ID:

dse_1485

 Coordinate:

scaffold_6:3432311-3432558 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.9 -30.7 -30.7

Flybase annnotation

exon [dsec_GLEANR_10509:3]; CDS [Dsec\GM10476-cds]; exon [dsec_GLEANR_10509:4]; CDS [Dsec\GM10476-cds]; intron [Dsec\GM10476-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTCGGCGATAGGACTCCTGGCAGGAAGACCATATTGGAGTACAGCGATGTAAGTTTCGATACATAAATTGGCATGAAGTTAAGTTTTTTAAAGTTTTTCTTATTAACTTGAAGATTGAGATGCATTACGGCTTCTAATGATTAAAATCTTTTCAAAATCTTTACATACTTACGCAGAACTAAAAGCTATTAGTAATCTATCTTATTGTATGATATCAGTACATCTCAGTTATCTTATCTTATTATTCTCTTATTTATCAAGGCTATTGACTAAAATAAAATTACTTAATTTTCCAGCTCTTCTCGTACAAATACTTCTGGCACGGCATTCATAGGACTTTGCTCTC
**************************************************...................((((...((((((((((.((((((((((.........)))))((.(((((((((((((((.......)))))........................(((((......((((((((......)))))..)))........))))).........)))))))))).))...................((((((((.....)))).)))).)))))..))))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 V115
head
 M054
female body
......................................GAGTACTGCGACGTAAGT.................................................................................................................................................................................................................................................................................................... 18 2 1 2.00 2 0 0 2 0
.........ATAGGACTCCTGGCAGGAAGACC............................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0
................................ATATTGGAGTACAGCGATCTC....................................................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0
.............GACTCCTGGCAGGATCACCA........................................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 1
......................................................................................................................................................................ATACTTACGCAGAACTAAAA.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................TTACGCAGAACTAAAAGCTAT............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................CCTGGCAGGAAGACCATATTGGA.................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
...............CTCCTGGCAGGAACGCCA........................................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 1 0 0 0
......................................GAGGACAGCGACGTAAGT.................................................................................................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 1 0
......................................GAGGACTGCGACGTAAGTT................................................................................................................................................................................................................................................................................................... 19 3 11 0.27 3 0 1 0 2
.............GACTCCTGGCAGGATAGCCA........................................................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0
..................................................................................................................................................................TTACAACCTTACGCAGCAC....................................................................................................................................................................... 19 3 8 0.25 2 1 0 0 1
............GGACTCCTGGCAGGATCGCCA........................................................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0
.............GTCTCCTGGCAGGAACGCCA........................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0
.............GACTCCTGGCAGGATTGCCA........................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1
.............GTCTCCTGGCAGGATCACCA........................................................................................................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 1
.....................................TGAGTACTGCGACGTAAGT.................................................................................................................................................................................................................................................................................................... 19 3 8 0.13 1 0 1 0 0
............GGACTCCTGGCAGGATCGCC............................................................................................................................................................................................................................................................................................................................ 20 3 15 0.07 1 1 0 0 0

Anti-sense strand reads

TAAAGCCGCTATCCTGAGGACCGTCCTTCTGGTATAACCTCATGTCGCTACATTCAAAGCTATGTATTTAACCGTACTTCAATTCAAAAAATTTCAAAAAGAATAATTGAACTTCTAACTCTACGTAATGCCGAAGATTACTAATTTTAGAAAAGTTTTAGAAATGTATGAATGCGTCTTGATTTTCGATAATCATTAGATAGAATAACATACTATAGTCATGTAGAGTCAATAGAATAGAATAATAAGAGAATAAATAGTTCCGATAACTGATTTTATTTTAATGAATTAAAAGGTCGAGAAGAGCATGTTTATGAAGACCGTGCCGTAAGTATCCTGAAACGAGAG
**************************************************...................((((...((((((((((.((((((((((.........)))))((.(((((((((((((((.......)))))........................(((((......((((((((......)))))..)))........))))).........)))))))))).))...................((((((((.....)))).)))).)))))..))))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V113
male body
.............CTGATGACCGTCCTACTGG............................................................................................................................................................................................................................................................................................................................ 19 2 5 0.20 1 1 0
......................................................................................................................................................................................................................................................................................................GGTCCAGGAGAGCATGATT................................... 19 3 6 0.17 1 1 0
......................................................................................................................................................AAAGTTTTCAGAAATGTATGA................................................................................................................................................................................. 21 3 16 0.06 1 1 0
........................................................AAGCTATGTAAGGAACCGT................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1
...............................................................................................................................................GTTGTAGAAAAGTTTTAGTAA........................................................................................................................................................................................ 21 3 20 0.05 1 0 1
.........TATACTGATGACCGTCCTT................................................................................................................................................................................................................................................................................................................................ 19 2 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_6:3432261-3432608 - dse_1485 ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCGA----------------------------------TA-CATAAATTGGCATGAAGTTAAGTTT--TTTAAAGTTTTTCTTATTAACTTGAAGATTGAGATGCATTACGGCTTCTAATGA--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AATCTTTTCAA-AATCTTT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-AACTAAAAGCTATTAGTAATCTATCTTATTG--------TATGATA-------------------------------------------------------------TCAGTACATCTCAGTTA-------------------TCTTATCTTATTATTCTCTTATTTATCAAGGC-------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---GACTAAAATAAAATTAC-----TTAATTTTCCAGCTCTTCTCGTACAAATACTTCTGGCACGGCATTCATAGGACTTTGCTCTC--
droSim2 3r:3254509-3254858 - dsi_7713 ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCGA----------------------------------TA-AATAAATTGTCAGGAAGTAAAGATT--TTTAAAATTTCTCTTATTAACTTGAAGATTGAGATGCATTACGGCTTCTAATGAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AATCTTTTCAA-AATCTTT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-AACTAAAAGCTATTAGTAATCTATCTTATTG--------TATAATA-------------------------------------------------------------TCAGTACATCTCAGTTA-------------------TCTTATCTTATTATTATCTTATTTATCTAGGC-------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT---GACTAAAATAAAATTAC-----TTAATTTTCCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATTCATAGGACTTTGCTCTC--
dm3 chr3R:3335951-3336296 - ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCAA----------------------------------AAAAATAAATTGGAACGAAGTTAAGCTT--TTTTAAAAGTCTCTTATTAACGTGAAGATTGAGATGCATTATGGCTTTTAATGGTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATGGCTTTCAA-AATCATT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-TACTAAA----------------------------------TAATA-------------------------------------------------------------TCAGTACATCTCAGTTTATAATTTGTAATTAAATACTCTTA-----------------------ACGC----------------------------------------------------------------------------------------------------TGTTTCCCTAGT------------------------------------------------------------------------------------------------------------------------------------------CAAT------TT----------------------------------------------------TAAAAACCATT---GACTAAAATATAAATAC-----TTAATTTTCCAGCTCTTCTCGTACAAATATTTCTGGCATGGCATTCATAGGACTTTGCTCTC--
droEre2 scaffold_4770:3596833-3597135 - ATTTTGGC---------------------------GATAG-GACTCCTGGTAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTGA----------------------------------TG-TGTAAATT-----------------------AAATGTCTGTTTTAAGCTTGAAGATTAAGATGCATTGCAGCTTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGTATTCCT-AACCAGT---ACAT-A------------------------------------------------------------------------CA-GGTTAACCTGTACTTAC---TCAG-AACTAAAAGCT--------------------------------------------------------------------------------------------TA------------------------------------------------------------------TGAC-------------------------------------------------------------------------------------------------------------------------------------------------AGTCGATGCTTTG-------ATA---------------------------------------------------------------------A--T-----T---T--------------------------------------------------------AATCGTTGAAAAATCGTTTAAAACTAAAATATAAATAC-----CTCATTTTGCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATCCATAGGACTTTGCTCTC--
droYak3 v2_chr3R_random_107:77-437 - ATTTTGGC---------------------------GATAG-GACTCCTGGCAA--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTAG----------------------------------GG-AATAAATTACCACTAAGTTAATTTTGTTTTAAAATGTCTGTTTTAAGCTTG---------ATGCATTCATGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAG-AACTAAAAGCTATTAATAGTCGAACTTAATG--------TATGATATCAGCTTCCAATTTATGATTTATTATGTTTACGT--TTTATTGCATGG-----------TATCAGC---TTCCAATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTATG-------------------------------------------------------------------------TATACGT-------------TTTTTTAAATAGACAAT------AT----------------------------------------------------GGAATATACTT---AACTAAATTATAAATAC-----TTCACTTTTCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATTCACAGGACATTGCTCTC--
droEug1 scf7180000409760:237371-237642 - ACTTTGGC---------------------------GATAG-GACTCCTGGTAG--------GAAGACCATCTTGGAGTACAGTGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGCTGAAAAAGATATACAAAAATACTATTAGTTTTAATACAGAAAT-----------------TTAGTTT--T-TAGAGTTC--------ATTTT---------GAAGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTGTTAACAAAAATCATT---ACTTTACAGGAAATTAATATT-------------------------------------------------------AAACTT-----------CTTACTATTATTTTCCT-AAT-------------------------------AATATTA-------------------------------------------------------------ACATCACATCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACAGCTCTTCTCGTACAAATATTTCTGGCACGGCATCCAAAGGACTTTGCTCTC--
droBia1 scf7180000302155:1247319-1247444 + TTATGCTA---------------------------TAC---AACTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTCGGCATTTAAAGATTAGTACAACAAT-------------------------------------------------------------------------CAAACTA-------------A---------------------------------------------------------------------------------------------------------ACCTTTCTTTGCTCTTCAGATCTTCAGCTACAAGCTATTCTGGCACGGCATCCACAGAGCGGTCCTCTC--
droTak1 scf7180000415875:547734-548160 - ACTTCGGC---------------------------GGAAGCGACCCCTCGTCCATGTCGCCGGAATCCTTAAAGGCTTATTGCGAGG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGATGGGG----------------------------------TA-AAGAT------------------------------ATTTATTTA--------------------------------------------------------TTCATTCTACGTCCCTTATTTGAAGTTTATCTTTATAAACAGAC-TTTGTATTGCATTTGTAACTTATCCACTTGCATTAAAGTATTGATAATGATTTCTGATATCTATTTTTATATTTCCTACTATTTAAATAACATATGATTTGTAAGAATGTATACTATGTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------A---TAAT-TTCTAAAAGAT--------------------------------------------------------------------------------------------AA------------------------------------------------------------------TCAC----------------------------------------------------------------------------------------------------------------------------------------------AG-------------------------------------A--------------------------------------G---TCCCTTGTTTTCT-TT------T---CAATTTAGATTTTTTGATTGATTCACTTTAAAAATATATTTTTTGATTGGTTTATTTTTCTGTTT---------------------------AAT-----AATTTTTTTCAGTACGCCAGCTACAAGGTCTTCTGGCATCCCATCCTGAAAACGCTGAAGTCCC
droEle1 scf7180000491104:1017367-1017819 + ACTTTGGC---------------------------GACAG-AACTCCTAGCAG--------GAAGACCATATTGGAGTACAGTGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCAAA----------------------------------GAAA------------------------------------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CTTAGT-GGTTTAACGAACAC-A-----------TAAGTTTGTTAGACTTCAAGTCAGCTGTACTAAAGATAAATCATTGAAATTATTAAA---------ATTTTATGCAG-------GG----ACTTTAAACATTTTATA-------------TAAAAAAG----------------------TTTTCTTTTACTCTTAAGTTATTTAATTCAGAG-----------GATCAAC---AA---------------AAAT--TATACATTTA-----------------------ACGCGACTTGGTCCTTGAAATGTGTTAATACATTACCTTATTTCCGATTGACAAGAATTTTTAACTAGATCAATGTGAAAGTAACAAGAAATTCAGCAAAAAACTGATTCCTAA---------------------------------A-------------------------------------------------------------------------AAAA-----------------------------CAAT------TT----------------------------------------------------TTAAAATG------AATTAC--TATAAATGC---CCCTTTTATTTCAGCTCTTCTCGTACAAATACTTCTGGCACAGCATCCACAGGACTTTGCTCTC--
droRho1 scf7180000777138:5944-6253 + ACTTCGGA---------------------------GATTC-CTTACCCAGTTC--------AGAGCGCTTCATGAATATCCTCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGTAGATCAGCGT-----------------------------TC-AAAAT------------------------------ATCTATTCA--------------------------------------------------------TAGA---------------------------TATCCAATTAGAAAAATGAATTTCCTA-TAACGTTGA------------------------------------------------------------------------------------------CTTT----CGG-AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTTAATTGAACATAT-----------------------------TTTATAAGTTTATTAATTAATTTATGAGTTTTAGAAATAATAGAACAGCCTACATACATAAATGTAA-----------------------------CCCT------CT----------------------------------------------------ACAAT---GTT---TAATAATCTAACCGAAC-----TCTTTTTCGTAGTTCTACTCGTATAAGGTCTTCTGGCATGGCTTCAATCGCGCTTTGAA--C--
droFic1 scf7180000454063:265307-265701 + ACTTCGGC---------------------------GGAAGCGACCCCTCGTCCATGTCGCCGGATTCCTTAAAGGCCTATTGCGAGGTGAGGTTTTGGTAC------TAAAATTGT------TAACAAAACTGTTCCACAAAAATTCCATATTCTTTTACCAAATCACTGGTCTAAAATTAATTTACGCCCCTTTGTGTTAGATGGTTCGACCTATAAATTATTAGAATGTCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT----AAATAATTTTGCTGGTCTCAATACAAAATAATAATATTAGAAAAATG-----------------------------------AATT-------------------------------------------------------AATTT-------------------------------------------------------------------------------------------CCTGATTCTTATGT--CTTAACTTATGACAAAATACTTATATCAGC---TTATAGCCTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAACATT-------------------------------------------------------------------------CAAATGA-------------T--------------------------------------------------------------------------------------------------------TAT-T---TTCTTTTCTTAGTACGCCAGCTACAAGGTGTTCTGGCATCCCATCTTGAAAACGCTGAAGTC--
droKik1 scf7180000302706:88664-88764 - ATTACGGC---------------------------GATAA-GACGCCGAGTCT--------AGACACCCTGCACGAGTACCTTCAGG-----------------------------------------------------------------------------------------------------------------------------------------------TGGGTGATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATCTTTCTTAGCACAGCTGG-GTTATATAACGTATTT--
droAna3 scaffold_13340:3095810-3096105 - ACTACGGC---------------------------GACAA-AACACCCAGTCT--------AGACACATTGCATGAGTACCTCCAGGTGAGAGTTATATATTTTTAAAAAATTCAACAATATCGGAAAG-----------------------------------------------------------------------------------------------------TCA-----------GA-----------------------TACCGGAAA------------------------------------------------------TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------CTTTAC-AGTCTAA---GCAA-A-----------TAAATTTATCAGCGTTG--------------------------------------CGAAACTT-GCTTATCAATTGA-----------------------------------------------------------------------------------------------------------------------------CGTTATAAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTTAAATATAAATAT-----------------------------TTTG---GGCTATCAAATAAATTATTAA--------------------------------------AGGT-------------A---------------------------------------------------------------------------------------------------------TCTATTATTTTGGTTTCAGATGGTCTCTCACGAGTACTTCTGGTTCCCGATCTACCGCACAGTATTGTC--
droBip1 scf7180000396712:1255216-1255500 + ACTACGGC---------------------------GACAA-AACCCCCAGTCT--------AGACACTCTGCACGAGTACCTACAGGTGAGAGTTATATATTTATAAAAAACTCAA------CGGAAAA-----------------------------------------------------------------------------------------------------TCA-----------GA-----------------------TACCGGAAA------------------------------------------------------TTGGGTTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCTAA---GCAA-A-----------TAAATTTATCAGTAGTG--------------------------------------CAAAATTG-GCTTATCATGTGG-----------------------------------------------------------------------------------------------------------------------------CAATATAAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTGAATATATAT-----------------------------ATTTTA-------ATAAAATAAATCACTAA--------------------------------------A-----------------------------------------------------------------------------------------------------------------TCTGTTAATAT-----TTTGTGTTGCAGATGGTCTCTCACGAGTACTTTTGGTTCCCGATCTACCGCACAGTATTGTC--
dp5 2:26731754-26731811 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTTTTCGTACAAATATTTCTGGCATGGCATCCAAAGAACATTGCTATC--
droPer2 scaffold_6:2049727-2049784 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTTTTCGTACAAATATTTCTGGCATGGCATCCAAAGGACATTGCTATC--
droWil2 scf2_1100000004902:7247353-7247456 - ACTTTGGA---------------------------AAAGC-TACGCCAAATTC--------GGAGTTGATGTTAAACTTCTTGGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTAATTG----------------------------------TA-A------TCGAGTCTAGTTATGAAA--CTTTGAAAGTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTA--
droVir3 scaffold_12855:6261367-6261677 - AGTTCAGCAACAAGCTGATCAAATTGTACTTTGGTGATGC-AACACCCAGTCA--------AGAGCACATCATGAATTTTTTGGATG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGTTTGAA---------------------------------------------------------------------ACAGTTTCTTGTATCCTGT---------ACCC--------------------------------------TGTTCAAA---------------------------ATGG-----------------------------------------------------------------------------------------------------------------------------------------------GAAAAGGGAATAATAGTTTTGTGTGAATG-----------------------------------TATG-------------------------------------------------------TAAT-AGTTATCATGCGG-----------------------------------------------------------------------------------------------------------------------------CATCTCTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGGTCTTAGTCGGACACTCCCGACTAGAGCACTTATTATTCCATATTCTG-------TTA---------------------------------------------------------------------A--A-----C---T----------------------------------------------------------------------------------------TATTTC-----TGCTTTTTTCAGTACTATTCTTATAAGATCTTCTGGCATGGCTTTCATCGAACTTTGCAAGC--
droMoj3 scaffold_6540:6570024-6570117 - TATTAAGA---------------------------TGTC--TGGCTTTAATCCATG-CACTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTACAGCTCTGCTCGTATAAATATTTCTGGCACGGCATCCATCGCACCCTGCTGTC--
droGri2 scaffold_14906:7841437-7841821 + ACTTTGGA---------------------------GATAA-GCAACCTGGTCG--------GGACACTATACTTGAATACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTATATG----------------------------------T---ATAATTTGGAGATCAGTTAAATAT--TTATGAAGCTGAATACTTAAT---------------TATTACTTCT---------TTTTTTTCAAATATATTCCTTATTTAGCAACTAATAATAGAAATAAAAATATTTAAGTAGAA-TTTGAATGACATAAAAATGTTAA------------------------------------------------------------------------------------------TTGT----TGA-AA-------------------A----------------------CTTGCC-TGTCTAA---ACAA-A-----------TGTA---------------------------------------------------------AG-A-TAAATTTTTACTG-----CCA---------------TAA--------------------------------------------------------------------------AAGTCAAG--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAGATGGATATAAC-GAATTTTGTATACAT-------------------------------------A--------------------------------------G---TGCCAAGTTTACT-AA------A---T----------------------------------------------------------------------------------------CGTTTT-----TGTTTTCTGCAGCTCTGCTCCTACAAATACTTCTGGCACGGGATCCATCGCACACTGCTGTC--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCGA----------------------------------TA-CATAAATTGGCATGAAGTTAAGTTT--TTTAAAGTTTTTCTTATTAACTTGAAGATTGAGATGCATTACGGCTTCTAATGA--TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AATCTTTTCAA-AATCTTT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-AACTAAAAGCTATTAGTAATCTATCTTATTG--------TATGATA-------------------------------------------------------------TCAGTACATCTCAGTTA-------------------TCTTATCTTATTATTCTCTTATTTATCAAGGC-------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---GACTAAAATAAAATTAC-----TTAATTTTCCAGCTCTTCTCGTACAAATACTTCTGGCACGGCATTCATAGGACTTTGCTCTC--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................ATAG-GACTCCTGGCAG--------GAAGACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------------------------------------------ACTTAC---GCAG-AACTAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAC---GCAG-AACTAAAAGCTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................CCTGGCAG--------GAAGACCATATTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
droSim2
ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCGA----------------------------------TA-AATAAATTGTCAGGAAGTAAAGATT--TTTAAAATTTCTCTTATTAACTTGAAGATTGAGATGCATTACGGCTTCTAATGAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------AATCTTTTCAA-AATCTTT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-AACTAAAAGCTATTAGTAATCTATCTTATTG--------TATAATA-------------------------------------------------------------TCAGTACATCTCAGTTA-------------------TCTTATCTTATTATTATCTTATTTATCTAGGC-------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT---GACTAAAATAAAATTAC-----TTAATTTTCCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATTCATAGGACTTTGCTCTC--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCATTCATAGGACTTTGCT.....2311.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCATTCATAGGACT..........1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCGTACAAATATTTCTGGC...........................2211.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTATTTATCTAGGC-------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT---......................................................................................2211.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATAGGACTTTGCTCT...1911.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCATTCATAGGACTTTGC......2111.00110000000000000000
dm3
ATTTCGGC---------------------------GATAG-GACTCCTGGCAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTCAA----------------------------------AAAAATAAATTGGAACGAAGTTAAGCTT--TTTTAAAAGTCTCTTATTAACGTGAAGATTGAGATGCATTATGGCTTTTAATGGTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATGGCTTTCAA-AATCATT---ACAT----------------------------------------------------------------------------------------ACTTAC---GCAG-TACTAAA----------------------------------TAATA-------------------------------------------------------------TCAGTACATCTCAGTTTATAATTTGTAATTAAATACTCTTA-----------------------ACGC----------------------------------------------------------------------------------------------------TGTTTCCCTAGT------------------------------------------------------------------------------------------------------------------------------------------CAAT------TT----------------------------------------------------TAAAAACCATT---GACTAAAATATAAATAC-----TTAATTTTCCAGCTCTTCTCGTACAAATATTTCTGGCATGGCATTCATAGGACTTTGCTCTC--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................GACTCCTGGCAG--------GAAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATATTTCTGGCATGGCAT....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTCATAGGACTTTGCTC....2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTCGGC---------------------------GATAG-GACTCCTGGCAG--------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCATGGCATTCATAGGA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGGCATGGCATTCA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................ACTCCTGGCAG--------GAAGACCATATTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATACTCTTA-----------------------ACGC----------------------------------------------------------------------------------------------------TGT.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTTTGGC---------------------------GATAG-GACTCCTGGTAG--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTGA----------------------------------TG-TGTAAATT-----------------------AAATGTCTGTTTTAAGCTTGAAGATTAAGATGCATTGCAGCTTTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATGTATTCCT-AACCAGT---ACAT-A------------------------------------------------------------------------CA-GGTTAACCTGTACTTAC---TCAG-AACTAAAAGCT--------------------------------------------------------------------------------------------TA------------------------------------------------------------------TGAC-------------------------------------------------------------------------------------------------------------------------------------------------AGTCGATGCTTTG-------ATA---------------------------------------------------------------------A--T-----T---T--------------------------------------------------------AATCGTTGAAAAATCGTTTAAAACTAAAATATAAATAC-----CTCATTTTGCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATCCATAGGACTTTGCTCTC--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................GGTAG--------GAAGACCATATTGGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
ATTTTGGC---------------------------GATAG-GACTCCTGGCAA--------GAAGACCATATTGGAGTACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTAG----------------------------------GG-AATAAATTACCACTAAGTTAATTTTGTTTTAAAATGTCTGTTTTAAGCTTG---------ATGCATTCATGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAG-AACTAAAAGCTATTAATAGTCGAACTTAATG--------TATGATATCAGCTTCCAATTTATGATTTATTATGTTTACGT--TTTATTGCATGG-----------TATCAGC---TTCCAATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTATG-------------------------------------------------------------------------TATACGT-------------TTTTTTAAATAGACAAT------AT----------------------------------------------------GGAATATACTT---AACTAAATTATAAATAC-----TTCACTTTTCAGCTCTTCTCGTACAAATATTTCTGGCACGGCATTCACAGGACATTGCTCTC--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................ACTCCTGGCAA--------GAAGACCATATTGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00403000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCTCGTACAAATATT.................................1920.50100000100000
droEug1
ACTTTGGC---------------------------GATAG-GACTCCTGGTAG--------GAAGACCATCTTGGAGTACAGTGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGCTGAAAAAGATATACAAAAATACTATTAGTTTTAATACAGAAAT-----------------TTAGTTT--T-TAGAGTTC--------ATTTT---------GAAGCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTGTTAACAAAAATCATT---ACTTTACAGGAAATTAATATT-------------------------------------------------------AAACTT-----------CTTACTATTATTTTCCT-AAT-------------------------------AATATTA-------------------------------------------------------------ACATCACATCTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTACAGCTCTTCTCGTACAAATATTTCTGGCACGGCATCCAAAGGACTTTGCTCTC--SizeHit CountTotal NormTotal
No Reads
droBia1
TTATGCTA---------------------------TAC---AACTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTCGGCATTTAAAGATTAGTACAACAAT-------------------------------------------------------------------------CAAACTA-------------A---------------------------------------------------------------------------------------------------------ACCTTTCTTTGCTCTTCAGATCTTCAGCTACAAGCTATTCTGGCACGGCATCCACAGAGCGGTCCTCTC--SizeHit CountTotal NormTotal
No Reads
droTak1
ACTTCGGC---------------------------GGAAGCGACCCCTCGTCCATGTCGCCGGAATCCTTAAAGGCTTATTGCGAGG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGATGGGG----------------------------------TA-AAGAT------------------------------ATTTATTTA--------------------------------------------------------TTCATTCTACGTCCCTTATTTGAAGTTTATCTTTATAAACAGAC-TTTGTATTGCATTTGTAACTTATCCACTTGCATTAAAGTATTGATAATGATTTCTGATATCTATTTTTATATTTCCTACTATTTAAATAACATATGATTTGTAAGAATGTATACTATGTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------A---TAAT-TTCTAAAAGAT--------------------------------------------------------------------------------------------AA------------------------------------------------------------------TCAC----------------------------------------------------------------------------------------------------------------------------------------------AG-------------------------------------A--------------------------------------G---TCCCTTGTTTTCT-TT------T---CAATTTAGATTTTTTGATTGATTCACTTTAAAAATATATTTTTTGATTGGTTTATTTTTCTGTTT---------------------------AAT-----AATTTTTTTCAGTACGCCAGCTACAAGGTCTTCTGGCATCCCATCCTGAAAACGCTGAAGTCCCSizeHit CountTotal NormTotal
No Reads
droEle1
ACTTTGGC---------------------------GACAG-AACTCCTAGCAG--------GAAGACCATATTGGAGTACAGTGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCAAA----------------------------------GAAA------------------------------------------------------ATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------CTTAGT-GGTTTAACGAACAC-A-----------TAAGTTTGTTAGACTTCAAGTCAGCTGTACTAAAGATAAATCATTGAAATTATTAAA---------ATTTTATGCAG-------GG----ACTTTAAACATTTTATA-------------TAAAAAAG----------------------TTTTCTTTTACTCTTAAGTTATTTAATTCAGAG-----------GATCAAC---AA---------------AAAT--TATACATTTA-----------------------ACGCGACTTGGTCCTTGAAATGTGTTAATACATTACCTTATTTCCGATTGACAAGAATTTTTAACTAGATCAATGTGAAAGTAACAAGAAATTCAGCAAAAAACTGATTCCTAA---------------------------------A-------------------------------------------------------------------------AAAA-----------------------------CAAT------TT----------------------------------------------------TTAAAATG------AATTAC--TATAAATGC---CCCTTTTATTTCAGCTCTTCTCGTACAAATACTTCTGGCACAGCATCCACAGGACTTTGCTCTC--SizeHit CountTotal NormTotal
No Reads
droRho1
ACTTCGGA---------------------------GATTC-CTTACCCAGTTC--------AGAGCGCTTCATGAATATCCTCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGTAGATCAGCGT-----------------------------TC-AAAAT------------------------------ATCTATTCA--------------------------------------------------------TAGA---------------------------TATCCAATTAGAAAAATGAATTTCCTA-TAACGTTGA------------------------------------------------------------------------------------------CTTT----CGG-AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTTAATTGAACATAT-----------------------------TTTATAAGTTTATTAATTAATTTATGAGTTTTAGAAATAATAGAACAGCCTACATACATAAATGTAA-----------------------------CCCT------CT----------------------------------------------------ACAAT---GTT---TAATAATCTAACCGAAC-----TCTTTTTCGTAGTTCTACTCGTATAAGGTCTTCTGGCATGGCTTCAATCGCGCTTTGAA--C--SizeHit CountTotal NormTotal
No Reads
droFic1
ACTTCGGC---------------------------GGAAGCGACCCCTCGTCCATGTCGCCGGATTCCTTAAAGGCCTATTGCGAGGTGAGGTTTTGGTAC------TAAAATTGT------TAACAAAACTGTTCCACAAAAATTCCATATTCTTTTACCAAATCACTGGTCTAAAATTAATTTACGCCCCTTTGTGTTAGATGGTTCGACCTATAAATTATTAGAATGTCTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTT----AAATAATTTTGCTGGTCTCAATACAAAATAATAATATTAGAAAAATG-----------------------------------AATT-------------------------------------------------------AATTT-------------------------------------------------------------------------------------------CCTGATTCTTATGT--CTTAACTTATGACAAAATACTTATATCAGC---TTATAGCCTATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAACATT-------------------------------------------------------------------------CAAATGA-------------T--------------------------------------------------------------------------------------------------------TAT-T---TTCTTTTCTTAGTACGCCAGCTACAAGGTGTTCTGGCATCCCATCTTGAAAACGCTGAAGTC--SizeHit CountTotal NormTotal
No Reads
droKik1
ATTACGGC---------------------------GATAA-GACGCCGAGTCT--------AGACACCCTGCACGAGTACCTTCAGG-----------------------------------------------------------------------------------------------------------------------------------------------TGGGTGATAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATCTTTCTTAGCACAGCTGG-GTTATATAACGTATTT--SizeHit CountTotal NormTotal
No Reads
droAna3
ACTACGGC---------------------------GACAA-AACACCCAGTCT--------AGACACATTGCATGAGTACCTCCAGGTGAGAGTTATATATTTTTAAAAAATTCAACAATATCGGAAAG-----------------------------------------------------------------------------------------------------TCA-----------GA-----------------------TACCGGAAA------------------------------------------------------TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------CTTTAC-AGTCTAA---GCAA-A-----------TAAATTTATCAGCGTTG--------------------------------------CGAAACTT-GCTTATCAATTGA-----------------------------------------------------------------------------------------------------------------------------CGTTATAAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTTAAATATAAATAT-----------------------------TTTG---GGCTATCAAATAAATTATTAA--------------------------------------AGGT-------------A---------------------------------------------------------------------------------------------------------TCTATTATTTTGGTTTCAGATGGTCTCTCACGAGTACTTCTGGTTCCCGATCTACCGCACAGTATTGTC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................AA------------------------------------------------------TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------CTTTAC-AGTCTAA---GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002020000
........................................................................................................................ATCGGAAAG-----------------------------------------------------------------------------------------------------TCA-----------GA-----------------------TACCGGAAA------------------------------------------------------TCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
...................................GACAA-AACACCCAGTCT--------AGACACATTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
ACTACGGC---------------------------GACAA-AACCCCCAGTCT--------AGACACTCTGCACGAGTACCTACAGGTGAGAGTTATATATTTATAAAAAACTCAA------CGGAAAA-----------------------------------------------------------------------------------------------------TCA-----------GA-----------------------TACCGGAAA------------------------------------------------------TTGGGTTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCTAA---GCAA-A-----------TAAATTTATCAGTAGTG--------------------------------------CAAAATTG-GCTTATCATGTGG-----------------------------------------------------------------------------------------------------------------------------CAATATAAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AACAATTGAATATATAT-----------------------------ATTTTA-------ATAAAATAAATCACTAA--------------------------------------A-----------------------------------------------------------------------------------------------------------------TCTGTTAATAT-----TTTGTGTTGCAGATGGTCTCTCACGAGTACTTTTGGTTCCCGATCTACCGCACAGTATTGTC--SizeHit CountTotal NormTotal
No Reads
dp5
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTTTTCGTACAAATATTTCTGGCATGGCATCCAAAGAACATTGCTATC--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATATTTCTGGCATGGC......................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTCTGGCATGGCATCC..................2011.0010100000000
droPer2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTTTTCGTACAAATATTTCTGGCATGGCATCCAAAGGACATTGCTATC--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACTTTGGA---------------------------AAAGC-TACGCCAAATTC--------GGAGTTGATGTTAAACTTCTTGGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTAATTG----------------------------------TA-A------TCGAGTCTAGTTATGAAA--CTTTGAAAGTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AGTTCAGCAACAAGCTGATCAAATTGTACTTTGGTGATGC-AACACCCAGTCA--------AGAGCACATCATGAATTTTTTGGATG-----------------------------------------------------------------------------------------------------------------------------------------------TGAGTTTGAA---------------------------------------------------------------------ACAGTTTCTTGTATCCTGT---------ACCC--------------------------------------TGTTCAAA---------------------------ATGG-----------------------------------------------------------------------------------------------------------------------------------------------GAAAAGGGAATAATAGTTTTGTGTGAATG-----------------------------------TATG-------------------------------------------------------TAAT-AGTTATCATGCGG-----------------------------------------------------------------------------------------------------------------------------CATCTCTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGGTCTTAGTCGGACACTCCCGACTAGAGCACTTATTATTCCATATTCTG-------TTA---------------------------------------------------------------------A--A-----C---T----------------------------------------------------------------------------------------TATTTC-----TGCTTTTTTCAGTACTATTCTTATAAGATCTTCTGGCATGGCTTTCATCGAACTTTGCAAGC--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATAAGATCTTCTGGCATGGC......................2312.002000200000000000000000000000000000000000000000000000000000000000
........AACAAGCTGATCAAATTGTACTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................ACTTTGGTGATGC-AACACCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGGCATGGCTTTCATC...............2011.001000000000000000000000000000000000000000000000000000000000001000
..........CAAGCTGATCAAATTGTACTTTGGTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTCTGGCATGGCTTT...................1911.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGCTTTCATCGAACT..........1911.001001000000000000000000000000000000000000000000000000000000000000
..............................TTGGTGATGC-AACACCCAGTCA--------AGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATCGAACTTTGCAAG...1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGGTCTTAGT........................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................GATGC-AACACCCAGTCA--------AGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......GCAACAAGCTGATCAAATTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
...................................GATGC-AACACCCAGTCA--------AGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................GATGC-AACACCCAGTCA--------AGAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATTCTTATAAGATCTTCTGGCAT.........................2711.001000000000000000000000000000000000000000000000000000000000000010
..........CAAGCTGATCAAATTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATCATGCGG-----------------------------------------------------------------------------------------------------------------------------CATCTCTGAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------CCT.................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...............................................CAGTCA--------AGAGCACATCATGAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
........AACAAGCTGATCAAATTGTACTTTGGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
TATTAAGA---------------------------TGTC--TGGCTTTAATCCATG-CACTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTACAGCTCTGCTCGTATAAATATTTCTGGCACGGCATCCATCGCACCCTGCTGTC--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATATTTCTGGCACGGCATC...................2311.001000001
droGri2
ACTTTGGA---------------------------GATAA-GCAACCTGGTCG--------GGACACTATACTTGAATACAGCGATG-----------------------------------------------------------------------------------------------------------------------------------------------TAAGTATATG----------------------------------T---ATAATTTGGAGATCAGTTAAATAT--TTATGAAGCTGAATACTTAAT---------------TATTACTTCT---------TTTTTTTCAAATATATTCCTTATTTAGCAACTAATAATAGAAATAAAAATATTTAAGTAGAA-TTTGAATGACATAAAAATGTTAA------------------------------------------------------------------------------------------TTGT----TGA-AA-------------------A----------------------CTTGCC-TGTCTAA---ACAA-A-----------TGTA---------------------------------------------------------AG-A-TAAATTTTTACTG-----CCA---------------TAA--------------------------------------------------------------------------AAGTCAAG--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAGATGGATATAAC-GAATTTTGTATACAT-------------------------------------A--------------------------------------G---TGCCAAGTTTACT-AA------A---T----------------------------------------------------------------------------------------CGTTTT-----TGTTTTCTGCAGCTCTGCTCCTACAAATACTTCTGGCACGGGATCCATCGCACACTGCTGTC--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................CAACCTGGTCG--------GGACACTATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...................................GATAA-GCAACCTGGTCG--------GGACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110

Generated: 05/18/2015 at 12:04 AM