ID:

dse_1303

 Coordinate:

scaffold_4:4774906-4775056 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dsec_GLEANR_13233:8]; CDS [Dsec\GM12862-cds]; intron [Dsec\GM12862-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGTAAAGGATTCTGCTCGCTGTTTGCCGACGATGGACGAGGTCTGACAAGTAAGTACCACTATAGCCTTCTATAAATACAAAGAAATGTTACGGAGATCTCTATCTTTACTCGGTGGTTTTCATTTCCTAATTAAAGAGCTGCTCAGTTAGATACTGTTTAAATAGTTAATGCAACGTAATCACTTATGAGTATGCTCTTATCAAGAGCTGCACTATATCTCATATTAGTAAGTCAGCAGTTAAACGATA
**************************************************...........(((((....)))))........((((((((((.(((.............))).))))....)))))).......((((((((((((....((((((((((((....)))).)))..)).))).....)))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 M054
female body
 V115
head
................TCGCTGTTTGCCGACGATGGACGAG.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...........................CGACGATGGACGAGGTCTGAC........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..GTAAAGGATTCTGCTCGCTG..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
...........................CGACGATGGACGAGGTCTGACA.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
.......................TTGCCGACGATGGACGAGGTCTGACA.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
.......................................................................................................ATCTTTACTCGGTGGCTTTCATTTCCT......................................................................................................................... 27 1 1 1.00 1 1 0 0 0
...............................GATGGACGAGGTCTGACAAGTAAG.................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
......................TTTGCCGACGATGGACGAGGTCTGAC........................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
.AGTAAAGGATTCTGCTCGCTGTTTGCC............................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
............................GACGATGGACGAGGTCTGAC........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.........................GCCGACGATGGACGAGGT................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
...........TCTGCTCGCTGTTTGCCGACGATGGAC..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
..............GCTCGCTGTTTGCCGACGATGGAC..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
........................TGCCGACGATGGACGGGGT................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0
..............GCTCGCTGTTTGCCGACGATGGACGAG.................................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0
..GTAAAGGATTCTGCTCGCT...................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..GTAAAGGATTCTGCTCGCTGTTTGCC............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
...............................GATGGACGAGGTCTGACA.......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
.................CGCTGTTTGCCGACGATGGGCGAGGTC............................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 1
.........................................................................................................................................GAGCTGATCAGGTAGATA................................................................................................ 18 2 4 0.25 1 0 0 1 0
........................................................................................................................................AGAGATGATCAGGTAGATA................................................................................................ 19 3 20 0.25 5 0 0 5 0
................................................................................AAAGAAATGTTGGTGAGATC....................................................................................................................................................... 20 3 12 0.08 1 0 1 0 0

Anti-sense strand reads

CTCATTTCCTAAGACGAGCGACAAACGGCTGCTACCTGCTCCAGACTGTTCATTCATGGTGATATCGGAAGATATTTATGTTTCTTTACAATGCCTCTAGAGATAGAAATGAGCCACCAAAAGTAAAGGATTAATTTCTCGACGAGTCAATCTATGACAAATTTATCAATTACGTTGCATTAGTGAATACTCATACGAGAATAGTTCTCGACGTGATATAGAGTATAATCATTCAGTCGTCAATTTGCTAT
**************************************************...........(((((....)))))........((((((((((.(((.............))).))))....)))))).......((((((((((((....((((((((((((....)))).)))..)).))).....)))))).))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113
male body		 V114
embryo
 V115
head
.....................................................................................TTACAATGCCTCTAGAGATAGA................................................................................................................................................ 22 0 1 1.00 1 1 0 0
........................................................................................................AGGAATGTGGCACCAAAAGTA.............................................................................................................................. 21 3 4 0.25 1 1 0 0
...........................................................................................................................................CGACGAGTCAATCTATACCTA........................................................................................... 21 3 5 0.20 1 1 0 0
.........................................................................................................................................................................................................TGGTTCTCGACGTGATCT................................ 18 2 6 0.17 1 0 1 0
............................................................................................................................................GACGAGTCAACCTGTGATA............................................................................................ 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_4:4774856-4775106 + dse_1303 GAGTAAAGGATTCTGCTCGCTGTTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCAC-------TATAGCCT---------TCTAT----A--AATACAAAGAAATGTTACGGAGATCTCTATCT----------------T--T-A-------------------------------------------------------------------------------------------------------------------------------CTCGGTG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTCAGT-------TA-G---------------ATACTGTTTAAATAGT--------------TAATGCAACGTAATCACT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------ATATTAGTAAG-TCAGCAG--TT-A------AACGATA
droSim2 3r:25275601-25275861 + dsi_28081 GAGTAAAGGATTCTGCTCGCTGTTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCAC-------TATAACCT---------TCTAT----A--AATACAAGGAAATGTTGCGGAGATCTCTATCT----------------TCTCT----------------------------------------------------------------------------ATCATGCA--------------------------------------------CTCGGTG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTCAGT-------TA-G---------------ATACTGTTTAAATGGT--------------TAATGCAACGTAATCACT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------ATATTAGTAAG-TCAGCAG--TT-A------AACGATA
dm3 chr3R:25930482-25930784 + GAGTAAAGGATTCTGTTCGCTATTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCACCCT---CCTTCTTCTTTCTT----TCTAG----A--AACACAAGGAAATGTTACGGAGATCTCTATCT----------------T--TTACCTTTCACAAAC-----------------------------------------------------------------------------------TCTCAAGAATTCACGTACTATGCATTTGAGCACTCTACG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTAAGT-------TA-G---------------ATACTGTATAAATAGT--------------TATGGCAACGTAATCATT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAA---GCTACACTATA-T------CTT--------------------------------------------------------ATATTAGTAAG-TCAGTAG--TT-A------AACGATA
droEre2 scaffold_4820:2069822-2070093 - GAGTAAAGGATTCTGCTCGCTGTTCGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACTACTTT---CTACTT-----------TTTTAT----A--AATACGAGGAAGTGTTACGGAGATCTCGATCT----------------T--TT----------------------------------------------------------------------------ATCATGCA---------C--CCCCAAGAAT------------------------------------GCATTTCCCAACCT----GAATGCT-GCTCAGT-------TGCGATATCTTTCGAACGTATACTACTTAAATAGT--------------TAATGCAACATAATCA-----------------------G-----CGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTAGA-T------CTC--------------------------------------------------------GCATTAGTAAG-TCAGCAT--TT-A------AGTGATT
droYak3 3R:26861301-26861563 + GAGTAAAGGATTCTGCTCGCTGTTTGCTGACGATGGACGAGGTCTGA---CAAGTAAGTATCTAT-----CCA--TCTTT-TG----TTTTAT---AA--AATACAAGGAAGTGTTACAGAGATCTCTTTAT----------------CTTTT----------------------------------------------------------------------------ATCATGCA---------C--TCTCAACAGT------------------------------------TCATTTCCTAACCC----AAATGCT-GACAAGT-------TAAGATA--------------ACTACTTGAATAGT--------------TACTGCAATGTAATCA-----------------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------GTATTAGTAAC--TGGCAT--TTGA------AACGATT
droEug1 scf7180000409555:413126-413303 + GAATAAAGGATTCTGCTCGCTGTTTGCCGATGATGGACGAGGTCTGA---CAAGTAAGTAGAAGAAT---CTATATCTTT---------CTTT-----------TTGAGTTACGGAATAGAAATCTCTATCA----------------T--T---------------------------------------------------GGAAAATTGGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------CTCTATAATAATCAAGGGCCTC--T---TTTCTAA----------------------------T---CAA-------------------------------------------------------------------------------------------GCTAAGCAT--TTCT------ATTGATA
droBia1 scf7180000302113:1458609-1458714 - GAATAAGGGATTCTGCTCGCTCTTCGCCGACGATGGACGAGGTCTGA---CAAGTAAGTAGTCGCAT---TTTGTTT-----------TGTAT----A--A---GTAGGGTGTGACCCAGAAATCTCTATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415765:353853-354251 + GAATAAAGGATTCTGTTCGCTCTTTGCTGACGATGGACGAGGTCTGA---CAAGTAAGTAAAAGAAT---CTTTATCATTATATCTT-TAA-----------------------ATACAGAAATCTCTATCT----------------CTTTT----------------------------------------------------------------------------ATGA---AAAGTTTGAAATTTCCAAAGAATTCGCGTAGTAATCACTTAAGCAGTATATATATTTTATCATTTCCTAA--------AGAATTCGCGTAGTATCCAGTAA-T---------------TGGCTTTTTAAATTCTTTAAAAAAATCGTATAATAAAATGTAATCAATATTTTATCTCTCTCAAAATCAAAATTCTCTAT---TTTCTAA----------------------------T---CAACAAAATGCATTATAATCTAGTGCTCATATTCAACTAAATATATGGCCAAGAGGCTTTTAAA--------AATAAAACTGCAGCGATAGCAAGTTAAGCAT--TTCG------ATTGATA
droEle1 scf7180000491280:2217149-2217443 + GAATAAAGGATTCTGTTCGCTGTTCGCTGACGATGGAAGAGGTCTGA---CAAGTAAGTAGAAAACG---TTTGATCTTTATATCCC-AAAGTATTAATCGATAA--CAGGGTAACACAGAAATCTCTAGTAGTCAGTTAAACAATCTT---TACTTGATATAAAT-----------------------------------------------------------------------------------TTTTAAAAATATA----------------------------------------------------------------------------TAAA--------------AATGAATAAGT----------------------------ACTCAATATATTATACAT---------AA-----ACTTC---ACTCTGA----------------------------T---CATGA-A------------------ATTAAATTCCACGAAATA--------------TTTTAAA-ACAACTAAACAAGATTTCCGCGATAGCAATATTAGCAT--TTCG------ATTGATA
droRho1 scf7180000779336:31680-31995 - GAATAAAGGATTCTGTTCGCTGTT---CGATGATGGAAGAAGTCTGACGACAAGTAAGTAGAAAAAG---CTATAACATTATGTTCC-TG-------ATTTCTAA--CAGGGTGTTACTGAAATCTCTGCCA----------------A--TCACTTGGTTTAAAATATCATGAAGATATCCTAATTGTAACGATATTTCATTGG-----------------------------AAA---------T--TCTT------------------------------------------------------------------------------------------------------TACTGTTTAGG------------------------------------------------------------------------ATCTTACTCTAAAGCTCTAGCTCTTATATCATTATCATGAAGAGTATACATTACAATCTAAT------------CC-------------AAAGG-TTTTATAATTAATTAACAAAGATTACCGCTATAGCACAATTAGCAT--TTTG------ATTGATA
droFic1 scf7180000454073:3410206-3410495 - GAATAAGGGATTCTGCTCGCTCTTCGCCGACGATGGACGAGGTTTGA---CAAGTAAGTAGAAACCC---CTAGAA-----------TAAAGT--TAA--GATTA--AAGGGTGTAGCAGAAATCTTACAAAT---------------T--C-A-----------------------------------ATCC--------CTAATCCCCTAGAAAAACTTATATTT---AG--------------------------------------------------------------------ATCTAATTT----GACTGCA-TCT------------AAAATA--------------ACTCTTGCAATATC--------------AGCTCTATTTCAATCG-----------------------G-----AAATATCACTTCCAA----------------------------T---CATTA-G---CATT--------AT------------CT-------------ATTCG-TTTTGAATATAATCAGCAGTGATTTTCGCGATAGCAC---TGCCAC--TTCG------ATTGATA
droKik1 scf7180000302261:377339-377594 + GAATAAAGGATTCTGTTCGCTGTTTGCTGACGATGGACGAGGCTTAA---CAAGTAAGTAGAATATTTCCCTACAAATT---------TCTTA----T--AACTC--AGGGGTGCTTCAAAGATCTAAAAAAT---------------T--C-A-----------------------------------ATAG--------ATGGGGAACTAAAAAAATGTATACATTTCTGATTAA---------T--TTACAACAAT------------------------------------GTCTTTACAAAAACAATTGACTGAT-GTT------------AA--TA--------------ATCCTTATACTAGC--------------TTTATCAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAAA-TCAATAGACTT-AAAAGCCATCATTA
droAna3 scaffold_13340:20918499-20918555 + GAGTAAAGGATTCTGCTCCTTCCTGACCGAGGATGTCCGAGGTCTGG---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396413:1486303-1486379 - GAGTAAAGGATTCTGTTCATTTTTGACCGAGGATGTCCGAGGTCTGG---CAAGTAAGTACCACATT---CTAGCA-----------TTAAAT----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:1037276-1037331 + GAGTAAGGGATTCCTATC---ATTCGCTGACGATGGACGAGGCCTAA---CAAGTGAGTATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:3823527-3823582 + GAGTAAGGGATTCCTATC---ATTCGCTGACGATGGACGAGGCCTAA---CAAGTGAGTATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:5350269-5350322 + GAATAAAGGATTTCT---ATCATTTGCTGATGATGGTCGAGGTTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:3549147-3549200 + GAATAAAGGATTCTTATC---ATTCGTTGATGATGGCCGAGGCTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:7845808-7845861 + GAATAAAGGATTCTTATC---GTTCGCTGATGAAGGCCGAGGATTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:6220132-6220185 + GAATAAGGGATTCTTATC---ATTTGCTGGCGATGGCCGAGGCTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GAGTAAAGGATTCTGCTCGCTGTTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCAC-------TATAGCCT---------TCTAT----A--AATACAAAGAAATGTTACGGAGATCTCTATCT----------------T--T-A-------------------------------------------------------------------------------------------------------------------------------CTCGGTG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTCAGT-------TA-G---------------ATACTGTTTAAATAGT--------------TAATGCAACGTAATCACT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------ATATTAGTAAG-TCAGCAG--TT-A------AACGATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................TCGCTGTTTGCCGACGATGGACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................CGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..GTAAAGGATTCTGCTCGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...........................CGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.......................TTGCCGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................GATGGACGAGGTCTGA---CAAGTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
......................TTTGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.AGTAAAGGATTCTGCTCGCTGTTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
............................GACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.........................GCCGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........TCTGCTCGCTGTTTGCCGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............GCTCGCTGTTTGCCGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..............GCTCGCTGTTTGCCGACGATGGACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..GTAAAGGATTCTGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..GTAAAGGATTCTGCTCGCTGTTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................GATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droSim2
GAGTAAAGGATTCTGCTCGCTGTTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCAC-------TATAACCT---------TCTAT----A--AATACAAGGAAATGTTGCGGAGATCTCTATCT----------------TCTCT----------------------------------------------------------------------------ATCATGCA--------------------------------------------CTCGGTG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTCAGT-------TA-G---------------ATACTGTTTAAATGGT--------------TAATGCAACGTAATCACT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------ATATTAGTAAG-TCAGCAG--TT-A------AACGATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..GTAAAGGATTCTGCTCGCTGTTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00401300000000000000
..GTAAAGGATTCTGCTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300201000000000000
..GTAAAGGATTCTGCTCGCTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
................................ATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
..GTAAAGGATTCTGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
............................GACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100000000000000
............CTGCTCGCTGTTTGCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
........................TGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..............................CGATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................................................................................................................................CT----------------TCTCT----------------------------------------------------------------------------ATCATGCA--------------------------------------------CTCGGTG---GTTTT..............................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...........TCTGCTCGCTGTTTGCCGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
......................TTTGCCGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
......................TTTGCCGACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...............................GATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
........................TGCCGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.......................TTGCCGACGATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.......................TTGCCGACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
................TCGCTGTTTGCCGACGATGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...........TCTGCTCGCTGTTTGCCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................GATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..GTAAAGGATTCTGCTCGCTGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..GTAAAGGATTCTGCTCGCTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................................ATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000000000
dm3
GAGTAAAGGATTCTGTTCGCTATTTGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACCACCCT---CCTTCTTCTTTCTT----TCTAG----A--AACACAAGGAAATGTTACGGAGATCTCTATCT----------------T--TTACCTTTCACAAAC-----------------------------------------------------------------------------------TCTCAAGAATTCACGTACTATGCATTTGAGCACTCTACG---GTTTTCATTTCCTAATTA----AAGAGCT-GCTAAGT-------TA-G---------------ATACTGTATAAATAGT--------------TATGGCAACGTAATCATT----TAT--------------G-----AGTAT---GCTCTTA----------------------------T---CAA---GCTACACTATA-T------CTT--------------------------------------------------------ATATTAGTAAG-TCAGTAG--TT-A------AACGATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
GAGTAAAGGATTCTGTTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GACGATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GACGATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
........................TGCCGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000
......................TTTGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
....................TATTTGCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAAAGGATTCTGTTCGCTATTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTCGCTATTTGCCGACGATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................TTGCCGACGATGGACGAGGTCTGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCTGTTCGCTATTTGCCGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTTGCCGACGATGGACGAGGTCTGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...TAAAGGATTCTGTTCGCTATTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................ATTTGCCGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................TCGCTATTTGCCGACGATGGACGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................TACTATGCATTTGAGCACTCT.........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTGCCGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................ATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............GTTCGCTATTTGCCGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTGCCGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................CGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AACGTAATCATT----TAT--------------G-----AGTA.....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCCGACGATGGACGAGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................CACGTACTATGCATTTGAGC..............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................CGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............GTTCGCTATTTGCCGACGATGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GATGGACGAGGTCTGA---CAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................GCCGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................TTTGCCGACGATGGACGAGGTCTGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............TGTTCGCTATTTGCCGACGATGGACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.............TGTTCGCTATTTGCCGACGATGGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................GATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................TGCCGACGATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................TATTTGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTCGCTATTTGCCGACGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGCCGACGATGGACGAGGTCTGA---TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................ATTTGCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTATTTGCCGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGGATTCTGTTCGCTATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCCGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCGACGATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................ATTTGCCGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTGTTCGCTATTTGCCGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCTGTTCGCTATTTGCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................GACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................TTTGCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGATGGACGAGGTCTGA---CAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..GTAAAGGATTCTGTTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGGATTCTGTTCGCTATTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAGCACTCTACG---GTTTTCATTTCCT......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGCCGACGATGGACGAGGTCTGA---CAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................TTTGCCGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATTTGCCGACGATGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AATTA----AAGAGCT-GCTAAGT-------TA-G---------------ATACTGT.............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTATTTGCCGACGATGGACGAGGTCTGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTGCCGACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AATCATT----TAT--------------G-----AGTAT---GCTCT............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................CGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...TAAAGGATTCTGTTCGCTATTTGCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................TCTACG---GTTTTCATTTCGA......................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
droEre2
GAGTAAAGGATTCTGCTCGCTGTTCGCCGACGATGGACGAGGTCTGA---CAAGTAAGTACTACTTT---CTACTT-----------TTTTAT----A--AATACGAGGAAGTGTTACGGAGATCTCGATCT----------------T--TT----------------------------------------------------------------------------ATCATGCA---------C--CCCCAAGAAT------------------------------------GCATTTCCCAACCT----GAATGCT-GCTCAGT-------TGCGATATCTTTCGAACGTATACTACTTAAATAGT--------------TAATGCAACATAATCA-----------------------G-----CGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTAGA-T------CTC--------------------------------------------------------GCATTAGTAAG-TCAGCAT--TT-A------AGTGATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GTAAAGGATTCTGCTCGCTGTTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.........ATTCTGCTCGCTGTTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..............GCTCGCTGTTCGCCGACGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..GTAAAGGATTCTGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..GTAAAGGATTCTGCTCGCTGTTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
............................GACGATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............CTGCTCGCTGTTCGCCGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.....................GTTCGCCGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................GCAACATAATCA-----------------------G-----CGTAT---G................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................................................................................................................................GCTCAGT-------TGCGATATCTTTCGAA.......................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------G-----CGTAT---GCTCTTA----------------------------T---CAAGA-G...................................................................................................................2211.0010000100
...............CTCGCTGTTCGCCGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
droYak3
GAGTAAAGGATTCTGCTCGCTGTTTGCTGACGATGGACGAGGTCTGA---CAAGTAAGTATCTAT-----CCA--TCTTT-TG----TTTTAT---AA--AATACAAGGAAGTGTTACAGAGATCTCTTTAT----------------CTTTT----------------------------------------------------------------------------ATCATGCA---------C--TCTCAACAGT------------------------------------TCATTTCCTAACCC----AAATGCT-GACAAGT-------TAAGATA--------------ACTACTTGAATAGT--------------TACTGCAATGTAATCA-----------------------G-----AGTAT---GCTCTTA----------------------------T---CAAGA-GCTGCACTATA-T------CTC--------------------------------------------------------GTATTAGTAAC--TGGCAT--TTGA------AACGATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................GACGATGGACGAGGTCTGA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300100020000
..GTAAAGGATTCTGCTCGCTGTTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00310100010000
........................TGCTGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300000030000
..............GCTCGCTGTTTGCTGACGATGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200110000000
.......................TTGCTGACGATGGACGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............................GACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........ATTCTGCTCGCTGTTTGCTGACGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................GATGGACGAGGTCTGA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................ACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001
..GTAAAGGATTCTGCTCGCTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
............................GACGATGGACGAGGTCTGA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
...........................TGACGATGGACGAGGTCTGA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATGTAATCA-----------------------G-----AGTAT---GCT..............................................................................................................................................................1811.00100010000000
........GATTCTGCTCGCTGTTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..GTAAAGGATTCTGCTCGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
............................GACGATGGACGAGGTCTGA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..GTAAAGGATTCTGCTCGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
..GTAAAGGATTCTGCTCGCTGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.....................GTTTGCTGACGATGGACGAGGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............CTGCTCGCTGTTTGCTGACGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................TACTGCAATGTAATCA-----------------------G-----AGTAT---GCT..............................................................................................................................................................2511.00100000010000
..GTAAAGGATTCTGCTCGCTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..GTAAAGGATTCTGCTCGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
......AGGATTCTGCTCGCTGTTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
...........................TGACGATGGACGAGGTCTGA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................TGAATAGT--------------TACTGCAATGT...........................................................................................................................................................................................................1911.00100000010000
............CTGCTCGCTGTTTGCTGACGATGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
..............GCTCGCTGTTTGCTGACGATGGACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.................CGCTGTTTGCTGACGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.................CGCTGTTTGCTGACGATGGACGAGGTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........TTCTGCTCGCTGTTTGCTGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...................CTGTTTGCTGACGATGGACGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
GAATAAAGGATTCTGCTCGCTGTTTGCCGATGATGGACGAGGTCTGA---CAAGTAAGTAGAAGAAT---CTATATCTTT---------CTTT-----------TTGAGTTACGGAATAGAAATCTCTATCA----------------T--T---------------------------------------------------GGAAAATTGGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------------------------CTCTATAATAATCAAGGGCCTC--T---TTTCTAA----------------------------T---CAA-------------------------------------------------------------------------------------------GCTAAGCAT--TTCT------ATTGATASizeHit CountTotal NormTotal
No Reads
droBia1
GAATAAGGGATTCTGCTCGCTCTTCGCCGACGATGGACGAGGTCTGA---CAAGTAAGTAGTCGCAT---TTTGTTT-----------TGTAT----A--A---GTAGGGTGTGACCCAGAAATCTCTATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAATAAAGGATTCTGTTCGCTCTTTGCTGACGATGGACGAGGTCTGA---CAAGTAAGTAAAAGAAT---CTTTATCATTATATCTT-TAA-----------------------ATACAGAAATCTCTATCT----------------CTTTT----------------------------------------------------------------------------ATGA---AAAGTTTGAAATTTCCAAAGAATTCGCGTAGTAATCACTTAAGCAGTATATATATTTTATCATTTCCTAA--------AGAATTCGCGTAGTATCCAGTAA-T---------------TGGCTTTTTAAATTCTTTAAAAAAATCGTATAATAAAATGTAATCAATATTTTATCTCTCTCAAAATCAAAATTCTCTAT---TTTCTAA----------------------------T---CAACAAAATGCATTATAATCTAGTGCTCATATTCAACTAAATATATGGCCAAGAGGCTTTTAAA--------AATAAAACTGCAGCGATAGCAAGTTAAGCAT--TTCG------ATTGATASizeHit CountTotal NormTotal
No Reads
droEle1
GAATAAAGGATTCTGTTCGCTGTTCGCTGACGATGGAAGAGGTCTGA---CAAGTAAGTAGAAAACG---TTTGATCTTTATATCCC-AAAGTATTAATCGATAA--CAGGGTAACACAGAAATCTCTAGTAGTCAGTTAAACAATCTT---TACTTGATATAAAT-----------------------------------------------------------------------------------TTTTAAAAATATA----------------------------------------------------------------------------TAAA--------------AATGAATAAGT----------------------------ACTCAATATATTATACAT---------AA-----ACTTC---ACTCTGA----------------------------T---CATGA-A------------------ATTAAATTCCACGAAATA--------------TTTTAAA-ACAACTAAACAAGATTTCCGCGATAGCAATATTAGCAT--TTCG------ATTGATASizeHit CountTotal NormTotal
No Reads
droRho1
GAATAAAGGATTCTGTTCGCTGTT---CGATGATGGAAGAAGTCTGACGACAAGTAAGTAGAAAAAG---CTATAACATTATGTTCC-TG-------ATTTCTAA--CAGGGTGTTACTGAAATCTCTGCCA----------------A--TCACTTGGTTTAAAATATCATGAAGATATCCTAATTGTAACGATATTTCATTGG-----------------------------AAA---------T--TCTT------------------------------------------------------------------------------------------------------TACTGTTTAGG------------------------------------------------------------------------ATCTTACTCTAAAGCTCTAGCTCTTATATCATTATCATGAAGAGTATACATTACAATCTAAT------------CC-------------AAAGG-TTTTATAATTAATTAACAAAGATTACCGCTATAGCACAATTAGCAT--TTTG------ATTGATASizeHit CountTotal NormTotal
No Reads
droFic1
GAATAAGGGATTCTGCTCGCTCTTCGCCGACGATGGACGAGGTTTGA---CAAGTAAGTAGAAACCC---CTAGAA-----------TAAAGT--TAA--GATTA--AAGGGTGTAGCAGAAATCTTACAAAT---------------T--C-A-----------------------------------ATCC--------CTAATCCCCTAGAAAAACTTATATTT---AG--------------------------------------------------------------------ATCTAATTT----GACTGCA-TCT------------AAAATA--------------ACTCTTGCAATATC--------------AGCTCTATTTCAATCG-----------------------G-----AAATATCACTTCCAA----------------------------T---CATTA-G---CATT--------AT------------CT-------------ATTCG-TTTTGAATATAATCAGCAGTGATTTTCGCGATAGCAC---TGCCAC--TTCG------ATTGATASizeHit CountTotal NormTotal
No Reads
droKik1
GAATAAAGGATTCTGTTCGCTGTTTGCTGACGATGGACGAGGCTTAA---CAAGTAAGTAGAATATTTCCCTACAAATT---------TCTTA----T--AACTC--AGGGGTGCTTCAAAGATCTAAAAAAT---------------T--C-A-----------------------------------ATAG--------ATGGGGAACTAAAAAAATGTATACATTTCTGATTAA---------T--TTACAACAAT------------------------------------GTCTTTACAAAAACAATTGACTGAT-GTT------------AA--TA--------------ATCCTTATACTAGC--------------TTTATCAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCAAA-TCAATAGACTT-AAAAGCCATCATTASizeHit CountTotal NormTotal
No Reads
droAna3
GAGTAAAGGATTCTGCTCCTTCCTGACCGAGGATGTCCGAGGTCTGG---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......AGGATTCTGCTCCTTCCTGACCGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........TTCTGCTCCTTCCTGACCGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................ACCGAGGATGTCCGAGGTCTGG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........................CCGAGGATGTCCGAGGTCTGG---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
..GTAAAGGATTCTGCTCCTTCCTGACCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......................CTGACCGAGGATGTCCGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................GATGTCCGAGGTCTGG---CAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................GAGGATGTCCGAGGTCTGG---CAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
GAGTAAAGGATTCTGTTCATTTTTGACCGAGGATGTCCGAGGTCTGG---CAAGTAAGTACCACATT---CTAGCA-----------TTAAAT----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GAGTAAGGGATTCCTATC---ATTCGCTGACGATGGACGAGGCCTAA---CAAGTGAGTATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................TTCGCTGACGATGGACGAGGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................CGCTGACGATGGACGAGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
.........ATTCCTATC---ATTCGCTGACGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............ATC---ATTCGCTGACGATGGACGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
...............ATC---ATTCGCTGACGATGGACGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
.....................ATTCGCTGACGATGGACGAGGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................CGCTGACGATGGACGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
droPer2
GAGTAAGGGATTCCTATC---ATTCGCTGACGATGGACGAGGCCTAA---CAAGTGAGTATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................ACGATGGACGAGGCCTAA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
............................GACGATGGACGAGGCCTAA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
......................TTCGCTGACGATGGACGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...........................TGACGATGGACGAGGCCTAA---CAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................C---ATTCGCTGACGATGGACGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........TTCCTATC---ATTCGCTGACGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................GGACGAGGCCTAA---CAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.402200000
droWil2
GAATAAAGGATTTCT---ATCATTTGCTGATGATGGTCGAGGTTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................CATTTGCTGATGATGGTCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
............................GATGATGGTCGAGGTTTAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................CATTTGCTGATGATGGTCGAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....................CATTTGCTGATGATGGTCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.........................GCTGATGATGGTCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
........................TGCTGATGATGGTCGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................ATCATTTGCTGATGATGGTCGAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
........................TGCTGATGATGGTCGAGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................TTTGCTGATGATGGTCGAGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................TCATTTGCTGATGATGGTCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.....................ATTTGCTGATGATGGTCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......................TTTGCTGATGATGGTCGAGGTTTAA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.....................ATTTGCTGATGATGGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
....................CATTTGCTGATGATGGTCGAGGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................TGATGATGGTCGAGGTTTAA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
.......................TTGCTGATGATGGTCGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
GAATAAAGGATTCTTATC---ATTCGTTGATGATGGCCGAGGCTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................C---ATTCGTTGATGATGGCCGAGGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........ATTCTTATC---ATTCGTTGATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.........................GTTGATGATGGCCGAGGCTTAA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............CTTATC---ATTCGTTGATGATGGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...............ATC---ATTCGTTGATGATGGCCGAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.........................GTTGATGATGGCCGAGGCTTAA---CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
............................GATGATGGCCGAGGCTTAA---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............ATC---ATTCGTTGATGATGGCCGAGGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
............................GATGATGGCCGAGGCTTAA---C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......GGATTCTTATC---ATTCGTTGATGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........................TTGATGATGGCCGAGGCTTAA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAATAAAGGATTCTTATC---GTTCGCTGATGAAGGCCGAGGATTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....AAAGGATTCTTATC---GTTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................C---GTTCGCTGATGAAGGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............TATC---GTTCGCTGATGAAGGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
............CTTATC---GTTCGCTGATGAAGGCCGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..ATAAAGGATTCTTATC---GTTCGCTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............CTTATC---GTTCGCTGATGAAGGCCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................GATGAAGGCCGAGGATTAA---CAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..ATAAAGGATTCTTATC---GTTCGCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............TTATC---GTTCGCTGATGAAGGCCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.AATAAAGGATTCTTATC---GTTCGCTGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................GTTCGCTGATGAAGGCCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
GAATAAGGGATTCTTATC---ATTTGCTGGCGATGGCCGAGGCTTAA---CAAGTAAGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................GATGGCCGAGGCTTAA---CAATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110

Generated: 05/17/2015 at 11:42 PM