ID:

dse_1331

 Coordinate:

scaffold_41:238221-238371 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.4 -27.2 -27.0

Flybase annnotation

CDS [Dsec\GM22497-cds]; exon [dsec_GLEANR_5283:3]; intron [Dsec\GM22497-in]

Repeatable elements

NameClassFamilyStrand
DMRT1CLINER1+
DMRT1CLINER1+
mature
  1. scaffold_655:1316-1339 -
  2. scaffold_859:9148-9171 +
  3. scaffold_2080:1044-1067 -
  4. scaffold_3689:2005-2028 +
  5. scaffold_5223:608-631 -
  6. scaffold_26:83912-83935 -
  7. scaffold_26:109255-109278 -
  8. dse_1331  scaffold_41:238338-238361 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGCAATGCTTCACGGCCATACCGCGGGCGGGTCCTGGATTTGCCCTCCTTACTGTTACCTTGTAAATAGTTAAATAGTTAATCCTAATTATGTTCGATGAACGAATTAAAAAAAAAAAAAAAAACACGCGGGAAGTCGGGTGCATCGAGTTATCGCTCCTGGAAAATCTCTAAATTTTCCGGGTCGCGCCGGCCCGACAGAGACAGGAGCGCCTGTCCCTAACGTACTCACCAGCAGTAGGCACAGCTCC
**********************************************************************************...........(((((((.........................(((.(((....))).))))))))))....(((.((((((((((......))))))))))..)))..************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCC............................................................ 24 0 8 6.50 52 45 7 0
.........TTCACGGCCATACCGCGGGCGGGTC......................................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGC............................................................. 23 0 8 1.88 15 14 1 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAGC... 25 0 20 1.45 29 25 2 2
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCG........................................................... 25 0 8 1.38 11 10 1 0
..................................CTGGATTTGCCCTCCTTACTGTTACC............................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0
..........TCACGGCCATACCGCGGGCGGGTC......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0
..................................................................................TCCTAATTATGTTCGATGAACGAA................................................................................................................................................. 24 0 1 1.00 1 0 0 1
......TGCTTCACGGCCATACCGCGGGCGGGTC......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0
.............................................................................................................................................TGCATCGAGTTATCGCTCCTGGAAAT.................................................................................... 26 1 1 1.00 1 0 0 1
...................................................................................................................................GGAAGTCGGGTGCATCGAGTTATCGC.............................................................................................. 26 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................TGTCCCTAACGTACTCACCAGCAGT............ 25 0 1 1.00 1 1 0 0
.........TTCACGGCCATACCGCGGGCGGG........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0
......................................................................................................................AAAAAAACACGCGGGAAGT.................................................................................................................. 19 0 1 1.00 1 1 0 0
........................................................................................................................................................................................................................TCCCTAACGTACTCACCAGCAGT............ 23 0 1 1.00 1 1 0 0
.............................................................TGTAAATAGTTAAATAGTTAATCC...................................................................................................................................................................... 24 0 1 1.00 1 0 1 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCGGC......................................................... 27 0 6 0.67 4 4 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCT........................................................... 25 1 8 0.63 5 4 1 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCG.............................................................. 22 0 8 0.63 5 5 0 0
........................................................................................................................................................................CTCTAAATTTTCCGGGTCGCGCC............................................................ 23 0 8 0.50 4 4 0 0
.........TTCACGGCCATACCGCGGGCGG............................................................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0
........................................................................................................................................................................CTCTAAATTTTCCGGGTCGCGC............................................................. 22 0 8 0.50 4 4 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAGCT.. 26 0 20 0.40 8 7 1 0
.........................................................................................................................................................................................CGCGCCGGCCCGACAGAGACAGGAGC........................................ 26 0 6 0.33 2 0 2 0
..............................................................................................................................................................................................CGGCCCGACAGAGACAGGAGC........................................ 21 0 6 0.33 2 1 1 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAGCTC. 27 0 18 0.28 5 5 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAG.... 24 0 20 0.25 5 2 3 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCGT.......................................................... 26 1 8 0.25 2 2 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGC............................................................... 21 0 8 0.25 2 1 1 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACA..... 23 0 20 0.20 4 2 0 2
........................................................................................................................................................................................TCGCGCCGGCCCGACAGAGACAGGAGC........................................ 27 0 6 0.17 1 1 0 0
...........................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCCCGAC.................................................... 28 0 6 0.17 1 1 0 0
.........................................................................................................................................................................................CGCGCCGGCCCGACGGAGACAGGAGC........................................ 26 1 6 0.17 1 0 1 0
.........................................................................................................................................................................TCTAAATTTTCCGGGTCGCGCCGGCC........................................................ 26 0 6 0.17 1 1 0 0
...........................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCCCGA..................................................... 27 0 6 0.17 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCGGCC........................................................ 28 0 6 0.17 1 1 0 0
................................................................................................................................................................................................................................GTACTCACCAGCAGTAGGCACAGC... 24 0 20 0.15 3 3 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGT............................................................. 23 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCC.............................................................. 22 1 8 0.13 1 0 1 0
.........................................................................................................................................................................TCTAAATTTTCCGGGTCGCGC............................................................. 21 0 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGACGCG.............................................................. 22 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGTGC............................................................. 23 1 8 0.13 1 0 1 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCCCCG........................................................... 25 1 8 0.13 1 1 0 0
.........................................................................................................................................................................TCTAAATTTTCCGGGTCGCGCC............................................................ 22 0 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGAGTCGCGCC............................................................ 24 1 8 0.13 1 0 1 0
.......................................................................................................................................................................TCTCTAAATTTTCCCGGTCGCGC............................................................. 23 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTTCGGGTCGCGC............................................................. 23 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TTTCTAAATTTTCCGGGTCGCGCC............................................................ 24 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTACATTTTCCGGGTCGCGCC............................................................ 24 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCGCGCCGC.......................................................... 26 1 8 0.13 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGTGTCGCGCC............................................................ 24 1 9 0.11 1 1 0 0
.......................................................................................................................................................................TCTCTAAATTTTCCGGGTCCGC.............................................................. 22 3 9 0.11 1 1 0 0
.........TTCACGGCCATACCGCGGG............................................................................................................................................................................................................................... 19 0 20 0.10 2 1 0 1
................................................................................................................................................................................................................................GTACTCACCAGCAGTAGGCACAGATCA 27 2 18 0.06 1 1 0 0
.....................................................................................................................................................................................................................................CACCAGCAGTAGGCACAGCTC. 21 0 18 0.06 1 0 0 1
.................................................................................................................................................................................................................................TACTCACCAGCAGTAGGCACAGCTC. 25 0 18 0.06 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAGCTCC 28 0 18 0.06 1 1 0 0
.................................................................................................................................................................................................................................TACTCACCAGCAGTAGGCACAGCTCC 26 0 18 0.06 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGAAGTAGGCACAGC... 25 1 20 0.05 1 1 0 0
.......GCTTCACGGCCATACCGCGG................................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCACCATTAGGCACAGC... 25 2 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCAC...... 22 0 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GTACTCACCAGCAGTAGGCACAGCA.. 25 1 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGTCACAG.... 24 1 20 0.05 1 0 1 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGCAGGCACAGC... 25 1 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCACCAGTAGGCACA..... 23 1 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAT.... 24 1 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACAGTT.. 26 1 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GTACTCACCAGCAGTAGGCACAGA... 24 1 20 0.05 1 0 0 1
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCACATAA.. 26 3 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGTCACAGC... 25 1 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGGAGGCACAGCT.. 26 1 20 0.05 1 1 0 0
.........TTCACGGCCATACCGCGG................................................................................................................................................................................................................................ 18 0 20 0.05 1 0 1 0
...............................................................................................................................................................................................................................CGTACTCACCAGCAGTAGGCA....... 21 0 20 0.05 1 1 0 0

Anti-sense strand reads

TTCGTTACGAAGTGCCGGTATGGCGCCCGCCCAGGACCTAAACGGGAGGAATGACAATGGAACATTTATCAATTTATCAATTAGGATTAATACAAGCTACTTGCTTAATTTTTTTTTTTTTTTTTGTGCGCCCTTCAGCCCACGTAGCTCAATAGCGAGGACCTTTTAGAGATTTAAAAGGCCCAGCGCGGCCGGGCTGTCTCTGTCCTCGCGGACAGGGATTGCATGAGTGGTCGTCATCCGTGTCGAGG
************************************************************...........(((((((.........................(((.(((....))).))))))))))....(((.((((((((((......))))))))))..)))..********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V114
embryo
 V115
head
 V113
male body
.....................GGCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 23 0 1 11.00 11 8 3 0 0
.........................................................................................................................................................AGCGAGGACCTTTTAGAGATTTAA.......................................................................... 24 0 1 10.00 10 6 2 1 1
........................................................................................................................................................TAGCGAGGACCTTTTAGAGATTTAA.......................................................................... 25 0 1 9.00 9 4 5 0 0
.................................................................................................................................................................................................................CGCGGACAGGGATTGCATGAGTGG.................. 24 0 1 7.00 7 6 1 0 0
...........................................................................................................................................................CGAGGACCTTTTAGAGATTTAA.......................................................................... 22 0 8 6.38 51 10 36 4 1
...................ATGGCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 25 0 1 4.00 4 3 0 1 0
.....................................................................................................................................................CAATAGCGAGGACCTTTTAGAGATTTAA.......................................................................... 28 0 1 4.00 4 3 0 0 1
.........................................................................TTATCAATTAGGATTAATACAAGCT......................................................................................................................................................... 25 0 1 4.00 4 3 1 0 0
..........................................................................................................................................................GCGAGGACCTTTTAGAGATTTAA.......................................................................... 23 0 8 3.50 28 14 14 0 0
..................................................................................................................................................................................................................GCGGACAGGGATTGCATGAGTGG.................. 23 0 1 3.00 3 3 0 0 0
...................................................................................................................................................................................................................CGGACAGGGATTGCATGAGTGG.................. 22 0 1 3.00 3 3 0 0 0
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 25 0 6 2.50 15 6 9 0 0
......................................................................................................................................................................................CCAGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 27 0 6 2.17 13 10 3 0 0
.......................................................................................................................................................ATAGCGAGGACCTTTTAGAGATTTAA.......................................................................... 26 0 1 2.00 2 2 0 0 0
......................GCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 22 0 1 2.00 2 1 1 0 0
...................ATGGCGCCCGCCCAGGACCTAAACGG.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
........................................................................................................................................................TAGCGAGGACCTTTTAGAGATTAA........................................................................... 24 1 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................GGACAGGGATTGCATGAGTGGTC................ 23 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................................CGCGGACAGGGATTGCATCAGTGG.................. 24 1 1 1.00 1 1 0 0 0
....................TGGCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
........................................................................................................................................................................................................................AGGAATTGCATAAGTGGTC................ 19 2 1 1.00 1 0 0 0 1
...............CGGTATGGCGCCCGCCCAGGACCT.................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................GTCCTCGCGGACAGGGATTGCATGAGT.................... 27 0 1 1.00 1 1 0 0 0
............................................................................................................................................CACGTAGCTCAATAGCGAGGACCTT...................................................................................... 25 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................CGGACAGTGATTGAAAGAGTGGTC................ 24 3 1 1.00 1 1 0 0 0
.................................................AATGACAATGGAACATTTATCAAT.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................................GCTGACAGGGATTGCATGAGTGG.................. 23 1 1 1.00 1 1 0 0 0
........................................................ATGGAACATTTATCAATTTATCAATT......................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................GGACAGGGATTGCATGAGTGG.................. 21 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................................GGATTGCATGAGTGGTCGTCAT........... 22 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................................TGCGGACAGGGATTGCATGAGTGG.................. 24 1 1 1.00 1 1 0 0 0
.................GTAGGGCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
......................................................CAATGGAACATTTATCAATTTATCA............................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
.........................CCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................CGGACAGGGATTGCATGAGTGGT................. 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................................GATTGCATGAGTGGTCGTCATCC......... 23 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................................CGCGGACAGGGATTTCATGAGTGG.................. 24 1 1 1.00 1 1 0 0 0
...................................................TGACAATGGAACATTTATCAA................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
......................GCGCCCGCCCAGGACCTACG................................................................................................................................................................................................................. 20 2 1 1.00 1 0 1 0 0
.................GTATGGCGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................CGCGGACAGGGATTGCATGAGTGGT................. 25 0 1 1.00 1 1 0 0 0
.....................................................................CAATTTATCAATTAGGATTAATACAAGCT......................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................................GATTGCATGAGTGGTCGTCATCCG........ 24 0 1 1.00 1 0 1 0 0
......................................................................................................................................................AATAGCGAGGACCTTTTAGAGATTTAA.......................................................................... 27 0 1 1.00 1 1 0 0 0
...........................................................................ATCAATTAGGATTAATACAAGCT......................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
......................................................CAATGGAACATTTATCAATTTATCAA........................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.............................................................................................................................GTGCGCCCTTCAGCCCACGTAGCT...................................................................................................... 24 0 1 1.00 1 1 0 0 0
........................GCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................CGGACAGGGATTGCATGAGTGGTCGT.............. 26 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................AGGGATTGCATGAGTGGTCGTCAT........... 24 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................CGCGGACAGGGATTGCATGAGT.................... 22 0 1 1.00 1 0 1 0 0
.........................................AAAGGAGGAATGACAATGGAACAT.......................................................................................................................................................................................... 24 2 1 1.00 1 0 1 0 0
..............................................................................................................................................................................................................................TGCATGAGTGGTCGTCATCCGTGT..... 24 0 1 1.00 1 1 0 0 0
....................................CCTAAACGGGAGGAATGACAATGGAA............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.......................CGCCCGCCCAGGACCTAAACG............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.....................GGCGCCCGCCCAGGACCTAAAC................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................AGGGATTGCATGAGTGGTC................ 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................CAGCGCGGCCGGGCTGTCTCTGT............................................. 23 0 6 0.83 5 3 2 0 0
..................................................................................................................................................................................AGGCCCAGCGCGGCCGGGCTGTCT................................................. 24 0 6 0.67 4 3 1 0 0
.........................................................................................................................................................................................GCGCGGCCGGGCTGTCTCTGTCCT.......................................... 24 0 6 0.50 3 3 0 0 0
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCTCTGT............................................. 22 0 6 0.50 3 0 2 1 0
.......................................................................................................................................................................................CAGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 26 0 6 0.33 2 0 1 1 0
.....................................................................................................................................................................................CCCAGCGCGGCCGGGCTGTCTCTGT............................................. 25 0 6 0.33 2 2 0 0 0
..................................................................................................................................................................................AGGCCCAGCGCGGCCGGGCTGTCTCTGT............................................. 28 0 6 0.33 2 2 0 0 0
......................................................................................................................................................................................CCAGCGCGGCCGGGCTGTCTCTGT............................................. 24 0 6 0.33 2 1 1 0 0
..................................................................................................................................................................................AGGCCCAGCGCGGCCGGGCTGTC.................................................. 23 0 6 0.33 2 2 0 0 0
....................................................................................................................................................................................GCCCAGCGCGGCCGGGCTGTCTCT............................................... 24 0 6 0.33 2 1 1 0 0
......................................................................................................................................................................................CCAGCGCGGCCGGGCTGTCT................................................. 20 0 6 0.33 2 2 0 0 0
........................................................................................................................................................................................TGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 25 1 6 0.33 2 1 1 0 0
..........................................................................................................................................................................................CGCGGCCGGGCTGTCTCTGTCCT.......................................... 23 0 6 0.33 2 1 1 0 0
.........................................................................................................................................................................................................................GGAATTGCATAAGTGGTC................ 18 2 3 0.33 1 0 0 1 0
..................................GACCTAAACGGGAGGAATGACAAT................................................................................................................................................................................................. 24 0 4 0.25 1 0 1 0 0
............................................................................................................................................................GAGGACCTTTTAGAGATTTAA.......................................................................... 21 0 8 0.25 2 0 2 0 0
..................................................................................................................................................................................ATGCCCAGCGCGGCCGGGCTGTCT................................................. 24 1 6 0.17 1 1 0 0 0
.....................................................................................................................................................................................CCCAGCGCGGCCGGGCTGTCTCTGTC............................................ 26 0 6 0.17 1 0 1 0 0
.....................................................................................................................................................................................CCCAGCGCGGCCGGGCTGTCTCTGTCC........................................... 27 0 6 0.17 1 1 0 0 0
.......................................................................................................................................................................................TTGCGCGGCCGGGCTGTCTCTG.............................................. 22 2 6 0.17 1 0 1 0 0
................................................................................................................................................................................................CGGGCTGTCTCTGTCCTCGC....................................... 20 0 6 0.17 1 0 1 0 0
...................................................................................................................................................................................TCCCCAGCGCGTCCGGGCTGTCT................................................. 23 3 6 0.17 1 1 0 0 0
.......................................................................................................................................................................................TTGCGCGGCCGGGCTGTCTCTGT............................................. 23 2 6 0.17 1 0 1 0 0
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCTCTG.............................................. 21 0 6 0.17 1 0 1 0 0
.....................................................................................................................................................................................CCCAGCGCGGCCGGGCTGTCTCT............................................... 23 0 6 0.17 1 1 0 0 0
..........................................................................................................................................................................................CACCGCCGGGCTGTCTCTGTCCTCG........................................ 25 2 6 0.17 1 1 0 0 0
......................................................................................................................................................................................ACAGCGCGGCCGGGCTGTCTCTGTCCG.......................................... 27 2 6 0.17 1 1 0 0 0
.........................................................................................................................................................................................GCGCGGCCGGGCTGTCTCTGTCCC.......................................... 24 1 6 0.17 1 1 0 0 0
......................................................................................................................................................................................CCAGCGCGGCCGGGCTGTCTCT............................................... 22 0 6 0.17 1 1 0 0 0
..................................................................................................................................................................................TTGCCCAGCGCGGCCGGGCTGTCT................................................. 24 2 6 0.17 1 1 0 0 0
..................................................................................................................................................................................................GGCTGTCTCTGTCCTCGC....................................... 18 0 6 0.17 1 1 0 0 0
........................................................................................................................................................................................GGCGCGGCCGGGCTGTCTCTGT............................................. 22 1 6 0.17 1 1 0 0 0
.........................................................................................................................................................................................CCGCGGCCGGGCTGTCTCTGTCCT.......................................... 24 1 6 0.17 1 1 0 0 0
..........................................................................................................................................................................................CGCGGCCGGGCTGTCTCTGTCCTCGC....................................... 26 0 6 0.17 1 0 1 0 0
.......................................................................................................................................................................................AAGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 26 1 6 0.17 1 1 0 0 0
......................................................................................................................................................................................CCAGCACCGCCGGGCTGTCTCTGTCC........................................... 26 2 6 0.17 1 1 0 0 0
...................................................................................................................................................................................GGCCCAGCGCGGCCGGGCTGTCT................................................. 23 0 6 0.17 1 0 1 0 0
......................................................................................................................................................................................ACAGCGCGGCCGGGCTGTCT................................................. 20 1 6 0.17 1 1 0 0 0
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCTCTGTC............................................ 23 0 6 0.17 1 1 0 0 0
..................................................................................................................................................................................AGGCCCAGCGCGTCCGGGCTGTCTCT............................................... 26 1 6 0.17 1 1 0 0 0
....................................................................................................................................................................................GCCCAGCGCGGCCGGGCTGTCT................................................. 22 0 6 0.17 1 1 0 0 0
...................................................................................................................................................................................TGCCCAGCGCGGCCGGGCTCTCTCTGT............................................. 27 2 6 0.17 1 0 0 1 0
.......................................................................................................................................................................................CAGCACCGCCGGGCTGTCTCTGTCCT.......................................... 26 2 6 0.17 1 0 1 0 0
...........................................................................................................................................................................................GCGGCCGGGCTGTCTCTGTCC........................................... 21 0 6 0.17 1 1 0 0 0
....................................................................................................................................................................................TCCCAGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 29 1 6 0.17 1 1 0 0 0
.....................................................................................................................................................................................TCCAGCGCGGCCGGGCTGTCTCTGTCC........................................... 27 1 6 0.17 1 1 0 0 0
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCT................................................. 18 0 6 0.17 1 1 0 0 0
.......................................................................................................................................................................................CAGCGCTGCCGGGCTGTCTCTGTCCT.......................................... 26 1 6 0.17 1 1 0 0 0
.....................................................................................................................................................................................CCCAGCGCGGCCGGGCTGTCTCTGTCCT.......................................... 28 0 6 0.17 1 1 0 0 0
...................................................................................................................................................................................GGCCCAGCGCGGCCGGGCTCTCTGT............................................... 25 2 6 0.17 1 1 0 0 0
..................................................................................................................................................................................AGGCCCAACGCGGCCGGGCTGTCTCT............................................... 26 1 6 0.17 1 0 0 0 1
........................................................................................................................................................................................AGCGCGGCCGGGCTGTCTCT............................................... 20 0 6 0.17 1 0 0 1 0
.................................................................................................................................................................................AAGGCCCAGCGCGGCCGGGCTGTCT................................................. 25 0 6 0.17 1 1 0 0 0
.........................................................................................................................................................................................TTGCGGCCGGGCTGTCTCTGTCC........................................... 23 2 6 0.17 1 1 0 0 0
.............................................................................................................................................................................................GGCCGGGCTGTCTCTGTCCTCGC....................................... 23 0 6 0.17 1 1 0 0 0
...........................................................................................................................................................................................GCGGCCGGGCTGTCTCTGTC............................................ 20 0 6 0.17 1 1 0 0 0
...........................................................................................................................................................................................GCGGCCGGGCTGTCTCTGT............................................. 19 0 6 0.17 1 0 1 0 0
................................................................................................................................................................................AAAGGCCCAGCGCGGCCGGTCTGTCT................................................. 26 1 6 0.17 1 1 0 0 0
......................................................................................................................................................................................CCATCGCGGCCGGGCTGTCTCTGTCCT.......................................... 27 1 6 0.17 1 1 0 0 0
...................................................................................................................................................................................GGCCCAGCGCGGCCGGGCTGTCTCTGTC............................................ 28 0 6 0.17 1 1 0 0 0
........................................................................................................................................................................................TGCGCGGCCGGGCTGTCT................................................. 18 1 7 0.14 1 0 1 0 0
..................................................................................................................................................................................TCACCCAGCGCGGCCGGGCTGTCTCTGT............................................. 28 3 7 0.14 1 1 0 0 0
..............................................................................................................................................................GGACCTTTTAGAGATTTAAA......................................................................... 20 0 8 0.13 1 0 1 0 0
............................................................................................................................................................TAGGACCTTTTAGAGATTTAA.......................................................................... 21 1 8 0.13 1 1 0 0 0
...........................................................................................................................................................CGAGGCCCTTTTAGAGATTTAA.......................................................................... 22 1 8 0.13 1 0 1 0 0
............................................................................................................................................................GAGGACCTTTTAGAGATTTA........................................................................... 20 0 8 0.13 1 1 0 0 0
.............................................................................................................................................................AGGACCTTTTAGAGATTTA........................................................................... 19 0 8 0.13 1 1 0 0 0
.............................................................................................................................................................AGGACCTTTTAGAGATTTAA.......................................................................... 20 0 8 0.13 1 1 0 0 0
...........................................................................................................................................................CGATGACCTTTTAGAGATTTAA.......................................................................... 22 1 8 0.13 1 0 0 0 1
..........................................................................................................................................................GCGATGACCTTTTAGAGATTTAA.......................................................................... 23 1 8 0.13 1 1 0 0 0
.......................................................................................................................................................................AGAGATTTAAAAGGCCCAGCGCGGC........................................................... 25 0 8 0.13 1 1 0 0 0
..........................................................................................................................................................GCTAGGACCTTTTAGAGATTTAA.......................................................................... 23 1 8 0.13 1 1 0 0 0
.....................................................................................................................................................................................................................................GTGGTCGTCATCCGTGTCGAGG 22 0 18 0.11 2 2 0 0 0
.......................................................................................................................................................ATACCCAGGACCTTTTAG.................................................................................. 18 2 11 0.09 1 1 0 0 0
....................................................................................................................................................................................................................................AGTGGTCGTCATCCGTGTCGAG. 22 0 18 0.06 1 1 0 0 0
.................................................................................................................................................................................................................................ATGAGTGGTCGTCATCCGTGTCGAGG 26 0 18 0.06 1 1 0 0 0
...................................................................................................................................................................................................................................GAGTGGTCGTCATCCGTGTCGAGG 24 0 18 0.06 1 1 0 0 0
...GTTACGAAGTGCCGGTAT...................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GCATGAGTGGTCGTCATCCGT....... 21 0 20 0.05 1 0 1 0 0
..............................................GGGGATGACGATGGAACA........................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0
................................................................................................................................................................................................................................CATGAGTGGTCGTCATCCGTGTCGA.. 25 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................................GCATGAGTGGTCGTCATCCGTC...... 22 1 20 0.05 1 0 1 0 0
...............................................GGGATGCCGATGGAACAT.......................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_41:238171-238421 + dse_1331 AAGCAATGCTTCACGGCCATACCGCGGGCGGGTCCTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------GTTACCTTGTAAATAGT--------------------T-------------------AAATAGTTAATCCTAAT-----------T----------------------------AT-GTTCGATGAACG-------AATTA-AAAAA----AA----AAAAA--AAA---A--CAC--G--------------------------------------CGGGAAGTCGGGTGCATCGAGTTATCGCTCCTGGAAAATCTC-TAAATTTTCCGGGTCGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------GCCTGTCCCTAACGTACTCACCAG-CAGTAGGCACAG-CTCC
droSim2 3l:23501020-23501263 - TC--------------------------------CTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------TTTACCTTGTAAATAGT--------------------T-------------------AAATAGTTAATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AATTA-A--------AAAAAAAA-----AAA---C--CAC--ACACAGTA----------GTGAGGAGAAAAAGTTGCGTGCGCGAAGTCGGGTGCATCGAGTTGGCGCTCCTGGAAAATCTC-TAAATTTTCCGGGTCGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------GCCTGTCCCTAACGTACTCACCAG-CAGTAGGCACAG-CTCC
dm3 chrX:20904689-20904940 + AAGCAATGCTTCACGGCCATACCGCGGG-GGGTCCTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------TTTACATTGT---------------------------T-AATCT------------------GTTAATCTTAATCTTAA-----------------------------------AT-GTTCAATAGACG-------AATTA-A--------AAAAAAAAAAACCTAA---T--CCT--GTGTAATCAGA-GCA---CTGGGGA--------CGCGCGCGAGTAGCCGGGCGAATCGAGTTAACGCTCCTGGAAAACCCG-AAAATTTTCCGTGTCGCGGCAGCT-------AAAT----AGAGACAGG-AGT----------------GACTGTCTCTAACACAC-------------------------
droEre2 scaffold_4929:22044156-22044502 + AAGCATAGCCTAGCGGTAGTACCGCAGG-GACTCCAGGATC---TACCTTGTTCCCTTTATTCCAAACAACCCGAACCCCTC-CTC---CTCCT--CCCTCCCCAACC-A------CCCGC--------AAACG--TGTATATATTT-------------------GTATATCC----TCAAT-CAACCCAAATA----------------------------AA-ACCTGAT--------TTA-------AAAAA----AA----AAAAAAAAAA---A--CACACACACACCTGGA-GGGCGT----------GGCGCGAAGTGTTCGAAGACGGCTGCATCATGTTGGCGCTCCCGGAAAAACTCCAAAATTTTCCGCGCTGAGTCAGCG-------GGGA----CGCGCCAGG-GTCTGCGGCCTATATCAGCGATGCTGTCCAGTGCACTTACCCG-GTGAGGACATGATCTCC
droYak3 v2_chr3h_random_002:649252-649385 + AAGCAGTGCTTCACGGCCATACCGCGTG-TTGTTCTGGATTG------------------------------------------CCTGCCAAC-TGCT-----------TTTGATTTT----------------------------------T------------------------TTTATT------TATTTTATTTTTATAGTAATGAGCGGAATTAATCAA-ATTAGCC-AA-----ATAA------ACAAA----TA-AAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000410671:380-496 + AAGCAATGCTTCATGGCAGTACCGCAAGC----CCAGCAA---------------------------------------T--TCCCC-CCAC--CCCT-----------G-TAT-ATGTATATGTA--------------------A-------------------AAGTATCTTGTACTAA----------------------AT---T-------------AC----CGTTGAA-----ATAA------AAAAA----AA-A---AAAA--AAA---A--CGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000486487:838-914 + TAT------------------------------------------------------------------------------------------------------------AACCTTGCAGCTATTGTAAAAAT---------------------------------------TATATATAATTATAT----ATAA-----TTAGT---C-------------A---------AAA------AG-AATTA-A--------AAAAAAAA------AT---A--CAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777868:8028-8133 + AAGCAATGCTTCACGGCAGTCCCGCAAGC-----CTGGAT--------------------------------------------------------------------------------------------ATCATATGTATATTT-------------------ATTTATTTTGTC-TATG------TATGTAA-----TTTAT---G-----------------------------------AATAA-AAGAA----AA----AAAAA--AGGGGAA--GTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000451631:8743-8780 + AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----ATAA------AAAAA----AA-A---TT-T--GGAAAAAGTCGC--GTGCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302659:77571-77853 + AAGCATTGCTTTGCGGCCGTACCGCACAA-T--GCGG--------------------------------------GCCCTTGGCCC---CGTCAATGCCTA---G--------TTTGTTGTA-----TAGT------------------ATTT------------------GTTAAGTGTAG-------------------TTAAT---A-------------AA----TAA----------TAA------ACGTA----TA-TAA-------AAA---A--CCCACACACACACCGA-AATTGT-----------GTGTGAAGTCAAGGTGAACGGACGC-CCGCGTGGGTGCTCCGACATAGACT-----------CGTGCTGTGGCAGTGCCCCTTGGGGAAACAAGTGGTAGCAGTACGTAGGATGCAG-TGTGAGGGTAGTCTCCAGACTTACCTG-TCG-AGGCACGA-CTCC
droAna3 scaffold_13339:2092273-2092336 + CTT-----------------------------------------------------------------------------------------------------------TTAGTTTAT-----------AACT------------T-------------------AAATA--TAATTTTAAT-----------T----------------------------AT-TTTATTTTAATT-------AATTA-A--------AAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394928:14644-14774 - AAGCATTGCTTCACGGCCGTACCGCACAA-C--TTAG--------------------------------------GCCCATG-CTC---CTACA--GCCCAGTCGGGGAACAACAATGT--A--------------------------TAGTA------GGCATATAA---GTTAGTTTTAA-------------------TTAAT---A-------------AA----CA-CGAA----TATAA------AAA------AAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_2943:5258-5381 + AAGCAATGCTTTGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACACACTCTT---G--------TCCGTTAAA-----TATA------------------AATTGTAAATATT----AAAG----------AG-------------------CAAAT---A-------------AA----TAA-GTA----TATG-AATA-----------TAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004591:210645-210817 + AAGCAATTCCATG-GGACGTCCCGCAGC-TATCCCCCTATTACGTATCTTGTT--------------------------------GCTGT---TTAA----------------TTTTGC-----------GATT------------TATATAT------GTT----ATATAACT-----------------------------TTC---T-------------AATG--TAA-TAA------AG-AATTTAAAAAA----AA----AAAAC--AAA---A--TAC--A----TA----------------------------------TGAAATGGCT-----------------------------------------------------------------------------------------------------------TCACTTGATTTATCTAATCG-AGAAATT--CCTT
droVir3 scaffold_4734:29-164 + AAGCAATGCTTCGTGGCCGTTCCGCAGG-CAATCCACGCTAC--------------------CTAAACAAT-----------ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTAATTATAAA-----------T----------------------------AA-ACTGAAT--------ACAA------AAA-AATAAAA--------AAAAAA---A--CACACACACACACAAA-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:14004615-14004762 + AAGCAATGCTTTACGGCCGTCCCGCAAGC-ACCGCGCGCTAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGCAATTTTT--------A------TTTTG-------------------TCAAT---A-------------A-----------ATGAATATAA------AAAAA----AA-A---A--AAAAAA---A--CAC--ACACAGTTTC----------------------------------------------------AGCTCTCACTTGCAGACTC-TAATTTTT------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:14117547-14117570 + ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AACAA----AA----AAAAA--AAA---A--CAC--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AAGCAATGCTTCACGGCCATACCGCGGGCGGGTCCTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------GTTACCTTGTAAATAGT--------------------T-------------------AAATAGTTAATCCTAAT-----------T----------------------------AT-GTTCGATGAACG-------AATTA-AAAAA----AA----AAAAA--AAA---A--CAC--G--------------------------------------CGGGAAGTCGGGTGCATCGAGTTATCGCTCCTGGAAAATCTC-TAAATTTTCCGGGTCGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------GCCTGTCCCTAACGTACTCACCAG-CAGTAGGCACAG-CTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCC..........................................................................................2486.505245070
.........TTCACGGCCATACCGCGGGCGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0021010
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGC...........................................................................................2381.881514010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-C...25201.452925022
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCG.........................................................................................2581.381110010
..................................CTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------GTTACC............................................................................................................................................................................................................................................................................................................................................................................2611.0011000
..........TCACGGCCATACCGCGGGCGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
................................................................................................................................................................................TCCTAAT-----------T----------------------------AT-GTTCGATGAACG-------AA........................................................................................................................................................................................................................................2411.0010001
......TGCTTCACGGCCATACCGCGGGCGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTATCGCTCCTGGAAAT...................................................................................................................2611.0010001
........................................................................................................................................................................................................................................................................................................................................GGAAGTCGGGTGCATCGAGTTATCGC.............................................................................................................................2611.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCCTAACGTACTCACCAG-CAGT.............2511.0011000
.........TTCACGGCCATACCGCGGGCGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............................................................................................................................................................................................................................................................................AAA--AAA---A--CAC--G--------------------------------------CGGGAAGT.................................................................................................................................................1911.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTAACGTACTCACCAG-CAGT.............2311.0011000
....................................................................................................................TGTAAATAGT--------------------T-------------------AAATAGTTAATCC............................................................................................................................................................................................................................................................................................................2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCGGC.......................................................................................2760.6744000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCT.........................................................................................2580.6354010
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCG............................................................................................2280.6355000
.............................................................................................................................................................................................................................................................................................................................................................................CTC-TAAATTTTCCGGGTCGCGCC..........................................................................................2380.5044000
.........TTCACGGCCATACCGCGGGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000
.............................................................................................................................................................................................................................................................................................................................................................................CTC-TAAATTTTCCGGGTCGCGC...........................................................................................2280.5044000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-CT..26200.4087010
...............................................................................................................................................................................................................................................................................................................................................................................................CGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------..........................................2660.3320020
....................................................................................................................................................................................................................................................................................................................................................................................................CGGCC-------CGAC----AGAGACAGG-AGC----------------..........................................2160.3321010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-CTC.27180.2855000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-....24200.2552030
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCGT........................................................................................2680.2522000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGC.............................................................................................2180.2521010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACA......23200.2042002
..............................................................................................................................................................................................................................................................................................................................................................................................TCGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------..........................................2760.1711000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCC-------CGAC----.......................................................................2860.1711000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCCGGCC-------...............................................................................2660.1711000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCC-------CGA............................................................................2760.1711000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCGGCC-------...............................................................................2860.1711000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCAG-CAGTAGGCACAG-C...24200.1533000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGT...........................................................................................2380.1311000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCC............................................................................................2280.1310010
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGC...........................................................................................2180.1311000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCC..........................................................................................2280.1311000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCGC........................................................................................2680.1311000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCCGC............................................................................................2290.1111000
.........TTCACGGCCATACCGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1021001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAG-CAGTAGGCACAG-CTC.21180.0610001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCAG-CAGTAGGCACAG-CTC.25180.0611000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-CTCC28180.0611000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCAG-CAGTAGGCACAG-CTCC26180.0611000
.......GCTTCACGGCCATACCGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCAC.......22200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCAG-CAGTAGGCACAG-CA..25200.0511000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAT-....24200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCACCAG-CAGTAGGCACAG-A...24200.0510001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAT-AA..26200.0511000
.........TTCACGGCCATACCGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCA........21200.0511000
droSim2
TC--------------------------------CTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------TTTACCTTGTAAATAGT--------------------T-------------------AAATAGTTAATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AATTA-A--------AAAAAAAA-----AAA---C--CAC--ACACAGTA----------GTGAGGAGAAAAAGTTGCGTGCGCGAAGTCGGGTGCATCGAGTTGGCGCTCCTGGAAAATCTC-TAAATTTTCCGGGTCGCGCCGGCC-------CGAC----AGAGACAGG-AGC----------------GCCTGTCCCTAACGTACTCACCAG-CAGTAGGCACAG-CTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................262123.5024700040018138264911010000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGTTAA...............................................................................................................................................................................................................................................................................................................26149.00490000000232240000000
...............................................................................................................................................................................ATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AA........................................................................................................................................................................................................................................25139.0039000000101037000000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCC..........................................................................................24232.5065002000181916100000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-TAAATT........................................................................................................26216.0032001100148332000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCGCC..........................................................................................27214.0028001100419201000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCCGGC.......................................................................................2528.001600000044260000000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCGGC.......................................................................................2726.501300000017050000000
................................................................................................................................................................................................................................................................................................................................TGCGTGCGCGAAGTCGGGTGCATC.......................................................................................................................................2416.00600100001103000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGTTA................................................................................................................................................................................................................................................................................................................2516.00600000006000000000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGC...........................................................................................2325.501100000054110000000
..................................................................................................................................................................................................................................................................................................................TGAGGAGAAAAAGTTGCGTGCGCGAA...................................................................................................................................................2615.00500000001030100000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCG............................................................................................2525.001000000041203000000
..........................................................................................................................................................................................................................................................................................................................................................................AATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................2524.50900010014021000000
..........................................................................................................................................................................................................................................................................................................................AAAAGTTGCGTGCGCGAAGTCGGG.............................................................................................................................................2414.00400000010002010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGTAGGCACAG-CTCC18134.00520000300000022000000
............................................................................................................................................................................................................................................................................................C--ACACAGTA----------GTGAGGAGAAAAAGTT..............................................................................................................................................................2514.00400000001120000000
...............................................................................................................................................................................ATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AATT......................................................................................................................................................................................................................................2714.00400000040000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGAAAATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................3024.00800000053000000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGTTAAAA.............................................................................................................................................................................................................................................................................................................2813.00300000003000000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCCGGCC-------...............................................................................2623.00600100001112000000
....................................................................................................................................................................................................................................................................................................................................TGCGCGAAGTCGGGTGCATCGAGT...................................................................................................................................2413.00300000000000030000
....................................................................................................................................................................................................................................................................................................................................................................................................CGGCC-------CGAC----AGAGACAGG-AGC----------------GCCTG.....................................2613.00300000000001020000
..........................................................................................................................................................................................................................................................................................CAC--ACACAGTA----------GTGAGGAGAAAAAGT...............................................................................................................................................................2613.00300000001011000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGC.............................................................................................2423.00600000001203000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-TAAAT.........................................................................................................2523.00600000001320000000
..................................................................................................................................................T-------------------AAATAGTTAATCCTTAT-----------T----------------------------AT-GTTCGA.......................................................................................................................................................................................................................................................2713.00300000000010020000
..........................................................................................................................................................................AGTTAATCCTTAT-----------T----------------------------AT-GTTCGATGA....................................................................................................................................................................................................................................................2513.00300000010200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAG-CAGTAGGCACAG-CT..19102.9029000000118550000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAG-CAGTAGGCACAG-CTCC21102.7027000000412280010000
...........................................................................................................................................................................................................................................................................................................................................................................ATCTC-TAAATTTTCCGGGTCGCGCC..........................................................................................2522.50500000000311000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCGT...........................................................................................2622.50500000002120000000
.......................................................................................................................................................................................................................................................................................................................AGAAAAAGTTGCGTGCGCGA....................................................................................................................................................2012.00200000000002000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGG.................................................................................................2022.00400000003100000000
..................................................................................................................................................................................................................................................................................................................TGAGGAGAAAAAGTTGCGTGCGCGA....................................................................................................................................................2512.00200000001001000000
..................................................................................................................................................................................................................................................................................................................TGAGGAGAAAAAGTTGCGTGCGCGAAGT.................................................................................................................................................2812.00200010000100000000
...............................................................................................................................................................................ATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------A.........................................................................................................................................................................................................................................2412.00200000010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GGCC-------CGAC----AGAGACAGG-AGC----------------GCCTG.....................................2512.00200000000001010000
..........................................................................................................................................................................................................................................................................................CAC--ACACAGTA----------GTGAGGAGAAAAAGTT..............................................................................................................................................................2712.00200000000110000000
....................................................................................................................................................................................................................................TCGATGAACG-------AATTA-A--------AAAAAAAA-----AAA---A--.....................................................................................................................................................................................................2812.00200000000110000000
.....................................................................................................................................................................................AT-----------T----------------------------AT-GTTCGATGAACG-------AA........................................................................................................................................................................................................................................1912.00200000000002000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCG..............................................................................................2322.00400000000011020000
..........................................................................................................................................................................................................................................................................AA-----AAA---C--CAC--ACACAGTA----------GTGA..........................................................................................................................................................................2112.00200000000200000000
.........................................................................................................................................................................TAGTTAATCCTTAT-----------T----------------------------AT-GTTCGATGA....................................................................................................................................................................................................................................................2612.00200000000020000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGTTAAA..............................................................................................................................................................................................................................................................................................................2712.00200000000020000000
.........................................................................................................................................................................................................................................................................................................................................................AGTTGGCGCTCCTGGA......................................................................................................................1651.60800000000008000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGT.............................................................................................2421.50300000000011010000
.....................................................................................................................................................................................................................................................................................................................................................ATCGAGTTGGCGCTCCTGGAAAATCTC-..............................................................................................................2721.50300000000003000000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCC-------CGAA----.......................................................................2821.50300000021000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGTAGGCACAG-CT..16131.3117000000000017000000
..................................CTGGAT---------------------------------------T--TGCCCTCC---TT................................................................................................................................................................................................................................................................................................................................................................................................1781.2510000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGTAGGCACAG-C...15141.2117000000000017000000
..................................CTGGAT---------------------------------------T--TGCCCTCC---..................................................................................................................................................................................................................................................................................................................................................................................................15171.1219000000000019000000
..............................................................................................................................................................................................................................................................................................................................................CGGGTGCATCGAGTTGGCGCTCCT.........................................................................................................................2411.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................TCGAGTTGGCGCTCCTGGAAAATCT................................................................................................................2521.00200000000101000000
.....................................................................................................................................................................................AT-----------T----------------------------AT-GTTCGATGAACG-------AATT......................................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGC...........................................................................................2121.00200000010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CGCGCCGGCC-------CGAC----AGAGACAGG-AG...........................................................2511.00100000000000001000
................................................................................................................................................................................TCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AATT......................................................................................................................................................................................................................................2611.00100000010000000000
............................................................................................................................................................................................................................................................................................C--ACACAGTA----------GTGAGGAGAAAAAGTTG.............................................................................................................................................................2611.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................CGCGAAGTCGGGTGCATCGAGTTGG................................................................................................................................2511.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................TGCGCGAAGTCGGGTGCATCGAG....................................................................................................................................2311.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................TGCGCGAAGTCGGGTGCATCGAGTT..................................................................................................................................2511.00100000010000000000
...............................................................................................................................................................................ATCCTTAT-----------T----------------------------AT-GTTCGATGAA...................................................................................................................................................................................................................................................2111.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTACTCACCAG-.................1511.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGAAAATCTC-TAAATTTTCCGGGTCGC.............................................................................................2821.00200000011000000000
...........................................................................................................................................................................GTTAATCCTTAT-----------T----------------------------AT-GTTCGATGAA...................................................................................................................................................................................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................................................................C--ACACAGTA----------GTGAGGAGA.....................................................................................................................................................................1811.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................TCGAGTTGGCGCTCCTGGAAAATCTC-..............................................................................................................2621.00200000010001000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGTTATA..............................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.........................................................................................................................................................................TAGTTAATCCTTAT-----------T----------------------------AT-GTTCGA.......................................................................................................................................................................................................................................................2311.00100000000010000000
............................................................................................................................................................................................................................................................................................................................AAGTTGCGTGCGCGAAGTCGG..............................................................................................................................................2111.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................AAAGTTGCGTGCGCGAAGTC................................................................................................................................................2011.00100000000000010000
..................................................................................................................................................T-------------------AAATAGTTAATCCTTAT-----------T----------------------------AT-GTTCG........................................................................................................................................................................................................................................................2611.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................GCGAAGTCGGGTGCATCGAG....................................................................................................................................2011.00100000000001000000
............................................................................................................................................................................................................................................................................................C--ACACAGTA----------GTGAGGAGAAAAAGT...............................................................................................................................................................2411.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-TAAATTT.......................................................................................................2721.00200000020000000000
...............................................................................................................................................................................ATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AAA.......................................................................................................................................................................................................................................2611.00100000000000010000
.................................................................................................................................................................................................................................................................................................ACAGTA----------GTGAGGAGAAAAAGTTGCA...........................................................................................................................................................2511.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCC-------CGA............................................................................2721.00200000000110000000
.............................................................................................................................................................................TAATCCTTAT-----------T----------------------------AT-GTTCGATGAACG-------AA........................................................................................................................................................................................................................................2711.00100000000010000000
................................................................................................................................................................................................................................................................................................CACAGTA----------GTGAGGAGAAAAAGTTG.............................................................................................................................................................2411.00100000000001000000
............................................................................................................................................................................................................................................................................................................................AAGTTGCGTGCGCGAAGTCGGG.............................................................................................................................................2211.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................CTGGAAAATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................3121.00200000011000000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCCGGCC-------CGA............................................................................2921.00200000011000000000
............................................................................................................................................................................TTAATCCTTAT-----------T----------------------------AT-GTTCGAT......................................................................................................................................................................................................................................................2111.00100000000100000000
...............................................................................................................................................................................................................................................................................................ACACAGTA----------GTGAGGAGAAAAAGTTGCGA..........................................................................................................................................................2811.00100000000010000000
......................................................................................................................................................................................................................................................................................................A----------GTGAGGAGAAAAAGTTGCGTGCGCGA....................................................................................................................................................2711.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................CGGGTGCATCGAGTTGGCGCTCCTGGA......................................................................................................................2711.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................AAAGTTGCGTGCGCGAAGTCGGGTGC..........................................................................................................................................2611.00100000000001000000
......................................................................................................................................................................AAATAGTTAATCCTTAT-----------T----------------------------AT-GTTCGA.......................................................................................................................................................................................................................................................2611.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................AATCTC-TAAATTTTCCGGGTCGCGCC..........................................................................................2621.00200000001010000000
......................................................................................................................................................................................................................................................................................................................................CGCGAAGTCGGGTGCATCGAG....................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................GTTAATCCTTAT-----------T----------------------------AT-GTTCGATG.....................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................................................................................................................................................................................................................................................................A----------GTGAGGAGAAAAAGT...............................................................................................................................................................1611.00100000000001000000
..........................................................................................................................................................................AGTTAATCCTTAT-----------T----------------------------AT-GTTCGATGAA...................................................................................................................................................................................................................................................2611.00100000010000000000
................................................................................................................................................................................................................................T-GTTCGATGAACG-------AATTA-A--------AAAAAAAA-----..............................................................................................................................................................................................................2711.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................TCGAGTTGGCGCTCCTGGA......................................................................................................................1921.00200000000002000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAA......................................................................................................................................................................................................................................................................................................................1911.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCGGCC-------...............................................................................2421.00200010000010000000
..............................................................................................................................................................................................................................................................................................................................................CGGGTGCATCGAGTTGGCGCTCC..........................................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................CCGGCC-------CGAC----AGAGACAGG-AGC----------------GCC.......................................2511.00100000000000010000
........................................................................................................................................................................................................................................TGAACG-------AATTA-A--------AAAAAAAA-----AAA---C--CAC--AC..............................................................................................................................................................................................2911.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GACAGG-AGC----------------GCCTGTCCC.................................1811.00100000000001000000
...........................................................................................................................................................................GTTAATCCTTAT-----------T----------------------------AT-GTT..........................................................................................................................................................................................................................................................1811.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................AAAAAGTTGCGTGCGCGAAGTCGGGA............................................................................................................................................2611.00100000000000010000
...........................................................................................................................................................................................................................................................................................AC--ACACAGTA----------GTGAGGAGAAAAAGT...............................................................................................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................GAGAAAAAGTTGCGTGCGCGA....................................................................................................................................................2111.00100000000100000000
........................................................................................................................................................................................................................................TGAACG-------AATTA-A--------AAAAAAAA-----AAA---C--.....................................................................................................................................................................................................2411.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................C-TAAATTTTCCGGGTCGCGCC..........................................................................................2121.00200100000010000000
................................................................................................................................................................................................................................................................................................................................TGCGTGCGCGAAGTCGGGTG...........................................................................................................................................2011.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................AGTTGCGTGCGCGAAGTCGGG.............................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................TCGGGTGCATCGAGTTGGCGCTCCTG........................................................................................................................2611.00100000000001000000
...........................................................................................................................................................................GTTAATCCTTAT-----------T----------------------------AT-GTTCG........................................................................................................................................................................................................................................................2011.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................GTTGCGTGCGCGAAGTCGGGT............................................................................................................................................2111.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCC..........................................................................................2221.00200000020000000000
...................................................................................................................TTGTAAATAGT--------------------T-------------------AAATAGTTAATCCT...........................................................................................................................................................................................................................................................................................................2611.00100000000100000000
...............................................................................................................TACCTTGTAAATAGT--------------------T-------------------AAATAGT..................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
................................................................................................................................................................................................................................................................................................................................TGCGTGCGCGAAGTCGGGTGCA.........................................................................................................................................2211.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................GTGCGCGAAGTCGGGTGCATC.......................................................................................................................................2111.00100000000001000000
...................................................................................................................................................................................TTAT-----------T----------------------------AT-GTTCGATGAACG-------AA........................................................................................................................................................................................................................................2111.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................CGCGAAGTCGGGTGCATCGA.....................................................................................................................................2011.00100000001000000000
..........................................................................................................................................................................................................................................................................................CAC--ACACAGTA----------GTGAGGAGA.....................................................................................................................................................................2011.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................GCC-------CGAC----AGAGACAGG-AGC----------------GCCTGT....................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCCCTAACGTACTCACCAG-CAGT.............2711.00100100000000000000
....................................................................................................................................................................................................................................TCGATGAACG-------AATTA-A--------AAAAAAAA-----..............................................................................................................................................................................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................................................A---C--CAC--ACACAGTA----------GTGAGGAGAAAA..................................................................................................................................................................2511.00100000000001000000
................................................................................................................................................................................................................................................................................................................................TGCGTGCGCGAAGTCGGGTGCATCGAGT...................................................................................................................................2811.00100000000000010000
................................................................................................................................................................................................................................................................................................................................TGCGTGCGCGAAGTCGGGTGC..........................................................................................................................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................CGGCC-------CGAC----AGAGACAGG-AGC----------------GCA.......................................2411.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................GAAGTCGGGTGCATCGAGTTGGCGC.............................................................................................................................2511.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................TGCGCGAAGTCGGGTGCATCGAGC...................................................................................................................................2411.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................GTCGGGTGCATCGAGTTGGCG..............................................................................................................................2111.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGTAGGCACAG-CTC.17130.69900000000009000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCTCCTGGAAAA...................................................................................................................2620.50100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCGCGCCGG........................................................................................2420.50100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................GTTGGCGCTCCTGGAAAATCTC-TAAATT........................................................................................................2820.50100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................TCTC-TAAATTTTCCGGGTCGCGCCG.........................................................................................2520.50100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGG..................................................................................................1920.50100000000100000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCTCCTGGA......................................................................................................................2320.50100000000001000000
......................................................................................................................................................................................................................................................................................................................................................TCGAGTTGGCGCTCCTGGAAAATCTT-..............................................................................................................2620.50100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTGGCGCTCCTGGAAAATCTC-TAAATT........................................................................................................2720.50100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................CTC-TAAATTTTCCGGGTCGCGCCGGC.......................................................................................2620.50100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................GGAAAATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................2920.50100000001000000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCT............................................................................................................................1720.50100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGCCG.........................................................................................2120.50100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCCGGGTCGCGC...........................................................................................1920.50100000000010000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-TAAA..........................................................................................................2420.50100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCGA...........................................................................................2620.50100000000100000000
.................................................................................................................................................................................................................................................................................................................................................GTGCATCGAGTTGGCGCTCCTGGAA.....................................................................................................................2520.50100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGTT............................................................................................2520.50100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................GGCGCTCCTGGAAAATCTC-TAAATT........................................................................................................2520.50100000010000000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-T.............................................................................................................2120.50100000000100000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCTCCTGGAA.....................................................................................................................2420.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................TTGGCGCTCCTGGAAAATCTC-TAAAT.........................................................................................................2620.50100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGT................................................................................................2120.50100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................TC-TAAATTTTCCGGGTCG..............................................................................................1820.50100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................TTTCCGGGTCGCGCCGGCC-------CGAC----AGA....................................................................2620.50100000000010000000
...................................................................................................................................................................................................................................................................................................................................................GCATCGAGTTGGCGCTCCTGGA......................................................................................................................2220.50100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATCTC-TAAATTTTCCGGGTCGCGC...........................................................................................2420.50100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATCTC-TAAATTTTCCGGGTCGCG............................................................................................2420.50100000000001000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCTCCTGG.......................................................................................................................2220.50100100000000000000
..................................................................................................................................................................................................................................................................................................................................................TGCATCGAGTTGGCGCTCCTGGAAA....................................................................................................................2520.50100000000000010000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATCTC-TAAATA........................................................................................................2620.50100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................ATTTTCCGGGTCGCGC...........................................................................................1650.40200000000002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCAG-CAGTAGGCACAG-CT..2490.33300000000200010000
................................................................................................................................................................................................................................................................................................................................................................GCTCCTGGAAAATCTC-TAAATT........................................................................................................2230.33100000000001000000
..................................CTGGAT---------------------------------------T--TGCCCTCC---T.................................................................................................................................................................................................................................................................................................................................................................................................16130.31400000000004000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTCCGGGTCGCGCCGGCC-------...............................................................................2070.29200000000002000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCACCAG-CAGTAGGCACAG-CTC.2590.22200000000000020000
..................................................................................................................................................................................................................................................................................................................................................................................AAATTTTCCGGGTCGCGC...........................................................................................1850.20100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................AATTTTCCGGGTCGCG............................................................................................1650.20100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATTTTCCGGGTCGCGCCGGCC-------...............................................................................2150.20100000000001000000
........................................................................................................................................................................................................................................................................................................................................................GAGTTGGCGCTCCTGGAAA....................................................................................................................1950.20100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................AAATTTTCCGGGTCGCGCCGGC.......................................................................................2250.20100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................GTTGGCGCTCCTGGAA.....................................................................................................................1650.20100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAG-CAGTAGGCACAG-CTC.20100.20200000000001010000
...................................................................................................................................................................................................................................................................................................................................................................................AATTTTCCGGGTCGCGCC..........................................................................................1850.20100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................GTTGGCGCTCCTGGA......................................................................................................................1550.20100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAG-CAGTAGGCACAG-CTCC23100.20200000000000020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAG-CAGTAGGCACAG-C...18110.18200000000020000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGTA............................................................................................2560.17100000001000000000
............................................................................................................................GT--------------------T-------------------AAATAGTTAATC.............................................................................................................................................................................................................................................................................................................1560.17100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATCTC-TAAATTTTCCGGGTCGCA............................................................................................2560.17100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CAGTAGGCACAG-CTCC17130.15200000000002000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTCACCAG-CAGTAGGCACAG-CT..2670.14100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTTCCGGGTCGCGCCGGCC-------...............................................................................1980.13100000000001000000
..................................CTGGAT---------------------------------------T--TGCCCTCC---TTA...............................................................................................................................................................................................................................................................................................................................................................................................1880.13100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TGGCGCTCCTGGAAAATC.................................................................................................................1880.13100000000001000000
dm3
AAGCAATGCTTCACGGCCATACCGCGGG-GGGTCCTGGAT---------------------------------------T--TGCCCTCC---TTACT-----------TTTACATTGT---------------------------T-AATCT------------------GTTAATCTTAATCTTAA-----------------------------------AT-GTTCAATAGACG-------AATTA-A--------AAAAAAAAAAACCTAA---T--CCT--GTGTAATCAGA-GCA---CTGGGGA--------CGCGCGCGAGTAGCCGGGCGAATCGAGTTAACGCTCCTGGAAAACCCG-AAAATTTTCCGTGTCGCGGCAGCT-------AAAT----AGAGACAGG-AGT----------------GACTGTCTCTAACACAC-------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................TAGCCGGGCGAATCGAGTTAACGC.............................................................................................................................24118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000300000060000200000000000000000000000000000000000000000000000000000000000000000000000000001310000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TAGCCGGGCGAATCGAGTTAACGCT............................................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000003000001020000000200000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................T--CCT--GTGTAATCAGA-GCA---CTGGGGA--------...............................................................................................................................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000100209000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................T--GTGTAATCAGA-GCA---CTGGGGA--------CGCGCG.........................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CA---CTGGGGA--------CGCGCGCGAGTA...................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCACGGCCATACCGCGGG-GGGTCCTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2837.332200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018
............................................................................................................................................................................................................................................................................................................................................................TAACGCTCCTGGAAAACCCG-AAAATT........................................................................................................2617.0070000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TAA---T--CCT--GTGTAATCAGA-GCA---CTGGG.........................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TACCGCGGG-GGGTCCTGGAT---------------------------------------T--TGC..........................................................................................................................................................................................................................................................................................................................................................................................................2494.33390000000000000000000000100000000000001000000000102000000000000000000000000000000000000000000000000000000000000010000100000000000000000001000000000000000000000000000000000000000000000000000010001000000000000010103000400020000000000000000000000000000000000000000000000000000000000000000001000000003000000172000000000000001030000000
............................................................................................................................................................................................................................................................................................................CA---CTGGGGA--------CGCGCGCGAGTAGC.................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000
................................................................................................................................................................................................................................................................................................TGTAATCAGA-GCA---CTGGGGA--------CGCGCG.........................................................................................................................................................2614.0040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-------AAAT----AGAGACAGG-AGT----------------GACT......................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TAGCCGGGCGAATCGAGTTA.................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TAATCAGA-GCA---CTGGGGA--------CGCGCGCGA......................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AACGCTCCTGGAAAACCCG-AAAATTT.......................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
AAGCATAGCCTAGCGGTAGTACCGCAGG-GACTCCAGGATC---TACCTTGTTCCCTTTATTCCAAACAACCCGAACCCCTC-CTC---CTCCT--CCCTCCCCAACC-A------CCCGC--------AAACG--TGTATATATTT-------------------GTATATCC----TCAAT-CAACCCAAATA----------------------------AA-ACCTGAT--------TTA-------AAAAA----AA----AAAAAAAAAA---A--CACACACACACCTGGA-GGGCGT----------GGCGCGAAGTGTTCGAAGACGGCTGCATCATGTTGGCGCTCCCGGAAAAACTCCAAAATTTTCCGCGCTGAGTCAGCG-------GGGA----CGCGCCAGG-GTCTGCGGCCTATATCAGCGATGCTGTCCAGTGCACTTACCCG-GTGAGGACATGATCTCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................TTCCAAACAACCCGAACCCCTC-CTC---......................................................................................................................................................................................................................................................................................................................................................................................................25161.632600000026
................................TCCAGGATC---TACCTTGTTCCCTTTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2650.6033000000
....................ACCGCAGG-GACTCCAGGATC---TACCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................27120.5877000000
..............................................................................................................................................................................................................................................................................AAAAAA---A--CACACACACACCTGGA-G...................................................................................................................................................................................2420.5011000000
.............................GACTCCAGGATC---TACCTTGTTCCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4022000000
...................................................TTCCCTTTATTCCAAACAACCCGAACCC................................................................................................................................................................................................................................................................................................................................................................................................................2890.3332100000
......................CGCAGG-GACTCCAGGATC---TACCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................25120.3344000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCACTTACCCG-GTGAGGACATGAT....27180.3360000006
.............................................................TCCAAACAACCCGAACCCCTC-CTC---C.....................................................................................................................................................................................................................................................................................................................................................................................................25160.2543100000
............................................TACCTTGTTCCCTTTATTCCAAACAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................2880.2522000000
.........................................................................................................................................................................TATCC----TCAAT-CAACCCAAATA----------------------------AA-ACC..........................................................................................................................................................................................................................................................26180.2244000000
................................TCCAGGATC---TACCTTGTTCCCTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2011000000
................................TCCAGGATC---TACCTTGTTCCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2350.2011000000
.............................GACTCCAGGATC---TACCTTGTTCCCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2011000000
...........................G-GACTCCAGGATC---TACCTTGTTCCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2011000000
.......................GCAGG-GACTCCAGGATC---TACCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................24120.1722000000
...................TACCGCAGG-GACTCCAGGATC---TACCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................28120.1722000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTTACCCG-GTGAGGACATGATC...26180.1732000100
................TAGTACCGCAGG-GACTCCAGGATC---T..................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000003
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..........................................................TATTCCAAACAACCCGAACCCCTC-C...........................................................................................................................................................................................................................................................................................................................................................................................................25160.1322000000
.............................................................TCCAAACAACCCGAACCCCTC-CTC---......................................................................................................................................................................................................................................................................................................................................................................................................24160.1322000000
............................................TACCTTGTTCCCTTTATTCCAAACAACCC......................................................................................................................................................................................................................................................................................................................................................................................................................2980.1311000000
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.............................................ACCTTGTTCCCTTTATTCCAAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................2680.1311000000
............................................................TTCCAAACAACCCGAACCCCTC-CTC---C.....................................................................................................................................................................................................................................................................................................................................................................................................26160.1322000000
..................................................GTTCCCTTTATTCCAAACAACCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2490.1111000000
.......................................................CTTTATTCCAAACAACCCGAACCC................................................................................................................................................................................................................................................................................................................................................................................................................2490.1111000000
.......................................................................................................................................................................TATATCC----TCAAT-CAACCCAAATA----------------------------AA-ACC..........................................................................................................................................................................................................................................................28180.1121100000
...................................................TTCCCTTTATTCCAAACAACCCGAACC.................................................................................................................................................................................................................................................................................................................................................................................................................2790.1110000001
....................................................TCCCTTTATTCCAAACAACCCGAACCC................................................................................................................................................................................................................................................................................................................................................................................................................2790.1111000000
....................................................TCCCTTTATTCCAAACAACCCGAACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................2890.1111000000
.................................................TGTTCCCTTTATTCCAAACAACCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2590.1111000000
...................................................TTCCCTTTATTCCAAACAACCCGAAC..................................................................................................................................................................................................................................................................................................................................................................................................................2690.1111000000
...................................................TTCCCTTTATTCCAAACAACCCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................2590.1111000000
................TAGTACCGCAGG-GACTCCAGGATC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1022000000
..........TAGCGGTAGTACCGCAGG-GACTCCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1021000010
...................TACCGCAGG-GACTCCAGGATC---TACCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................26120.0811000000
....................ACCGCAGG-GACTCCAGGATC---TACCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................25120.0810100000
..............................................................................................................................................................................................................................................................................................................................................................................TCCAAAATTTTCCGCGCTGAGTCAGC.......................................................................................26130.0811000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGCGCTGAGTCAGCG-------GGGA----CGC....................................................................22130.0811000000
................TAGTACCGCAGG-GACTCCAGGATC---TAC................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0811000000
...................TACCGCAGG-GACTCCAGGATC---TACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................25130.0811000000
................................................................................TC-CTC---CTCCT--CCCTCCCCAACC-A------CCCGC--------A.............................................................................................................................................................................................................................................................................................................................................................29140.0711000000
...................................................................................................TCCCCAACC-A------CCCGC--------AAACG--TGTATA.................................................................................................................................................................................................................................................................................................................................................26140.0711000000
....................................................................................TC---CTCCT--CCCTCCCCAACC-A------CCCGC--------A.............................................................................................................................................................................................................................................................................................................................................................26140.0711000000
....................................................................................TC---CTCCT--CCCTCCCCAACC-A------CCCGC--------..............................................................................................................................................................................................................................................................................................................................................................25140.0711000000
.................................................................AACAACCCGAACCCCTC-CTC---CTCCT--CCC............................................................................................................................................................................................................................................................................................................................................................................................28160.0611000000
.........................................................TTATTCCAAACAACCCGAACCCCTC-............................................................................................................................................................................................................................................................................................................................................................................................................25160.0611000000
.....................................................................................................................................................................................AT-CAACCCAAATA----------------------------AA-ACCTGAT--------TT............................................................................................................................................................................................................................................24160.0611000000
...........................................................ATTCCAAACAACCCGAACCCCTC-CTC---C.....................................................................................................................................................................................................................................................................................................................................................................................................27160.0611000000
...............................................................CAAACAACCCGAACCCCTC-CTC---C.....................................................................................................................................................................................................................................................................................................................................................................................................23160.0611000000
.....................................................................................................................................................................................AT-CAACCCAAATA----------------------------AA-ACCTGAT--------TTA-------....................................................................................................................................................................................................................................25160.0611000000
.........................................................TTATTCCAAACAACCCGAACCCCTC-CTC---......................................................................................................................................................................................................................................................................................................................................................................................................28160.0611000000
.........................................................TTATTCCAAACAACCCGAACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................23160.0610100000
............................................................................................................................................................................CC----TCAAT-CAACCCAAATA----------------------------AA-ACCTGA.......................................................................................................................................................................................................................................................26180.0611000000
............................................................................................................................................................................CC----TCAAT-CAACCCAAATA----------------------------AA-ACCTGAT--------..............................................................................................................................................................................................................................................27180.0611000000
...........................................................................................................................................................................TCC----TCAAT-CAACCCAAATA----------------------------AA-ACCTGAT--------..............................................................................................................................................................................................................................................28180.0611000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCACTTACCCG-GTGAGGACATG......25180.0611000000
....................................................................................................................................................................................AAT-CAACCCAAATA----------------------------AA-ACCTGAT--------T.............................................................................................................................................................................................................................................24180.0611000000
.........................................................TTATTCCAAACAACCCGAACCC................................................................................................................................................................................................................................................................................................................................................................................................................22180.0610100000
.....................................................................................................................................................................................AT-CAACCCAAATA----------------------------AA-ACCTGAT--------..............................................................................................................................................................................................................................................22190.0511000000
........................................................................................................................................................................................................................................................................................................................................................................AAAAACTCCAAAATTTTCCGCGC................................................................................................23190.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCCG-GTGAGGACATGATC...21190.0511000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTACCCG-GTGAGGACATGATC...25190.0511000000
..................................................................................................................................................T-------------------GTATATCC----TCAAT-CAACCCAAATA----------------------------AA-.............................................................................................................................................................................................................................................................27190.0511000000
....................................................................................................................................................................................AAT-CAACCCAAATA----------------------------AA-ACCTGAT--------..............................................................................................................................................................................................................................................23190.0511000000
....................................................................................................................................................................................................................................................................................................................................TGTTCGAAGACGGCTGCATCATG....................................................................................................................................23200.0511000000
............GCGGTAGTACCGCAGG-GACTCCAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
.AGCATAGCCTAGCGGTAGTACCGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
.....TAGCCTAGCGGTAGTACCGCAGG-GAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000000
........................................................................................................................................................................................................................................................................................................................................CGAAGACGGCTGCATCATGTTGG................................................................................................................................23200.0511000000
.................................................................................................................................................................................................................................................TTA-------AAAAA----AA----AAAAAAAAAA---........................................................................................................................................................................................................20200.0511000000
......................................................................................................................................................................................................................................................................................................................................TTCGAAGACGGCTGCATCATGTTGGCGC.............................................................................................................................28200.0511000000
.........................................................................................................................................................................................................................................................................................................................................GAAGACGGCTGCATCATGTTGGC...............................................................................................................................23200.0511000000
droYak3
AAGCAGTGCTTCACGGCCATACCGCGTG-TTGTTCTGGATTG------------------------------------------CCTGCCAAC-TGCT-----------TTTGATTTT----------------------------------T------------------------TTTATT------TATTTTATTTTTATAGTAATGAGCGGAATTAATCAA-ATTAGCC-AA-----ATAA------ACAAA----TA-AAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droTak1
AAGCAATGCTTCATGGCAGTACCGCAAGC----CCAGCAA---------------------------------------T--TCCCC-CCAC--CCCT-----------G-TAT-ATGTATATGTA--------------------A-------------------AAGTATCTTGTACTAA----------------------AT---T-------------AC----CGTTGAA-----ATAA------AAAAA----AA-A---AAAA--AAA---A--CGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAT------------------------------------------------------------------------------------------------------------AACCTTGCAGCTATTGTAAAAAT---------------------------------------TATATATAATTATAT----ATAA-----TTAGT---C-------------A---------AAA------AG-AATTA-A--------AAAAAAAA------AT---A--CAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGCAATGCTTCACGGCAGTCCCGCAAGC-----CTGGAT--------------------------------------------------------------------------------------------ATCATATGTATATTT-------------------ATTTATTTTGTC-TATG------TATGTAA-----TTTAT---G-----------------------------------AATAA-AAGAA----AA----AAAAA--AGGGGAA--GTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----ATAA------AAAAA----AA-A---TT-T--GGAAAAAGTCGC--GTGCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAGCATTGCTTTGCGGCCGTACCGCACAA-T--GCGG--------------------------------------GCCCTTGGCCC---CGTCAATGCCTA---G--------TTTGTTGTA-----TAGT------------------ATTT------------------GTTAAGTGTAG-------------------TTAAT---A-------------AA----TAA----------TAA------ACGTA----TA-TAA-------AAA---A--CCCACACACACACCGA-AATTGT-----------GTGTGAAGTCAAGGTGAACGGACGC-CCGCGTGGGTGCTCCGACATAGACT-----------CGTGCTGTGGCAGTGCCCCTTGGGGAAACAAGTGGTAGCAGTACGTAGGATGCAG-TGTGAGGGTAGTCTCCAGACTTACCTG-TCG-AGGCACGA-CTCCSizeHit CountTotal NormTotal
No Reads
droAna3
CTT-----------------------------------------------------------------------------------------------------------TTAGTTTAT-----------AACT------------T-------------------AAATA--TAATTTTAAT-----------T----------------------------AT-TTTATTTTAATT-------AATTA-A--------AAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAGCATTGCTTCACGGCCGTACCGCACAA-C--TTAG--------------------------------------GCCCATG-CTC---CTACA--GCCCAGTCGGGGAACAACAATGT--A--------------------------TAGTA------GGCATATAA---GTTAGTTTTAA-------------------TTAAT---A-------------AA----CA-CGAA----TATAA------AAA------AAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AAGCAATGCTTTGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACACACTCTT---G--------TCCGTTAAA-----TATA------------------AATTGTAAATATT----AAAG----------AG-------------------CAAAT---A-------------AA----TAA-GTA----TATG-AATA-----------TAAAAAAA------A-----------------------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................2472.862001910000000
...........................TC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACAC................................................................................................................................................................................................................................................................................................................................................................................................2531.0030210000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................2570.8660600000000
...........................TC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACACA...............................................................................................................................................................................................................................................................................................................................................................................................2630.3310100000000
...........................TC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACA.................................................................................................................................................................................................................................................................................................................................................................................................2460.3320200000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------GA..................................................................................................................................................................................................................................................................................................................................................................................................................2670.2920200000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--........................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.2920200000000
.........TTTGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................2770.2920200000000
..............................................................................CCTAGTCC---CAACACACTCTT---G--------TCC...........................................................................................................................................................................................................................................................................................................................................................................2440.2510100000000
...........................................................................................................................................................................................................................................A----TATG-AATA-----------TAAAAAAA------A-----------------------A....................................................................................................................................................................................1950.2010100000000
...........................TC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAAC..................................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
...........................TC-C--GCGG--G-----------------------------------GCCCCTAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................1860.1710100000000
.......................GCAGTC-C--GCGG--G-----------------------------------GCCCCTAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................2260.1710100000000
...................TACCGCAGTC-C--GCGG--G-----------------------------------GCCCCTAG............................................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
.........................................................................................................................................................................G----------AG-------------------CAAAT---A-------------AA----TAA-GTA----TATG-A.........................................................................................................................................................................................................................................2260.1710100000000
......................CGCAGTC-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAA...................................................................................................................................................................................................................................................................................................................................................................................................2760.1710100000000
............GCGGCAGTACCGCAGTC-C--GCGG--........................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
............GCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GCGA--........................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------T...................................................................................................................................................................................................................................................................................................................................................................................................................2570.1410100000000
............GCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
................CAGTACCGCAGTC-C--GCGG--G-----------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GCGC--........................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
............GCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................2570.1410100000000
............................C-C--GCGG--G-----------------------------------GCCCCTAGTCC---CAACA.................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------TAA.................................................................................................................................................................................................................................................................................................................................................................................................................2770.1410100000000
..........TTGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
...........TGCGGCAGTACCGCAGTC-C--GCGG--G-----------------------------------TA..................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
.......GCTTTGCGGCAGTACCGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310100000000
..GCAATGCTTTGCGGCAGTACCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310100000000
..GCAATGCTTTGCGGCAGTACCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.1010100000000
droWil2
AAGCAATTCCATG-GGACGTCCCGCAGC-TATCCCCCTATTACGTATCTTGTT--------------------------------GCTGT---TTAA----------------TTTTGC-----------GATT------------TATATAT------GTT----ATATAACT-----------------------------TTC---T-------------AATG--TAA-TAA------AG-AATTTAAAAAA----AA----AAAAC--AAA---A--TAC--A----TA----------------------------------TGAAATGGCT-----------------------------------------------------------------------------------------------------------TCACTTGATTTATCTAATCG-AGAAATT--CCTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................ATCCCCCTATTACGTATCTTGTT--------------------------------G.........................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..........................................................................................................................................................................................................................................................................................TAC--A----TA----------------------------------TGAAATGGCT-----------------------------------------------------------------------------------------------------------TCACTTGATT........................2611.00100010
droVir3
AAGCAATGCTTCGTGGCCGTTCCGCAGG-CAATCCACGCTAC--------------------CTAAACAAT-----------ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTAATTATAAA-----------T----------------------------AA-ACTGAAT--------ACAA------AAA-AATAAAA--------AAAAAA---A--CACACACACACACAAA-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AA.......................................................................................................................................................................................................................................................................................................................23203.907800101000000000000000000096241602023080006000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------A........................................................................................................................................................................................................................................................................................................................22201.953900300000001000000000000000000000001301084000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAT.....................................................................................................................................................................................................................................................................................................................25201.8036007000100000000000000000000020008038160000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------.........................................................................................................................................................................................................................................................................................................................21201.5531002010100000000000000000107600000032233000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATA....................................................................................................................................................................................................................................................................................................................26201.0020000000000000000000000000007500000007001000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAA......................................................................................................................................................................................................................................................................................................................24201.0020000010000000000000000000200601000004330000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAA...................................................................................................................................................................................................................................................................................................................27200.8016000000000000000000000000038100000000130000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAAC..................................................................................................................................................................................................................................................................................................................28200.7014000000000000000000000000000500000090000000000000000000000000000
.AGCAATGCTTCGTGGCCGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.603000000000000000000000000020000000010000000000000000000000000000
AAGCAATGCTTCGTGGCCGTTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.402000000000000000000000000000000000000000000000000000000000000002
..GCAATGCTTCGTGGCCGTTCCGCAGG-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.402002000000000000000000000000000000000000000000000000000000000000
.AGCAATGCTTCGTGGCCGTTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.402000000000000000000000000020000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACC.................................................................................................................................................................................................................................................................................................................29200.408006000000000000000000000000001100000000000000000000000000000000
..................................................................................................................................................................................................................................ACTGAAT--------ACAA------AAA-AATAAAA--------AAAAAA---........................................................................................................................................................................................................2730.331000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................ACTGAAT--------ACAA------AAA-AATAAAA--------AAAAAA---C--.....................................................................................................................................................................................................2840.251000000000000000000000000001000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACT.................................................................................................................................................................................................................................................................................................................29200.255004000000000000000000000010000000000000000000000000000000000000
AAGCAATGCTTCGTGGCCGTTCCGCAGG-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201000000000000000000000000000000000000000000000000000000000000001
.AGCAATGCTTCGTGGCCGTTCCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201001000000000000000000000000000000000000000000000000000000000000
AAGCAATGCTTCGTGGCCGTTCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201000000001000000000000000000000000000000000000000000000000000000
....AATGCTTCGTGGCCGTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201000000000000000000000000000000000000001000000000000000000000000
..GCAATGCTTCGTGGCCGTTCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201000010000000000000000000000000000000000000000000000000000000000
...CAATGCTTCGTGGCCGTTCCGCAGG-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201000000000000000000000000000000000000000000000000000000000000001
...................................................................................CCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAAC..................................................................................................................................................................................................................................................................................................................27200.204002000000000000000000000002000000000000000000000000000000000000
.AGCAATGCTTCGTGGCCGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.171000000000000000000000000010000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AATG.....................................................................................................................................................................................................................................................................................................................25200.153002000000000000000000000000100000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAAA..................................................................................................................................................................................................................................................................................................................28200.153000000000000000000000000000000000012000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AATA.....................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000101000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAT......................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000200000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATT....................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000100001000000000000000000000000000000
.....................................................................................C---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTA................................................................................................................................................................................................................................................................................................................27200.102002000000000000000000000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AATC.....................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000000002000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAAT....................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAT...................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
...................................................................................CCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACCC................................................................................................................................................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................C---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACT.................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
................................TCCACGCTAC--------------------CTAAACAAT-----------.............................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAA.....................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................AACT-A------TAACCTAAGC--------------------T-------------------AA.......................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATGT...................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................C---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAA......................................................................................................................................................................................................................................................................................................................21200.051000000000000000000010000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------C........................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
......................................CTAC--------------------CTAAACAAT-----------ACCC---C--------------AACT-A------TAACC......................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATTT...................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
....................................................................................CC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAA...................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
................................TCCACGCTAC--------------------CTAAACAAT-----------ACC..........................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TAACCTAAGC--------------------T-------------------AAATAAC..................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................C---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAA...................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................CC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAT.....................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000001000000000000000000000000000
...................................................................................CCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAA......................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAC.....................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATTTT..................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AATAT....................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................TAACCTAAGC--------------------T-------------------AAATAACTAA...............................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
...................................................................................CCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTA................................................................................................................................................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
........................................AC--------------------CTAAACAAT-----------ACCC---C--------------AACT-A------TA.........................................................................................................................................................................................................................................................................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
.........................................................................................C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTA................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................AAT-----------ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAAT.....................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000001000000000000000000000000000
.......................................TAC--------------------CTAAACAAT-----------ACCC---C--------------AACT-..................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------TC.......................................................................................................................................................................................................................................................................................................................23200.051000000100000000000000000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AG.......................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAAT..................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................CC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAACTAA...............................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATATA..................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................A------TAACCTAAGC--------------------T-------------------AAATAACT.................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AT.......................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................AACCTAAGC--------------------T-------------------AAATAACC.................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................CC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AAATAAC..................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------ATT......................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
........................................AC--------------------CTAAACAAT-----------ACCC---C--------------AACT-A------TAACC......................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------AC.......................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------ATTA.....................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................AAT-----------ACCC---C--------------AACT-A------TAACCTAAGC--------------------T-------------------A........................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
AAGCAATGCTTTACGGCCGTCCCGCAAGC-ACCGCGCGCTAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGCAATTTTT--------A------TTTTG-------------------TCAAT---A-------------A-----------ATGAATATAA------AAAAA----AA-A---A--AAAAAA---A--CAC--ACACAGTTTC----------------------------------------------------AGCTCTCACTTGCAGACTC-TAATTTTT------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...CAATGCTTTACGGCCGTCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20202.70545400000
....AATGCTTTACGGCCGTCCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.65333300000
....AATGCTTTACGGCCGTCCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.255500000
..................................................................................................................A--------------CA------------------ACTTGCAATTTTT--------A------TTTTG-------------------TC....................................................................................................................................................................................................................................................................................24200.153200010
.....ATGCTTTACGGCCGTCCCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
.........................................T------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGCAATT................................................................................................................................................................................................................................................................................................................................26200.153300000
......................................CTAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGC....................................................................................................................................................................................................................................................................................................................................25200.102200000
.....ATGCTTTACGGCCGTCCCGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
.......................................TAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGC....................................................................................................................................................................................................................................................................................................................................24200.102200000
..................................................................................................................A--------------CA------------------ACTTGCAATTTTT--------A------TTTTG-------------------TCAA..................................................................................................................................................................................................................................................................................26200.102200000
............................C-ACCGCGCGCTAT------------------------------------CCTAG-------------CC-----------ACC...............................................................................................................................................................................................................................................................................................................................................................................23200.102000020
.........................................T------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTG.....................................................................................................................................................................................................................................................................................................................................21200.102200000
................................................................................................CC-----------ACCACA--------------CA------------------ACTTGCAATTTTT--------A------..............................................................................................................................................................................................................................................................................................................24200.051000010
................................................................................TAG-------------CC-----------ACCACA--------------CA------------------ACTTGCAA..................................................................................................................................................................................................................................................................................................................................21200.051000010
.......................................TAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTT......................................................................................................................................................................................................................................................................................................................................22200.051100000
................................................................................................CC-----------ACCACA--------------CA------------------ACTTGCAATTTTT--------A------TTT...........................................................................................................................................................................................................................................................................................................27200.051100000
AAGCAATGCTTTACGGCCGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
..............................ACCGCGCGCTAT------------------------------------CCTAG-------------CC-----------AGT...............................................................................................................................................................................................................................................................................................................................................................................22200.051000010
........................................AT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------AC........................................................................................................................................................................................................................................................................................................................................19200.051000010
......TGCTTTACGGCCGTCCCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..GCAATGCTTTACGGCCGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
....................CCCGCAAGC-ACCGCGCGCTAT------------------------------------C................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.................................................................................................C-----------ACCACA--------------CA------------------ACTTGCAATTTT..............................................................................................................................................................................................................................................................................................................................21200.051100000
......................................CTAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTG.....................................................................................................................................................................................................................................................................................................................................24200.051100000
................................................................................................CC-----------ACCACA--------------CA------------------ACTTGCAATTTTT--------.....................................................................................................................................................................................................................................................................................................................23200.051100000
.......................................TAT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTG.....................................................................................................................................................................................................................................................................................................................................23200.051100000
..............................ACCGCGCGCTAT------------------------------------CCTAG-------------CC-----------ACCA..............................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...CAATGCTTTACGGCCGTCCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................AT------------------------------------CCTAG-------------CC-----------ACCACA--------------CA------------------ACTTGCAATTTT..............................................................................................................................................................................................................................................................................................................................29200.051100000
droGri2
ATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-AACAA----AA----AAAAA--AAA---A--CAC--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:46 PM