCCGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................TGCCCTCGTCGCCCAAGTCCGGAAG.............2514.00400000000004
....................................................................................................................................................ATCCAAGTACGCACAGCAACAGCAG---------------------CT.........................................................................................................................2713.00302000010000
..............................................................................................................................................................GCACAGCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2512.00200200000000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCAGA------------TGCCGCC.............................................2512.00202000000000
...........................................................................................................................ACCCCACTCCGCAATCGCCCAGGG..........................................................................................................................................................................2412.00202000000000
..............................................................................................................................................................GCACAGCAACAGCAG---------------------CTC---GCCGAGCAGA...........................................................................................................2812.00201000010000
............................................................................................................................................................ACGCACAGCAACAGCAG---------------------CT.........................................................................................................................1912.00202000000000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGAGCC...................................................................2412.00201100000000
....................................................................................................................................................................CAACAGCAG---------------------CTC---GCCGAGCAG............................................................................................................2111.00101000000000
..........................................................................................................................................................................................................CGAGCAGAACAA---------------------------CAACGAGCCAGA------------TGCC................................................2811.00100000010000
..........................................................................................................................................CGCCCAGGGCATCCAAGTAC...............................................................................................................................................................2011.00101000000000
...........................................................................................................................................................TACGCACAGCAACAGCAG---------------------CT.........................................................................................................................2011.00101000000000
................................................................................................................CAGTCCACGCTACCCCACTCCGC......................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................GCCGAGCAGAACAA---------------------------CAACGAGCCAGA------------....................................................2611.00101000000000
................................................................................................................................................................................................................................................................................................CGCCCAAGTCCGGAAGGTACTC.......2211.00100010000000
........................................................................................................................................................................................................................................................................................................TCCGGAAGGTACTCGCCCGT.2011.00101000000000
...................................................................................................................................................CATCCAAGTACGCACAGCAACAGCAG---------------------CT.........................................................................................................................2811.00101000000000
................................................................................................................................................................ACAGCAACAGCAG---------------------CTC---GCCGAGC..............................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................GTCCGGAAGGTACTCGCC....1811.00110000000000
..........................................................................................................................................................................................................................................................AGA------------TGCCGCCTAC---CTGCCCTCGT.............................2311.00100100000000
................................................................................................................................ACTCCGCAATCGCCCAGGGC.........................................................................................................................................................................2011.00101000000000
.............................................................................................................................................................CGCACAGCAACAGCAG---------------------CTC---GCCGAGCA.............................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................................................GTCCGGAAGGTACTCGCCC...1911.00100100000000
...............................................................................................................................................................................................................AGAACAA---------------------------CAACGAGCCAGA------------TG..................................................2111.00100000010000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGAGC....................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................TGCCCTCGTCGCCCAAGTCCGGA...............2311.00101000000000
.............................................................................................................................................................................................................................................................................GCCTAC---CTGCCCTCGTCGCCC........................2111.00101000000000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGA......................................................................2111.00100000010000
.......................................................................................................................................................................................................................................................................................TGCCCTCGTCGCCCAAGTCC..................2011.00100000010000
........................................................................................................................................................................................................GCCGAGCAGAACAA---------------------------CAACG.......................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................CAAGTCCGGAAGGTACTCGCCC...2211.00110000000000
..........................................................................................................................................................................................................................................................AGA------------TGCCGCCTAC---CTGCCCT................................2011.00101000000000
.....................................................................................................................................................................................................................A---------------------------CAACGAGCCAGA------------TGCCGCCTAC---CT.....................................2511.00101000000000
..................................................................................................................................................GCATCCAAGTACGCACAGCA.......................................................................................................................................................2011.00101000000000
..............................................................................................................................................................................................................CAGAACAA---------------------------CAACGAGCCAGA------------T...................................................2111.00110000000000
....................................................................................................................................................................................................................AA---------------------------CAACGAGCCAGA------------TGCCGCC.............................................2111.00100000010000
........................................................................................................................................................................................................................................................CCAGA------------TGCCGCCTAC---CTGCCCTC...............................2311.00100100000000
...................................................................................................................................................................................................................................................ACGAGCCAGA------------TGCCGCCTAC---CTGC...................................2411.00101000000000
...........................................................................................................................ACCCCACTCCGCAATCGCCCAGG...........................................................................................................................................................................2311.00101000000000
......................................................................................................................ACGCTACCCCACTCCGCAATC..................................................................................................................................................................................2111.00101000000000
................................................................................................................................ACTCCGCAATCGCCCAGGG..........................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................AACAA---------------------------CAACGAGCCAGA------------TGCC................................................2111.00100000010000
..........................................................................................................................................CGCCCAGGGCATCCAAGTACGCAC...........................................................................................................................................................2411.00101000000000
...........................................................................................................................................................................................................GAGCAGAACAA---------------------------CAACGAGC....................................................................1911.00100000010000
....................................................................................................................................................................................................C---GCCGAGCAGAACAA---------------------------CAACGAGCCAGA------------....................................................2711.00100000010000
.................................................................................................................................................................CAGCAACAGCAG---------------------CTC---GCCGAGCA.............................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................................................CTAC---CTGCCCTCGTCGCCCAAGTCC..................2511.00100010000000
droEug1
---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCGCGCTACCCCACTCCCCAGTCCCCGAGGGCCTCGAAGTACGCCCAACAACAGCAG---------------------CTC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCGTCTCCCAAGTCCGGAAGATACTCCCCTGTCSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCGCGCTACCCCACCCCCCAGTCGCCGAGGGCCTCGAAGTACTCCCAGCAGCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGCAGATACTCGCCGGTCSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------ACCCCATCTCGCCGCGCTACCCCACCCCCCAGTCGCCGAGGGCTTCGAAGTACTCACAGCAGCAGCAGC-----AGC----------AGAAT---GCCGAGCAGAACAA------------------------CAACAACGAACCGGA------------TGGAGCCTAC---CTGCCCTCGTCCCCGAAATCCGGAAGATACTCGCCCGTCSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------ACCCCATTAGTCCGCGCTACCCCACGCCCCAGTCGCCGCGGGCCTCGAAGTACGCCCAACAGCAGCAGCAGC--AGC----------AGCCC---GCCGAGCAGAACAA------------------------CAACAACGAACCGGA------------TGGCGCCTAC---CTGCCCTCATCGCCCAAGTCCGGGCGGTATTCGCCCGTCSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------ATCCGATCAGTCCGCGCTACCCCACGCCCCAGTCCCCGCGGGCCTCCAAGTACGCCCAGCAGCAGCAG---------------------GCC---GCCGAGCAGAACAA---------------------------CAACGAACCCGA------------CGCCGCCTAC---CTGCCCTCGTCGCCCAAGTCCGGCAGATACTCGCCCGTCSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------ATCCCATTAGTCCGCGTTACCCAACTCCCCAATCTCCGAGGGCTTCCAAGTACGCCCAACACCAACAGC-----AAC----------CAGCC---GCCGAGCAAAACAA---------------------------CAACGAACCGGA------------TGGAGCTTAC---CTGCCCTCCTCTCCGAAATCCGGAAGGTACTCCCCCGTGSizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------------------------------------------------------------------------ACCCCATCAGCCCCCGCTACCCCACACCCCAGTCGCCGCGTGCCTCCAAGTACGCCCAGCATCAGCAG---------------------CCCGCTGCCGAGCAAAACAA------------------------CAACAATGAGCCGGA------------CGCCGCCTAC---CTGCCCTCGTCCCCGAAATCCGGCCGCTACTCGCCCGTCSizeHit CountTotal NormTotal
No Reads
droAna3
---------------------------------------------------------------------------------------------------------ACCCCATCAGTCCGCGCTATCCCACACCTCAGTCCCCCCGAGCCTCCAAATACGCCCAGCACCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------CGCTGCCTAC---TTGCCCTCGTCCCCGAAATCGGGTCGCTACTCTCCCGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................ACAA---------------------------CAACGAACCGGA------------CGCTGC..............................................2212.002010010
................................................................................................................................................................................................................GAACAA---------------------------CAACGAACCGGA------------C...................................................1912.002011000
.................................................................................................................................................................................................................AACAA---------------------------CAACGAACCGGA------------CGCT................................................2111.001100000
......................................................................................................................................CAGTCCCCCCGAGCCTCCAAATAC...............................................................................................................................................................2411.001010000
..................................................................................................................GTCCGCGCTATCCCACACCTCAGT...................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................TGCCCTCGTCCCCGAAATCGGGTC..............2411.001001000
...........................................................................................................................ATCCCACACCTCAGTCCCCCCGAGCCT.......................................................................................................................................................................2711.001000001
.....................................................................................................................................................................................................................A---------------------------CAACGAACCGGA------------CGCTGCCTAC---C......................................2411.001010000
...........................................................................................................................ATCCCACACCTCAGTCCCCCC.............................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................ACGAACCGGA------------CGCTGCCTAC---TTGCCCTC...............................2811.001100000
........................................................................................................................................................................................................................................................................................................TCGGGTCGCTACTCTCCCGT.2011.001100000
......................................................................................................................................................................................................................................................................................TTGCCCTCGTCCCCGAAAT....................1911.001100000
..............................................................................................................................................................................................................................................................................................GTCCCCGAAATCGGGTCGCTACTCTC.....2611.001010000
............................................................................................................................................................................G---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCG..................................................................2811.001100000
........................................................................................................................................................................................................................................................CCGGA------------CGCTGCCTAC---TTGCC..................................2011.001010000
....................................................................................................................................................................................................................AA---------------------------CAACGAACCGGA------------CGCTGCC.............................................2111.001010000
..........................................................................................................................................................................................................CGAGCAGAACAA---------------------------CAACGAACC...................................................................2111.001010000
droBip1
---------------------------------------------------------------------------------------------------------ACCCCATTAGTCCGCGCTATCCCACCCCCCAATCCCCACGAGCCTCCAAGTACGCCCAGCACCAGCAG---------------------CCC---GCCGAGCAGAACAA---------------------------CAACGAACCGGA------------CGCTGCCTAC---TTGCCCTCGTCCCCCAAATCGGGTCGCTACTCTCCAGTCSizeHit CountTotal NormTotal
No Reads
dp5
---------------------------------------------------------------------------------------------------------ACCCCATAACACCCCGTTACCCCACTCCGCAGTCACCACGCGCCTCCAAATACGCCCAGCACCCACAGAGCGGCAGCGGAACCGGATCTCCT---GATGAGCAGAACAA---------------------------CAACGAGCCGGA------------TAGCGCTTTC---CTGCCATCCTCGCCCAAATCGGGCCGCTACTCTCCGGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................GAGCAGAACAA---------------------------CAACGAGCCGGA------------T...................................................2413.0030300000000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCGGA------------TAGC................................................2212.0020200000000
..............................................................................................................................................................GCCCAGCACCCACAGAGCGGC..........................................................................................................................................2112.0020100001000
.......................................................................................................................................................................................GAACCGGATCTCCT---GATGAGC..............................................................................................................2112.0020100100000
...............................................................................................................................................................................................................AGAACAA---------------------------CAACGAGCCGGA------------T...................................................2012.0020200000000
......................................................................................................................................................................................GGAACCGGATCTCCT---GATGAGCA.............................................................................................................2311.0010100000000
.............................................................................................................................................................................................................GCAGAACAA---------------------------CAACGAGCCGG.................................................................2011.0010100000000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCGGA------------T...................................................1911.0010100000000
..........................................................................................................................................................................CAGAGCGGCAGCGGAACCGG...............................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................AGCGCTTTC---CTGCCATCCTCGCC.........................2311.0010000100000
..........................................................................................................................................................ATACGCCCAGCACCCACAGAGC.............................................................................................................................................2211.0010000100000
..........................................................................................................................TACCCCACTCCGCAGTCACC...............................................................................................................................................................................2011.0010010000000
....................................................................................................................................................................................GCGGAACCGGATCTCCT---GATGAGC..............................................................................................................2411.0010100000000
......................................................................................................................................................................................GGAACCGGATCTCCT---GATGAGC..............................................................................................................2211.0010100000000
....................................................................................................................................................................................................T---GATGAGCAGAACAA---------------------------CAACGAGCC...................................................................2411.0010000001000
.....................................................................................................................................................................................................................................................GAGCCGGA------------TAGCGCTTTC---CTGC...................................2211.0010100000000
..........................................................................................................................................................................................................................................................................AGCGCTTTC---CTGCCATCCTC............................2011.0010100000000
...............................................................................................................................................................................................................................................................................................TCGCCCAAATCGGGCCGCTACTCTCC....2611.0010100000000
.................................................................................................................................................................................................................AACAA---------------------------CAACGAGCCGGA------------TAGCGCT.............................................2411.0010100000000
...................................................................................................................................................................................AGCGGAACCGGATCTCCT---G....................................................................................................................1911.0010100000000
........................................................................................................................................................................................AACCGGATCTCCT---GATGAGC..............................................................................................................2011.0010000100000
.......................................................................................................................................................................................................................................................GCCGGA------------TAGCGCTTTC---CTGC...................................2011.0010100000000
..................................................................................................................................................................................................CCT---GATGAGCAGAACAA---------------------------CAAC........................................................................2111.0010000100000
.......................................................................................................................................................................................GAACCGGATCTCCT---GATGAGCA.............................................................................................................2211.0010100000000
......................................................................................................................................................................................GGAACCGGATCTCCT---GATG.................................................................................................................1911.0010100000000
........................................................................................................................GTTACCCCACTCCGCAGTCACCACGCGC.........................................................................................................................................................................2811.0010010000000
...........................................................................................................................ACCCCACTCCGCAGTCACCACGCGC.........................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................CTCCT---GATGAGCAGAACAA---------------------------C...........................................................................2011.0010100000000
......................................................................................................................................................................................GGAACCGGATCTCCT---GATGAGCAG............................................................................................................2411.0010010000000
...........................................................................................................................ACCCCACTCCGCAGTCACCA..............................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................AGCGGAACCGGATCTCCT---GATGAGCA.............................................................................................................2611.0010100000000
.........................................................................................................................................................................................ACCGGATCTCCT---GATGAGCA.............................................................................................................2011.0010100000000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCGGA------------TAGCGCT.............................................2511.0010000100000
..........................................................................................................................................................................................CCGGATCTCCT---GATGAGCA.............................................................................................................1911.0010100000000
..........................................................................................................................................................................CAGAGCGGCAGCGGAACCGGATCTC..........................................................................................................................2511.0010000001000
droPer2
---------------------------------------------------------------------------------------------------------ACCCCATAACACCCCGTTACCCCACTCCACAGTCACCACGCGCCTCCAAATACGCCCAGCACCCACAGGGCGGCAGCGGAACCGGTTCTCCT---GATGAGCAGAACAA---------------------------CAACGAGCCGGA------------TAGCGCTTTC---CTGCCATCCTCGCCCAAATCGGGCCGCTACTCTCCGGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................GCCGGA------------TAGCGCTTTC---CTGCC..................................2114.004400000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCGGA------------T...................................................1913.003300000
....................................................................................................................................................................................................................................................................................................CAAATCGGGCCGCTACTCTCC....2112.002200000
..................................................................................................................................................................................................................ACAA---------------------------CAACGAGCCGGA------------TA..................................................1812.002200000
.............................................................................................................................................................................GGCGGCAGCGGAACCGGTTCTCCT---GATG.................................................................................................................2812.002200000
................................................................................................................................................................................................................GAACAA---------------------------CAACGAGCCGGA------------TAG.................................................2112.002200000
.................................................................................................................................................................................................................AACAA---------------------------CAACGAGCCGGA------------T...................................................1811.001100000
............................................................................................................................................................................................GGTTCTCCT---GATGAGCAGAA..........................................................................................................2011.001000001
.................................................................................................................................................................................GCAGCGGAACCGGTTCTCCT---.....................................................................................................................2011.001010000
....................................................................................................................................................................................................T---GATGAGCAGAACAA---------------------------CAACGAGCC...................................................................2411.001100000
....................................................................................................................................................................................................................AA---------------------------CAACGAGCCGGA------------TAGC................................................1811.001010000
......................................................................................................................................................................................GGAACCGGTTCTCCT---GATGAGC..............................................................................................................2211.001010000
..........................................................................................................................................................ATACGCCCAGCACCCACAGG...............................................................................................................................................2011.001010000
...........................................................................................................................................................................................................GAGCAGAACAA---------------------------CAACGAGCCGGA------------T...................................................2411.001000001
...................................................................................................................................................................................................................CAA---------------------------CAACGAGCCGGA------------TAGCG...............................................2011.001100000
................................................................................................................................................................................................................................................................................................CGCCCAAATCGGGCCGCTACTCTCC....2511.001010000
...............................................................................................................................................................................................................AGAACAA---------------------------CAACGAGCCGGA------------T...................................................2011.001100000
.............................................................................................................................................................................GGCGGCAGCGGAACCGGTT.............................................................................................................................1911.001010000
.............................................................................................................................................................................................GTTCTCCT---GATGAGCAGAA..........................................................................................................1911.001010000
................................................................................................................................................................................................CTCCT---GATGAGCAGAACAA---------------------------CAACGAGCC...................................................................2811.001100000
........................................................................................................................................................................CACAGGGCGGCAGCGGAACCG................................................................................................................................2111.001010000
droWil2
---------------------------------------------------------------------------------------------------------ATCCGATTACACCGCGTTATCCCACACCACAGTCACCGAGAGCCTCCAAATATGCTCAGCAACAAGCC---------------------GGA---GCTGAACCCAATAA---------------------------CAATGATGTGGAAACCGATGGCAATGCCACATATCCACTGCCATCGTCACCCAAATCGGGACGCTATTCGCCCGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................AA---------------------------CAATGATGTGGAAACCGATGGCA.....................................................2515.00510130
..................................................................................................................................................................................................................ATAA---------------------------CAATGATGTGGAAACCGATGGC......................................................2613.00300210
.................................................................................................................................................................................................................AATAA---------------------------CAATGATGTGGAAACC............................................................2112.00220000
..........................................................................................................................................CACCGAGAGCCTCCAAATATGC.............................................................................................................................................................2212.00200200
....................................................................................................................................................................................................................AA---------------------------CAATGATGTGGAAACC............................................................1812.00220000
.................................................................................................................................................................CAGCAACAAGCC---------------------GGA---GCT..................................................................................................................1812.00210010
....................................................................................................................................................................................................................AA---------------------------CAATGATGTGGAAACCGATGGC......................................................2412.00200200
..................................................................................................................................................................................................................................................AATGATGTGGAAACCGATGGCA.....................................................2221.50300300
...................................................................................................................................................................................................................................................ATGATGTGGAAACCGATGGCA.....................................................2121.50301200
.................................................................................................................................CACCACAGTCACCGAGAGCC........................................................................................................................................................................2011.00100100
.....................................................................................................................CGCGTTATCCCACACCACAGTCACCG..............................................................................................................................................................................2611.00100100
...........................................................................................................................................................................................................GAACCCAATAA---------------------------CAATGATGT...................................................................2011.00101000
........................................................................................................................GTTATCCCACACCACAGTCACCGAGAGC.........................................................................................................................................................................2811.00100100
.....................................................................................................................................................................................................................................................GATGTGGAAACCGATGGCA.....................................................1921.00200110
......................................................................................................................................................................ACAAGCC---------------------GGA---GCTGAACC.............................................................................................................1811.00110000
....................................................................................................................................................................................................................................................................................CACTGCCATCGTCACCCAAATCGGGAC..............2711.00110000
...........................................................................................................................................ACCGAGAGCCTCCAAATATGCT............................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................TAA---------------------------CAATGATGTGGAAACCGAT.........................................................2211.00100010
..........................................................................................................................................CACCGAGAGCCTCCAAATATGCT............................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................................ATGATGTGGAAACCGATGGC......................................................2021.00200020
...................................................................................................................................................................GCAACAAGCC---------------------GGA---GCTGAAC..............................................................................................................2011.00100100
.......................................................................................................................................................................CAAGCC---------------------GGA---GCTGAACCCAATAA---------------------------CAAT........................................................................2711.00110000
.............................................................................................................................................................................................................ACCCAATAA---------------------------CAATGATGTGGAAACC............................................................2511.00101000
..........................................................................................................................TATCCCACACCACAGTCACCGAGAGC.........................................................................................................................................................................2611.00100100
....................................................................................................................................................................CAACAAGCC---------------------GGA---GCTGAACC.............................................................................................................2011.00100100
................................................................................................................................ACACCACAGTCACCGAGAGC.........................................................................................................................................................................2011.00100100
...............................................................................................................................CACACCACAGTCACCGAGAGC.........................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................CGTCACCCAAATCGGGAC..............1811.00110000
................................................................................................................TACACCGCGTTATCCCACACCACAGT...................................................................................................................................................................................2611.00101000
................................................................................................................................................................................................................CAATAA---------------------------CAATGATGTGGAAACCGATGGC......................................................2811.00100100
.........................................................................................................................................................................................................................................................................................CCATCGTCACCCAAATCGGGACGCT...........2511.00101000
...........................................................................................................................................................................CC---------------------GGA---GCTGAACCCAATAA---------------------------C...........................................................................2011.00110000
........................................................................................................................................................................................................GCTGAACCCAATAA---------------------------CAATGATGTGGA................................................................2611.00100010
...............................................................................................................TTACACCGCGTTATCCCACAC.........................................................................................................................................................................................2111.00100100
........................................................................................................................................................................................................GCTGAACCCAATAA---------------------------CAATGATGTG..................................................................2411.00100100
.....................................................................................................................................................................AACAAGCC---------------------GGA---GCTGAACCCAAT.........................................................................................................2311.00100100
...........................................................................................................................ATCCCACACCACAGTCACCGAGAGC.........................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................................................................................................................ACTGCCATCGTCACCCAAATCG..................2211.00100001
...................................................................................................................................................................GCAACAAGCC---------------------GGA---GCTGAACCCAA..........................................................................................................2411.00101000
......................................................................................................................................................................................................................................................ATGTGGAAACCGATGGCAAT...................................................2020.50100100
...................................................................................................................................................................................................................................................ATGATGTGGAAACCGATGGCAATG..................................................2420.50100100
........................................................................................................................................................................................................................................................................ATGCCACATATCCACTGC...................................1820.50101000
...............................................................................................................................................................................................................................................................................ATATCCACTGCCATCGTCACC.........................2120.50100010
.................................................................................................................................................................................................................................................................................ATCCACTGCCATCGTCAC..........................1820.50110000
..................................................................................................................................................................................................................................................AATGATGTGGAAACCGATGG.......................................................2020.50100010
........................................................................................................................................................................................................................................................................ATGCCACATATCCACTGCCAT................................2120.50101000
...................................................................................................................................................................................................................................................ATGATGTGGAAACCGATG........................................................1820.50100010
.................................................................................................................................................................................................................................................CAATGATGTGGAAACCGAT.........................................................1920.50101000
......................................................................................................................................................................................................................................................ATGTGGAAACCGATGGCA.....................................................1820.50100010
.....................................................................................................................................................................................................................................................GATGTGGAAACCGATGGCAA....................................................2020.50100100
.................................................................................................................................................................................................................................................CAATGATGTGGAAACCGATGGCA.....................................................2320.50101000
...................................................................................................................................................................................................................................................ATGATGTGGAAACCGATGGCAATGCC................................................2620.50101000
....................................................................................................................................................................................................................................................TGATGTGGAAACCGATGGC......................................................1920.50100010
droVir3
---------------------------------------------------------------------------------------------------------ATCCCATCACACCGCGTTATCCCACACCGCAGTCGCCGCGCGCCTCCAAGTACGCACAGCATCCACAGGGCC--AGG----------CCGCC---GGCGAGCAGAACAACAACAACAACAACAATAATAACAACAACAATGAACCGGA------------TGGCGCCTAC---TTGCCCTCCTCACCCAAATCCGGCCGCTATTCGCCCGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................ATAACAACAACAATGAACCGGA------------TGG.................................................2512.002000000000000000001000000000000000000000000000000000000000001000
..............................................................................................................ATCACACCGCGTTATCCCACACCGCAGT...................................................................................................................................................................................2812.002000000000000000000000000000001000000000000000000000000000001000
.......................................................................................................................................................................CCACAGGGCC--AGG----------CCGCC---GGC..................................................................................................................2112.002000100000000000100000000000000000000000000000000000000000000000
..........................................................................................................................TATCCCACACCGCAGTCGCCGCGCGC.........................................................................................................................................................................2612.002001000000000001000000000000000000000000000000000000000000000000
................................................................................................................CACACCGCGTTATCCCACACCGCA.....................................................................................................................................................................................2412.002000000000000000000000010000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................ATAACAACAACAATGAACCGGA------------T...................................................2312.002001100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CAACAATGAACCGGA------------TGGCGCCT............................................2311.001000000000000000000000000000000000000000000000000000000000010000
.....................................................................................................................................................................ATCCACAGGGCC--AGG----------CCGCC---GGCGA................................................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AACAACAATGAACCGGA------------TGGC................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GGCGAGCAGAACAACAACAACA...............................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................ACAGCATCCACAGGGCC--AG........................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ATGAACCGGA------------TGGCGCCTAC---TTGCC..................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AACAACAACAATGAACCGGA------------TGG.................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................GCCGCGCGCCTCCAAGTACGCAC...........................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................GCCTCCAAGTACGCACAG.........................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AACAACAATGAACCGGA------------TGGCGCC.............................................2411.001000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................ATAACAACAACAATGAACCGGA------------TGGCGCC.............................................2911.001000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................TCCACAGGGCC--AGG----------CCGCC---GGCGAGCA.............................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................AACAACAACAATGAACCGGA------------TGGCGC..............................................2611.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATCCACAGGGCC--AGG----------CCGCC---GGCGAGC..............................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................GCAGTCGCCGCGCGCCTCCA....................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GGCGAGCAGAACAACAACAAC................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................GTTATCCCACACCGCAGTCGCCGCGCGC.........................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AACAATGAACCGGA------------TGGCGC..............................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TCACACCGCGTTATCCCACACC........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TCACACCGCGTTATCCCACACCGCA.....................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AGTCGCCGCGCGCCTCCAAGTACGCA............................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................CACCCAAATCCGGCCGCT...........1811.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................GGCC--AGG----------CCGCC---GGCGAGCAGAAC.........................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................AGTCGCCGCGCGCCTCCAA...................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AATGAACCGGA------------TGGCGCCT............................................1911.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATCCACAGGGCC--AGG----------CCGCC---GGC..................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CAACAATGAACCGGA------------TGG.................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................GGCGCCTAC---TTGCCCTCCTCACCCA.......................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................CACACCGCGTTATCCCACACCGCAGT...................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACAACAACAATGAACCGGA------------TGGC................................................2311.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................AAGTACGCACAGCATCCACAG................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GCAGTCGCCGCGCGCCTCCAAGTAC...............................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CACACCGCAGTCGCCGCGC...........................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................AGCATCCACAGGGCC--AGG----------CCGCC---GGC..................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAAATCCGGCCGCTATTCGCCCGT.2411.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................ATAACAACAACAATGAACCGGA------------TGGC................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................ACAACAACAATGAACCGGA------------TG..................................................2111.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................CTCCAAGTACGCACAGCATCCACAG................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................GGCGAGCAGAACAACAACAACAACA............................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................TCACACCGCGTTATCCCACA..........................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CAACAATGAACCGGA------------TGGCGC..............................................2111.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTGCCCTCCTCACCCAAATCCGGC...............2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CAAGTACGCACAGCATCCACA.................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................GGGCC--AGG----------CCGCC---GGCGAGC..............................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CACCGCAGTCGCCGCGCGCCTCCAA...................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................ACAGGGCC--AGG----------CCGCC---GGCGAGCAG............................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AACAACAATAATAACAACAACAAT........................................................................2450.201001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AACAACAACAACAATAATAACAACAACA..........................................................................28160.061000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GCAGAACAACAACAACAA..............................................................................................18180.061000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................ACAACAACAACAACAACAATA......................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------ATCCAATCACACCGCGTTATCCCACACCACAGTCGCCGCGTGCCTCCAAATATGCGCAGCATCCACAGTCCG--GCG----------ATGCC---AATGAGCAGAACAACAACAA------------------CAACAATGAGCCGGA------------TGGCTCCTAT---TTGCCTTCCTCGCCAAAATCTGGTCGCTACTCGCCTGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................GAACAACAACAA------------------CAACAATGAGC....................................................................2313.003200010
...............................................................................................................................................................................................................AGAACAACAACAA------------------CAACAATGAGCCGG.................................................................2712.002100001
..................................................................................................................................................................................................................ACAACAACAA------------------CAACAATGAGCCGGA------------TGG.................................................2812.002000002
..........................................................................................................................................................................................................................AA------------------CAACAATGAGCCGGA------------TGG.................................................2012.002100001
................................................................................................................................................................................................................GAACAACAACAA------------------CAACAATGAGCCGG.................................................................2612.002000002
.......................................................................................................................................................................................................................AACAA------------------CAACAATGAGCCGG.................................................................1912.002100001
............................................................................................................................................................................................................................................................A------------TGGCTCCTAT---TTGCCTTCCT.............................2111.001100000
...................................................................................................................................................................................................................................................................................................CAAAATCTGGTCGCTACTCGCCTGT.2511.001100000
.......................................................................................................................................................................................................................AACAA------------------CAACAATGAGCCGGA------------TGG.................................................2311.001000001
.................................................................................................................................................................................................................AACAACAACAA------------------CAACAATGAGCCGGA------------TG..................................................2811.001000001
................................................................................................................................................................................................ATGCC---AATGAGCAGAACAACAACAA------------------CA.............................................................................2711.001100000
......................................................................................................................................................CCAAATATGCGCAGCATCCACAGTCCG--GC........................................................................................................................................2911.001100000
.......................................................................................................................................................................CCACAGTCCG--GCG----------ATGCC---.....................................................................................................................1811.001100000
...............................................................................................................................................................................................................AGAACAACAACAA------------------CAACAATGAGC....................................................................2411.001100000
.....................................................................................................................................................TCCAAATATGCGCAGCATCC....................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................CGCCAAAATCTGGTCGCTACT........2111.001100000
.......................................................................................................................................................................CCACAGTCCG--GCG----------ATGCC---AATGAGCA.............................................................................................................2611.001100000
.................................................................................................................ACACCGCGTTATCCCACACCACA.....................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................CCACAGTCCG--GCG----------ATGCC---AATGAGC..............................................................................................................2511.001000001
...........................................................................................................................................................................................................GAGCAGAACAACAACAA------------------CAACAATGAGC....................................................................2811.001100000
.............................................................................................................................................CGCGTGCCTCCAAATATGCGCAGC........................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................CCTCGCCAAAATCTGGTCGCTACTCGCCT...2911.001100000
..........................................................................................................................................................................................................................................................GGA------------TGGCTCCTAT---TTGCCT.................................1911.001100000
............................................................................................................................................................................GTCCG--GCG----------ATGCC---AATGAGCAGAA..........................................................................................................2411.001000001
.........................................................................................................................................................................................................................................................CGGA------------TGGCTCCTAT---TTGCCTTCCTCGCC.........................2811.001100000
.........................................................................................................................................................................................................................................................................................................CTGGTCGCTACTCGCCTGT.1911.001100000
....................................................................................................................................................................................................................................................................................................AAAATCTGGTCGCTACTCGC.....2011.001100000
.....................................................................................................................................................................................G----------ATGCC---AATGAGCAGAACAACAACAA------------------CA.............................................................................2811.001100000
...........................................................................................................CCAATCACACCGCGTTATCCCAC...........................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................CCACAGTCCG--GCG----------ATGCC---AAT..................................................................................................................2111.001100000
................................................................................................................CACACCGCGTTATCCCACACCACAGTC..................................................................................................................................................................................2711.001000001
....................................................................................................................................................................................................................AACAACAA------------------CAACAATGAGCCGG.................................................................2211.001100000
..............................................................................................................................................................................................................CAGAACAACAACAA------------------CAACAATGAGC....................................................................2511.001100000
...............................................................................................................TCACACCGCGTTATCCCA............................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................ATCCACAGTCCG--GCG----------ATG..........................................................................................................................1811.001100000
.........................................................................................................................................................................................................................................................CGGA------------TGGCTCCTAT---TTGCCTTCCTCGCCA........................2911.001100000
......................................................................................................................................................................................................................................................................................................AATCTGGTCGCTACTCGCCTGT.2211.001000001
.............................................................................................................................CCCACACCACAGTCGCCG..............................................................................................................................................................................1811.001100000
........................................................................................................................GTTATCCCACACCACAGTCGCCGC.............................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................GCAGAACAACAACAA------------------CAAC...........................................................................19130.081100000
..................................................................................................................................................................................................................ACAACAACAA------------------CAACAATGAGC....................................................................21180.061100000
droGri2
---------------------------------------------------------------------------------------------------------ACCCAATCACACCGAGATATCCGACACCGCAGTCACCGCGTGCATCCAAATATGCACAGCATCCACAGG-----GCG----------ATGCT---GGCGAGCAGAACAACAACAACAATA------------ACAACAATGAACCCGA------------TGGAGCCTAT---TTGCCATCATCACCCAAGTCCGGTCGTTACTCGCCCGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................AGG-----GCG----------ATGCT---GGCGAGCAGAACA........................................................................................................2411.00110
...............................................................................................................................GACACCGCAGTCACCGCGTGCA........................................................................................................................................................................2211.00110
.................................................................................................................................................................................................................................................CAATGAACCCGA------------TGGAGC..............................................1811.00110
..............................................................................................................................................................................................................................................CAACAATGAACCCGA------------TGG.................................................1811.00110
............................................................................................................................................................ATGCACAGCATCCACAGG-----GCG----------TGC..........................................................................................................................2420.50101
....................................................................................................................................................................................................................AACAACAACAATA------------ACAACAAT........................................................................21200.05110

Generated: 05/18/2015 at 12:21 AM