ID:

dse_159

Coordinate:

scaffold_8:1727993-1728061 +

Confidence:

Known Ortholog

Class:

Testes-restricted

Genomic Locale:

intergenic

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.4 -27.8 -27.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAACCAATTCGAATATTCTTTCAGATTATATGACTTCAACGTATACTTTTCGGGGTTGGTGGTTGAACTTCGATTTTAGGTATTTAAATAAGATAAATCTGTTCATTCTTCGACCCAAAAAGTTCACGTGAAGAAGCAGCGAGCATCAAATGAGTGAATCAGGTAAACT

***********************************(((.(((..((((((..(((((((.((.(((((...(((((....(((....)))....))))).))))).)).))))))).))))))..))))))..************************************
Read size # Mismatch Hit Count Total Norm Total V113

male body
M054

female body

V114

embryo

V115

head

................................................................................................ATCTGTTCATTCTTCGACCCA.................................................... 21 0 1 6.00 6 1 4 1 0
................................................................................................ATCTGTTCATTCTTCGACCCAA................................................... 22 0 1 6.00 6 3 0 1 2
.................................................................................................TCTGTTCATTCTTCGACCCAA................................................... 21 0 1 3.00 3 2 0 1 0
................................................................................................ATCTGTTCATTCTTCGACCCAAA.................................................. 23 0 1 2.00 2 1 1 0 0
.................................................................................................TCTGTTCATTCTTCGACCCAAA.................................................. 22 0 1 2.00 2 0 1 1 0
.................................................................................................TCTGTTCATTCTTCGACCC..................................................... 19 0 1 2.00 2 0 2 0 0
................................................................................................ATCTGTTCATTCTTCGACCCAC................................................... 22 1 1 1.00 1 0 1 0 0
...................................................GGGGTTGGTGGTTGAACTTCGA................................................................................................ 22 0 1 1.00 1 1 0 0 0
..................................................CGGGGTTGGTGGTTGAACTTCGATT.............................................................................................. 25 0 1 1.00 1 0 0 1 0
................................................TTCGGGGTCGGTGGTTCAA...................................................................................................... 19 2 1 1.00 1 1 0 0 0
...................................................GGGGTTGGTGGTTGAACTTCG................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................................................................................................TCTTTTCATTCTTCGACCCAA................................................... 21 1 1 1.00 1 0 1 0 0
.....................................................................................................TTCATTCTTCGACCCAAAAAGT.............................................. 22 0 1 1.00 1 1 0 0 0
..................................................................................................TCTTTCATTCTTCGACCCAAA.................................................. 21 3 8 0.13 1 0 1 0 0
.................................................................................ATTTACATAAGCTAAGTCTG.................................................................... 20 3 13 0.08 1 0 1 0 0

Anti-sense strand reads

TTTGGTTAAGCTTATAAGAAAGTCTAATATACTGAAGTTGCATATGAAAAGCCCCAACCACCAACTTGAAGCTAAAATCCATAAATTTATTCTATTTAGACAAGTAAGAAGCTGGGTTTTTCAAGTGCACTTCTTCGTCGCTCGTAGTTTACTCACTTAGTCCATTTGA

************************************(((.(((..((((((..(((((((.((.(((((...(((((....(((....)))....))))).))))).)).))))))).))))))..))))))..***********************************
Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_8:1727943-1728111 + dse_159 candidate-rescued AAACCAATTCGAATATTCTTTCAG----------------------------------------------------------------ATTAT--A--TGACT---TCAACGTATACTTTTCGGGGTTGGTGGTTGAACTTCGATTTTAGGT--A--------TT--TAAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAGC----------------------ATCAAATGAGTGAAT-------------------C--A-----------------------G--------GTAAACT
droSim2 x:18334895-18335059 + dsi_170 confident AA-CCAATTCAAATATTCTTTCAG----------------------------------------------------------------ATTAT--A--TGACT---TTAACGTATACTTTTCCGGGTTGGTGGTTGAACTTCGATTTTAAGC--A--------TT--TAAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAAC----------------------ATCAAATGTGTGAAT-------------------------------------------------------GTAAACT
dm3 chrX:19445490-19445710 + dme-mir-973 Known_mirbase AAACCAATTCGAATATTCTTTGTG---------------------ATTTTGCGCTAAACATCTGCTT-----------TTAACATCAGAATAT--ACTTCACTTTACCGTCGTCGACTTTTCGTGGTTGGTGGTTGAACTTCGATTTTAAGT--A--------TT--TAAATAAAATGAAATCTGTTCATTCTCCGACACAAGAAGTTCAC-GCAAAGGAGCTGCAGCT---------------GCGAAC-ATCAAATGCGTGAAT-----------------C-------------C--------------CAGGTCCAGGTAAGCT
droEre2 scaffold_4690:9682227-9682451 + der_78 confident AAACCAAAGCGA----------GGCCTAACTAATTTATGTGTAATATTTTACACAGTA------CTTTCCTTAATCTATATAAATCAGACTAT--A--CCATT---TTAACGTCGACTTTTCGTGGTTGGTGGCTGAACTTAGATTTTGAGT--A--------TT--CAAATAAAA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTGCAGGAGCGGCAAAC----------------------ATGAATCGAGTGAAT-----------------C-------------A--------------GGAAAACAGAACCACT
droEug1 scf7180000409109:6814-7005 - AAACCAAAAGTCAAACTTTTATAA----------------------------------------------------------------ATCATTAA--AGATT---CCAACGACGACTTCTCGTGTTTGGTGACTGAACTTGGATTTTGAAT--A--------TT--TAAATAAAA-TAAATCTGTTCAATCCTCAACACGAGAAGTCGAC-GTAAATGACCAGCAAAC----------------------ATAAATAAGGTGATAGTGCTTAAAACTAAAA-C----------------------A--------TAATAATTAAGAT
droBia1 scf7180000302069:1157441-1157584 - AT---------------------------------------------------------------------------------------------T--TGATG---TTAACGCCGACTTTAGGTGTTTGGTGGCTGAACTTGGATTTTTAAC--A--------GT--TGAATGTAT-TAAATCTGTTCATTCCTCAACACAAAAAGTTGAC-GTTAAGGCCCAGCATAA----------------------A-AAACAGAGTGATG--------A--------GAC--A-----------------------A--------GGCAATA
droTak1 scf7180000415169:850700-850858 - AAAT----------ATTATTAAAG----------------------------------------------------------------T------T--TAATT---TTAACGTCGACTTTTCGTGTTTGGGGGCTGAACTCTGATTTTTAAT--A--------AT--TGAATTAAG-TAAATCTGTTCATTCCTCGACACAAGAAGTTGGC-GTAAAGTAACAGCGCAT----------------------ACAAATTGAGTGAT------------------A----------------------ATAATTT--------GGAACTT
droEle1 scf7180000490751:1106860-1107005 + ATAGT-----------------------------------------------------------------------------------------------------ATGACATCGACTTTTTGTGTTTGGCGGATGAACTTAGATTTTTCTT--A--------TT--TGTA-AAAA-CAAATCTGTTCATTCCTCGACGCAAAAAGTTGATTGTTAAAAACCAGCACAC----------------------TCAAATGGAGCAAA------------------A-------------A--------------AAAATACGGGCTGACT
droRho1 scf7180000761121:198697-198828 - A------------------------------------------------------------------------------------------------------------ACATCGACTTCTCGTGTTTGGCGTCTGAACTCAGATTCTTAAC--A--------GT--TGTGTTAAATAAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTTAAG-ACCAGCATAC----------------------TCAACTGAAGAGAA------------------A----------------------ACA------------ACGAGCT
droFic1 scf7180000454073:1723908-1724070 + AT--CAGTTTAAACAATTTGGAAA----------------------------------------------------------------AATAC--A--AAACG---GTGACATTGACATCTCGTGTTTGGCGAATGAGCTCGGATTTTTGTA--GTA------TT--TGAATAAGA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAA-GTTGATAATCAACTAAA----------------------ACAAAGTG----CT-----------------------A-----------------------A--------GGATACG
droKik1 scf7180000302517:1176220-1176360 + A-------------------------------------------------------------------------------------------------------------------CTTTTCGTGCTTGGCGATTGAAGGTGGATTTGTGAT--T--------TT--TAAGC-AAT-TAAATCTGTTCAATCGTCAACACTAAAAGTTGAT-GTTATTTAGCTTCGAACCCCAAGGATCC-TG--------------------------CCTAGAACGGTGAGT----------------------A--------TAGCCGGGACATC
droAna3 scaffold_13417:2478612-2478743 - dan_104 confident A-------------------------------------------------------------------------------------------------------------------CTCCTCGTGTTTGGCGATTGAACCTGGATTTTTAAT--T--------TT--CGAGTACGA-GAAATCTGTTCATTCCTCGACACTAGTAGTTGGC-GCGACA-CTCAGCGCAC----------C-AAA------CATGAACCGCG--------GCTCAAAT--------C--A-----------------------A--------TCCAATC
droBip1 scf7180000395874:49635-49787 - A-------------------------------------------------------------------------------------------------------------------CTTCTCGTGTTAGGCGATTGAACCTGGATTT-AAAT--T--------TT--CGAGTACGA-GAAATCTGTTCAATCCTCGACACTAGCAGTTGGC-GCGACCGA-CTGCGCAT---------------AAAAA-CATTATTCGCG--------CCTCATAT--------CCCGAACCAATCGCGGTTGCAATC------------CTTGGGT
droWil2 scf2_1100000004909:7946469-7946612 + T----------------------------------------------------------------------------------------------------------CGACATGGCCTTTTCGTGTTTGGTGATTGAACTTGGATTTTGT-TCTATATACATATATAAAAAT-ATG-TAAATCTGTTCATTCCTCGACACTAGAAGTTCAT-GTCAATAA-CTTCATTT---------CCT---GCACAC-AAGAAAAGC------------------------------------------------------------GAATCATT
droVir3 scaffold_13042:918331-918433 - dvi-mir-973 Known_mirbase A-------------------------------------------------------------------------------------------------------------CATTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTTTT--A--------TA--T-----ACA-CAAATCTGTTCATTCCTCGACACTAGAAGTTTGC-GTCAATAAGCTGCCAAT----------------------AT---------------------------------------------------------------------------
droMoj3 scaffold_6328:2909104-2909205 - dmo_112 confident ----------------------------------------------------------------------------------------------------------TCGGCTTTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTAAA--A--------TA--TGA---AAA-GAAATCTGTTCATTCCTCGACACTAAGAGTTTAG-GTCTATAAACAAC-------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AAACCAATTCGAATATTCTTTCAG----------------------------------------------------------------ATTAT--A--TGACT---TCAACGTATACTTTTCGGGGTTGGTGGTTGAACTTCGATTTTAGGT--A--------TT--TAAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAGC----------------------ATCAAATGAGTGAAT-------------------C--A-----------------------G--------GTAAACTSizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCA...............................................................................................................................2116.0064110
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAA..............................................................................................................................2216.0060312
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAA..............................................................................................................................2113.0030210
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAA.............................................................................................................................2312.0021100
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAA.............................................................................................................................2212.0021010
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCC................................................................................................................................1912.0022000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAC..............................................................................................................................2211.0011000
..........................................................................................................................GGGGTTGGTGGTTGAACTTCGA........................................................................................................................................................................................2211.0010100
.........................................................................................................................CGGGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................2511.0010010
..........................................................................................................................GGGGTTGGTGGTTGAACTTCG.........................................................................................................................................................................................2111.0010100
.........................................................................................................................................................................................TTCATTCTTCGACCCAAAAAGT.........................................................................................................................2211.0010100
droSim2
AA-CCAATTCAAATATTCTTTCAG----------------------------------------------------------------ATTAT--A--TGACT---TTAACGTATACTTTTCCGGGTTGGTGGTTGAACTTCGATTTTAAGC--A--------TT--TAAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAAC----------------------ATCAAATGTGTGAAT-------------------------------------------------------GTAAACTSizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAA..............................................................................................................................211910.009107200006788021200012000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAA.............................................................................................................................221484.004843272101821401300017000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCA...............................................................................................................................211419.004190150128140000100117000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAA..............................................................................................................................221360.0036007002586001100087000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCC................................................................................................................................191223.002231900208500000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCA...............................................................................................................................201216.00216176600132100000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCCA...............................................................................................................................221140.0014001200450111000080000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAA.............................................................................................................................231128.001280500881100000033000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCC................................................................................................................................201111.001110300102300000003000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACC.................................................................................................................................18144.0044360035000000000000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACC.................................................................................................................................19133.0033120030000000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCC................................................................................................................................21128.00281110012000000004000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAAA............................................................................................................................23127.00270120014000000001000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAA..............................................................................................................................23111.001102004000000005000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACC.................................................................................................................................20110.001001006000000003000
....................................................................................................................................................................................ATCTGTTCATTCTTCGAC..................................................................................................................................1819.00900009000000000000
.........................................................................................................................CCGGGTTGGTGGTTGAACTTCGATTT.....................................................................................................................................................................................2617.00700006000000001000
......................................................................................................................................................................................CTGTTCATTCTTCGACCCAA..............................................................................................................................2017.00701006000000000000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAT..............................................................................................................................2217.00700000000000007000
.........................................................................................................................CCGGGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2416.00600006000000000000
......................................................................................................................................................................................CTGTTCATTCTTCGACCCA...............................................................................................................................1916.00600006000000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCCT...............................................................................................................................2215.00502200000000001000
...................................................................................................................................................................................AATCTGTTCATTCTTCGAC..................................................................................................................................1915.00502002000000001000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAC..............................................................................................................................2215.00500000000000005000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAG..............................................................................................................................2114.00404000000000000000
.........................................................................................................................CCGGGTTGGTGGTTGAACTTC..........................................................................................................................................................................................2114.00400003000000001000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAAA............................................................................................................................2414.00400004000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCG...............................................................................................................................2013.00303000000000000000
.........................................................................................................................CCGGGTTGGTGGTTGAACTTCG.........................................................................................................................................................................................2213.00300001010000001000
...................................................................................................................................................TAAGC--A--------TT--TAAATAAGA-TAA....................................................................................................................................................2012.00200002000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAT.............................................................................................................................2212.00202000000000000000
......................................................................................................................................................................................CTGTTCATTCTTCGACCCAAA.............................................................................................................................2112.00200002000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCACC.............................................................................................................................2212.00202000000000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGA...................................................................................................................................1812.00200002000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCT...............................................................................................................................2012.00202000000000000000
.........................................................................................................................CCGGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................2512.00200001000000001000
......................................................................................................................................................................................CTGTTCATTCTTCGACCC................................................................................................................................1812.00200002000000000000
.........................................................................................................................................................................................TTCATTCTTCGACCCAAA.............................................................................................................................1811.00100001000000000000
...........................................................................................................................GGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................2311.00100001000000000000
....................................................................................................................................................................................ATCTGTTCATTCTTCGACCCT...............................................................................................................................2111.00101000000000000000
.........................................................................................................................CCGGGTTGGTGGTTGAAC.............................................................................................................................................................................................1811.00100001000000000000
........................................................................................................................TCCGGGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2511.00100001000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGAC..................................................................................................................................1711.00100000000000001000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAG.............................................................................................................................2211.00101000000000000000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCAC..............................................................................................................................2111.00101000000000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAT..............................................................................................................................2311.00100000000000001000
........................................................................................................................................................................................GTTCATTCTTCGACCCAA..............................................................................................................................1811.00100001000000000000
...................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAAA.............................................................................................................................2411.00100000000000001000
.....................................................................................................................................................................................TCTGTTCATTCTTCGACCCATTT............................................................................................................................2320.50101000000000000000
dm3
AAACCAATTCGAATATTCTTTGTG---------------------ATTTTGCGCTAAACATCTGCTT-----------TTAACATCAGAATAT--ACTTCACTTTACCGTCGTCGACTTTTCGTGGTTGGTGGTTGAACTTCGATTTTAAGT--A--------TT--TAAATAAAATGAAATCTGTTCATTCTCCGACACAAGAAGTTCAC-GCAAAGGAGCTGCAGCT---------------GCGAAC-ATCAAATGCGTGAAT-----------------C-------------C--------------CAGGTCCAGGTAAGCTSizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
...........................................................................................................................TGGTTGGTGGTTGAACTTCGA........................................................................................................................................................................................21126299.0026299000001000002000000000001200000000000000100000100000000000000000000000000000000000040000062020021204722137800284202611010000000000000100000000000000000000050000000000000000100003200000000000011500472000013304970000000000000000059100110100000000000000000200150020027101000000110593101000000000000900002000111030010041185104000403816733601070178131110014200568171230
...........................................................................................................................TGGTTGGTGGTTGAACTTCG.........................................................................................................................................................................................20110374.00103740000000000000000000000030200000000000000100000000000000000000000000000000000000000000000002003007000001000000000001000000000000000000000000000000000000000000000000000000000000000100000001840455000011403920000000000010000015110000000000000000000000000100600000100000090502100001020000000900112111019010000052012011000011306828201010670219721241541212941100
...........................................................................................................................TGGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2216869.0068690000000000020000000000010000000000000001030010000010000000000000000000000000000000000000100200110024003001000022021000000000000000001000000000000000000003000000000000000000000000000000000000342140000023010800000000000000000220000002000000000000000000007004001010000000401720000000000000005000000001401000004018600020434288300010500002700000418331230
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................2314683.0046830000000000010000000000010000000000000000100000000000000000000000000000000000000000000000102001800100000000000100160105000000000000000000000000000000000000000000000000000000000100000000000003405900001607200000000000000000100000002000000000000000000003003001010000000307400000001000000010000000004010000020890000000273920001039010130000031526060
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTT....................................................................................................................................................................................2514653.0046530000000100012000000000000000000000000000000000000100000000000000000000000000000000101431010071110711191003002030140764301200000000000000000000000000000000000000000000000000010000000000000000000460800000908700000000000000000000012024230000000000000000005005011000000000116400000002000000060000000101000000030880001000298220000021000140000011000080
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTT.....................................................................................................................................................................................2412079.00207900000000000100000010000000000000000000000000000000000000000000000000000000000000000400000000124001400020100002002100020000000000000000000000000000000000000000000000000000000000000000000000021042000020400000000000000000000000000300000000000000000000200100001000000000310000000000000001000000001200000002053000000012884000001701012100000520060
...................................................................................................................................................................................AATCTGTTCATTCTCCGACACA...............................................................................................................................221280.0028000000100000000000000000130000000000000000101000000000000000000000000000000000000000000000001003003000100000000010000000000000000010000000000000000000020000000000000000001000300000200000006011000030700000020000000000010000024311100000000000000002002000000000000408500000001000000000000000102000000010000000000560000000000000000048020
.........................................................................................................................CGTGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................251277.00277000000001000000000000000000000000000000000000000000000000000000000000000000000000003000000000300000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000012370000002000000000023010
...........................................................................................................................TGGTTGGTGGTTGAACTTCGT........................................................................................................................................................................................211234.002340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000204000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000001100000001060000002010201000098000
........................................................................................................TACCGTCGTCGACTTTTCG.............................................................................................................................................................................................................191129.00129000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000003500000000000000010000000200000000000000001000621000001000000000019000
.....................................................................................................................................................................................TCTGTTCATTCTCCGACACAAG.............................................................................................................................221110.0011000000000100100000000000500000000000000000000000000000000000000000000000000000000010020000000050030001010000000601020000000000000000000000000000000000000000000000000001000001010000000000050500003030000000000000000000000201101000000000000000000100000000000000000310000000000000000000000000000000000000000000018000000000000000007000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGAA.......................................................................................................................................................................................22197.009700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000030000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000410000001000000000147000
...................................................................................................................................................................................AATCTGTTCATTCTCCGACA.................................................................................................................................20190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000010000000000000000000000000000000000000000000000000100000000000000360000000100000000000000000000000000000000000060000000000000000043000
.....................................................................................................................................................................................TCTGTTCATTCTCCGACACAAGT............................................................................................................................23172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000010190000000000000000000000000000000000000000000040000000000000000008000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTT...................................................................................................................................................................................26166.006600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010400000030000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000370000000000000000015010
.......................................................................................................TTACCGTCGTCGACTTTTCG.............................................................................................................................................................................................................20165.00650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000001000000000000000055000000000000000001000
...........................................................................................................................TGGTTGGTGGTTGAACTTC..........................................................................................................................................................................................19154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000010000000000000000000000000000000000000000000000000000000000000000400000000000000000000001000000000000010000000170000001000000000022000
.....................................................................................................................................................................................TCTGTTCATTCTCCGACACA...............................................................................................................................20153.005300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000100000000000000000000000000000000100000000000000001000000000000000000060100000000000000000000000000000000000000000000000000000000000000000000000270000000000000000000000000000000000000000000030000000000000000011000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGC........................................................................................................................................................................................21150.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010100000010000000000000000000000000000000000000000000000000000001000000000400000000000000000000000000000000000200000000170000000010001000019000
.....................................................................................................................................................................................TCTGTTCATTCTCCGACACAA..............................................................................................................................21147.00470000000000000000000000030000000000000000000000000000000000000000000000000000000000005000001001000000000000000010000010000000000000000000000000000000000000000000000000000000001000000000022010000103000000000000000000000000000000000000000000000010000110000000000015000000000000000000000000000000000100000000002000000000000000004000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGG........................................................................................................................................................................................21137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000200000000000000000000000000000000000100000000190000000000000000014000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTATC.................................................................................................................................................................................28136.003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCTCCGACACA...............................................................................................................................21127.00270000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000015000000000000000000000000000000000000000000003000000000000000006000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATA......................................................................................................................................................................................23125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000013000
......................................................................................................TTTACCGTCGTCGACTTTTCG.............................................................................................................................................................................................................21122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000019000000000000000000000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATC......................................................................................................................................................................................23121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000011000
...................................................................................................................................................................................AATCTGTTCATTCTCCGACAC................................................................................................................................21118.0018000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000005000000000000000000000000000000000000000000005000000000000000004000
...........................................................................................................................TGGTTGGTGGTTGAACTTCT.........................................................................................................................................................................................20117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000300000002000000000010010004000
....................................................................................................................................................................................ATCTGTTCATTCTCCGACACAA..............................................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000200000010000000000000000000000000001000000000000000000000000000000000000006000000000000000000000000000000000000000000004000000000000000001000
..........................................................................................................................GTGGTTGGTGGTTGAACTTCGATTT.....................................................................................................................................................................................25115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTA.....................................................................................................................................................................................24113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000001000
...................................................................................................................................................................................AATCTGTTCATTCTCCGAC..................................................................................................................................19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................GTGGTTGGTGGTTGAACTTCGA........................................................................................................................................................................................22112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000
............................................................................................................................GGTTGGTGGTTGAACTTCGA........................................................................................................................................................................................20111.0011000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000004000
..........................................................................................................................GTGGTTGGTGGTTGAACTTCGATT......................................................................................................................................................................................24110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000002000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGAC.......................................................................................................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000004000000100000000003000
...........................................................................................................................TGGTTGGTGGTTGAACTTCC.........................................................................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000006000000000000000000000
.........................................................................................................................CGTGGTTGGTGGTTGAACTTCGATTT.....................................................................................................................................................................................2619.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000
..........................................................................................................................GTGGTTGGTGGTTGAACTTCG.........................................................................................................................................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000003000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATG......................................................................................................................................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000007000
.....................................................................................................CTTTACCGTCGTCGACTTTTCG.............................................................................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000
...........................................................................................................................TGGTTGGTGGTTGAACTTCA.........................................................................................................................................................................................2018.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000001000
......................................................................................................................................................................................CTGTTCATTCTCCGACACAAGT............................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000006000000000000000001000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTA...................................................................................................................................................................................2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000005000000100000000001000
.........................................................................................................................CGTGGTTGGTGGTTGAACTTCGA........................................................................................................................................................................................2317.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000
...................................................................................................CACTTTACCGTCGTCGACTTTTCG.............................................................................................................................................................................................................2417.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000001000
............................................................................................................................GGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000003000
.............................................................................................................................GTTGGTGGTTGAACTTCGA........................................................................................................................................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTC....................................................................................................................................................................................2516.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
..........................................................................................................................GTGGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000001000
.........................................................................................................................CGTGGTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2416.006000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
.........................................................................................................................CGTGGTTGGTGGTTGAACTTCG.........................................................................................................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGAAA......................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000003000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTA....................................................................................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000002000
..............................................................................................................................TTGGTGGTTGAACTTCGATTTT....................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000100000000001000
............................................................................................................................GGTTGGTGGTTGAACTTCGATTTT....................................................................................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
...........................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTTT..................................................................................................................................................................................2715.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000003000
...........................................................................................................................TGGTTGGTGGTTGAACTT...........................................................................................................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000003000
.............................................................................................................................GTTGGTGGTTGAACTTCGAT.......................................................................................................................................................................................2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000004000000000000000000000
droEre2
AAACCAAAGCGA----------GGCCTAACTAATTTATGTGTAATATTTTACACAGTA------CTTTCCTTAATCTATATAAATCAGACTAT--A--CCATT---TTAACGTCGACTTTTCGTGGTTGGTGGCTGAACTTAGATTTTGAGT--A--------TT--CAAATAAAA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTGCAGGAGCGGCAAAC----------------------ATGAATCGAGTGAAT-----------------C-------------A--------------GGAAAACAGAACCACTSizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACAAGT............................................................................................................................23150.005010104350
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACAAG.............................................................................................................................22134.0034160101340
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACAA..............................................................................................................................21113.00135000620
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACA...............................................................................................................................2015.0050010310
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACAAG.............................................................................................................................2313.0032100000
.........................................................................................................................CGTGGTTGGTGGCTGAACTTAG.........................................................................................................................................................................................2212.0020000200
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACAAGT............................................................................................................................2412.0020000200
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACAAGC............................................................................................................................2311.0010000100
.........................................................................................................................CGTGGTTGGTGGCTGAACTTAGA........................................................................................................................................................................................2311.0010000010
.........................................................................................................................CGTGGTTGGTGGCTGAACTTAGATT......................................................................................................................................................................................2511.0010000100
.........................................................................................................................CGTGGTTGGTGGCTGAACTTAGAT.......................................................................................................................................................................................2411.0011000000
droEug1
AAACCAAAAGTCAAACTTTTATAA----------------------------------------------------------------ATCATTAA--AGATT---CCAACGACGACTTCTCGTGTTTGGTGACTGAACTTGGATTTTGAAT--A--------TT--TAAATAAAA-TAAATCTGTTCAATCCTCAACACGAGAAGTCGAC-GTAAATGACCAGCAAAC----------------------ATAAATAAGGTGATAGTGCTTAAAACTAAAA-C----------------------A--------TAATAATTAAGATSizeHit CountTotal NormTotal
No Reads
droBia1
AT---------------------------------------------------------------------------------------------T--TGATG---TTAACGCCGACTTTAGGTGTTTGGTGGCTGAACTTGGATTTTTAAC--A--------GT--TGAATGTAT-TAAATCTGTTCATTCCTCAACACAAAAAGTTGAC-GTTAAGGCCCAGCATAA----------------------A-AAACAGAGTGATG--------A--------GAC--A-----------------------A--------GGCAATASizeHit CountTotal NormTotal
No Reads
droTak1
AAAT----------ATTATTAAAG----------------------------------------------------------------T------T--TAATT---TTAACGTCGACTTTTCGTGTTTGGGGGCTGAACTCTGATTTTTAAT--A--------AT--TGAATTAAG-TAAATCTGTTCATTCCTCGACACAAGAAGTTGGC-GTAAAGTAACAGCGCAT----------------------ACAAATTGAGTGAT------------------A----------------------ATAATTT--------GGAACTTSizeHit CountTotal NormTotal
No Reads
droEle1
ATAGT-----------------------------------------------------------------------------------------------------ATGACATCGACTTTTTGTGTTTGGCGGATGAACTTAGATTTTTCTT--A--------TT--TGTA-AAAA-CAAATCTGTTCATTCCTCGACGCAAAAAGTTGATTGTTAAAAACCAGCACAC----------------------TCAAATGGAGCAAA------------------A-------------A--------------AAAATACGGGCTGACTSizeHit CountTotal NormTotal
No Reads
droRho1
A------------------------------------------------------------------------------------------------------------ACATCGACTTCTCGTGTTTGGCGTCTGAACTCAGATTCTTAAC--A--------GT--TGTGTTAAATAAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTTAAG-ACCAGCATAC----------------------TCAACTGAAGAGAA------------------A----------------------ACA------------ACGAGCTSizeHit CountTotal NormTotal
No Reads
droFic1
AT--CAGTTTAAACAATTTGGAAA----------------------------------------------------------------AATAC--A--AAACG---GTGACATTGACATCTCGTGTTTGGCGAATGAGCTCGGATTTTTGTA--GTA------TT--TGAATAAGA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAA-GTTGATAATCAACTAAA----------------------ACAAAGTG----CT-----------------------A-----------------------A--------GGATACGSizeHit CountTotal NormTotal
No Reads
droKik1
A-------------------------------------------------------------------------------------------------------------------CTTTTCGTGCTTGGCGATTGAAGGTGGATTTGTGAT--T--------TT--TAAGC-AAT-TAAATCTGTTCAATCGTCAACACTAAAAGTTGAT-GTTATTTAGCTTCGAACCCCAAGGATCC-TG--------------------------CCTAGAACGGTGAGT----------------------A--------TAGCCGGGACATCSizeHit CountTotal NormTotal
No Reads
droAna3
A-------------------------------------------------------------------------------------------------------------------CTCCTCGTGTTTGGCGATTGAACCTGGATTTTTAAT--T--------TT--CGAGTACGA-GAAATCTGTTCATTCCTCGACACTAGTAGTTGGC-GCGACA-CTCAGCGCAC----------C-AAA------CATGAACCGCG--------GCTCAAAT--------C--A-----------------------A--------TCCAATCSizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG.............................................................................................................................22170.00705700292
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAG.............................................................................................................................2118.008700100
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTA..............................................................................................................................2118.008400040
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT............................................................................................................................2316.006000042
.........................................................................................................................CGTGTTTGGCGATTGAACCTGG.........................................................................................................................................................................................2215.005000050
.........................................................................................................................CGTGTTTGGCGATTGAACCTGGATT......................................................................................................................................................................................2512.002100100
.........................................................................................................................CGTGTTTGGCGATTGAACCTGGAT.......................................................................................................................................................................................2412.002000020
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACT...............................................................................................................................2012.002100001
.........................................................................................................................CGTGTTTGGCGATTGAACCTGGAA.......................................................................................................................................................................................2411.001000010
.........................................................................................................................CGTGTTTGGCGATTGAACCTG..........................................................................................................................................................................................2111.001100000
...........................................................................................................................TGTTTGGCGATTGAACCTGGATT......................................................................................................................................................................................2311.001000010
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAGT............................................................................................................................2211.001000010
.........................................................................................................................CGTGTTTGGCGATTGAACCTGGT........................................................................................................................................................................................2311.001000010
........................................................................................................................................................................................GTTCATTCCTCGACACTAG.............................................................................................................................1911.001100000
.......................................................................................................................................................................................TGTTCATTCCTCGACACTAG.............................................................................................................................2011.001100000
...........................................................................................................................TGTTTGGCGATTGAACCTGGA........................................................................................................................................................................................2111.001000010
droBip1
A-------------------------------------------------------------------------------------------------------------------CTTCTCGTGTTAGGCGATTGAACCTGGATTT-AAAT--T--------TT--CGAGTACGA-GAAATCTGTTCAATCCTCGACACTAGCAGTTGGC-GCGACCGA-CTGCGCAT---------------AAAAA-CATTATTCGCG--------CCTCATAT--------CCCGAACCAATCGCGGTTGCAATC------------CTTGGGTSizeHit CountTotal NormTotal
No Reads
droWil2
T----------------------------------------------------------------------------------------------------------CGACATGGCCTTTTCGTGTTTGGTGATTGAACTTGGATTTTGT-TCTATATACATATATAAAAAT-ATG-TAAATCTGTTCATTCCTCGACACTAGAAGTTCAT-GTCAATAA-CTTCATTT---------CCT---GCACAC-AAGAAAAGC------------------------------------------------------------GAATCATTSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
.....................................................................................................................TTTTCGTGTTTGGTGATTGAACT............................................................................................................................................................................................23164.00643303001
.....................................................................................................................TTTTCGTGTTTGGTGATTGAAC.............................................................................................................................................................................................22130.0030102900
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG.............................................................................................................................22123.0023230000
.........................................................................................................................................................................................TTCATTCCTCGACACTAGAAGT.........................................................................................................................22120.0020002000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGA............................................................................................................................23113.0013130000
.....................................................................................................................TTTTCGTGTTTGGTGATTGAA..............................................................................................................................................................................................2119.00930600
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACT...............................................................................................................................2015.00550000
.....................................................................................................................TTTTCGTGTTTGGTGATTGA...............................................................................................................................................................................................2015.00500500
......................................................................................................................TTTCGTGTTTGGTGATTGAACT............................................................................................................................................................................................2212.00210100
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTA..............................................................................................................................2112.00210100
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGG............................................................................................................................2312.00220000
.........................................................................................................................CGTGTTTGGTGATTGAACTTGGATT......................................................................................................................................................................................2512.00200011
.....................................................................................................................TTTTCGTGTTTGGTGATTGAACTT...........................................................................................................................................................................................2412.00220000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGC............................................................................................................................2311.00110000
.........................................................................................................................CGTGTTTGGTGATTGAACTTGGATC......................................................................................................................................................................................2511.00100100
.........................................................................................................................................................................................TTCATTCCTCGACACTAGAAGTT........................................................................................................................2311.00100100
.....................................................................................................................................................................................TCTGTTCATTCCTCGACAC................................................................................................................................1911.00110000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT............................................................................................................................2311.00110000
.........................................................................................................................................................................................TTCATTCCTCGACACTAGAAG..........................................................................................................................2111.00110000
droVir3
A-------------------------------------------------------------------------------------------------------------CATTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTTTT--A--------TA--T-----ACA-CAAATCTGTTCATTCCTCGACACTAGAAGTTTGC-GTCAATAAGCTGCCAAT----------------------AT---------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG.............................................................................................................................22118038.00180382763237507201020000100010174000136876206363715255156314831132305000000000010000008011120142433043264316232400000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAG.............................................................................................................................2319342.009342130536037000000001001007310050343430181483828330630210010100000000000000000200070420101881213401000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACT...............................................................................................................................2116136.006136123224505405010000000010702145125171611935961722199100001900000001000100001017100900571182544024432120111
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACT...............................................................................................................................2012777.0027772479321028010100001010105910212015385122516941540100092000000000000000004000100095244422624354522041
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTA..............................................................................................................................2112749.0027492413611210100000030000025001211084954029979901800000670100000000000000050002004280132706500112
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTA..............................................................................................................................2211940.0019401015103000000000000201800000016843961915510200021028000000000000000003000100168003101010010
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTC...........................................................................................................................241954.0095448000122000100000000006300000002041656323904900000850000000000000000000001000000030100000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACAC................................................................................................................................201407.004072090000200000000000030000000127864111303000005000000000000000000000000101006500002010
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT............................................................................................................................231328.0032830000203000000000000190000010927215740180000027000000000000000000000000000000011000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAG.............................................................................................................................211285.00285002700400000000000000100000008466148502000001000000000000000000000000100000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACA.................................................................................................................................191278.002782070000100000000000030002701575817430500001000000000000000000000000001001417111313500000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTC...........................................................................................................................251242.0024200100300000000000000130000000664317580130000023000000000000000000000500000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGA............................................................................................................................231163.0016352130000000000000000000000010231652600001000000000000000000000000001000059837200000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTT..............................................................................................................................221162.0016200000200000000000000100000005631165000000004000000000000000000000000200000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTT.....................................................................................................................................................................................261137.0013700100702000000000000400000004722123503000003000000000000000000000100000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCC..........................................................................................................................251130.0013059010000000000000000050000000111172204000008000000000000000000000000000010100000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGT............................................................................................................................241126.0012600100003010000000000700000004622621030000016000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATT......................................................................................................................................................................................251109.0010900000151503000000000011000000024981508000018000000000000000000000000000000001000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGG.........................................................................................................................................................................................22189.00890000230301000000000040000000331521703000006000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACAC................................................................................................................................19182.00827050000000000000000000000000221471303000002000000000000000000000000001011005000010
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTC..............................................................................................................................22174.00740040010000000000000010000000177122203000004000000000000000000000000000002100000000
.......................................................................................................................................................................................TGTTCATTCCTCGACACTAG.............................................................................................................................20169.00690000000000000000000000000000221282601000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCT..........................................................................................................................25160.0060150000300000000000000200000001693502000005000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGA........................................................................................................................................................................................23152.005200000501010000000000500001009104803000005000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAT.............................................................................................................................23147.0047000000000000000000000000000014581901000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGAT.......................................................................................................................................................................................24145.00450000020002000000000020000010795903000005000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACC...............................................................................................................................20143.004338100000000000000000000000000020000000000000000000000000000000000000000100100000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACA.................................................................................................................................18141.004140000000000000000000100000005126902000002000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGA............................................................................................................................24138.00380000000000000000000000000000121041000000000000000000000000000000000000020000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTC..............................................................................................................................21136.00361020000000000000000010000000583403000007000000000000000000000000000000110000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAT.............................................................................................................................22135.003500000000000000000000000001001553901000001000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTA..............................................................................................................................20132.00320060000000000000000000000000972800000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACT...............................................................................................................................19132.00321050000000000000000000000000943800000000000000000000000000000000000000000200000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACC...............................................................................................................................21130.003010001000000000000000000000000322501000000000000000000000000000000000010023000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTC....................................................................................................................................................................................27129.002900000200000000000000000000007103401000002000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATC......................................................................................................................................................................................25125.00250000020000000000000000000000534700000002000000000000000000000000000020000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAA.............................................................................................................................23124.002400000000000000000000000000006521100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTT...........................................................................................................................24122.00220000000000000000000000000000534901000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAA.............................................................................................................................22122.00220030000000000000000000000001215501000000000000000000000000000000011000100000001
.......................................................................................................................................................................................TGTTCATTCCTCGACACT...............................................................................................................................18116.00160000000000000000000000000000662100000001000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTG..........................................................................................................................................................................................21116.00160000010202000000000020000000340200000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGAC..................................................................................................................................18116.00161000000000000000000000000000010400000001000000000000000000000000000012311100000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTCC..........................................................................................................................26115.00151000010000000000000000000000301900000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTT.............................................................................................................................23114.00140000000000000000000000000000432500000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTT..............................................................................................................................21114.00140000000000000000000000000000522500000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTTCATTCCTCGACACTAG.............................................................................................................................19114.00140000000000000000000020000000621300000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGG............................................................................................................................23113.001311000000000000000000000000000110000000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTCC...................................................................................................................................................................................28112.00121000030000000000000000000000201400000001000000000000000000000000000000000000000
.......................................................................................................................................................................................TGTTCATTCCTCGACACTA..............................................................................................................................19112.00120000000000000000000000000000313301000000000000000000000000000100000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACG...............................................................................................................................20111.001110010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACC.................................................................................................................................19110.00100010000000000000000000000000041102000001000000000000000000000000000000000000000
.........................................................................................................................................................................................TTCATTCCTCGACACTAG.............................................................................................................................18110.00100000020000000000000000000000211102000001000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAGTC...........................................................................................................................23110.00100000000001000000000000000000211102000001000000000000000000000100000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCA..........................................................................................................................2519.0095000000000000000000000000000111100000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAC.............................................................................................................................2319.0090001000000000000000010000000201400000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACT.................................................................................................................................1918.0080000000000000000000000000000020100000000000000000000000000000000000010103000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTCT..........................................................................................................................2618.0080000000000000000000020000000111300000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACA...............................................................................................................................2117.0070000000000000000000000000000101300000000000000000000000000000000010001000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTTC..........................................................................................................................2517.0071000010000000000000000000000111200000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGC............................................................................................................................2316.0061000000000000000000000000000010200000002000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTTC..........................................................................................................................2616.0060000000000000000000000000000021300000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGCC...........................................................................................................................2415.0051000000000000000000000000000110100000001000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACAA................................................................................................................................2015.0050010000000000000000000000200000000000000000000000000000000000000001000000100000
.......................................................................................................................................................................................TGTTCATTCCTCGACACTAGTC...........................................................................................................................2215.0050000010000000000000000000000020000000002000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTT...........................................................................................................................2515.0050000000000000000000010000000110200000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACAAA...............................................................................................................................2115.0050000000000000000000000001000000000000000000000000000000000000000000004000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTC.....................................................................................................................................................................................2615.0050010010000000000000000000000100100000001000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAC.............................................................................................................................2214.0040000000000000000000000000000000400000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACTAG...............................................................................................................................2114.0040000000000000000000000000000011200000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTC.............................................................................................................................2314.0040000000000000000000000000000013000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGAA...........................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000010010001000001
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTCT.............................................................................................................................2314.0040000000000000000000010000000200100000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACT............................................................................................................................................................................................1914.0041000000001000000000000000000000001000001000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAGT............................................................................................................................2214.0040000000000000000000000000000001101000001000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGAAA..........................................................................................................................2514.0040010000000000000000000000000000000000000000000000000000000000000001000002000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTG..............................................................................................................................2113.0032000000000000000000000000000000000000000000000000000000000000000010000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACA...............................................................................................................................2013.0030000000000000000000000000000000200000000000000000000000000000000000010000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTATC............................................................................................................................2413.0030000000000000000000000000000100200000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTTCATTCCTCGACACTAGTC...........................................................................................................................2113.0030000010000000000000010000000000001000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTT...........................................................................................................................................................................................2013.0030000010000000000000000000000110000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACC.................................................................................................................................1813.0033000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTCC.............................................................................................................................2312.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGATC..........................................................................................................................2512.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTATTC...........................................................................................................................2512.0020000000000000000000000000000200000000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAAC.............................................................................................................................................................................................1812.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACG...............................................................................................................................2112.0022000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTA....................................................................................................................................................................................2712.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGACT..........................................................................................................................2512.0020000000000000000000000000000000100000000000000000000000000000000000010000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGCT...........................................................................................................................2412.0020000020000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAGA............................................................................................................................2212.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGCT...........................................................................................................................2512.0020000000000000000000000000000010000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACTAG...............................................................................................................................2051.4070000000000000000000000000000410200000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTTT............................................................................................................................2411.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAA.............................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGAC...........................................................................................................................2511.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------TCGGCTTTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTAAA--A--------TA--TGA---AAA-GAAATCTGTTCATTCCTCGACACTAAGAGTTTAG-GTCTATAAACAAC-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTA..............................................................................................................................21148.004833000114
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAA.............................................................................................................................22127.00272300004
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACT...............................................................................................................................20117.00171101005
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAT.............................................................................................................................2218.008400013
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACT...............................................................................................................................2116.006300012
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAA.............................................................................................................................2316.006401010
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTT.....................................................................................................................................................................................2615.005100004
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATT......................................................................................................................................................................................2515.005100013
....................................................................................................................................................................................ATCTGTTCATTCCTCGACACTA..............................................................................................................................2215.005300011
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATC......................................................................................................................................................................................2513.003100002
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTAAT............................................................................................................................2313.003101001
......................................................................................................................................................................................CTGTTCATTCCTCGACACT...............................................................................................................................1912.002200000
......................................................................................................................................................................................CTGTTCATTCCTCGACACTA..............................................................................................................................2012.002200000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTT..............................................................................................................................2112.002200000
....................................................................................................................................................................................ATCTGTTCATTCCTCGACA.................................................................................................................................1911.001100000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTTC...................................................................................................................................................................................2811.001000001
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTC....................................................................................................................................................................................2711.001000001
....................................................................................................................................................................................ATCTGTTCATTCCTCGACAC................................................................................................................................2011.001000010
......................................................................................................................................................................................CTGTTCATTCCTCGACACTAA.............................................................................................................................2111.001100000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACC...............................................................................................................................2011.001000010
........................................................................................................................................................................................GTTCATTCCTCGACACTA..............................................................................................................................1811.001100000
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTC..............................................................................................................................2111.001100000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTCCC..................................................................................................................................................................................2911.001000001
.....................................................................................................................................................................................TCTGTTCATTCCTCGACACTACC............................................................................................................................2311.001000001
......................................................................................................................................................................................CTGTTCATTCCTCGACACTATC............................................................................................................................2211.001100000
.........................................................................................................................CGTGTTCGATGTTTGAACTTGGATTC.....................................................................................................................................................................................2611.001000001

Generated: 10/20/2015 at 07:47 PM