ID:

dse_1497

 Coordinate:

scaffold_60:26716-26866 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -32.3 -32.2

Flybase annnotation

CDS [Dsec\GM13622-cds]; exon [dsec_GLEANR_14351:6]; intron [Dsec\GM13622-in]

Repeatable elements

NameClassFamilyStrand
Baggins1LINELOA-
mature
  1. scaffold_796:1910-1937 -
  2. scaffold_3467:1705-1732 +
  3. scaffold_57:62760-62787 -
  4. scaffold_48:62472-62499 +
  5. scaffold_48:163351-163378 -
  6. scaffold_46:231724-231751 -
  7. scaffold_60:182-209 -
  8. dse_1497  scaffold_60:26834-26861 +
  9. scaffold_63:19444-19471 +
  10. scaffold_72:83871-83898 +
  11. scaffold_67:85590-85617 +
  12. scaffold_82:100646-100673 -
  13. scaffold_90:120223-120250 -
  14. scaffold_98:72523-72550 +
  15. scaffold_101:11398-11425 +
  16. scaffold_107:24358-24385 -
  17. scaffold_149:16787-16814 +
  18. scaffold_165:67337-67364 -
  19. scaffold_171:25271-25298 -
  20. scaffold_14103:461-488 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCATATAATTGAAATTTTGGACGATAGTGAATCTCCTAACTTTGATTCAGGTAAGTTAAAATACTAAAACTTGAAAATATTTAAGAAACTTTTATTATTATTAAGTGGGTTTGTAGGTGTACTGCGACCCAGTCGGATCTATTGTACTACCCCTGAAGTCCAATGCACTGTATAAAAGCCAGAATTTTATTGGGGTTCAGGGCTGCAATTATTTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCT
**************************************************...(((......)))....(((((.((((..(((((...))))).)))).)))))((((((.((((.....))))))))))....................((((((.(((((((..(((.........))).....))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 M054
female body
 V114
embryo
..........GAAATTTTGGACGATAGTGAAT........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
.......ATTGAAAGTTTGGCCGATA................................................................................................................................................................................................................................. 19 2 1 1.00 1 0 1 0
..........GAAATTTTGGACGATAGT............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1
.......ATTGAAATTTTGGACGATAG................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0
........................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGGT....................................................... 28 0 20 0.25 5 0 5 0
........................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGG........................................................ 27 0 20 0.15 3 0 3 0
...............................................................................................................................................................................................................ATTATATCCTGTGGGAATAC........................ 20 3 11 0.09 1 1 0 0
.......................................................................................................................................................................................ATTTTATTGGGGTTCAGGGCTGCA............................................ 24 0 20 0.05 1 0 1 0
.........................................................................................................................................................TGAAGTCCAATTCACTGTATAAAAGC........................................................................ 26 1 20 0.05 1 0 0 1
.........................................................................................................................................................................GTATAAAAGCCAGAATTTTATTGGGGTT...................................................... 28 0 20 0.05 1 0 1 0
.........................................................................................................................................................TGAAGTCCAATGCACTGTATAAAAGC........................................................................ 26 0 20 0.05 1 1 0 0
...........................................................................................................................................................................................TATTGGGGTTCAGGGCTGCAA........................................... 21 0 20 0.05 1 1 0 0
.........................................................................................................................................................TGAAGTCCAATGCACTGTATAAA........................................................................... 23 0 20 0.05 1 0 1 0
...................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTA.............................................................. 26 0 20 0.05 1 0 1 0
....................................................................................................................................................................................................................................TACATGCCCAGGAGTCTGTT... 20 0 20 0.05 1 0 1 0

Anti-sense strand reads

AGTATATTAACTTTAAAACCTGCTATCACTTAGAGGATTGAAACTAAGTCCATTCAATTTTATGATTTTGAACTTTTATAAATTCTTTGAAAATAATAATAATTCACCCAAACATCCACATGACGCTGGGTCAGCCTAGATAACATGATGGGGACTTCAGGTTACGTGACATATTTTCGGTCTTAAAATAACCCCAAGTCCCGACGTTAATAAAGGGCACCCTGATGTATGTACGGGTCCTCAGACAAGGA
**************************************************...(((......)))....(((((.((((..(((((...))))).)))).)))))((((((.((((.....))))))))))....................((((((.(((((((..(((.........))).....))))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
....................................................................................................................................................TGGGGACTTCAGGTTACGTGAC................................................................................. 22 0 1 1.00 1 1 0 0 0
..............................TAGGGGATTGAAACCAAG........................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0
.................................................................................................AATAATTCACCCAAACATCCACAT.................................................................................................................................. 24 0 4 0.25 1 1 0 0 0
..............................TAGAGGATTGAAAGCAAG........................................................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0
..............................TAGGGGATTGAAAGTAAG........................................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0
.............................CTAGGGGATTGAAAGTAAG........................................................................................................................................................................................................... 19 3 20 0.10 2 0 1 0 1
...................................................................................................................................................................ACGTGACATATTTTCGGTCTTAAAAT.............................................................. 26 0 20 0.10 2 2 0 0 0
......................................................................................................................................................GGGACTTCAGGTTACGTGACATATTTT.......................................................................... 27 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................TTCAGGTTACGTGACATATTTTCGGTCT.................................................................... 28 0 20 0.05 1 1 0 0 0
............................................................................................................................................................TCAGGTTACGTGACATATTTTCGGTCTT................................................................... 28 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GGCACCCTGATGTATGTACGGGTCAT.......... 26 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GGCACCCTGATGTATGTACGGGTCCTC......... 27 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................................................................TGTATGTACGGGTCCTCAGACAAGGA 26 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................AAGGGCACCCTGATGTATGT................... 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................TGGCACCCTGATGTATGTACGGGT............. 24 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................GGCACCCTGATGTATGTACG................ 20 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_60:26666-26916 + dse_1497 TCATATAATTGAAATTTTGGACGATAGTG-----------AATCTCCTAACTTTGATTCAGGTAAGTTAAAA--TACTA-----------------------AAACTTG---AAAATATTTAAGAAACT-------------------TTTATTAT-----------------------------TATTAAG-T-GGGTTTGTAGGTGTA-CTGCGACCCAGTCGGATCTATTGTACT-ACCCCT--------------------GAAGTCCAATGCACTGTATAAAAGCCAGAATTTTATTGGGGTTCAGGGCTGCAATT-ATTTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCT
droSim2 2r:1655638-1655894 - dsi_21391 TCATATAATTGAAATTTTAGACGATAGTG-----------AATCTCCTAACTTTGATTCAGGTAAGTTAAAA--TACTA-----------------------AAACTTG---AAAATATTTAAGAAACT-------------------TTTATTAT--------------------TAT---TATTATTAAG-T-GGGCTTGTAGGTGTA-CTGCGACCCAGTCGGATCTATTGTACT-ACCCCT--------------------AAAGTCCAATGCACTGTATAAAAGCCAGAATTTTATTGGGGTTCAGGGCTGCAATT-GTTTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCT
dm3 chr2R:1445991-1446258 + ATATATAATATTAAATATAACTATTCCGA-----------AAATT--------TCTCTCA-------------------------------GCGTAGATTC-ACACTT-------------TGGCATCTTTTACGCCGGTGTAGGGATTTTTATG--------------------TTA-------TATTAAG-T-CGGTTTGTATGTGTA-CTGCGACCCAGTCGGATCTATTGTACTACCCCTTCATGACTCAAAGATCCCCCTGAAGTCCAATGCACTGTATAAATGTCAGAATTTTATTGGGGTTTAGGGCTGCAATT-GATTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCT
droEre2 scaffold_4845:389823-389917 + TCATATTATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTCGACTCAGGTATGTAAAAT--TTCT---GT-G--------------TTAAAACTGG---AAAATGTTTATTAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2h_random_004:1057238-1057342 + TCATATAATTGAAATATTAGACGAAAGTG-----------AATCTCCTAACTTCGACACAGGTAAGTGAAAA--TGCT---GT-G--------------TTAAAACTAA---AAAATATTTAATTAATA-------------------TAAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA
droEug1 scf7180000408846:274-382 - TCAAATAATTGAAACGTTAGACGATAGCG-----------AATCTCCTAACTTTGACTCAGGTATGTGTAAA--CTTTG-----------------------GAGCATATTGAAACTTTTCTAGTAAAC-------------------ACAAATAC-----------------------------AATTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droBia1 scf7180000302470:88002-88103 - TCAAATAATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTTGACTCAGGTATGTAAAAT--CTTA---AT-------------------------G---TTATTTTTTTTGAAAAA-------------------TTTAATTT-----------------------------TTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------
droTak1 scf7180000413637:789-991 - ACTCCGA-----CGTACTTGA------------------------------------------------------------------------------------------------------A-------------------------TTATTA--------------------TTATTAT---TATTAATAT-CGGGTGTCCAGTGTA-CCGCGACCT-GTAAGATCTATTGTACC-CCCATTCAGAGCCTACAGCTCAGATATCAACCCACTTCCTCGAATAAAGTCGAGGAGTTTTAGTGGGTTGATTCTTCCTAGG-AGCTCAGGTGTAAGAGTTCTGGTTCCTAAGATTTTACATCT
droEle1 scf7180000491303:1707-1973 - TTATATAATAATAATAACAG----TAACA-----------AATAT--TAATAATAATAAAAAGAAAATAAAA--CACTA--------ACCAACATGTTTTC-AAACTA-------------ATATA----------------------------A--------------------TTATTAT---TATTAGTATCGGGGTGTTTAGTGTA-CCGCGACCT-GTAAGATCTATTGTAGC-CCCATGCAGAGCCTACAGTTCAGATATCAATCCACTTCCTCGAATAAAGTCGAGGAGTTTTAGTGGGTTGATTCTTCCTAGG-AGCTCAGGTGTAAGAGTTCTGGTTCCTAAAATTTTACCTCT
droRho1 scf7180000778844:8684-8742 - TCAAATAATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTTGAATCAGGTATGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453930:50962-51222 + A------ATTGAAGTTCTGGGA------A-----------AGTCTTTTCGCTTTGAGAA--------------------------------------------CACTT-------------T-----------CAAGAGTAAAC----AGAGATATTATTAAAAGTAAACAACAATCCTTATTATT---ATTAG-GGGGGGAAAAGGTTA-CCTCGACCCAACTGGATCTATTGTACC-CCCTATCTGAGCTTAGAGCTCACCCATCAACCCGGCTCCTTCGATAAGGTTAAGGAGCTTTATCGGGTCGATGCTTCCAGAG-GTCCCAAGTGTAAGGAACCTGGACCCGAGGGTTCTGCTCCT
droKik1 scf7180000302250:17062-17192 - ACAAATAATTGAAATTTTGGACGATACTG-----------AGTCTCCGAATTTTGATTCAGGTATGCAACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGTTTAATCTTAATGTAGT-AACGCTTGCAAAACATATGGCGCTAGAAAACATACATTAATAATAGG--------
droAna3 scaffold_13230:3593408-3593468 - ACAAATTATTGAAATATTAGATGACACGG-----------AGTCTCCAAACTTTGATTCAGGTGAATTACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396048:10843-10966 + ACAAATTATTGAAATATTGGATGATACGG-----------AGTCTCCAAACTTTGACTCAGGTAAGTAACAA--A-TTATAATTCTAA--AATACACTT-------------------TTAAATAGACT-------------------TAATTTGA-----------------------------AATCTTT-T-GTATT----------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGTAT
droPer2 scaffold_1:1094912-1094985 - ACAAATTATTGAGATGTTGGACGATACGG-----------AATCCCCAAATTTTGATTCAGGTACGTAAACA--CA--------------------------AAACTTG---GGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004967:1466310-1466368 + ACAAATTATTGAATTGCTCGATGATACTG-----------AATCACCAAACTTTGATTCAGGTAACTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:14304233-14304313 - TCAAATAATTGAAATGCTGGACGATACGG-----------AATCCCCAAACTTCGATTCAGGTACAAGTCAAATTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---------------------------------------------------------------------------ATTGTAAATAT
droMoj3 scaffold_6500:31021541-31021641 + GCAGATTATTGAAATGCTAGATGATACGG-----------AATCCCCAAACTTCGATACAGGTAACAAATAA--TTTAA-----------------------CAATTT----AAAATAGTCCAAAGTAT-------------------TTGGTCTT-----------------------------------------------------------------------------------------------------------------------------------------------GA------------------------------------------------------------TT
droGri2 scaffold_15116:709238-709508 + TCATAAGCTTAACATCTGTAACAATATTATCAATAGTAATAATTAGCTATTCTTTATTCAAATACAAAAACT--TACCA-----------------------AAACAA-------------ACGAT----------------------TTTATTA--------------------TTAT---TATT---ATT---AGGGGGGAAGCTGCACCCGCGACCT-ATTTGATCTATTGTGCC-CCCCTTCTGAGCCTATAGCTCTTCCATCAGCCCCAACTCCCTTACGAACGTGAGGATCTTTGTTGGGTTGAGGTCTACTATG-TCTTTGTAATTCAAAACATGCGCCCCTAGGATGCTGCTTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TCATATAATTGAAATTTTGGACGATAGTG-----------AATCTCCTAACTTTGATTCAGGTAAGTTAAAA--TACTA-----------------------AAACTTG---AAAATATTTAAGAAACT-------------------TTTATTAT-----------------------------TATTAAG-T-GGGTTTGTAGGTGTA-CTGCGACCCAGTCGGATCTATTGTACT-ACCCCT--------------------GAAGTCCAATGCACTGTATAAAAGCCAGAATTTTATTGGGGTTCAGGGCTGCAATT-ATTTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........GAAATTTTGGACGATAGTG-----------AAT................................................................................................................................................................................................................................................................................................................................2211.0010100
..........GAAATTTTGGACGATAGT...............................................................................................................................................................................................................................................................................................................................................1811.0010010
.......ATTGAAATTTTGGACGATAG................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGGT........................................................28200.2555000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGG.........................................................27200.1533000
......................................................................................................................................................................................................................................................................................................ATTTTATTGGGGTTCAGGGCTGCA.............................................24200.0511000
........................................................................................................................................................................................................................................................................................GTATAAAAGCCAGAATTTTATTGGGGTT.......................................................28200.0511000
....................................................................................................................................................................................................................................................T--------------------GAAGTCCAATGCACTGTATAAAAGC.........................................................................26200.0510100
..........................................................................................................................................................................................................................................................................................................TATTGGGGTTCAGGGCTGCAA............................................21200.0510100
....................................................................................................................................................................................................................................................T--------------------GAAGTCCAATGCACTGTATAAA............................................................................23200.0511000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTA...............................................................26200.0511000
....................................................................................................................................................................................................................................................................................................................................................TACATGCCCAGGAGTCTGTT...20200.0511000
droSim2
TCATATAATTGAAATTTTAGACGATAGTG-----------AATCTCCTAACTTTGATTCAGGTAAGTTAAAA--TACTA-----------------------AAACTTG---AAAATATTTAAGAAACT-------------------TTTATTAT--------------------TAT---TATTATTAAG-T-GGGCTTGTAGGTGTA-CTGCGACCCAGTCGGATCTATTGTACT-ACCCCT--------------------AAAGTCCAATGCACTGTATAAAAGCCAGAATTTTATTGGGGTTCAGGGCTGCAATT-GTTTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTCC.262035.807160004000007500057328000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGT....232031.0062000004600222261091000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTT...242015.353070000001020140064100000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTC..252010.7521500009200090900105000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTG.....22208.95179000013800251100023000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGGGC.................................................25206.751350002200049606502000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTA...............................................................26155.33800000001805470010000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTAT..............................................................27154.87730000002803850020000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGG...................................................23204.75950000000259206080000
........................................................................................................................................................................................................TGTAGGTGTA-CTGCGACCCAGTCGGA........................................................................................................................................2644.5018000000150300000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTT.......................................................19204.0080000080000000000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGT........................................................24153.475200020011101325000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGG..........................................................22163.2552000000136660030000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGG.........................................................23152.93440001002206123000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGGG..................................................24202.65530017000002180160000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGGATC......................................................................................................................................2642.501000000073000000000
..............................................................................................................................................................................................................................................................................................................................................ACTACATACATGCCCAGG...........18202.4048000048000000000000
.......................................................................................................................................................................................................TTGTAGGTGTA-CTGCGACCCAGTCGGA........................................................................................................................................2742.25900000052200000000
...........................................CTCCTAACTTTGATTCAGAGG...........................................................................................................................................................................................................................................................................................................2112.00202000000000000000
.............................................................................................................................................................................................AAG-T-GGGCTTGTAGGTGTA-CT......................................................................................................................................................2112.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................TTTCCCGTGGGACTACATACAT..................22201.9038000038000000000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTT.......................................................25151.8728000300012247000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTCCT27201.8537000000018009073000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGG.............................19201.8537000037000000000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTCA.26201.8036000000000000351000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGA............................20201.7535000003500000000000
...............................................................................................................................................................................................................................................................................................................................................CTACATACATGCCCAGGAGTCTGT....24201.75350000000191600000000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGGA........................................................................................................................................2441.75700000051010000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACTACATAC....................28201.7034000003200020000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTTCAGGG..................................................28151.2719000000121600000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTTCAGG...................................................27151.2719000000170200000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTA..25201.2024000000000000240000
...........................................................................................................................................................................................................................CAGTCGGATCTATTGTACT-ACCCCT--------------------A.................................................................................................2611.00100000010000000000
.......................................................................................................................................................................................................TTGTAGGTGTA-CTGCGACCCAGTCGGATC......................................................................................................................................2941.00400000040000000000
.................................................................................................................................................................................................T-GGGCTTGTAGGTGTA-CTGCGACC................................................................................................................................................2411.00100000000100000000
........................................................................................................................................................................................................TGTAGGTGTA-CTGCGACCCAGTCGGATC......................................................................................................................................2841.00400000011200000000
.................................................................................................................................................................................................T-GGGCTTGTAGGTGTA-CTGT....................................................................................................................................................2011.00100000000100000000
.........TGAAATTTTAGACGATAGTG-----------AATCTCC............................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................GACGATAGTG-----------AATCTCCTAACTTTGAA..................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
....................................................................................................................................................................................................................................................T--------------------AAAGTCCAATGCACTGTATAAAAGC.........................................................................2611.00100000000100000000
............................................................................................................................................................................................TAAG-T-GGGCTTGTAGGTGTA-CTGCGAC.................................................................................................................................................2711.00100000000010000000
.............ATTTTAGACGATAGTG-----------AATCTC.............................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTTCAGGGC.................................................29150.9314000000140000000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTC......................................................26150.871300000014332000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACTACA.......................25200.851700080030042000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAG....................................................28150.801200010003530000000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGGAT.......................................................................................................................................2540.75300000020000010000
.....................................................................................................................................................................................................................................................................................................................AGGGCTGCAATT-GTTTCCCGTGGGAC...........................26200.7515000000012120000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATT..................................................................23150.731100000020600030000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAGGG..................................................30150.731100000046100000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTATT.............................................................28140.711000000030700000000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGG.........................................................27130.69900000050220000000
..................................................................................................................................................................................................................................................................................................CAGAATTTTATTGGGGTTCAGGGC.................................................24200.651300020025201100000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACT..........................22200.6513000300000100000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTCGA27200.601200000070400010000
..............................................................................................................................................................................................................................TCGGATCTATTGTACT-AC..........................................................................................................................18170.5910000001000000000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAGG...................................................29150.53800000005300000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTTC......................................................24150.53800000010601000000
..................................................................................................................................................................................................................................................CCT--------------------AAAGTCCAATGCACTGTATAAA............................................................................2520.50100000001000000000
..............................................................................................................................................................................................................TGTA-CTGCGACCCAGTCGGATCTAT...................................................................................................................................2580.50400000010300000000
.......................................................................................................................................................................................................TTGTAGGTGTA-CTGCGACCCAGTCGGAT.......................................................................................................................................2840.50200000020000000000
.....................................................................................................................................................................................................................................................................................................................................................ACATGCCCAGGAGTCTGT....18200.40800000000008000000
................................................................................................................................................................................................................................................................................................................................T-GTTTCCCGTGGGACTACATACATGCC...............27200.35700000000000070000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCT......21200.35700010000003003000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACTA.........................23200.35700000030040000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAG....................................................22200.35700000000331000000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGGATCT.....................................................................................................................................2730.33100000001000000000
...............................................................................................................................................................................................................................................................................CAATGCACTGTATAAAAGCCAGAAT...................................................................25120.33400000010010002000
.....................................................................................................................................................................................................................................................................................................................................................ACATGCCCAGGAGTCTGTT...19200.30600000000006000000
.........................................................................................................................................................................................................................................................................................TATAAAAGCCAGAATTTTATTGGGGT........................................................26150.27400000000013000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTT.................................................................24150.27400000020200000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTT................................................................25150.27400000020200000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAGA...................................................29150.27400000004000000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTTCAG....................................................26150.27400000010300000000
................................................................................................................................................................................................................................................................................................................................T-GTTTCCCGTGGGACTACATACATGCCC..............28200.25500000000010040000
...........................................................................................................................................................................................................................................................................AGTCCAATGCACTGTATAAAAGCCAGAA....................................................................28120.25300000000200001000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGGATA......................................................................................................................................2640.25100000000000010000
.......................................................................................................................................................................................................TTGTAGGTGTA-CTGCGACCCAGTCGG.........................................................................................................................................2640.25100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................CCAGGAGTCTGTTCC.15200.25500000040100000000
........................................................................................................................................................................................................TGTAGGTGTA-CTGCGACCCAGTCGGAA.......................................................................................................................................2740.25100000001000000000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCCAGTCGG.........................................................................................................................................2340.25100000010000000000
...............................................................................................................................................................................................................GTA-CTGCGACCCAGTCGGATCT.....................................................................................................................................2280.25202000000000000000
........................................................................................................................................................................................................................................................................................................TTTATTGGGGTTCAGGGCTGCAAT...........................................24200.25500010040000000000
...............................................................................................................................................................................................................................................................................CAATGCACTGTATAAAAGCCAGAATT..................................................................26120.25300000000300000000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGG..........................................................26140.21300010010100000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGGTT.......................................................23150.20300000000300000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGGGCT................................................26200.20400000000000040000
..........................................................................................................................................................................................................TAGGTGTA-CTGCGACCC...............................................................................................................................................1750.20100000000001000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGGG.........................................................21150.20300000000201000000
.........................................................................................................................................................................................................................................................................................................TTATTGGGGTTCAGGGCTGCAATT-.........................................24200.20400000001300000000
...............................................................................................................................................................................................................................................................................................AGCCAGAATTTTATTGGGGTTCAGGG..................................................26160.19300000001011000000
.............................................................................................................................................................................................................................................................................................AAAGCCAGAATTTTATTGGG..........................................................20160.19300000010200000000
...........................................................................................................................................................................................................AGGTGTA-CTGCGACCCAGTCGGATC......................................................................................................................................2560.17100000010000000000
..............................................................................................................................................................................................................................................................................CCAATGCACTGTATAAAAGCCAGAATT..................................................................27120.17200000000100001000
............................................................................................................................................................................................................................................................................GTCCAATGCACTGTATAAAAGCCAGAATT..................................................................29120.17200000010100000000
..............................................................................................................................................................................................................................TCGGATCTATTGTACT-ACCCCT--------------------..................................................................................................22120.17200000020000000000
....................................................................................................................................................................................................................TGCGACCCAGTCGGATCTATTGTACT-............................................................................................................................26120.17200000000200000000
................................................................................................................................................................................................................................................................................................................................T-GTTTCCCGTGGGACTACATACATGC................26200.15300000000001020000
...........................................................................................................................................................................................................................................................................................................................................GGGACTACATACATGCCCAGGAGTCTGT....28200.15300000000000030000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTC.......20200.15300000000000003000
....................................................................................................................................................................................................................................................................................................................................................TACATGCCCAGGAGTCTGTTCCT23200.15300000010002000000
.....................................................................................................................................................................................................................................................................................................................AGGGCTGCAATT-GTTTCCCGTGGGA............................25200.15300000030000000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACTACATA.....................27200.15300000003000000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGGGCTT...............................................27200.15300300000000000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGACC..........................22200.15300000011100000000
.......................................................................................................................................................................................................................................................................................................................GGCTGCAATT-GTTTCCCGTGGGACTA.........................26200.15300000000000030000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGTT...........................21200.15300000003000000000
....................................................................................................................................................................................................................................................................................................................CAGGGCTGCAATT-GTTTCCCGTGGGA............................26200.15300000010020000000
.....................................................................................................................................................................................................................................................................................................................................TCCCGTGGGACTACATACATGCCCA.............25200.15300000000210000000
...................................................................................................................................................................................................................................................................................................................TCAGGGCTGCAATT-GTTTCCCGTGGGAC...........................28200.15300000001200000000
............................................................................................................................................................................................................................................................................................AAAAGCCAGAATTTTATTGGGGTT.......................................................24150.13200000000011000000
.........................................................................................................................................................................................................................CCCAGTCGGATCTATTGTACT-ACCCCT--------------------..................................................................................................2780.13100000000100000000
............................................................................................................................................................................................................................................................................................AAAAGCCAGAATTTTATTGGG..........................................................21160.13200000000001010000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGC.........................................................................16160.13200000000200000000
.......................................................................................................................................................................................................................GACCCAGTCGGATCTATTGTACT-ACCCCT--------------------..................................................................................................2980.13100000000100000000
.......................................................................................................................................................................................................................GACCCAGTCGGATCTATTGTACT-ACCCC.......................................................................................................................2880.13100000000100000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCC........................................................................17160.13200000001100000000
...................................................................................................................................................................................................................CTGCGACCCAGTCGGATCT.....................................................................................................................................19100.10101000000000000000
....................................................................................................................................................................................................................................................................................................................CAGGGCTGCAATT-GTTTCCCGTGGGAC...........................27200.10200000002000000000
....................................................................................................................................................................................................................................................................................................................................................TACATGCCCAGGAGTCTGTTC..21200.10200000000000020000
.................................................................................................................................................................................................................................................................................................................................................ACATACATGCCCAGGAGTCTGT....22200.10200000000002000000
...........................................................................................................................................................................................................................CAGTCGGATCTATTGTACT-ACCCCT--------------------..................................................................................................25100.10100000000010000000
........................................................................................................................................................TTAT--------------------TAT---TATTATTAAG-T-GGGA....................................................................................................................................................................22200.10200000002000000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGG...........16200.10200000002000000000
......................................................................................................................................................................................................................................................................................................ATTTTATTGGGGTTCAGGGCTGCAA............................................25200.10200000000200000000
....................................................................................................................................................................................................................................................................................................GAATTTTATTGGGGTTCAGGG..................................................21200.10200000000002000000
..........................................................................................................................................................................................................................................................................................................TATTGGGGTTCAGGGCTGCAATT-GT.......................................25200.10200000000110000000
........................................................................................................................................................................................................................................................................................................................................................TGCCCAGGAGTCTGTTCCT19200.10200000000002000000
.....................................................................................................................................................................................................................................................................................................................................TCCCGTGGGACTACATACATGCC...............23200.10200000000000020000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTA.....22200.10200000000000020000
.................................................................................................................................................................................................................................................................................................................................................ACATACATGCCCAGGAGTCTGTTC..24200.10200000000000020000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTTA.26200.10200010000000010000
..................................................................................................................................................................................................................................................................................................CAGAATTTTATTGGGGTTCAGGG..................................................23200.10200000000101000000
........................................................................................................................................................................................................................................................................................................TTTATTGGGGTTCAGGG..................................................17200.10200000000002000000
................................................................................................................................................................................................................................................................................................................................T-GTTTCCCGTGGGACTACATACATGCCCA.............29200.10200000010000010000
.....................................................................................................................................................TTATTAT--------------------TAT---TATTATTAAG-T-GG......................................................................................................................................................................23100.10100000000010000000
.............................................................................................................................................................................................................................................................................................................TGGGGTTCAGGGCTGCAATT-GTTTAAA..................................27200.10200000000000020000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGT...................................................23200.10200000000000011000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGTTCG.26200.10200000010100000000
...................................................................................................................................................................................................................................................................................................................TCAGGGCTGCAATT-GTTTCCCGTGGG.............................26200.10200000000200000000
.......................................................................................................................................................................................................................................................................................................TTTTATTGGGGTTCAGGGCTGCAAT...........................................25200.10200000011000000000
............................................................................................................................................................................................................................................................................................................TTGGGGTTCAGGGCTGCAATT-GTTT.....................................25200.10200000010100000000
.............................................................................................................................................................................................................................................................................................................................................GACTACATACATGCCCAGGAGTCTGT....26200.10200000000002000000
............................................................................................................................................................................................................................................................................................................TTGGGGTTCAGGGCTGCAATT-GTT......................................24200.10200000000200000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGTT............................20200.10200000001100000000
.............................................................................................................................................................................................................................................................................................................TGGGGTTCAGGGCTGCAATT-GTTTCCCG.................................28200.10200000000001010000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGTCTGAC...24200.10200000000000020000
.......................................................................................................................................................................................................................................................................................................................................................ATGCCCAGGAGTCTGTT...17200.10200000000002000000
................................................................................................................................................................................................................................................................................................................................................TACATACATGCCCAGGAGT........19200.10200000010010000000
.......................................................................................................................................................................................................................................................................................................................GGCTGCAATT-GTTTCCCGTGG..............................21200.10200000000200000000
....................................................................................................................................................................................................................................................................................................................................................TACATGCCCAGGAGTCTGT....19200.10200000000002000000
....................................................................................................................................................................................................................................................................................................................................TTCCCGTGGGACTACATACATGCCCAG............27200.10200000000000020000
.................................................................................................................................................................................................................................................................................................................................................ACATACATGCCCAGGAGTCTGTTTA.25200.10200000000000020000
...........................................................................................................................................................................................................................................................................................................................................GGGACTACATACATGCCCAGGAGTCA......26200.10200000000000020000
.............................................................................................................................................................................................................................................................................TCCAATGCACTGTATAAAAGCCAGAATT..................................................................28120.08100000010000000000
...........................................................................................................................................................................................................................................................................AGTCCAATGCACTGTATAAAAGCCAGAATT..................................................................30120.08100000000010000000
....................................................................................................................................................................................................................TGCGACCCAGTCGGATCTATTGTACT-A...........................................................................................................................27120.08100000010000000000
............................................................................................................................................................................................................................................................................GTCCAATGCACTGTATAAAAGCCAGATC...................................................................28120.08100000010000000000
.............................................................................................................................................................................................................................................................................TCCAATGCACTGTATAAAAGCCAGAAT...................................................................27120.08100000000000010000
.....................................................................................................................................................................................................................GCGACCCAGTCGGATCTATTGTACT-AC..........................................................................................................................27120.08100100000000000000
...........................................................................................................................................................................................................................................................................AGTCCAATGCACTGTATAAAAGCCA.......................................................................25120.08100000000100000000
...........................................................................................................................................................................................................................................................................AGTCCAATGCACTGTATAAAAGCCAGA.....................................................................27120.08100000000100000000
...........................................................................................................................................................................................................................................................................AGTCCAATGCACTGTATAAAAGCCAGC.....................................................................27120.08100000000010000000
.............................................................................................................................................................................................................................................................................TCCAATGCACTGTATAAAAGCCAGA.....................................................................25120.08100000010000000000
.....................................................................................................................................................................................................................................................................................ACTGTATAAAAGCCAGAATTTTATTGGGG.........................................................29130.08100000010000000000
.................................................................................................................................................................................................................................................................................ATGCACTGTATAAAAGCCAGAATTT.................................................................25130.08100000000000010000
..........................................................................................................................................................................................................................CCAGTCGGATCTATTGTACT-A...........................................................................................................................21130.08100000001000000000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGGT........................................................28130.08100000000100000000
..........................................................................................................................................................................................................................CCAGTCGGATCTATTGTACT-ACA.........................................................................................................................23130.08100000000010000000
................................................................................................................................................................................................................................................................................AATGCACTGTATAAAAGCCAGAATTT.................................................................26130.08100000010000000000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTATTGGGGTT.......................................................29130.08100000010000000000
.....................................................................................................................................................................................................................................................................................ACTGTATAAAAGCCAGAATTTTATTGGG..........................................................28140.07100000010000000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAAT...................................................................22150.07100000000000010000
.........................................................................................................................................................................................................................................................................................TATAAAAGCCAGAATTTTATTGGGG.........................................................25150.07100000000010000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGA.....................................................................20150.07100000010000000000
............................................................................................................................................................................................................................................................................................AAAAGCCAGAATTTTATTGGGGTTCAGA...................................................28150.07100000000010000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCA.......................................................................18150.07100000000001000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTTAA..............................................................27150.07100000000100000000
..............................................................................................................................................................................................................................................................................................AAGCCAGAATTTTATTGGGGTTCAG....................................................25150.07100000000001000000
.........................................................................................................................................................................................................................................................................................TATAAAAGCCAGAATTTTATTGGGGTTC......................................................28150.07100000001000000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTA.......................................................25150.07100000000000010000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAGGGC.................................................31150.07100000001000000000
.........................................................................................................................................................................................................................................................................................TATAAAAGCCAGAATTTTATTGGGGA........................................................26150.07100000000010000000
............................................................................................................................................................................................................................................................................................AAAAGCCAGAATTTTATTGGGGTTCAG....................................................27150.07100000000010000000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGGGGTTCAA....................................................28150.07100000000010000000
.................................................................................................................................................................................................................................................................................ATGCACTGTATAAAAG..........................................................................16150.07100000000001000000
.....................................................................................................................................................................................................................................................................................ACTGTATAAAAGCCA.......................................................................15160.06100000000001000000
............................................................................................................................................................................................................................................................................................AAAAGCCAGAATTTTATTGGGGC........................................................23160.06100000000001000000
...............................................................................................................................................................................................................................................................................................AGCCAGAATTTTATTGGGGTTCAGG...................................................25160.06100010000000000000
.......................................................................................................................................................................................................................................................................................TGTATAAAAGCCAGAATTTTA...............................................................21160.06100000000001000000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAGCCAGAATTTA................................................................25160.06100000000000010000
...........................................................................................................................................................................................................................................................................................TAAAAGCCAGAATTTTATTGG...........................................................21160.06100000000000001000
..................................................................................................................................................................................................................................................................................TGCACTGTATAAAAG..........................................................................15170.06100000000100000000
......................................................................................................................................................TATTAT--------------------TAT---TATTATTAAG-T-GGTA....................................................................................................................................................................24190.05100000000100000000
...................................................................................................................................................................................................................................................................................................AGAATTTTATTGGGGT........................................................16200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................TCAGGGCTGCAATT-GTTTCCCGTGGGACT..........................29200.05100000001000000000
.........................................................................................................................................................................................................................................................................................................................CTGCAATT-GTTTCCCGTGGGA............................21200.05100000010000000000
.........................................................................................................................................................................................................................................................................................................................CTGCAATT-GTTTCCCGTGGGACT..........................23200.05100000010000000000
..........................................................................................................................................................................................................................................................................................................................TGCAATT-GTTTCCCGTGGGT............................20200.05100000000001000000
...............................................................................................................................................................................................................................................................................................................................TT-GTTTCCCGTGGGA............................15200.05100000010000000000
.................................................................................................................................................................................................................................................................................................CCAGAATTTTATTGGGGTTCAGGGCAA...............................................27200.05100000000000010000
..................................................................................................................................................................................................................................................................................................................TTCAGGGCTGCAATT-GTTTCCCGTGGGACA..........................30200.05100000000100000000
..............................................................................................................................................................................................................................................................................................................................................ACTACATACATGCCCAGGAGT........21200.05100000000001000000
dm3
ATATATAATATTAAATATAACTATTCCGA-----------AAATT--------TCTCTCA-------------------------------GCGTAGATTC-ACACTT-------------TGGCATCTTTTACGCCGGTGTAGGGATTTTTATG--------------------TTA-------TATTAAG-T-CGGTTTGTATGTGTA-CTGCGACCCAGTCGGATCTATTGTACTACCCCTTCATGACTCAAAGATCCCCCTGAAGTCCAATGCACTGTATAAATGTCAGAATTTTATTGGGGTTTAGGGCTGCAATT-GATTCCCGTGGGACTACATACATGCCCAGGAGTCTGTTCCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................TATTGTACTACCCCTTCATGACTCAAA...........................................................................................................2720422.558451000000000000000000000100000003000000000000011000002001000000000000000000000000000000120000015100000005900006080027020000000000000000000000200002300000000000000000000000000000010040002000000400000000702000000000000000000033641981791782896000000000000000000000000000000000000000000000000000000000000000000001800000000000000000000000000030000000
........................................................................................................................................................................................................................................TGTACTACCCCTTCATGACTCAAAGA.........................................................................................................2620124.8024960000001000000000000000000000103304000000000000000020000000100000000000000000000000042000350001000271060000076101613010002041000000000000003000000004000000000004100000000000000001000035300000000000000000000901000000000000000000000149140017750000000000000000001000000000000000000000000000000000000000000000000000100000214000000000002000020000000
.....................................................................................................................................................................................................................................TATTGTACTACCCCTTCATGACTC..............................................................................................................242092.7018540000003200000000000003015000000000100110000038120100005200000000000000000000000000000600220000000220000003030000013000000000000000010023000000026103510512110000010430000000000004000000100000015000000019000000001530402000000000002940014250000000000000000000000000002000000000000000000000000000000000000002100100002000000015000000000000000050110000000
...................................................................................................................................................................................................................................TCTATTGTACTACCCCTTCATGACTC..............................................................................................................262080.10160200000000000000000000000000000600000000020000004000000000000000000000000000000000000000000000004204000130000000200000000000000000100000003000600002040030000200000000000200000005060006000000750000001400018001200000000000000022100003972724910000000000000000000000000000000000000000000000000000000000000000000501100000000000000000000000000000000
........................................................................................................................................................................................................................................TGTACTACCCCTTCATGACTCAAA...........................................................................................................242070.3514070000000000000000000000000000010000000000000000000000000000000000000000000000000000082801100000000181404900000800103880174200350000000000010000002000000000000010000000000000000000000001010000000000040100000004000000000000000000000000422106180000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ACTACATACATGCCCAGGAGTCTGT....252070.25140500000000000000000000030600000000000020522310000010300040002010000000000000000000000000000000000000000000000000000000000000000000000000000000028019180191816131300232120000000000000000000000000000000001018173170213029000000011700036900002000602270051200000000030000000000000000000000000000000000000000000000000061030010000002000010141000000000005031601751920000000
........................................................................................................................................................................................................................................TGTACTACCCCTTCATGACTCAAAGATC.......................................................................................................282066.451329000000000000000000000000000006500000000000000000070000000003000000000000000000000000000600000000000000000000000020007000000000000000030000000020010000000000000000000000001000203660002300000000000000100050000000000000000001971100920000000000000000000002000000000000000000000000000000000000000000000000100000000000000000000000000100000000
.....................................................................................................................................................................................................................................TATTGTACTACCCCTTCATGACTCAAAGA.........................................................................................................292057.701154000000000000000000000100000000200000000000001000000030000000000000000000000000000000000000000000000001000000000000000000000000000000000120000100200000001400000000000000000000000000000000000000000000000000000000000020005880139002100192000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000
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droEre2
TCATATTATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTCGACTCAGGTATGTAAAAT--TTCT---GT-G--------------TTAAAACTGG---AAAATGTTTATTAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................AGTG-----------AATCTCCTAACTTCGACTCAGA.............................................................................................................................................................................................................................................................................................................2611.0010100000
droYak3
TCATATAATTGAAATATTAGACGAAAGTG-----------AATCTCCTAACTTCGACACAGGTAAGTGAAAA--TGCT---GT-G--------------TTAAAACTAA---AAAATATTTAATTAATA-------------------TAAAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......ATTGAAATATTAGACGAAAGTG-----------AAT................................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEug1
TCAAATAATTGAAACGTTAGACGATAGCG-----------AATCTCCTAACTTTGACTCAGGTATGTGTAAA--CTTTG-----------------------GAGCATATTGAAACTTTTCTAGTAAAC-------------------ACAAATAC-----------------------------AATTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
TCAAATAATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTTGACTCAGGTATGTAAAAT--CTTA---AT-------------------------G---TTATTTTTTTTGAAAAA-------------------TTTAATTT-----------------------------TTTAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------SizeHit CountTotal NormTotal
No Reads
droTak1
ACTCCGA-----CGTACTTGA------------------------------------------------------------------------------------------------------A-------------------------TTATTA--------------------TTATTAT---TATTAATAT-CGGGTGTCCAGTGTA-CCGCGACCT-GTAAGATCTATTGTACC-CCCATTCAGAGCCTACAGCTCAGATATCAACCCACTTCCTCGAATAAAGTCGAGGAGTTTTAGTGGGTTGATTCTTCCTAGG-AGCTCAGGTGTAAGAGTTCTGGTTCCTAAGATTTTACATCTSizeHit CountTotal NormTotal
No Reads
droEle1
TTATATAATAATAATAACAG----TAACA-----------AATAT--TAATAATAATAAAAAGAAAATAAAA--CACTA--------ACCAACATGTTTTC-AAACTA-------------ATATA----------------------------A--------------------TTATTAT---TATTAGTATCGGGGTGTTTAGTGTA-CCGCGACCT-GTAAGATCTATTGTAGC-CCCATGCAGAGCCTACAGTTCAGATATCAATCCACTTCCTCGAATAAAGTCGAGGAGTTTTAGTGGGTTGATTCTTCCTAGG-AGCTCAGGTGTAAGAGTTCTGGTTCCTAAAATTTTACCTCTSizeHit CountTotal NormTotal
No Reads
droRho1
TCAAATAATTGAAATATTAGACGATAGTG-----------AATCTCCTAACTTTGAATCAGGTATGTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A------ATTGAAGTTCTGGGA------A-----------AGTCTTTTCGCTTTGAGAA--------------------------------------------CACTT-------------T-----------CAAGAGTAAAC----AGAGATATTATTAAAAGTAAACAACAATCCTTATTATT---ATTAG-GGGGGGAAAAGGTTA-CCTCGACCCAACTGGATCTATTGTACC-CCCTATCTGAGCTTAGAGCTCACCCATCAACCCGGCTCCTTCGATAAGGTTAAGGAGCTTTATCGGGTCGATGCTTCCAGAG-GTCCCAAGTGTAAGGAACCTGGACCCGAGGGTTCTGCTCCTSizeHit CountTotal NormTotal
No Reads
droKik1
ACAAATAATTGAAATTTTGGACGATACTG-----------AGTCTCCGAATTTTGATTCAGGTATGCAACAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGTTTAATCTTAATGTAGT-AACGCTTGCAAAACATATGGCGCTAGAAAACATACATTAATAATAGG--------SizeHit CountTotal NormTotal
No Reads
droAna3
ACAAATTATTGAAATATTAGATGACACGG-----------AGTCTCCAAACTTTGATTCAGGTGAATTACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................TCTCCAAACTTTGATTCAG..............................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
ACAAATTATTGAAATATTGGATGATACGG-----------AGTCTCCAAACTTTGACTCAGGTAAGTAACAA--A-TTATAATTCTAA--AATACACTT-------------------TTAAATAGACT-------------------TAATTTGA-----------------------------AATCTTT-T-GTATT----------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGTATSizeHit CountTotal NormTotal
No Reads
droPer2
ACAAATTATTGAGATGTTGGACGATACGG-----------AATCCCCAAATTTTGATTCAGGTACGTAAACA--CA--------------------------AAACTTG---GGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...AATTATTGAGATGTTGGACGATACGG-----------AAT................................................................................................................................................................................................................................................................................................................................2911.001100000
..........GAGATGTTGGACGATACGG-----------AA.................................................................................................................................................................................................................................................................................................................................2111.001000001
...AATTATTGAGATGTTGGAC.....................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........TGAGATGTTGGACGATACGG-----------AATCCC.............................................................................................................................................................................................................................................................................................................................2611.001100000
..........GAGATGTTGGACGATACG...............................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
ACAAATTATTGAATTGCTCGATGATACTG-----------AATCACCAAACTTTGATTCAGGTAACTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........AATTGCTCGATGATACTG-----------AAT................................................................................................................................................................................................................................................................................................................................2112.00200002
.....TTATTGAATTGCTCGATGATACTG-----------AAT................................................................................................................................................................................................................................................................................................................................2711.00100100
.............TTGCTCGATGATACTG-----------AATCACC............................................................................................................................................................................................................................................................................................................................2311.00110000
.........TGAATTGCTCGATGATACTG-----------AATCACC............................................................................................................................................................................................................................................................................................................................2711.00110000
droVir3
TCAAATAATTGAAATGCTGGACGATACGG-----------AATCCCCAAACTTCGATTCAGGTACAAGTCAAATTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---------------------------------------------------------------------------ATTGTAAATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................GATACGG-----------AATCCCCAAACTT......................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.....TAATTGAAATGCTGGACGA...................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
GCAGATTATTGAAATGCTAGATGATACGG-----------AATCCCCAAACTTCGATACAGGTAACAAATAA--TTTAA-----------------------CAATTT----AAAATAGTCCAAAGTAT-------------------TTGGTCTT-----------------------------------------------------------------------------------------------------------------------------------------------GA------------------------------------------------------------TTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....ATTATTGAAATGCTAGATGATACGG-----------A..................................................................................................................................................................................................................................................................................................................................2611.001100000
droGri2
TCATAAGCTTAACATCTGTAACAATATTATCAATAGTAATAATTAGCTATTCTTTATTCAAATACAAAAACT--TACCA-----------------------AAACAA-------------ACGAT----------------------TTTATTA--------------------TTAT---TATT---ATT---AGGGGGGAAGCTGCACCCGCGACCT-ATTTGATCTATTGTGCC-CCCCTTCTGAGCCTATAGCTCTTCCATCAGCCCCAACTCCCTTACGAACGTGAGGATCTTTGTTGGGTTGAGGTCTACTATG-TCTTTGTAATTCAAAACATGCGCCCCTAGGATGCTGCTTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................TGCGCCCCTAGGATGCTGCTT..21200.05101

Generated: 05/18/2015 at 12:06 AM