ID:

dse_1483

 Coordinate:

scaffold_6:3388519-3388669 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.1 -10.1

Flybase annnotation

CDS [Dsec\GM10482-cds]; exon [dsec_GLEANR_10514:2]; snoRNA [Dsec\snoRNA:GM27610-RA]; exon [Dsec\snoRNA:GM27610:1]; intron [Dsec\GM10482-in]

No Repeatable elements found

Sense Strand Reads

############################################################################################################################################-------------------------------------------------------------##################################################
CTTAAGTTCTAGACAGGTAGTTTAGTCTCTGTCTTACAGAACACCCAAATGAAATGAAACACGCGCTATTGTCGACCCAGGAGCCACTTAGGTCTAAGCTATATGCCGTGGTGACGACGTCTTTAGTAATCTGAGCGCAACATATAGAGAATTCCAGCTCTATAACTTGCTTTCATTTCTAATCGCCTTCCTTTTTTTCAGGCTGAACGCTCCAAGACCAAGGGCAAGGGATGGTTTAATATGCCCGCCAC
************************************************************************..............(((((((....((((.(((.(((....))).)))...)))).))))))).******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 V115
head
 M054
female body
........................................................................CGACCCAGGAGCCACTTAG................................................................................................................................................................ 19 0 1 9.00 9 9 0 0 0
...............................................................................................................TGACGACGTCTTTAGTAATCTGAGC................................................................................................................... 25 0 1 6.00 6 1 4 1 0
...........................................................CACGCGCTATTGTCGACCCAGGAGC....................................................................................................................................................................... 25 0 1 5.00 5 5 0 0 0
.................................................................................................................ACGACGTCTTTAGTAATCTGAGC................................................................................................................... 23 0 1 4.00 4 0 2 2 0
..................................................................................................................CGACGTCTTTAGTAATCTGAGC................................................................................................................... 22 0 1 3.00 3 1 1 1 0
........................................................................CGACCCAGGAGCCACTTA................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0
............................................................ACGCGCTATTGTCGACCCAGGA......................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0
......................................................................................................ATGCCGTGGTGACGACGTC.................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
..................................................................TATTGTCGACCCAGGAGC....................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
..............................................................................................................GTGACGACGTCTTTAGTAATCTGAGC................................................................................................................... 26 0 1 1.00 1 0 1 0 0
...........................................................CACGCGCTATTGTCGACCC............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
............................................................................................................TGGTGACGACGTCTTTAGTAATCTGAGC................................................................................................................... 28 0 1 1.00 1 0 1 0 0
...............................................................................................................TGACGACGTCTTTAGTAATCTGAGCGC................................................................................................................. 27 0 1 1.00 1 1 0 0 0
..................................................................................................CTATATGCCGTGGTGACGACGT................................................................................................................................... 22 0 1 1.00 1 0 0 0 1
......................................................................................................................GTCTTTAGTAATCTGAGC................................................................................................................... 18 0 1 1.00 1 1 0 0 0
...................................................................ATTGTCGACCCAGGAGCCACTTA................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0
...............................................................................................................TGACGACGTCTTTAGTAATCTCAGC................................................................................................................... 25 1 1 1.00 1 0 1 0 0
......................................................................GTCGACCCAGGAGCCACTTAG................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
...............................................................................GGAGCCACTTAGGTCTAGC......................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0
.....................................................................................................................CGTCTTTAGTAATCTGAGCG.................................................................................................................. 20 0 1 1.00 1 1 0 0 0
...............................................AATGAAATGAAACACGCGCTAA...................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 1
..........................................................................................................CGTGGTGACGACGTCTTTGGTAATCTG...................................................................................................................... 27 1 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................................TCCAAGACCAAGGGCAAGGGA.................... 21 0 1 1.00 1 1 0 0 0
.........................................................AACACGCGCTATTGTCGACCCAGGAGC....................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
...................................................................ATTGTCGACCCAGGAGCCAC.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
........................................................................CGACCCAGGAGCCACTTAGGTCTAAG......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
........................................................................CGACCCAGGAGCCACTTAGGT.............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
..............................................................................................................GTGACGACGTCTTTAGCAATCTGAGCG.................................................................................................................. 27 1 1 1.00 1 0 0 1 0
...............................................AATGAAATGAAACACGCGCTATTGTCG................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1
...........................................................CACGCGCTATTGTCGCCCCAGGAGC....................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
.....................................................ATGAAACACGCGCTATTGT................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
.....................................................................................................................CGTCTTTAGTAATCTGAGC................................................................................................................... 19 0 1 1.00 1 0 0 1 0
................................................................................................................GACGACGTCTTTAGTAATCTGAGC................................................................................................................... 24 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................................................................................GCAAGGGATGGTTTAATATG........ 20 0 1 1.00 1 1 0 0 0
...................................................................................................................GACGTCTTTAGTAATCTGAGC................................................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................CGACCCAGGAGCTACTTAG................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0
..........................................................ACACGCGCTATTGTCGACCCAGGA......................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...........................................................CACTCGCTATTGTCGACCCAGG.......................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0
..............................................................................................................GTGACGACGTCTTTAGTAATCTGAGCG.................................................................................................................. 27 0 1 1.00 1 1 0 0 0
...............................TCTTACAGAACACCCAAATGAAATGAA................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0
.........................................................................................................CCGTGGTGACGACGTCTTTAGTAA.......................................................................................................................... 24 0 1 1.00 1 0 0 0 1
...............................................AATGAAATGAAACACGCGCTATTG.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
..........................................................ACACGCGCTATTGTCGACCCAGGAGC....................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.........................................................................................................CCGTGGTGACGACGTCTTTAGTAATCTG...................................................................................................................... 28 0 1 1.00 1 0 1 0 0
...................................................................................................................................TGAGCGCAACACATAGAGA..................................................................................................... 19 1 1 1.00 1 1 0 0 0
...............................................................................................................TGACGACGTCTTTAGTAATCTGAGCG.................................................................................................................. 26 0 1 1.00 1 1 0 0 0
....................................................................................................................ACGTCTTTAGTAATCTGAGC................................................................................................................... 20 0 1 1.00 1 0 0 1 0
.....................TTAGTCTCTGTCTTACAGAA.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0
......................................................................................................ATGCCGCGGTGAATACGTC.................................................................................................................................. 19 3 14 0.14 2 0 2 0 0
...............................................................................................................TGACGACGGCTTTAGTGGT......................................................................................................................... 19 3 7 0.14 1 0 0 0 1

Anti-sense strand reads

GAATTCAAGATCTGTCCATCAAATCAGAGACAGAATGTCTTGTGGGTTTACTTTACTTTGTGCGCGATAACAGCTGGGTCCTCGGTGAATCCAGATTCGATATACGGCACCACTGCTGCAGAAATCATTAGACTCGCGTTGTATATCTCTTAAGGTCGAGATATTGAACGAAAGTAAAGATTAGCGGAAGGAAAAAAAGTCCGACTTGCGAGGTTCTGGTTCCCGTTCCCTACCAAATTATACGGGCGGTG
*******************************************************************************************************************..............(((((((....((((.(((.(((....))).)))...)))).))))))).************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 V114
embryo
 M054
female body
 V115
head
....................................................................................................................................................................TGAACGAAAGTCAAGATTAC................................................................... 20 2 2 60.00 120 80 25 7 8
.....................................................................................................................................................................GAACGAAAGTCAAGATTAC................................................................... 19 2 4 3.25 13 8 4 1 0
....................................................................................................................................................................TGAACGAAAGTCAAGATT..................................................................... 18 1 1 3.00 3 3 0 0 0
.................................................................................................................................................................TTATGAACGAAAGTCAAGATTA.................................................................... 22 3 2 2.50 5 3 1 1 0
.....................................................................................................................................................................GAACGAAAGTCAAGATTA.................................................................... 18 1 1 1.00 1 1 0 0 0
...................................................................................................................................................................ATGAACGAAAGTCAAGATTAC................................................................... 21 3 8 1.00 8 7 0 1 0
...................................................................................................................................................................ATGAACGAAAGTCAAGATTA.................................................................... 20 2 2 0.50 1 0 0 1 0
.................................................................................................................................................................TAGTGAACGAAAGTCAAGATTAC................................................................... 23 3 2 0.50 1 1 0 0 0
....................................................................................................................................................................TGAACGAAAGTTAAGATTAC................................................................... 20 2 3 0.33 1 0 1 0 0
..........................................................................................................................................................................................................GACTTGCGAGCTTGTGGT............................... 18 2 3 0.33 1 0 0 0 1
......................................................................................................................................................................AACGAAAGTCAAGATTAC................................................................... 18 2 15 0.27 4 2 2 0 0
....................................................................................................................................................................TGAACGAAAGTCAGGATTAC................................................................... 20 3 7 0.14 1 0 0 1 0
....................................................................................................................................................................TGAGCGAAAGTCAAGATTAC................................................................... 20 3 9 0.11 1 1 0 0 0
.......................................................................AGCTGGGGCCTCGGAGATT................................................................................................................................................................. 19 3 10 0.10 1 0 0 1 0
.....................................................................AAAGCTGGGGCCTTGGTGA................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0
.......................TCTGTGTCAGAATGTCTTGT................................................................................................................................................................................................................ 20 3 14 0.07 1 1 0 0 0
....................................................................................................................................................................TGAACGAAAGTCAATATT..................................................................... 18 2 16 0.06 1 0 0 0 1
....................................................................................................................................................................TGAACGAAAGTCAAGGTTAC................................................................... 20 3 18 0.06 1 1 0 0 0
......................................................................................................................................................................................AGCGGAAGGAAAAGAGGT................................................... 18 2 20 0.05 1 0 0 1 0
......................................................................CAGCTGGGGCCTTGGAGA................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0
....................................................................................................................................................................AGAACGAAAGTCAAGATTAC................................................................... 20 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_6:3388469-3388719 - dse_1483 CTTAAGTTCT-AGACAGGTAGTTTAGTCTCTGTCTTACAGAACAC-----CCAAA-T---------GAAATGA----------------AACAC--GCGCTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCTAAGCTATA---TGCCGT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------AGAGAA---TTCCAGCTCTAT--AACT-----------------------------------TG----------C-TTTCATTTCTAATCGCC--TTCC-----TTTTTTTCAGGCTGAACGCTCCAAGACCAAGGGCAAGGGATGGTTTAATATGCCCGCCAC
droSim2 3r:3216901-3217151 - dsi_6737 CTTAAGTCCT-AGACAGATAGTTTAGTCTCTGGCTTACAGAACAC-----CCAAA-A---------GAAATGA----------------AACAC--GCGCTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCTAAGCTATA---TGCCGT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------AGAAAA---TTCCAGCTTTAT--AACT-----------------------------------TG----------C-TTTCATTTCTAATCGCC--TTCT-----TTTTTTTCAGGCTGAACGCTCCAAGACCAAGGGCAAGGGATGGTTTAATATGCCCGCCAC
dm3 chr3R:3298520-3298769 - ATTGAGTCCT-AGACAGATAGTTTAGTCTCTGGTTTACAGAACAC-----CCAAATG---------GAAATGA----------------AACAC--GCGCTTTTGTCGA----CC---------CAGGAGCC--------AGTTAGGTCTAAGCTGTT---TGTCAT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------TGGAAA---TTTCAGACC-CT--ACCT-----------------------------------TG----------C-TTTTATTTTTAATCGCC--TTCC------TTTTTTCAGGCTGAACGCTCAAAGACCAAGGGCAAGGGATGGTTTAATCTGCCCGCCAC
droEre2 scaffold_4770:3563241-3563497 - der_528 CTTAAGTCCT-AGACAGATAGTTTAGTTTCTGGCTTACAGAACAC-----CCAACTA---------GAAATGA----------------AACAC--GCACTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCCAAGCTATT---TGCCAT-GGTGACGACGTCTTTAGTAATCTGAATGCAACATATGTA------TCTGCAGTAAT---TTCCTGCTT-AC--AACT-----------------------------------TG----------C-TGTTATTTCTAATCGCC--TTC-------TTTTTTCAGGCTGAACGCTCCAAGACTAAGGGCAAAGGATGGTTTGATCTGCCCGCAAC
droYak3 3R:7045221-7045482 + dya_965 CTTAAGTCCT-AGACAGATAGTTTAGTTTCTGGCTTACAGAACAC-----CAAAATA---------AAAATGA----------------AACAC--GCACTTTTGTTGA----CC---------CAGGAGCT--------ACTTAGGGCTAAGCTATT---TGCCAT-GGTGACGACGTCTTTAGTAATCTGAATGCAACCTAT----------ATGTAGTAAT---TTTCTGCTTTAC--GGCC-----------------------------------TG----------CCTCTTATTTATATTCGCT--TTCCTTTCTATCCTTTCAGATTGAACGCTCTAAGACCAAGGGCAAAGGATGGTTTAACCTCCCCGCAAC
droEug1 scf7180000409503:30319-30559 + GAGAATGCCA-AGTCAGATAACTAAGTAACTAGCCTACACAATAT-----CATCTTA---------AATGTTA----------------TGAAA--GAACTGTGGTCTA-------------------AATT--------AATTATGTCTGAGAAAGT---TGCCAT-ATTGACGACGACTTTAGTAATCTGAAAACAAGAT----------------GGGCAA---CTTCAGCATTTA------------------TAC--TTT---------------------------A-TTCCTTTCTTAATCGTC--TT--------AATTTTTAGGCTAAAAGCTCCAAAACTAAGGGAGGAGATTGGGCTTACTTTCCTGCCTC
droBia1 scf7180000302155:257705-257946 - GTTAAGCCCC-AGACTGACAACTTAGGCCATGGCTTACAGAACAC-----AAACCTC---------AAAATGA----------------AGCAC--AGTGGATTGTCGA----CG---------CAGGATCC--------ACTTAGGTCTGGG----T---TGCC---ATTGACGACGTCTTTAGTAATCTGACAGCATGAC-----------------GGCAA---CTCCAGCTGACG------------------TTT--TTA---------------------------A-GTCCTTTTCTAATCCTA---TC-----TTATATCTCAGGCTGAACGCGCCAAATCCAAGGGCAAGGGCTGGTATGATTTGCCCGCGAC
droTak1 scf7180000415088:54874-55121 + GTGAAGTCAA-AAACTGGTAATTTAGGCTATGGCTTACAAAACAT-----TACCATC---------AAAATGA----------------AGCAA-----ATATTGTCGA----CC---------CAGGAGAC--------ACTTAGGTCTGAGCTAGT---TGCCCC-ATTGACGACGTCTTTAGTAATCTGAGAAAAATAT----------------AGATAT---AACCAGCTATTG------------------TAT--TTA----------------A----------T-TTCCTTTTCTAATCGCC--TTTC-----TGTTTTTCAGGTTGAACGCGCTCGAACCAAAGGAAAAGGTTGGTTTGATTTGCCCGCCAC
droEle1 scf7180000486649:8067-8317 + GCTAAGTCCA-AGACAGATAAATTTTGCTCTGGCATACAGATAAT-----TTACCAA-----------AA-TA----------------AGCTA--AGACTATTGTCAAAACGCC---------AAGGAGCT--------GCTTAGGCCTGAGCTATT---TGCCAA-ATTGACGACGTCTTTAGTAATCTGAGAACAGGAC----------------CGTCAT---TTTCAGCTCACT------------------TGT--TCTATTTC------------CG--------------GATTCTAATCCTG--TTT-------GTTTTTCAGACTGAACGCGCAAAAACCAAGGGGAGCGGATGGTTTCATTTGCCCGCCAC
droRho1 scf7180000774841:5858-6104 + GTTAAGTCCA-AGACAGATAATTTTGGCTCTGGCTTACAGATCTTA---ATCAAA-A---------GCAAAGA----------------AACAATAGT----ATGTCGGTACACC---------TAG-------------GCCTAGGCCTGAGCTAGT---TGCCGT-ATTGACGACGTCTTTAGTAATCTGAAAGCAGAAA----------------ACCCAT---CCCCAGCTGACA------------------GAT--TCT----------------A----------T-TTTCTTTTCTAATCGTC--TTC-------ATTTTTCAGGCTGAACGCGGTAAAACCAAGGGGAGCGGCTGGTTTAATTTGCCCGCCAC
droFic1 scf7180000453305:22420-22686 - GTAAATATCA-AGAAAGATAATTAAGGCCATGGCTTACAGACCAA-----CAA---C---------AAAATGA----------------AACAG--CGACTGTTATCCGTCCACTT----ACCC-CAGAGCTATGTGTATATTTACTTCTGAATCAGG---TGCCAC-ATTGACGACTTCTTTAGTAATCTGAAAGAATTTC----------------AGACATTTTT----------TTAAT--TACATTCT-TTG--TAA--------------------TTTTTAACAA-----------TACATTTC---TT-----ATTTTTTTCAGACTGAACGCGCCAAAACCGCGGGATCTGGCTGGTTTGATTTGTCCGCAAC
droKik1 scf7180000301747:9554-9837 + GTAAAATCTA-AGACAGACTCCTTAAACTCGGGCTTACAAAACTT-----TTACATACATATGTATATAATGAAACCAT--------------A--AAGCTAAAGTCGA----CAA----GAGC-AGGAGGT--------GCTTAGGCCTAAGCTGCA---TGTTTTATTTGATGACGTCTTTAGTAATCTGATAGTATGATGTTGC------CCTTTAGTTAAGAAATCTTGTTT-GT--AACTTAGA------CA--ATT--------------------T-----------TTATATTTTGAAACTTT---TT-----AAATTTTTCAGTTGGAACGCAAAAAAAACATGGGTTCAGGTTGGTTTAATCTGCCGGCCAC
droAna3 scaffold_13258:497102-497341 + ATAAAATTC--AAACAGGTAGTTTAGGCA-TGGCATACAATGT-------CTA-----------------------GTTAATAGACTACAGTG------------AGGG----CTT--------TAAGAGCA--------GATGAGACTTGACA---T---AGCCGC-ATTGACGACGTCTTTAGTAACCTGATACCTTGTTAA-----AT-------TGTCAA---TACATATTTAAT------------------TAT--ATA---------------------------A-TTTTTAATGTACTCATA--TTTA-----TCAATTTTAGGTAAAACGTACAAAGAGCATGGGAAGTAGTTGGTTTGATCTGCCAGCTAC
droBip1 scf7180000394860:27853-28088 + GTAAATG-TT-AAACAGGTTGTTTAGGCT-TGGCATACAACGT-------CTA-----------------------GTTAA---------------------TAGACCA----CTA--------CATGAGCA--------GCTGAGGTTTGACA---C---AGCCGC-ATTGACGACGTCTTTAGTAATCTGATATCTAGTTAA-----ATTCAC---TGC----------ACATCTAT--ATCA--T---------TATTT--------------------CA--------T-TTTTACAGTAAACCATTTTTTT-----TTTAATTTTAGGTAATTCGAACGAAGTCCAAGGGAAGTGGTTGGTTTGATCTTCCCGCAAC
dp5 4_group4:6474084-6474337 - dps_1702 GTCAAGTTCA-AGGCAGACAGTTTAGAGCTGGGCTAATATTCTTT-----CCA---T---------ATAATGAAACGCTAA------------A--AAGTTATTGTCGA----CCC----ACAC-AGCAGTT--------GCTAAGGCTTGAGCTAGA---AGCCAC-ATTGACGACGTCTTTAGTAATCTGATAGACCAGT----------------AGTTCAAATA----------TGAAG--TACGTATA-GCA--TAT--------------------CATATACTAA-----------AAAAC------TC-------ATTTTTTAGGCGGAACGTGCAAAAACTAAAGGCAGCGGATGGTTCGATCTGCCAGCCAC
droPer2 scaffold_16:385815-386068 + dpe_842 GTCAAGTTCA-AGGCAGACAGTTTAGAGCTGGGCTAATATTCTTT-----CCA---T---------ATAATGAAACGCTAA------------A--AAGTTATTGTCGA----CCC----ACAC-AGCAGTT--------GCTAAGGCTTGAGCTAGA---AGCCAC-ATTGACGACGTCTTTAGTAATCTGATAGACCAGT----------------AGTTCAAATA----------TGAAG--TACGTATA-GTA--TAT--------------------CATATACTAA-----------AAAAC------TC-------ATTTTTTAGGCGGAACGTGCAAAAACTAAAGGCAGCGGATGGTTCGATCTGCCAGCCAC
droWil2 scf2_1100000004516:3741354-3741634 - dwi_1185 TTCAAGTTTTTCAGTAAATAATTTAGGCCACGGCTGACAAATCTTAATCTCCC---T---------CTATTGA----------------AACAT--AAGTTATAGTCCA----CCCA-ATACAC-AGCAATT--------GCCGAGGCCTGACTAAGTTTAGGGCAA-TTTGACGACGTCTTTAGTAATCTGATTTCAAGTAAA--------------AAAAAA---TTTAATTAGTAA--AAA-------------AAA--ATT-----ATCCCAATTGTT----------T-ATTGATTGTTTATTATA--TTTT----TATACTTTCAGATTGAACGTGCCAAGACAAAAGGCAGCGGTTGGTTCGATTTGCCTGCCAC
droVir3 scaffold_12963:2429815-2430075 + dvi_10170 ATTAAGTC-A-AGACAAATGATTTAGGCTTGGGCGTACAATCTTT----ATTT---T---------TTATTGA----------------AACA---GTGCTATTGTCGC----CCAAAACACAC-AGCAGTA--------GCTGAGGCA-GGTTTTGT---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCTCATCCATGCCAAA-------TATTTGTATT----------TAAAA--TACG---A-GCT--T-----------------------------------TCCATGTATAAACAAA--TTTG----TATACGTACAGGCCGAGCGAGCAAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCGGCTAC
droMoj3 scaffold_6500:12588458-12588720 + dmo_1529 ATCGAGTC-A-AGGCAGATGATTTAGGCGTGGGCGCACAATTTTA----ACTA---A---------TCAATGA----------------AACAT-AGTGCTATTGTCGC----CCCA-AAACAC-AGCAGTG--------GCCAAGGCA-GACGTTGT---TGCCAC-ATTGATGACGTCTTTAGTAATCTGAGTGCTGCTGCT----------C-CTAGTAAA---TGAATGCACCAA--ATTA--TG-------A--TTT--------------------CGTC-------------TACAGAAACGTA--CTTG---GTTTAATTACAGGCGGAACGTGCTAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCGGCAAC
droGri2 scaffold_15126:2582327-2582590 - CTCAAGCTAA-AGCCAAATAATTTAGGCGTGGGCTCACAATTATC-----TTATT-T---------TAAATGAAACGCT-------------AG--GTGCTATTGTCGC----CCCA--TGCAC-AGTAGTT--------ATCGAGGCAGGTGTT-GT---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCTCAACTATGCTAAT-------TATCTT---T------------------ATATATATGTA--TATC-------------------CAAATATAAA----------AGAATCTTA---TT-----ATTAATTACAGTCTGAACGCAGCAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCAGCAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CTTAAGTTCT-AGACAGGTAGTTTAGTCTCTGTCTTACAGAACAC-----CCAAA-T---------GAAATGA----------------AACAC--GCGCTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCTAAGCTATA---TGCCGT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------AGAGAA---TTCCAGCTCTAT--AACT-----------------------------------TG----------C-TTTCATTTCTAATCGCC--TTCC-----TTTTTTTCAGGCTGAACGCTCCAAGACCAAGGGCAAGGGATGGTTTAATATGCCCGCCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................CGA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................1919.0090090
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2516.0060411
...........................................................................................CAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2515.0050050
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2314.0040202
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2213.0030111
..........................................................................................................CGA----CC---------CAGGAGCC--------ACTTA.............................................................................................................................................................................................................................................1812.0020020
............................................................................................AC--GCGCTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2211.0010100
.............................................................................................................................................................A---TGCCGT-GGTGACGACGTC..........................................................................................................................................................................................................1911.0010010
....................................................................................................TATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2611.0010100
...........................................................................................CAC--GCGCTATTGTCGA----CC---------C.................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................T-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2811.0010100
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGCGC.........................................................................................................................................................................................2711.0010010
.........................................................................................................................................................CTATA---TGCCGT-GGTGACGACGT...........................................................................................................................................................................................................2211.0011000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGC...........................................................................................................................................................................................1811.0010010
.....................................................................................................ATTGTCGA----CC---------CAGGAGCC--------ACTTA.............................................................................................................................................................................................................................................2311.0010100
........................................................................................................GTCGA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................2111.0010010
..............................................................................................................................GGAGCC--------ACTTAGGTCTAGC.....................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................CGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2011.0010010
.....................................................AA-T---------GAAATGA----------------AACAC--GCGCTAA.......................................................................................................................................................................................................................................................................................2211.0011000
.....................................................................................................................................................................................................................................................................................................................................................TCCAAGACCAAGGGCAAGGGA....................2111.0010010
.........................................................................................AACAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2711.0010010
.....................................................................................................ATTGTCGA----CC---------CAGGAGCC--------AC................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................CGA----CC---------CAGGAGCC--------ACTTAGGTCTAAG.....................................................................................................................................................................................................................................2611.0010010
..........................................................................................................CGA----CC---------CAGGAGCC--------ACTTAGGT..........................................................................................................................................................................................................................................2111.0010010
.....................................................AA-T---------GAAATGA----------------AACAC--GCGCTATTGTCG..................................................................................................................................................................................................................................................................................2711.0011000
.....................................................................ATGA----------------AACAC--GCGCTATTGT....................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................CGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................1911.0010001
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2411.0010100
..................................................................................................................................................................................................................................................................................................................................................................GCAAGGGATGGTTTAATATG........2011.0010010
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2111.0010010
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2411.0010010
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2711.0010010
................................TCTTACAGAACAC-----CCAAA-T---------GAAATGA----------------A....................................................................................................................................................................................................................................................................................................2711.0010100
...................................................................................................................................................................CCGT-GGTGACGACGTCTTTAGTAA..................................................................................................................................................................................................2411.0011000
.....................................................AA-T---------GAAATGA----------------AACAC--GCGCTATTG.....................................................................................................................................................................................................................................................................................2411.0010010
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................................................................CCGT-GGTGACGACGTCTTTAGTAATCTG..............................................................................................................................................................................................2811.0010100
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2611.0010010
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2011.0010001
......................TTAGTCTCTGTCTTACAGAA....................................................................................................................................................................................................................................................................................................................................................2011.0010001
droSim2
CTTAAGTCCT-AGACAGATAGTTTAGTCTCTGGCTTACAGAACAC-----CCAAA-A---------GAAATGA----------------AACAC--GCGCTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCTAAGCTATA---TGCCGT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------AGAAAA---TTCCAGCTTTAT--AACT-----------------------------------TG----------C-TTTCATTTCTAATCGCC--TTCT-----TTTTTTTCAGGCTGAACGCTCCAAGACCAAGGGCAAGGGATGGTTTAATATGCCCGCCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................GTCTTTAGTAATCTGAGC...........................................................................................................................................................................................181176.0017626955410000000000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................21177.007719421330000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................22172.00724125510000000000000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................20168.00684421300000000000000
................................................................................................................................................................................CGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................19148.00483511110000000000000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................24137.00372017000000000000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................25127.0027212210000100000000
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................23126.0026232100000000000000
................GATAGTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................22119.001993700000000000000
...............AGATAGTTTAGTCTCTGGCTT..........................................................................................................................................................................................................................................................................................................................................................21117.0017141000001000100000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................21116.001642800000002000000
.......................TAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................20111.001182100000000000000
........................................................................................................................................................................GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................27111.001146100000000000000
......................TTAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2119.00970200000000000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2218.00814300000000000000
..................................................................................................................................................GTCTAAGCTATA---TGCCGT-GGTGACGAC.............................................................................................................................................................................................................2718.00804130000000000000
................GATAGTTTAGTCTCTGGCTT..........................................................................................................................................................................................................................................................................................................................................................2017.00750000001001000000
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2617.00750110000000000000
...................................................................................................................................................................................CTTTAGTAATCTGAGCGCA........................................................................................................................................................................................1915.00510400000000000000
....................................................................................................................................................................CGT-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................3015.00500000041000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2315.00540000010000000000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------CAGG..............................................................................................................................................................................................................................................................2214.00400400000000000000
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2614.00401210000000000000
.....................................................................................................................................................................GT-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2913.00310020000000000000
...................................................................................................................................................................CCGT-GGTGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................3213.00300000021000000000
................................................................................................................................................................................CGTCTTTAGTAATCTGAG............................................................................................................................................................................................1813.00330000000000000000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2513.00303000000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAG............................................................................................................................................................................................2113.00320000010000000000
...............AGATAGTTTAGTCTCTGGCTTA.........................................................................................................................................................................................................................................................................................................................................................2213.00300000002010000000
................GATAGTTTAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2713.00320100000000000000
...................................................................................................................................................................CCGT-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................3113.00300000030000000000
.................ATAGTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................2113.00321000000000000000
................................................................................................................................................................................CGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2013.00310200000000000000
....................GTTTAGTCTCTGGCTTACAGAA....................................................................................................................................................................................................................................................................................................................................................2213.00301110000000000000
..................................................................................................................................................................................TCTTTAGTAATCTGAGCG..........................................................................................................................................................................................1813.00310010000001000000
...............AGATAGTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................2313.00301200000000000000
..........................................................................................................CGA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................1912.00200000000000200000
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2412.00211000000000000000
...................................................................................................................................................................................CTTTAGTAATCTGAGCGC.........................................................................................................................................................................................1812.00200200000000000000
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2712.00211000000000000000
...................................TACAGAACAC-----CCAAA-A---------GAAAT.......................................................................................................................................................................................................................................................................................................................2112.00200010000000100000
................GATAGTTTAGTCTCTGGCTTA.........................................................................................................................................................................................................................................................................................................................................................2112.00211000000000000000
...............AGATAGTTTAGTCTCTGGCT...........................................................................................................................................................................................................................................................................................................................................................2012.00211000000000000000
......................................................................................................................................................................T-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2812.00200200000000000000
...............AGATAGTTTAGTCTCTGGCTTT.........................................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
............GACAGATAGTTTAGTCTCTGGCT...........................................................................................................................................................................................................................................................................................................................................................2312.00201100000000000000
..................TAGTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
....................................................................................................................................................................CGT-GGTGACGACGTCTTTA......................................................................................................................................................................................................1912.00200000000000200000
.........................................................................................AACAC--GCGCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2712.00202000000000000000
.................ATAGTTTAGTCTCTGGCTTACAGAA....................................................................................................................................................................................................................................................................................................................................................2512.00200020000000000000
................GATAGTTTAGTCTCTGGCTTACAGAA....................................................................................................................................................................................................................................................................................................................................................2612.00200020000000000000
..................TAGTTTAGTCTCTGGCTTACAGA.....................................................................................................................................................................................................................................................................................................................................................2312.00200000002000000000
........................................................................................................GTCGA----CC---------CAGGAGCC--------ACTTA.............................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------..................................................................................................................................................................................................................................................................1811.00110000000000000000
...............AGATAGTTTAGTCTCTGGCTTTT........................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..................TAGTTTAGTCTCTGGCTTACAG......................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------C.................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................................................................................................................TGCCGT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2411.00100010000000000000
...............................GGCTTACAGAACAC-----CCAAA-A---------GAAATGA----------------.....................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..................TAGTTTAGTCTCTGGCTTACA.......................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.......................TAGTCTCTGGCTTACAGAA....................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
....................................................................................................TATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................1811.00101000000000000000
...........................................................................................................GA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................1811.00100010000000000000
....................................................................................................................................................................CGT-GGTGACGACGTCTTTAGTAATCTGAG............................................................................................................................................................................................2911.00100000010000000000
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------..................................................................................................................................................................................................................................................................1911.00101000000000000000
................................GCTTACAGAACAC-----CCAAA-A---------GAA.........................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
............GACAGATAGTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................2611.00100000100000000000
.........................................................................................AACAC--GCGCTATTGTCGA----CC---------CAGG..............................................................................................................................................................................................................................................................2411.00101000000000000000
..................................................................................................GCTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2011.00110000000000000000
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------CAGGAG............................................................................................................................................................................................................................................................2511.00101000000000000000
............................................................................................AC--GCGCTATTGTCGA----CC---------CAG...............................................................................................................................................................................................................................................................2011.00110000000000000000
................................GCTTACAGAACAC-----CCAAA-A---------GAAATGA----------------A....................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------CAGGAGCC--------..................................................................................................................................................................................................................................................2611.00101000000000000000
.................ATAGTTTAGTCTCTGGCTTACA.......................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................2611.00100100000000000000
............................................................................................................................CAGGAGCC--------ACTTAGGTCTAAGC....................................................................................................................................................................................................................................2211.00100000000000100000
...........................................................................................CAC--GCGCTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2311.00100010000000000000
....................................................................................................................................................................CGT-GGTGACGACGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................3111.00100000010000000000
..........................................................................................ACAC--GCGCTATTGTCGA----CC---------CAGGAGG...........................................................................................................................................................................................................................................................2611.00101000000000000000
..................TAGTTTAGTCTCTGGCTTA.........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.............ACAGATAGTTTAGTCTCTG..............................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
................................................................................................................................................AGGTCTAAGCTATA---TGCCGT-GGTGACGAC.............................................................................................................................................................................................................2911.00100010000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2211.00100100000000000000
..............................................................................................................................GGAGCC--------ACTTAGGTCTAAGCT...................................................................................................................................................................................................................................2111.00110000000000000000
....................................................................................................................................................CTAAGCTATA---TGCCGT-GGTGACGAC.............................................................................................................................................................................................................2511.00100010000000000000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGCGC.........................................................................................................................................................................................2611.00101000000000000000
.....................TTTAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
.......................TAGTCTCTGGCTTACAGAACAC-----C...........................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
........................................AACAC-----CCAAA-A---------GAAATGA----------------AACA.................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....................GTTTAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGCGA.........................................................................................................................................................................................2011.00100100000000000000
.................ATAGTTTAGTCTCTGGCTTACAGAACAC-----C...........................................................................................................................................................................................................................................................................................................................................2911.00100100000000000000
..........................................................................................................................................................TATA---TGCCGT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2811.00100010000000000000
.......................................................................GA----------------AACAC--GCGCTATTGTCGA----C............................................................................................................................................................................................................................................................................2111.00101000000000000000
......................................................A-A---------GAAATGA----------------AACAC--GCGCT.........................................................................................................................................................................................................................................................................................1911.00100000000000100000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2111.00101000000000000000
....................................................................................................TATTGTCGA----CC---------CAGGAGCC--------..................................................................................................................................................................................................................................................1911.00100100000000000000
....................................................................................................................................................................................TTTAGTAATCTGAGCGCAAC......................................................................................................................................................................................2011.00110000000000000000
.....................TTTAGTCTCTGGCTTACA.......................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..................................................................................................................................................GTCTAAGCTATA---TGCCGT-GGTG..................................................................................................................................................................................................................2211.00100010000000000000
...................................................................................................................................C--------ACTTAGGTCTAAGCTATA---TGCCGT-GGT...................................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................TATA---TGCCGT-GGTGACGAC.............................................................................................................................................................................................................1911.00101000000000000000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGA.............................................................................................................................................................................................1811.00100100000000000000
.............................................................................................C--GCGCTATTGTCGA----CC---------CAGGAGCC--------..................................................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................GCTATTGTCGA----CC---------CAGGAGCC--------ACTT..............................................................................................................................................................................................................................................2511.00100010000000000000
..................TAGTTTAGTCTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.................ATAGTTTAGTCTCTGGCTTAA........................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
........................................................A---------GAAATGA----------------AACAC--GCGCT.........................................................................................................................................................................................................................................................................................1811.00100010000000000000
..................................................................................................................................................GTCTAAGCTATA---TGCCGT-GAC...................................................................................................................................................................................................................2111.00100100000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGA.............................................................................................................................................................................................2011.00110000000000000000
................GATAGTTTAGTCTCTGGCT...........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAG............................................................................................................................................................................................1911.00101000000000000000
....................GTTTAGTCTCTGGCTTA.........................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..................................................................GAAATGA----------------AACAC--GCGCTATTGTCGA----.............................................................................................................................................................................................................................................................................2511.00110000000000000000
................GATAGTTTAGTCTCTGGC............................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...........................................................................................................................................................ATA---TGCCGT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2711.00100010000000000000
....................GTTTAGTCTCTGGCTTACAGAACAC-----CC..........................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................GTTTAGTCTCTGGCTTAC........................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAG............................................................................................................................................................................................2311.00110000000000000000
...............................GGCTTACAGAACAC-----CCAAA-......................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
dm3
ATTGAGTCCT-AGACAGATAGTTTAGTCTCTGGTTTACAGAACAC-----CCAAATG---------GAAATGA----------------AACAC--GCGCTTTTGTCGA----CC---------CAGGAGCC--------AGTTAGGTCTAAGCTGTT---TGTCAT-GGTGACGACGTCTTTAGTAATCTGAGCGCAACATAT--------------TGGAAA---TTTCAGACC-CT--ACCT-----------------------------------TG----------C-TTTTATTTTTAATCGCC--TTCC------TTTTTTCAGGCTGAACGCTCAAAGACCAAGGGCAAGGGATGGTTTAATCTGCCCGCCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................22145.00450000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205000000000000000010002000000000000000100000000000000000000000100000000000000000002100411000000000000000001000000000000110000000000000000000000001110000001000010010001002000001010210001300200
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................23144.00440000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000003000203000000000000000000000000000000100000000000000000000100001011200300000000000301002100000001801121000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................25139.00390000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000100003000000000000002000111000000000000000000000000000000000000000000000000001000001101000010000000000001000010011000720023000100
................................................................................................................................................................................CGTCTTTAGTAATCTGAGCG..........................................................................................................................................................................................20137.00370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120001000000000000000000000000000000000000000000000010000001002615900200200000000000000001000000000000000000000000000000000000000000000000000000001001000000000000000001000000000000000000000000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................20136.00360000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000206000000000000000000000000000000000000000000000000000100000001000510000000000110001100004000100000000000000000000000000000100000000110000000010000000000000001010000000000000000001000100100000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................24133.00330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000010000000000000050000000000000010000000000100000000020000000000000000001000100000000000000000000000100000000010000000001000000000010000010100100121010100001000000010001200000001000
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................26126.00260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000200000000000000000100100000001000200000000000000000000000010000000000000000000010000000020000000010110000000000000000000000000600211000000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................30125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000001000010510010000000000000000000000000012100000000040100001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
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............................................................................................................................................AGTTAGGTCTAAGCTGTT---.............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................AC--GCGCTTTTGTCGA----CC---------CAGGAGCC--------..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................A----CC---------CAGGAGCC--------AGTTAGGT..........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GTCTAAGCTGTT---TGTCAT-GGTGAC................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GTCTAAGCTGTT---TGTCAT-GGTGACG...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CC---------CAGGAGCC--------AGTTAGGTCTA.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................CAGAACAC-----CCAAATG---------GAAATGA----------------.....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGCGCAAC......................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T---TGTCAT-GGTGACGACGTC..........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTAATCTGAGCGCAACATAT--------------T...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................TG---------GAAATGA----------------AACAC--GCGCTTTTGT....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AATG---------GAAATGA----------------AACAC--GCGCTTTTGTCG..................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
........................................................................................................................................................................................GTAATCTGAGCGCAACATC...................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCTTTAGTAATCTGAGCGCT........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TGTCGA----CC---------CAGGAGCC--------AGTTAGGTCT........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TAATCTGAGCGCAACATAT--------------TGGAAA---...........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................TCGA----CC---------CAGGAGCC--------AGTTA.............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CT-AGACAGATAGTTTAGTCTCTGGTTT..........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ATG---------GAAATGA----------------AACAC--GCGCTTT.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GGAGCC--------AGTTAGGTCTAAGCTGTT---T............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GTCAT-GGTGACGACGTCTT........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GTT---TGTCAT-GGTGACGACGT...........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................A----CC---------CAGGAGCC--------AGTTAGGTCTA.......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
CTTAAGTCCT-AGACAGATAGTTTAGTTTCTGGCTTACAGAACAC-----CCAACTA---------GAAATGA----------------AACAC--GCACTATTGTCGA----CC---------CAGGAGCC--------ACTTAGGTCCAAGCTATT---TGCCAT-GGTGACGACGTCTTTAGTAATCTGAATGCAACATATGTA------TCTGCAGTAAT---TTCCTGCTT-AC--AACT-----------------------------------TG----------C-TGTTATTTCTAATCGCC--TTC-------TTTTTTCAGGCTGAACGCTCCAAGACTAAGGGCAAAGGATGGTTTGATCTGCCCGCAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................26114.00141001570
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................3017.0070000007
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2116.0062001030
...........................................................................................CAC--GCACTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2516.0060100320
..........................................................................................ACAC--GCACTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2616.0062200020
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................3114.0040000004
........................................................................................................................................................................GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2713.0030000030
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2213.0030010020
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2313.0030000120
.................................................................................................................................................................................GTCTTTAGTAATCTGAAT...........................................................................................................................................................................................1812.0020000020
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCTGAATA..........................................................................................................................................................................................3212.0020000002
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2512.0020000020
.........................................................................................................................................................................................................................................................................................................................................................AGACTAAGGGCAAAGGATGGTT...............2212.0020000200
...................................................................................................CTATTGTCGA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................2612.0020000020
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2612.0020000002
.........................................................................................AACAC--GCACTATTGTCGA----CC---------CAGGAG............................................................................................................................................................................................................................................................2612.0020100100
.........................................................................................................................................................CTATT---TGCCAT-GGTGACGAC.............................................................................................................................................................................................................2012.0020101000
...................................................................................................CTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................1912.0020000110
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2812.0020001010
................................................................................................................................................................................CGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................1912.0020000002
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2412.0020000110
..................................................................................................................................................GTCCAAGCTATT---TGCCAT-GGTGAC................................................................................................................................................................................................................2411.0010100000
..........................................................................................ACAC--GCACTATTGTCGA----CC---------CAGG..............................................................................................................................................................................................................................................................2311.0011000000
........................................................................................................................................................................GGTGACGACGTCTTTAGT....................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGA.............................................................................................................................................................................................2811.0011000000
......................TTAGTTTCTGGCTTACAGAACAC-----C...........................................................................................................................................................................................................................................................................................................................................2411.0010100000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAATG..........................................................................................................................................................................................2611.0010000010
.................................................................................................................................................................TGCCAT-GGTGACGACGTCT.........................................................................................................................................................................................................1911.0010000010
............................................................................................AC--GCACTATTGTCGA----CC---------C.................................................................................................................................................................................................................................................................1811.0010100000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTA......................................................................................................................................................................................................1911.0010000010
...........................................................................................CAC--GCACTATTGTCGA----CC---------CAGG..............................................................................................................................................................................................................................................................2211.0011000000
................................................................................................GCACTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2011.0011000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTCT.........................................................................................................................................................................................................2311.0010001000
........................................................A---------GAAATGA----------------AACAC--GCACTATTGTCGA----C............................................................................................................................................................................................................................................................................2711.0010100000
.....................................................................ATGA----------------AACAC--GCACTATTGTCG..................................................................................................................................................................................................................................................................................2111.0011000000
...........................................................................................CAC--GCACTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2311.0010000100
...........................................................................................................................................................ATT---TGCCAT-GGTGACGAC.............................................................................................................................................................................................................1811.0011000000
............................................................................................AC--GCACTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2411.0010100000
..................................................................................................................................................................GCCAT-GGTGACGACGTCT.........................................................................................................................................................................................................1811.0011000000
........................................................A---------GAAATGA----------------AACAC--GCACTATTGTC...................................................................................................................................................................................................................................................................................2411.0010100000
............................................................................................AC--GCACTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2211.0010000100
........................AGTTTCTGGCTTACAGAACAC-----CCA.........................................................................................................................................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGAC.............................................................................................................................................................................................................1911.0010100000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAAT.................................................................................................................................................................................................2411.0010000100
...............................GGCTTACAGAACAC-----CCAA........................................................................................................................................................................................................................................................................................................................................1811.0011000000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCTGA.............................................................................................................................................................................................2911.0011000000
..................................................................................................................................................................................TCTTTAGTAATCTGAAT...........................................................................................................................................................................................1711.0010000001
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAAA.................................................................................................................................................................................................2411.0010000100
.................................................................................................................CC---------CAGGAGCC--------ACTTAGGTCCAAGC....................................................................................................................................................................................................................................2411.0010001000
...........................................................................................CAC--GCACTATTGTCGA----CC---------CAGGAG............................................................................................................................................................................................................................................................2411.0010000100
........................................................................................................................................................GCTATT---TGCCAT-GGTGACGACGTCT.........................................................................................................................................................................................................2511.0010000010
...........................................................................................................GA----CC---------CAGGAGCC--------ACTTAG............................................................................................................................................................................................................................................1811.0010000010
..........................................................................................ACAC--GCACTATTGTCGA----CC---------CAGGAG............................................................................................................................................................................................................................................................2511.0011000000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTT.......................................................................................................................................................................................................1911.0010000010
.................................................................................................CACTATTGTCGA----CC---------CAGGAGC...........................................................................................................................................................................................................................................................2111.0010000010
.....................................................................................................................................................................AT-GGTGACGACGTCTTTAG.....................................................................................................................................................................................................1911.0010000100
....................................................................................................................................................CCAAGCTATT---TGCCAT-GGTGACGAC.............................................................................................................................................................................................................2511.0010100000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2211.0010100000
..................................................................................................................................................GTCCAAGCTATT---TGCCAT-GGTGACGA..............................................................................................................................................................................................................2611.0010001000
....................................................................AATGA----------------AACAC--GCACTATTGTCG..................................................................................................................................................................................................................................................................................2211.0010000100
.................ATAGTTTAGTTTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2611.0010001000
....................................................................................................................................................................CAT-GGTGACGACGTCTTT.......................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................CCAT-GGTGACGACGTCTT........................................................................................................................................................................................................1811.0011000000
..................................................................................................................................................GTCCAAGCTATT---TGCCAT-G.....................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2011.0010000010
...............................GGCTTACAGAACAC-----CCAACTA---------GAA.........................................................................................................................................................................................................................................................................................................................2411.0010100000
..................................................................................................................................................................GCCAT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2311.0010000010
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAATG..........................................................................................................................................................................................2211.0010000100
..........................................................................................ACAC--GCACTATTGTCGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2411.0010100000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCT...............................................................................................................................................................................................2711.0010000010
................................................................................................GCACTATTGTCGA----CC---------CAGG..............................................................................................................................................................................................................................................................1911.0011000000
...........AGACAGATAGTTTAGTTTCT...............................................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
CTTAAGTCCT-AGACAGATAGTTTAGTTTCTGGCTTACAGAACAC-----CAAAATA---------AAAATGA----------------AACAC--GCACTTTTGTTGA----CC---------CAGGAGCT--------ACTTAGGGCTAAGCTATT---TGCCAT-GGTGACGACGTCTTTAGTAATCTGAATGCAACCTAT----------ATGTAGTAAT---TTTCTGCTTTAC--GGCC-----------------------------------TG----------CCTCTTATTTATATTCGCT--TTCCTTTCTATCCTTTCAGATTGAACGCTCTAAGACCAAGGGCAAAGGATGGTTTAACCTCCCCGCAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................21142.0042010000000041
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................25119.0019000000000019
.................................................................................................................................................................................GTCTTTAGTAATCTGAAT...........................................................................................................................................................................................18117.0017000000000017
..................................................................................................................................................................................TCTTTAGTAATCTGAAT...........................................................................................................................................................................................17112.0012000000000012
...........................................................................................................GA----CC---------CAGGAGCT--------ACTTAGGGCTAAGC....................................................................................................................................................................................................................................26110.001001000090000
................................................................................................................................................................................CGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................1916.00600000000006
....................................................................................................................................................................................TTTAGTAATCTGAAT...........................................................................................................................................................................................1514.00400000000004
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2614.00400000040000
..................................................................................................................................................................GCCAT-GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................3213.00300000000003
...........................................................................................CAC--GCACTTTTGTTGA----CC---------CAGG..............................................................................................................................................................................................................................................................2213.00301100010000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATC................................................................................................................................................................................................2513.00330000000000
............................................................................................................................CAGGAGCT--------ACTTAGGGCTAAGC....................................................................................................................................................................................................................................2213.00300000030000
..................................................................................................................C---------CAGGAGCT--------ACTTAGGGCTAAGC....................................................................................................................................................................................................................................2312.00200000020000
...........................................................................................................GA----CC---------CAGGAGCT--------ACTTAGGGCTAAGCT...................................................................................................................................................................................................................................2712.00200000020000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGA.............................................................................................................................................................................................2812.00220000000000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCTGAATG..........................................................................................................................................................................................3212.00200000000002
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2112.00200000020000
.............................................................................................................................AGGAGCT--------ACTTAGGGCTAAGC....................................................................................................................................................................................................................................2112.00200000020000
...........................................................................................................GA----CC---------CAGGAGCT--------ACTTAGGG..........................................................................................................................................................................................................................................2012.00200000020000
.....................................................................................................................................................................AT-GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2912.00200000020000
............................................................................................AC--GCACTTTTGTTGA----CC---------CAGG..............................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................AGGAGCT--------ACTTAGGGCTAAG.....................................................................................................................................................................................................................................2011.00100000010000
........................................................A---------AAAATGA----------------AACAC--GCACTTTTGTTGA----CC---------..................................................................................................................................................................................................................................................................2811.00100100000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTCTTT.......................................................................................................................................................................................................2511.00100000010000
............................................................................................................................CAGGAGCT--------ACTTAGGGCTAAGCT...................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................3011.00100000010000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2011.00110000000000
................................GCTTACAGAACAC-----CAAAAT......................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTG..............................................................................................................................................................................................2711.00100000010000
........................................................................................................................................................................GGTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2711.00110000000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTC..........................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................GCCAT-GGTGACGACGTCTTTA......................................................................................................................................................................................................2111.00100000010000
.................ATAGTTTAGTTTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGT...........................................................................................................................................................................................................2111.00100010000000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTA...................................................................................................................................................................................................2311.00100000100000
.....................................................................................................................................................TAAGCTATT---TGCCAT-GGTGACGACGTCTT........................................................................................................................................................................................................2911.00100000010000
........................................................................................................................................................GCTATT---TGCCAT-GGTGACGACGTCT.........................................................................................................................................................................................................2511.00100000010000
..........................................................................................ACAC--GCACTTTTGTTGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2411.00100000010000
.........................................................................................AACAC--GCACTTTTGTTGA----CC---------CAG...............................................................................................................................................................................................................................................................2311.00100100000000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2811.00100000010000
..........................................................................................................................................................TATT---TGCCAT-GGTGACGACGTCTT........................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................GCCAT-GGTGACGACGTCTTTAGT....................................................................................................................................................................................................2311.00100000010000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2011.00100010000000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGAA............................................................................................................................................................................................2911.00110000000000
....................................................................AATGA----------------AACAC--GCACTTTTGTT...................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................CAAGGGCAAAGGATGGTTTAACCT.........2411.00100000010000
.........................................................................................................................................................................GTGACGACGTCTTTAGTAATCTGAATG..........................................................................................................................................................................................2711.00100000010000
......................................................................................................................................................................T-GGTGACGACGTCTTTAGTAATCTGAAT...........................................................................................................................................................................................2811.00100000010000
....................................................................................................................................................................CAT-GGTGACGACGTCTTTAGTAATCTGG.............................................................................................................................................................................................2811.00110000000000
................GATAGTTTAGTTTCTGGCTTACA.......................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................TAGTTTAGTTTCTGGCTTACAG......................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............GACAGATAGTTTAGTTTCTGGCT...........................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.............................................................................................................................AGGAGCT--------ACTTAGGGCTAAGCT...................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................ATT---TGCCAT-GGTGACGACGTCTTTAG.....................................................................................................................................................................................................2611.00100000010000
...........................................................................................CAC--GCACTTTTGTTGA----CC---------CAGGA.............................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................GCCAT-GGTGACGACGTCTTTAGTAATCT...............................................................................................................................................................................................2811.00100000010000
............................................................................................AC--GCACTTTTGTTGA----CC---------CA................................................................................................................................................................................................................................................................1911.00101000000000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTAGTAATCTG..............................................................................................................................................................................................2811.00100000010000
.......................................................................GA----------------AACAC--GCACTTTTGTTGA----CC---------..................................................................................................................................................................................................................................................................2211.00100100000000
................GATAGTTTAGTTTCTGGCTTACAGAAC...................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
......................................................................................................TTGTTGA----CC---------CAGGAGCT--------ACTTA.............................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................TTGA----CC---------CAGGAGCT--------ACTTAG............................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................CCAT-GGTGACGACGTCTTTA......................................................................................................................................................................................................2011.00100000010000
................GATAGTTTAGTTTCTGGCTTA.........................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
droEug1
GAGAATGCCA-AGTCAGATAACTAAGTAACTAGCCTACACAATAT-----CATCTTA---------AATGTTA----------------TGAAA--GAACTGTGGTCTA-------------------AATT--------AATTATGTCTGAGAAAGT---TGCCAT-ATTGACGACGACTTTAGTAATCTGAAAACAAGAT----------------GGGCAA---CTTCAGCATTTA------------------TAC--TTT---------------------------A-TTCCTTTCTTAATCGTC--TT--------AATTTTTAGGCTAAAAGCTCCAAAACTAAGGGAGGAGATTGGGCTTACTTTCCTGCCTCSizeHit CountTotal NormTotal
No Reads
droBia1
GTTAAGCCCC-AGACTGACAACTTAGGCCATGGCTTACAGAACAC-----AAACCTC---------AAAATGA----------------AGCAC--AGTGGATTGTCGA----CG---------CAGGATCC--------ACTTAGGTCTGGG----T---TGCC---ATTGACGACGTCTTTAGTAATCTGACAGCATGAC-----------------GGCAA---CTCCAGCTGACG------------------TTT--TTA---------------------------A-GTCCTTTTCTAATCCTA---TC-----TTATATCTCAGGCTGAACGCGCCAAATCCAAGGGCAAGGGCTGGTATGATTTGCCCGCGACSizeHit CountTotal NormTotal
No Reads
droTak1
GTGAAGTCAA-AAACTGGTAATTTAGGCTATGGCTTACAAAACAT-----TACCATC---------AAAATGA----------------AGCAA-----ATATTGTCGA----CC---------CAGGAGAC--------ACTTAGGTCTGAGCTAGT---TGCCCC-ATTGACGACGTCTTTAGTAATCTGAGAAAAATAT----------------AGATAT---AACCAGCTATTG------------------TAT--TTA----------------A----------T-TTCCTTTTCTAATCGCC--TTTC-----TGTTTTTCAGGTTGAACGCGCTCGAACCAAAGGAAAAGGTTGGTTTGATTTGCCCGCCACSizeHit CountTotal NormTotal
No Reads
droEle1
GCTAAGTCCA-AGACAGATAAATTTTGCTCTGGCATACAGATAAT-----TTACCAA-----------AA-TA----------------AGCTA--AGACTATTGTCAAAACGCC---------AAGGAGCT--------GCTTAGGCCTGAGCTATT---TGCCAA-ATTGACGACGTCTTTAGTAATCTGAGAACAGGAC----------------CGTCAT---TTTCAGCTCACT------------------TGT--TCTATTTC------------CG--------------GATTCTAATCCTG--TTT-------GTTTTTCAGACTGAACGCGCAAAAACCAAGGGGAGCGGATGGTTTCATTTGCCCGCCACSizeHit CountTotal NormTotal
No Reads
droRho1
GTTAAGTCCA-AGACAGATAATTTTGGCTCTGGCTTACAGATCTTA---ATCAAA-A---------GCAAAGA----------------AACAATAGT----ATGTCGGTACACC---------TAG-------------GCCTAGGCCTGAGCTAGT---TGCCGT-ATTGACGACGTCTTTAGTAATCTGAAAGCAGAAA----------------ACCCAT---CCCCAGCTGACA------------------GAT--TCT----------------A----------T-TTTCTTTTCTAATCGTC--TTC-------ATTTTTCAGGCTGAACGCGGTAAAACCAAGGGGAGCGGCTGGTTTAATTTGCCCGCCACSizeHit CountTotal NormTotal
No Reads
droFic1
GTAAATATCA-AGAAAGATAATTAAGGCCATGGCTTACAGACCAA-----CAA---C---------AAAATGA----------------AACAG--CGACTGTTATCCGTCCACTT----ACCC-CAGAGCTATGTGTATATTTACTTCTGAATCAGG---TGCCAC-ATTGACGACTTCTTTAGTAATCTGAAAGAATTTC----------------AGACATTTTT----------TTAAT--TACATTCT-TTG--TAA--------------------TTTTTAACAA-----------TACATTTC---TT-----ATTTTTTTCAGACTGAACGCGCCAAAACCGCGGGATCTGGCTGGTTTGATTTGTCCGCAACSizeHit CountTotal NormTotal
No Reads
droKik1
GTAAAATCTA-AGACAGACTCCTTAAACTCGGGCTTACAAAACTT-----TTACATACATATGTATATAATGAAACCAT--------------A--AAGCTAAAGTCGA----CAA----GAGC-AGGAGGT--------GCTTAGGCCTAAGCTGCA---TGTTTTATTTGATGACGTCTTTAGTAATCTGATAGTATGATGTTGC------CCTTTAGTTAAGAAATCTTGTTT-GT--AACTTAGA------CA--ATT--------------------T-----------TTATATTTTGAAACTTT---TT-----AAATTTTTCAGTTGGAACGCAAAAAAAACATGGGTTCAGGTTGGTTTAATCTGCCGGCCACSizeHit CountTotal NormTotal
No Reads
droAna3
ATAAAATTC--AAACAGGTAGTTTAGGCA-TGGCATACAATGT-------CTA-----------------------GTTAATAGACTACAGTG------------AGGG----CTT--------TAAGAGCA--------GATGAGACTTGACA---T---AGCCGC-ATTGACGACGTCTTTAGTAACCTGATACCTTGTTAA-----AT-------TGTCAA---TACATATTTAAT------------------TAT--ATA---------------------------A-TTTTTAATGTACTCATA--TTTA-----TCAATTTTAGGTAAAACGTACAAAGAGCATGGGAAGTAGTTGGTTTGATCTGCCAGCTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................GACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................24126.00262010221
........................................................................................................................................................................ATTGACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................27126.00265100614
............................................................................................................................................................................ACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................23121.00211000119
..............................................................................................................................................................................GACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................21121.00211200117
..........................................................................................................................................................................TGACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................25116.00162000014
................................................................................................................................................................................CGTCTTTAGTAACCTGATA...........................................................................................................................................................................................19114.00141000112
.............................................................................................................................................................................CGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................22112.00120000111
...............................................................................................................................................................................ACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................20111.00110100010
.........................................................................................................................................................................TTGACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................26110.0010110008
.................................................................................................................................................................................GTCTTTAGTAACCTGATA...........................................................................................................................................................................................1817.007000007
......................................................................................................................................................................C-ATTGACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................2815.005100004
...................AGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2213.003110001
.................GTAGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2413.003210000
.....................................................................................CTACAGTG------------AGGG----CTT--------TAAGAGCA--------..................................................................................................................................................................................................................................................2313.003000003
...................................................................................GACTACAGTG------------AGGG----CTT--------TAAGAGC...........................................................................................................................................................................................................................................................2413.003020010
..................TAGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2313.003000003
.................................................................................................................................................GACTTGACA---T---AGCCGC-ATTGACGACGT...........................................................................................................................................................................................................2713.003020010
....................GTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2112.002010001
.................................................................................................................................................GACTTGACA---T---AGCCGC-ATTGACGAC.............................................................................................................................................................................................................2512.002020000
............................................................................................................G----CTT--------TAAGAGCA--------GATGAGACTTGACA---T---.............................................................................................................................................................................................................................2712.002000002
................................................................................ATAGACTACAGTG------------AGGG----CTT--------TAAGAGC...........................................................................................................................................................................................................................................................2712.002000011
.......................TAGGCA-TGGCATACAATGT-------............................................................................................................................................................................................................................................................................................................................................1912.002000002
.........................................................................................AGTG------------AGGG----CTT--------TAAGAGCA--------..................................................................................................................................................................................................................................................1912.002000002
............................................................................GTTAATAGACTACAGTG------------AGG..................................................................................................................................................................................................................................................................................2012.002020000
...................AGTTTAGGCA-TGGCATACAATGT-------............................................................................................................................................................................................................................................................................................................................................2312.002000002
..................................................................................AGACTACAGTG------------AGGG----CTT--------TAAGAGC...........................................................................................................................................................................................................................................................2512.002010010
...............AGGTAGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2612.002000002
............................................................................GTTAATAGACTACAGTG------------AGGG----CT...........................................................................................................................................................................................................................................................................2312.002100010
................GGTAGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2512.002000002
.................................................................................................................................................GACTTGACA---T---AGCCGC-ATT...................................................................................................................................................................................................................1912.002011000
...........AAACAGGTAGTTTAGGCA-T...............................................................................................................................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................ATTGACGACGTCTTTAGTAACCTGA.............................................................................................................................................................................................2511.001010000
...................................................................................................................T--------TAAGAGCA--------GATGAGACTTGACA---T---.............................................................................................................................................................................................................................2411.001001000
...................................................................................................................................A--------GATGAGACTTGACA---T---AGC..........................................................................................................................................................................................................................1911.001010000
.....................TTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................GTAACCTGATACCTTGTTAA-----AT-------TGT.................................................................................................................................................................2511.001100000
.........................................................................................................................................................A---T---AGCCGC-ATTGACGACGTCTTTAGT....................................................................................................................................................................................................2611.001010000
.............ACAGGTAGTTTAGGCA-TGGC............................................................................................................................................................................................................................................................................................................................................................2011.001001000
....................................................................................................................................................................CGC-ATTGACGACGTCTTTAGC....................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................GC-ATTGACGACGTCTTTAGTAACCTGATA...........................................................................................................................................................................................2911.001010000
...................................................................................GACTACAGTG------------AGGG----CTT--------TAAGAGCA--------..................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................TAACCTGATACCTTGTTAA-----AT-------TG..................................................................................................................................................................2311.001100000
............................................................................................................G----CTT--------TAAGAGCA--------GATGAGACTTGAC.....................................................................................................................................................................................................................................2511.001000001
.......................................................................................................................................................................................AGTAACCTGATACCTTGTTA...................................................................................................................................................................................2011.001010000
.....ATTC--AAACAGGTAGTTTAGGCA-................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................AAACGTACAAAGAGCATGGGAAGTA......................2511.001000010
.........................................................................................................................................................A---T---AGCCGC-ATTGACGACGTCTTTAGC....................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................A---T---AGCCGC-ATTGACGACGTCT.........................................................................................................................................................................................................2111.001100000
........C--AAACAGGTAGTTTAGGCA-TGGCATAC........................................................................................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................................................................GAGCA--------GATGAGACTTGACA---T---AGC..........................................................................................................................................................................................................................2311.001010000
..................................................CTA-----------------------GTTAATAGACTACAGTG------------AGGG----CTT--------..................................................................................................................................................................................................................................................................2711.001000001
.................................................................................................................................................................AGCCGC-ATTGACGACGTCTTTAGT....................................................................................................................................................................................................2411.001010000
...................................................................................................................T--------TAAGAGCA--------GATGAGACTTGACA---T---AGCC.........................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................AGCCGC-ATTGACGACGTCTTTAGTAAC.................................................................................................................................................................................................2711.001010000
.................GTAGTTTAGGCA-TGGCATACAATGT-------............................................................................................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................CGACGTCTTTAGTAACCTGATACC.........................................................................................................................................................................................2411.001010000
.........................................................................................................................................................A---T---AGCCGC-ATTGACGACGC...........................................................................................................................................................................................................1911.001010000
.................................................................................................................................................GACTTGACA---T---AGCCGC-ATTGAC................................................................................................................................................................................................................2211.001010000
..................................ATACAATGT-------CTA-----------------------GTTAAT............................................................................................................................................................................................................................................................................................................1811.001001000
..............................TGGCATACAATGT-------CTA-----------------------GTTAATAGA.........................................................................................................................................................................................................................................................................................................2511.001010000
............................................................................GTTAATAGACTACAGTG------------AGGG----C............................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................T--------TAAGAGCA--------GATGAGACTTGACA---T---AGC..........................................................................................................................................................................................................................2711.001000010
..................................................................................................................................................................GCCGC-ATTGACGACGTCT.........................................................................................................................................................................................................1811.001100000
..............CAGGTAGTTTAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................TTTAGGCA-TGGCATACAATGT-------............................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................AGACTACAGTG------------AGGG----CTT--------..................................................................................................................................................................................................................................................................1811.001001000
........................................................................................................................................................................................GTAACCTGATACCTTGTTAA-----AT-------T...................................................................................................................................................................2311.001100000
..................................................................................................................................................................GCCGC-ATTGACGACGTCTTTAGT....................................................................................................................................................................................................2311.001010000
......................................................................................TACAGTG------------AGGG----CTT--------TAAGAGCA--------GATGAA............................................................................................................................................................................................................................................2811.001100000
........................................TGT-------CTA-----------------------GTTAATAGACTACAGTG------------AGGG----C............................................................................................................................................................................................................................................................................2811.001010000
....................................................................................ACTACAGTG------------AGGG----CTT--------TAAGAGCA--------G.................................................................................................................................................................................................................................................2511.001000010
....................................................A-----------------------GTTAATAGACTACAGTG------------AGGG----CT...........................................................................................................................................................................................................................................................................2411.001000010
.................GTAGTTTAGGCA-TGGCATAC........................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................TAGGCA-TGGCATACAATG....................................................................................................................................................................................................................................................................................................................................................1811.001000001
.....................................................................................CTACAGTG------------AGGG----CTT--------TAA...............................................................................................................................................................................................................................................................1811.001000001
......................TTAGGCA-TGGCATACAATGT-------............................................................................................................................................................................................................................................................................................................................................2011.001000001
................................................................................................................................AGCA--------GATGAGACTTGACA---T---A............................................................................................................................................................................................................................2011.001000010
..................................................................................................................TT--------TAAGAGCA--------GATGAGACTT........................................................................................................................................................................................................................................2011.001000001
..........................................................................................................GGG----CTT--------TAAGAGCA--------GATGAGACTTGAC.....................................................................................................................................................................................................................................2711.001010000
.....ATTC--AAACAGGTAGTTTAGGCA-TGGC............................................................................................................................................................................................................................................................................................................................................................2611.001010000
................................................................................................................................AGCA--------GATGAGACTTGACA---T---AGC..........................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................CCGC-ATTGACGACGTCTTTA......................................................................................................................................................................................................2011.001010000
..................................................................................AGACTACAGTG------------AGGG----CTT--------TAAGAGCA--------..................................................................................................................................................................................................................................................2611.001010000
.....................................................................................CTACAGTG------------AGGG----CTT--------TAAGAGCA--------GAT...............................................................................................................................................................................................................................................2611.001000001
........................................................................................................................................................................................GTAACCTGATACCTTGTTAA-----AT-------TG..................................................................................................................................................................2411.001100000
....................................................................................................................................................................CGC-ATTGACGACGTCTTC.......................................................................................................................................................................................................1811.001010000
.....................................................................................CTACAGTG------------AGGG----CTT--------TAAGAGCA--------GATG..............................................................................................................................................................................................................................................2711.001100000
...................................................................................GACTACAGTG------------AGGG----CTT--------TAAGAGCA--------GA................................................................................................................................................................................................................................................2711.001000001
droBip1
GTAAATG-TT-AAACAGGTTGTTTAGGCT-TGGCATACAACGT-------CTA-----------------------GTTAA---------------------TAGACCA----CTA--------CATGAGCA--------GCTGAGGTTTGACA---C---AGCCGC-ATTGACGACGTCTTTAGTAATCTGATATCTAGTTAA-----ATTCAC---TGC----------ACATCTAT--ATCA--T---------TATTT--------------------CA--------T-TTTTACAGTAAACCATTTTTTT-----TTTAATTTTAGGTAATTCGAACGAAGTCCAAGGGAAGTGGTTGGTTTGATCTTCCCGCAACSizeHit CountTotal NormTotal
No Reads
dp5
GTCAAGTTCA-AGGCAGACAGTTTAGAGCTGGGCTAATATTCTTT-----CCA---T---------ATAATGAAACGCTAA------------A--AAGTTATTGTCGA----CCC----ACAC-AGCAGTT--------GCTAAGGCTTGAGCTAGA---AGCCAC-ATTGACGACGTCTTTAGTAATCTGATAGACCAGT----------------AGTTCAAATA----------TGAAG--TACGTATA-GCA--TAT--------------------CATATACTAA-----------AAAAC------TC-------ATTTTTTAGGCGGAACGTGCAAAAACTAAAGGCAGCGGATGGTTCGATCTGCCAGCCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................GACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................21110.00100810010000
.................................................................................................................................................................................GTCTTTAGTAATCTGATA...........................................................................................................................................................................................1815.0050010200002
...............................................................................................................................................................................ACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2015.0051200100001
........................................................................................................................................................GCTAGA---AGCCAC-ATTGACGAC.............................................................................................................................................................................................................2112.0020020000000
.....................................................................................................................................................................AC-ATTGACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2912.0020011000000
........................................................................................................................................................................ATTGACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2712.0020000001001
.....................................................................................................ATTGTCGA----CCC----ACAC-AGCAGTT--------..................................................................................................................................................................................................................................................2212.0020010100000
..............................GGGCTAATATTCTTT-----CCA---T---------AT..........................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................ATTGTCGA----CCC----ACAC-AGCAGT...........................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................GCTAGA---AGCCAC-ATTGACGACGT...........................................................................................................................................................................................................2311.0010010000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGATAA..........................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................TTTTAGGCGGAACGTGCAAAA...................................2111.0010100000000
............................................................................................................................................GCTAAGGCTTGAGCTAGA---AGC..........................................................................................................................................................................................................................2111.0010010000000
.............................................................................................A--AAGTTATTGTCGA----CCC----ACAC-AGC..............................................................................................................................................................................................................................................................2411.0010000100000
.................................................................................................................................................................................GTCTTTAGTAATCTGATAG..........................................................................................................................................................................................1911.0010010000000
.................................................................................................AGTTATTGTCGA----CCC----ACAC-AGCA.............................................................................................................................................................................................................................................................2311.0010010000000
.........................................................................................................................CAC-AGCAGTT--------GCTAAGGCTTGA......................................................................................................................................................................................................................................2211.0010000100000
...........................................................................CGCTAA------------A--AAGTTATTGTCGA----CC...........................................................................................................................................................................................................................................................................2211.0010010000000
.................ACAGTTTAGAGCTGGGCTAATATTC....................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...........................................................................................................................C-AGCAGTT--------GCTAAGGCTTGAGCT...................................................................................................................................................................................................................................2311.0010000100000
....................................................................................................TATTGTCGA----CCC----ACAC-AGCAGTT--------..................................................................................................................................................................................................................................................2311.0010010000000
...........................GCTGGGCTAATATTCTTT-----C...........................................................................................................................................................................................................................................................................................................................................1911.0010000100000
..........................................................................................................CGA----CCC----ACAC-AGCAGTT--------GCTA..............................................................................................................................................................................................................................................2111.0010000100000
..................CAGTTTAGAGCTGGGCTAATA.......................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
........................................................................................................GTCGA----CCC----ACAC-AGCAGT...........................................................................................................................................................................................................................................................1811.0010100000000
.................ACAGTTTAGAGCTGGGCTAATATTCTTC-----............................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..........................................................................................................CGA----CCC----ACAC-AGCAGTT--------GCTAAGGCT.........................................................................................................................................................................................................................................2611.0010010000000
......TTCA-AGGCAGACAGTTTAGAGC.................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.........................................CTTT-----CCA---T---------ATAATGAAACGC................................................................................................................................................................................................................................................................................................................2011.0010000000010
........................................................................................................................................................GCTAGA---AGCCAC-ATTGACGACG............................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................GTAATCTGATAGACCAGT----------------AGTT................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................CGTCTTTAGTAATCTGATAG..........................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2411.0010100000000
................................................................................................................................................................................CGTCTTTAGTAATCTGATA...........................................................................................................................................................................................1911.0010000100000
.........................................................................................................................................................CTAGA---AGCCAC-ATTGACGACGTCTTTAGT....................................................................................................................................................................................................2911.0010010000000
droPer2
GTCAAGTTCA-AGGCAGACAGTTTAGAGCTGGGCTAATATTCTTT-----CCA---T---------ATAATGAAACGCTAA------------A--AAGTTATTGTCGA----CCC----ACAC-AGCAGTT--------GCTAAGGCTTGAGCTAGA---AGCCAC-ATTGACGACGTCTTTAGTAATCTGATAGACCAGT----------------AGTTCAAATA----------TGAAG--TACGTATA-GTA--TAT--------------------CATATACTAA-----------AAAAC------TC-------ATTTTTTAGGCGGAACGTGCAAAAACTAAAGGCAGCGGATGGTTCGATCTGCCAGCCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................GTCTTTAGTAATCTGATA...........................................................................................................................................................................................181506.0050649916000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................21124.00242400000
................................................................................................................................................................................CGTCTTTAGTAATCTGATA...........................................................................................................................................................................................19110.0010802000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................20110.00101000000
........................................................................................................................................................................ATTGACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2718.008710000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2217.007600100
........CA-AGGCAGACAGTTTAGAGCT................................................................................................................................................................................................................................................................................................................................................................2116.006600000
.........................................................................AACGCTAA------------A--AAGTTATTGTCGA----CCC----......................................................................................................................................................................................................................................................................2513.003300000
................................................................................................................................................................................CGTCTTTAGTAATCTGATAG..........................................................................................................................................................................................2013.003201000
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2313.003300000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2413.003010101
.........................................................................................................................................................CTAGA---AGCCAC-ATTGACGACGT...........................................................................................................................................................................................................2213.003120000
.........................................................................................................................................................CTAGA---AGCCAC-ATTGACGAC.............................................................................................................................................................................................................2012.002200000
.....................................................................................................ATTGTCGA----CCC----ACAC-AGCA.............................................................................................................................................................................................................................................................1912.002002000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2512.002200000
........................................................................................................................................................GCTAGA---AGCCAC-ATTGACGAC.............................................................................................................................................................................................................2112.002002000
.....................................................................................................ATTGTCGA----CCC----ACAC-AGCAGT...........................................................................................................................................................................................................................................................2112.002200000
..................................................................................................................................................................................TCTTTAGTAATCTGATAG..........................................................................................................................................................................................1812.002200000
...............................................................................AA------------A--AAGTTATTGTCGA----CC...........................................................................................................................................................................................................................................................................1812.002200000
..........................................................................ACGCTAA------------A--AAGTTATTGTCGA----CC...........................................................................................................................................................................................................................................................................2312.002200000
.....................................................................................................................................................................AC-ATTGACGACGTCTTTAGTAATCTGATA...........................................................................................................................................................................................2912.002200000
.....................................................................................................................................................................................TTAGTAATCTGATAGACC.......................................................................................................................................................................................1812.002200000
..........................................................................ACGCTAA------------A--AAGTTATTGTCGA----CCC----......................................................................................................................................................................................................................................................................2412.002200000
.....................................................................................................ATTGTCGA----CCC----ACAC-AGCAGTT--------..................................................................................................................................................................................................................................................2211.001001000
.................................................................................................................................................................................GTCTTTAGTAATCTGATAG..........................................................................................................................................................................................1911.001001000
............................................................................GCTAA------------A--AAGTTATTGTCGA----CC...........................................................................................................................................................................................................................................................................2111.001100000
................................................................................A------------A--AAGTTATTGTCGA----CCC----ACAC-AGCAG............................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................GTCTTTAGTAATCTGATG...........................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................GTAATCTGATAGACCAGT----------------AGTT................................................................................................................................................................2211.001010000
..........................................................................................................CGA----CCC----ACAC-AGCAGTT--------GCT...............................................................................................................................................................................................................................................2011.001001000
.................................................................................................................................................................AGCCAC-ATTGACGACGTCTTTA......................................................................................................................................................................................................2211.001001000
...........................................................................CGCTAA------------A--AAGTTATTGTCGA----CCC----......................................................................................................................................................................................................................................................................2311.001100000
......TTCA-AGGCAGACAGTTTAGAGCT................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................AGTTTAGAGCTGGGCTAATATTC....................................................................................................................................................................................................................................................................................................................................................2311.001000100
.........................................................................................................TCGA----CCC----ACAC-AGCAGTT--------GCTA..............................................................................................................................................................................................................................................2211.001010000
....................................................................................................TATTGTCGA----CCC----ACAC-AGCAGTT--------G.................................................................................................................................................................................................................................................2411.001100000
............................................................................GCTAA------------A--AAGTTATTGTCGA----CCC----......................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................GTT--------GCTAAGGCTTGAGCTAGA---.............................................................................................................................................................................................................................2111.001000001
....................................................................................................TATTGTCGA----CCC----ACAC-AGCA.............................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................GCTAGA---AGCCAC-ATTGACGACGT...........................................................................................................................................................................................................2311.001001000
.................................................................................................................................................................................GTCTTTAGTAATCTGATAGA.........................................................................................................................................................................................2011.001100000
...........................................................................CGCTAA------------A--AAGTTATTGTCGA----CC...........................................................................................................................................................................................................................................................................2211.001100000
droWil2
TTCAAGTTTTTCAGTAAATAATTTAGGCCACGGCTGACAAATCTTAATCTCCC---T---------CTATTGA----------------AACAT--AAGTTATAGTCCA----CCCA-ATACAC-AGCAATT--------GCCGAGGCCTGACTAAGTTTAGGGCAA-TTTGACGACGTCTTTAGTAATCTGATTTCAAGTAAA--------------AAAAAA---TTTAATTAGTAA--AAA-------------AAA--ATT-----ATCCCAATTGTT----------T-ATTGATTGTTTATTATA--TTTT----TATACTTTCAGATTGAACGTGCCAAGACAAAAGGCAGCGGTTGGTTCGATTTGCCTGCCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................GACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................21110.001032410
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2218.00811213
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2415.00521002
...............................................................................................................................................................................ACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2014.00420002
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2514.00410003
...................AATTTAGGCCACGGCTGACA.......................................................................................................................................................................................................................................................................................................................................................2013.00301020
........................................................................................................................................................................TTTGACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2713.00300003
......................................................................................................................................................................A-TTTGACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2813.00310200
................................................................................................................................................................................CGTCTTTAGTAATCTGATT...........................................................................................................................................................................................1913.00311001
.........................................................................................................................................................................TTGACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2613.00300111
.................................................................................................................................................................................GTCTTTAGTAATCTGATT...........................................................................................................................................................................................1813.00300030
..............................................................................................................................GCAATT--------GCCGAGGCCTGACTA...................................................................................................................................................................................................................................2112.00202000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGATTT..........................................................................................................................................................................................2312.00201100
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2312.00201001
...........................................................................................................CA----CCCA-ATACAC-AGCAATT--------GCCGAGGCCT........................................................................................................................................................................................................................................2911.00101000
......................................................................................................................................................GACTAAGTTTAGGGCAA-TTTGACGACGT...........................................................................................................................................................................................................2811.00100100
...................................................................................................................................T--------GCCGAGGCCTGACTAAGTTTAGGG..........................................................................................................................................................................................................................2511.00100100
............................................................................................................................................................GTTTAGGGCAA-TTTGACGAC.............................................................................................................................................................................................................2011.00101000
......................................................................................................................................................GACTAAGTTTAGGGCAA-TTTGAC................................................................................................................................................................................................................2311.00100010
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2511.00110000
...................................................................................................................................................................GCAA-TTTGACGACGTCTTTAGT....................................................................................................................................................................................................2211.00100100
.................ATAATTTAGGCCACGGCTGACAAAT....................................................................................................................................................................................................................................................................................................................................................2511.00110000
......................................................................................................................................................GACTAAGTTTAGGGCAA-TTTGACGAC.............................................................................................................................................................................................................2611.00100100
..............................................................................................................................................................TTAGGGCAA-TTTGACGACGTCT.........................................................................................................................................................................................................2211.00100100
.................................................................................................................................................................................GTCTTTAGTAATCTGATA...........................................................................................................................................................................................1811.00110000
.....................................................................................................................................................................AA-TTTGACGACGTCTTTAGTAATCTGATT...........................................................................................................................................................................................2911.00101000
...................AATTTAGGCCACGGCTGACAAAT....................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................AATTTAGGCCACGGCTGACAAATC...................................................................................................................................................................................................................................................................................................................................................2411.00100001
...............................GGCTGACAAATCTTAATCTCCC---T---------C...........................................................................................................................................................................................................................................................................................................................2411.00101000
...................................................................................................................................................................................................................................................................................................................................TACTTTCAGATTGAACGTGCC......................................2111.00100010
.................................................................................................................................................................GGGCAA-TTTGACGACGTCTT........................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................TTTAGGGCAA-TTTGACGACGT...........................................................................................................................................................................................................2111.00100010
...........................CCACGGCTGACAAATCTTAATC.............................................................................................................................................................................................................................................................................................................................................2211.00110000
droVir3
ATTAAGTC-A-AGACAAATGATTTAGGCTTGGGCGTACAATCTTT----ATTT---T---------TTATTGA----------------AACA---GTGCTATTGTCGC----CCAAAACACAC-AGCAGTA--------GCTGAGGCA-GGTTTTGT---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCTCATCCATGCCAAA-------TATTTGTATT----------TAAAA--TACG---A-GCT--T-----------------------------------TCCATGTATAAACAAA--TTTG----TATACGTACAGGCCGAGCGAGCAAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCGGCTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................CCAC-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................321210.0021000000000000000000000000000000000000000001112000261733111715139100000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................33143.00430000000000000000000000000000000000000000003201031123120131820000
..........................................................................................................CGC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................20131.00310013000000001001002201100000100000300100000000000000000000001040
...................................................................................................................................................................CCAC-ATTGACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................31126.00260000000000000000000000000000000000000000000000000000001312100000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................25124.00244230000000000000001000000000000000000000000000000000000000010130
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................26124.0024007000000000000010000000000000010000000000000000000000000006090
...................................................................................................................................................................CCAC-ATTGACGACGTCTTTAGTAATCTGAG............................................................................................................................................................................................3019.009000000000000000000000000000000000000000000000000000000010800000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2019.009003200000000000000000000001000000000000000000000000000000003000
....................................................................................................................................................................CAC-ATTGACGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................3318.008000000000000000000000000000000000000000000000021100011000020000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2318.008104000000000000000000000000000000000001000000000000000000001010
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................1917.007001000000000000100000000002000000000000000000000000000010000101
...................GATTTAGGCTTGGGCGTACAATC....................................................................................................................................................................................................................................................................................................................................................2317.007101000000100000000000000000000000000000000000000000000000000040
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2516.006201000000000000000000000000000000010000000000000000000000000020
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2216.006003000000000000100000000000000000000000000000000000000000001010
........................................................................................................GTCGC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................2216.006006000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2216.006101000000000000000000000000000000000000000000000000000000000220
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................3516.006000000000000000000000000000000000000000000000100001210000010000
...................GATTTAGGCTTGGGCGTACAAT.....................................................................................................................................................................................................................................................................................................................................................2215.005001000000000000000000000000000000000000000000000000000000001030
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2015.005410000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2715.005012000000000000000000000000000000000000000000000000000000000020
...................................................................................................................................................................................CTTTAGTAATCTGAGTG..........................................................................................................................................................................................1715.005000000000000000000000000000000000000000000000000000000000000005
...................................................................................................................................................................CCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................3415.005000000000000000000000000000000000000000000010000000000000040000
.....................................................................................................ATTGTCGC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................2515.005001000000000000100000000000001000100000000000000000000000000010
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2715.005000200000000000000000000000000000000000000000000000000000003000
..........................................................................................................CGC----CCAAAACACAC-AGCAGTA--------..................................................................................................................................................................................................................................................2115.005002000000000000010000000000002000000000000000000000000000000000
................................................................................................................................................................................CGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2014.004100000000000000000000001000000010000000000000000000000000000010
........................................................................................................................................................................ATTGACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2714.004100000000000000000000000000000000000000000000000000000000000030
.......................................................................................................TGTCGC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................2314.004003000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2114.004000010000000000000000000000000000010000100000000000000000000100
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2414.004003000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2413.003001000000000000000000000000000000000000000000000000000000100010
.............................................................................................................................................................T---TGCCAC-ATTGACGACGTCTT........................................................................................................................................................................................................2112.002000000001000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................GTCTTTAGTAATCTGAGT...........................................................................................................................................................................................1812.002001000000000000000000000000000000000000000000000000000000000001
.......................................................................................................TGTCGC----CCAAAACACAC-AGCAGTA--------..................................................................................................................................................................................................................................................2412.002001000000000000000000100000000000000000000000000000000000000000
....................ATTTAGGCTTGGGCGTACAATC....................................................................................................................................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TTTAGTAATCTGAGTG..........................................................................................................................................................................................1612.002000000000000000000000000000000000000000000000001000001000000000
........................................................................................................................................................................................GTAATCTGAGTGCTCATCCATGCCA.............................................................................................................................................................................2512.002001000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................C-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2912.002000000000000000000000000000000000000000000000000000000000000020
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2012.002001000000000000000000000000000000000000000000000000000000000010
................AATGATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................1812.002100100000000000000000000000000000000000000000000000000000000000
.............ACAAATGATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................2112.002110000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GACGACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CTTTAGTAATCTGAGTGCT........................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TCGC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................2112.002001000000000001000000000000000000000000000000000000000000000000
..........................................................................................................CGC----CCAAAACACAC-AGCAGC...........................................................................................................................................................................................................................................................2012.002000100000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................3412.002000000000000000000000000000000000000000000000000000000002000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTT.......................................................................................................................................................................................................2012.002000100000000001000000000000000000000000000000000000000000000000
.........................................................................................AACA---GTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................1812.002000000020000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGTAATCTGAG............................................................................................................................................................................................3112.002000000000000000000000000000000000000000000000000000000010100000
...........................................................................................................GC----CCAAAACACAC-AGCAGT...........................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
......................................................................TGA----------------AACA---GTGCTATTGTCGC----CC...........................................................................................................................................................................................................................................................................2212.002001000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................CGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2112.002001000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2312.002020000000000000000000000000000000000000000000000000000000000000
.................ATGATTTAGGCTTGGGCGTACAATC....................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................CGC----CCAAAACACAC-AGCA.............................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................C-ATTGACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCTGAGGCA-GGTTTTGT---TGCC.........................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................TTATTGA----------------AACA---GTGCTATTGTCGC----CCAA.........................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AGCAGTA--------GCTGAGGCA-GGTTTT..................................................................................................................................................................................................................................2211.001000000000000000000000000000000100000000000000000000000000000000
...................GATTTAGGCTTGGGCGTACAATCC...................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
....................................................................ATTGA----------------AACA---GTGCTATTGT....................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
............GACAAATGATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................GTA--------GCTGAGGCA-GGTTTT..................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTCGC----CCAAAACACAC-AGCAGTA--------..................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGTGT.........................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
......................................................................TGA----------------AACA---GTGCTATTGTC...................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................GTTTTGT---TGCCAC-ATTGACGAC.............................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
....................................................................ATTGA----------------AACA---GTGCTATTGTCG..................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................ACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATTGTCGC----CCAAAACACAC-AGCAGTA--------..................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTCGC----CCAAAACACAC-AGCA.............................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TTTAGTAATCTGAGTGCAA.......................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................TAATCTGAGTGCTCATCCATGCCA.............................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
........................................................T---------TTATTGA----------------AACA---GTGCTAT.......................................................................................................................................................................................................................................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGT....................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GAGCAAAGACGAAGGGCA.........................1811.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................AGCGAGCAAAGACGAAGGGC..........................2011.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................TTGACGACGTCTTTAGT....................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................CTTTAGTAATCTGAGTGC.........................................................................................................................................................................................1811.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................CGACGTCTTTAGTAATCTGAGG...........................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................ATTGA----------------AACA---GTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CTTTAGTAATCTGAGTGCA........................................................................................................................................................................................1911.001000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................AC-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................CTGAGGCA-GGTTTTGT---TGCCAC-......................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................TTGA----------------AACA---GTGCTATTGT....................................................................................................................................................................................................................................................................................1811.001000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCTC.......................................................................................................................................................................................3611.001000000000000000000000000000000000000000000010000000000000000000
....................................................................................................................................................................................TTTAGTAATCTGAGTGCT........................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTGACGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTAATCTGAGTGCTCATCCATGTTT.............................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
................AATGATTTAGGCTTGGGCG...........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
....................................................................ATTGA----------------AACA---GTGCTATTGTCGC----CCA..........................................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................GTAATCTGAGTGCTCATCCATGTT..............................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTGACGACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GCA-GGTTTTGT---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................4711.001000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAAT.................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A--------GCTGAGGCA-GGTTTTGT---TGCC.........................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTA......................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................ATCTGAGTGCTCATCCATGCC..............................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................T---------TTATTGA----------------AACA---GTGCTATTGT....................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CCAC-ATTGACGACGTCTTTA......................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................A---GTGCTATTGTCGC----CCAAAAC......................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................GATTTAGGCTTGGGCGTAC........................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCTTTAGTAATCTGAGTG..........................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................AACA---GTGCTATTGTCGC----CCG..........................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.....................TTTAGGCTTGGGCGTACAATCT...................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................ATGATTTAGGCTTGGGCGTACA.......................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTGACGACGTCTTTAGTAATCTGAGC...........................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................A--------GCTGAGGCA-GGTTTTGT---.............................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................CA---GTGCTATTGTCGC----CCA..........................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTGCTT.......................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................TTGGGCGTACAATCTTT----ATTT---......................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.....................TTTAGGCTTGGGCGTACAATC....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................CGC----CCAAAACACAC-AGCAG............................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGTGA.........................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................TGACGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................GTAATCTGAGTGCTCATCCATT................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................AACA---GTGCTATTGTCGC----CC...........................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTT........................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTAGTAATCTGAGTGCT........................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................A--------GCTGAGGCA-GGTTTTGT---TG...........................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................GATTTAGGCTTGGGCGTACAATCT...................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.....GTC-A-AGACAAATGATTTAGGCT.................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
......................................................................TGA----------------AACA---GTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
..................................................TTT---T---------TTATTGA----------------AACA---GTGCT.........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................GCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGAA........................................................................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000010000
.........A-AGACAAATGATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTCGC----CCAAAACACAC-AGC..............................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
................AATGATTTAGGCTTGGGCGTACAATC....................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTGCA........................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
.............................TGGGCGTACAATCTTT----ATTT---T---------TT..........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................C-AGCAGTA--------GCTGAGGCA-GGTT....................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................GCTGAGGCA-GGTTTTGT---TGC..........................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...........AGACAAATGATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................T---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000001000000
.......................................................................GA----------------AACA---GTGCTATTGTCGC----.............................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATTGTCGC----CCAAAACACAC-AGCA.............................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
...................................................................TATTGA----------------AACA---GTGCTATTGTCGC----CCA..........................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................TCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
...................GATTTAGGCTTGGGC............................................................................................................................................................................................................................................................................................................................................................1520.501000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................CATCCATGCCAAA-------TATTCC..............................................................................................................................................................1940.251001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTAATCTGAGTGCTCATTTT..................................................................................................................................................................................20140.142001000000000000000100000000000000000000000000000000000000000000
droMoj3
ATCGAGTC-A-AGGCAGATGATTTAGGCGTGGGCGCACAATTTTA----ACTA---A---------TCAATGA----------------AACAT-AGTGCTATTGTCGC----CCCA-AAACAC-AGCAGTG--------GCCAAGGCA-GACGTTGT---TGCCAC-ATTGATGACGTCTTTAGTAATCTGAGTGCTGCTGCT----------C-CTAGTAAA---TGAATGCACCAA--ATTA--TG-------A--TTT--------------------CGTC-------------TACAGAAACGTA--CTTG---GTTTAATTACAGGCGGAACGTGCTAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCGGCAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................ATGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................24124.002414000010
...........................................................................................................................................................................GATGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................25111.0011101009
...........................................................................................................................C-AGCAGTG--------GCCAAGGCA-GACG....................................................................................................................................................................................................................................2119.009020070
.............................................................................................................................................................................TGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2317.007500002
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2217.007600001
........................................................................................................................................................................ATTGATGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2816.006200004
.........................................................................................................................................................................TTGATGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2715.005200003
................................................................................................................................................................................CGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2015.005400001
...............................................................................................................................................................................ACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2113.003300000
...................................................................................................................................................................................CTTTAGTAATCTGAGTGCA........................................................................................................................................................................................1913.003300000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................1913.003200001
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2413.003200001
..........................................................................................................................................................................TGATGACGTCTTTAGTAATCTGAGTG..........................................................................................................................................................................................2613.003000003
..................................................................................................................................................................GCCAC-ATTGATGACGTCTTTAGTA...................................................................................................................................................................................................2413.003200001
............................................................................................................................................................................ATGACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2513.003000003
...................................................................................................................................................................................CTTTAGTAATCTGAGTGCTG.......................................................................................................................................................................................2012.002100100
...........AGGCAGATGATTTAGGCGTGG..............................................................................................................................................................................................................................................................................................................................................................2112.002000002
.....................................................................................................ATTGTCGC----CCCA-AAACAC-AGCAGT...........................................................................................................................................................................................................................................................2412.002200000
...................................................................................................................................................................................CTTTAGTAATCTGAGTGCT........................................................................................................................................................................................1912.002100001
...................................................................................................................................................................CCAC-ATTGATGACGTCTTTAGTA...................................................................................................................................................................................................2312.002200000
..............................................................................................................................GCAGTG--------GCCAAGGCA-GACG....................................................................................................................................................................................................................................1912.002000011
.........................................................................................................................................................GTTGT---TGCCAC-ATTGATGACGTC..........................................................................................................................................................................................................2312.002001001
........................................................................................................GTCGC----CCCA-AAACAC-AGCAGT...........................................................................................................................................................................................................................................................2112.002100001
............................................................................................................................................................................ATGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2612.002100001
............................................................................................AT-AGTGCTATTGTCGC----CCCA-A.......................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................CAT-AGTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................1811.001000010
................GATGATTTAGGCGTGGGC............................................................................................................................................................................................................................................................................................................................................................1811.001100000
............................GTGGGCGCACAATTTTA----ACTA---A---------TCAATG......................................................................................................................................................................................................................................................................................................................2811.001000001
............................................................................................AT-AGTGCTATTGTCGC----CCC..........................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTGCTG.......................................................................................................................................................................................2211.001000001
...................................................................................................................................................................CCAC-ATTGATGACGTCTTTAGTAATC................................................................................................................................................................................................2611.001100000
.............................................................................................................................AGCAGTG--------GCCAAGGCA-GACG....................................................................................................................................................................................................................................2011.001000010
..............................GGGCGCACAATTTTA----ACTA---A---------TC..........................................................................................................................................................................................................................................................................................................................2211.001000001
.......................................................................GA----------------AACAT-AGTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................2211.001000010
............................................................................................................................................................................ATGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2311.001000001
........................................TTTTA----ACTA---A---------TCAATGA----------------AAC..................................................................................................................................................................................................................................................................................................2011.001100000
....AGTC-A-AGGCAGATGATTTAGGCGT................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2311.001000001
............................................................................................AT-AGTGCTATTGTCGC----CCCA-........................................................................................................................................................................................................................................................................2011.001100000
............................................................................................................................................GCCAAGGCA-GACGTTGT---TGCC.........................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................GTTGT---TGCCAC-ATTGATGACGTCTTTA......................................................................................................................................................................................................2711.001000001
...............................................................................................................................................AAGGCA-GACGTTGT---TGCCAC-ATTGATG...............................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................GACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2111.001100000
..................TGATTTAGGCGTGGGCGCACAATTT...................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................GCAGTG--------GCCAAGGCA-GACGT...................................................................................................................................................................................................................................2011.001000010
....................................................................AATGA----------------AACAT-AGTGCTATTGTCGC----C............................................................................................................................................................................................................................................................................2511.001010000
.......................................................................GA----------------AACAT-AGTGCTATTGTCGC----.............................................................................................................................................................................................................................................................................2111.001000010
...........AGGCAGATGATTTAGGCGT................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..................TGATTTAGGCGTGGGCGCACAATTTTA----.............................................................................................................................................................................................................................................................................................................................................2711.001000001
................................................................................................................................................................................CGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................1911.001000100
........................................................................................................................................................................ATTGATGACGTCTTTAGTAATCTGAGT...........................................................................................................................................................................................2711.001100000
.......................................................................................................TGTCGC----CCCA-AAACAC-AGCAGT...........................................................................................................................................................................................................................................................2211.001001000
...........................CGTGGGCGCACAATTTTA----ACTA---......................................................................................................................................................................................................................................................................................................................................2211.001000001
.............................................................................................................................................CCAAGGCA-GACGTTGT---TGCCAC-ATTG..................................................................................................................................................................................................................2611.001000001
...........................................................................................................................C-AGCAGTG--------GCCAAGGCA-GAT.....................................................................................................................................................................................................................................2011.001000010
...................................................TA---A---------TCAATGA----------------AACAT-AGTGCT.........................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................CAC-ATTGATGACGTCTTTAGTAA..................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................TCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................1911.001100000
...........................................................................................................................C-AGCAGTG--------GCCAAGGCA-GAC.....................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................CCAC-ATTGATGACGTCTTTAGTAAT.................................................................................................................................................................................................2511.001000001
........................................................................................................GTCGC----CCCA-AAACAC-AGCAGTG--------..................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................CAC-ATTGATGACGTCTTTAGTAATC................................................................................................................................................................................................2511.001100000
...................GATTTAGGCGTGGGCGCACAAT.....................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....GTC-A-AGGCAGATGATTTAGGCGTGGG.............................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................GATTTAGGCGTGGGCGCACAATT....................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................GCCAC-ATTGATGACGTCTTTAG.....................................................................................................................................................................................................2211.001000001
..................................................................................................................................................................GCCAC-ATTGATGACGTCTT........................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................GATGACGTCTTTAGTAATCTGAGTGCT........................................................................................................................................................................................2711.001000001
.......C-A-AGGCAGATGATTTAGGC..................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................TGCTAAGACGAAGGGCAGCGGCTG..................2411.001100000
......................TTAGGCGTGGGCGCACAATTTTA----ACT..........................................................................................................................................................................................................................................................................................................................................2611.001100000
............................GTGGGCGCACAATTTTA----ACTA---......................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................CCAC-ATTGATGACGTCTTTAGT....................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................GTCTTTAGTAATCTGAGTGC.........................................................................................................................................................................................2011.001100000
....................................................................AATGA----------------AACAT-AGTGCTATTGTCGC----.............................................................................................................................................................................................................................................................................2411.001000010
droGri2
CTCAAGCTAA-AGCCAAATAATTTAGGCGTGGGCTCACAATTATC-----TTATT-T---------TAAATGAAACGCT-------------AG--GTGCTATTGTCGC----CCCA--TGCAC-AGTAGTT--------ATCGAGGCAGGTGTT-GT---TGCCAC-ATTGACGACGTCTTTAGTAATCTGAGTGCTCAACTATGCTAAT-------TATCTT---T------------------ATATATATGTA--TATC-------------------CAAATATAAA----------AGAATCTTA---TT-----ATTAATTACAGTCTGAACGCAGCAAGACGAAGGGCAGCGGCTGGTTTGATTTGCCAGCAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................CGC----CCCA--TGCAC-AGTAGTT--------..................................................................................................................................................................................................................................................1911.00110
........................................................................................................................GCAC-AGTAGTT--------ATCGAGG...........................................................................................................................................................................................................................................1811.00110
...............................................................................................................................TAGTT--------ATCGAGGCAGGTGTT-..................................................................................................................................................................................................................................2011.00101
.................................................................................................................................GTT--------ATCGAGGCAGGTGTT-GT---TG...........................................................................................................................................................................................................................2211.00101
................AATAATTTAGGCGTGGGCTCACA.......................................................................................................................................................................................................................................................................................................................................................2311.00101
....................................................................................................................A--TGCAC-AGTAGTT--------ATCGAGGCA.........................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 12:02 AM