ID:

dse_1279

 Coordinate:

scaffold_4:1434140-1434235 -

 Confidence:

confident

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.5

Flybase annnotation

intron [Dsec\GM12412-in]; utr5 [utr5_plus_14039]; CDS [Dsec\GM12412-cds]; CDS [Dsec\GM12412-cds]; utr5 [utr5_plus_14038]

No Repeatable elements found

Sense Strand Reads

CCGCAAGCTGCTCGACCAGCATGGTTTCGAACGCAGTCTGCTCTCGAATTGTGAGTGGGGGAAACCTAAGTACTTATATTGAAATGATCTATACCTTAGGATTAGTAGACTAAATGGGTTGTGACTTTCGATTTCGCCCATTCAAGGGATTTGTTTGCTAGAGCACGAGAGCGATCTGGATACCGGCAGGATTACC

**************************************************.((((((((.((((...((((((((((.......((((((........)))))).........))))))....))))....)))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 M054

female body

 V113

male body		 V114

embryo
.............................................................................................................................TTTCGATTTCGCCCATTCAAGT................................................. 22 1 1 92.00 92 41 27 20 4
.............................................................................................................................TTTCGATTTCGCCCATTCAAG.................................................. 21 0 1 62.00 62 29 27 6 0
..................................................GTGAGTGGGGGAAACCTAAGT............................................................................................................................. 21 0 1 11.00 11 3 5 3 0
.............................................................................................................................TTTCGATTTCGCCCATTCAAGA................................................. 22 1 1 9.00 9 4 3 1 1
.............................................................................................................................TTTCGATTTCGCCCATTCAA................................................... 20 0 1 6.00 6 2 4 0 0
..................................................GTGAGTGGGGGAAACCTAAG.............................................................................................................................. 20 0 1 4.00 4 0 3 1 0
.............................................................................................................................TTTCGATTTCGCCCATTCA.................................................... 19 0 1 3.00 3 2 0 1 0
.............................................................................................................................TTTCGATTTCGCCCATTCAAGC................................................. 22 1 1 3.00 3 1 2 0 0
................................................................................................................AATGGGTTGTGACTTTCGATT............................................................... 21 0 1 2.00 2 1 0 1 0
..................................................GTGAGTGGGGGAAACCTAAGTA............................................................................................................................ 22 0 1 2.00 2 0 1 1 0
...........................................TCGAATTGTGAGTGGGGGAAACCT................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
.............................................................................................................................TTTCGATTTCGCCCATCCAAGT................................................. 22 2 1 1.00 1 0 0 1 0
.............................................................................................................................................................CTAGAGCACGAGAGCGATCTG.................. 21 0 1 1.00 1 1 0 0 0
............................................................................................................................TTTTCGATTTCGCCCATTCAA................................................... 21 1 1 1.00 1 0 1 0 0
..................................................GTGAGTGGGGGAAACCTAAGTTTTT......................................................................................................................... 25 2 1 1.00 1 1 0 0 0
..............................................................................................................................................CAAGGGATTTGTTTGCTAGAG................................. 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................TTTCGATTTCCCCCATTCAAGT................................................. 22 2 2 1.00 2 0 2 0 0
.........................................................................................................................TGACTTTCGATTTCGCCCATT...................................................... 21 0 1 1.00 1 0 0 1 0
............................................................................................................................................TTCAAGGGATTTGTTTGCTAG................................... 21 0 1 1.00 1 0 0 1 0
...........................................................................................................................................................................CGATCTGGATACCGGCAGTAT.... 21 1 1 1.00 1 0 1 0 0
..........................................................................................................AGACTAAATGGGTTGTGACTT..................................................................... 21 0 1 1.00 1 0 1 0 0
....................................................................................................................................................ATTTGTTTGCTAGAGCACGAG........................... 21 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................TGCTAGAGCACGAGAGCGATC.................... 21 0 1 1.00 1 0 1 0 0
.............................................................................................................................TTTAGATTTCGCCCATTCAAGT................................................. 22 2 1 1.00 1 0 1 0 0
.........................................................................................................TAGACTAAATGGGTTGTGACT...................................................................... 21 0 1 1.00 1 1 0 0 0
.....................TGGTTTCGAACGCAGTCTGCTT......................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0
.............................................................................................................................TTTCGATTTCGCCCATTCAAGTT................................................ 23 2 1 1.00 1 0 1 0 0
................................................................................GAAATGATCTATACCTTAGGA............................................................................................... 21 0 1 1.00 1 1 0 0 0
......................................................................................................................................................TTGTTTGCTAGAGCACGAGAG......................... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................GATTTCGCCCATTCAAGGG................................................ 19 0 1 1.00 1 0 0 0 1
..................................................GTGAGTGGGGGAAACCTAAGA............................................................................................................................. 21 1 1 1.00 1 1 0 0 0
...............................................................................................................................TCGATTTCGCCCATTCAAGT................................................. 20 1 1 1.00 1 1 0 0 0
...................................................................................................................................................................CACGAGAGCGATCTGGATACG............ 21 1 1 1.00 1 0 1 0 0
.............................................................................................................................TTTCGATTTCTCCCATTCAAGA................................................. 22 2 1 1.00 1 0 1 0 0
.............................................................................................................................TTTCGATTCCGCCCATTCAAGT................................................. 22 2 1 1.00 1 1 0 0 0
....................................................................................................ATTAGTAGACTAAATGGGTTG........................................................................... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................GATTTCGCCCATTCAAGGGAT.............................................. 21 0 1 1.00 1 0 1 0 0
..................................................GTGAGTGGGGGAAACCTATGT............................................................................................................................. 21 1 1 1.00 1 0 0 0 1
......................................................................................................................................................................GAGAGCGATCTGGATACCGGC......... 21 0 1 1.00 1 0 0 1 0
........................TTTCGAACGCAGTCTGCTCTC....................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................TTTGCTAGAGCACGAGAGCGA...................... 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................TTTCGATTTCGCCCATCCAAG.................................................. 21 1 1 1.00 1 1 0 0 0
................................GCAGTCTGCTCTCAAATTGTG............................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
.............................................................................................................................................................................ATCTGGATACCGGCAGGATTA.. 21 0 1 1.00 1 1 0 0 0
................................................................................................TAGGATTAGTAGACTAAATGG............................................................................... 21 0 1 1.00 1 0 1 0 0
.............................................................................................................................TTTCGATTTCCCCCATTCAA................................................... 20 1 2 0.50 1 0 1 0 0
.........................................................................................................................................................................AGCTATCTGGATACCGGT......... 18 2 4 0.25 1 0 1 0 0
.........................................................................................................................................................TTGGCAAGAGCATGAGAGC........................ 19 3 20 0.20 4 1 3 0 0
..............................................AATGGATAGTGGGGGAAACCT................................................................................................................................. 21 3 5 0.20 1 0 0 0 1
..................................................GTGAGTGGGGGAAACCTTT............................................................................................................................... 19 2 6 0.17 1 0 0 1 0
..............................................AGTTCTGAGTGGGGGAAA.................................................................................................................................... 18 2 10 0.10 1 0 0 0 1
.............GACAAGCATGGTTAGGAAC.................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

GGCGTTCGACGAGCTGGTCGTACCAAAGCTTGCGTCAGACGAGAGCTTAACACTCACCCCCTTTGGATTCATGAATATAACTTTACTAGATATGGAATCCTAATCATCTGATTTACCCAACACTGAAAGCTAAAGCGGGTAAGTTCCCTAAACAAACGATCTCGTGCTCTCGCTAGACCTATGGCCGTCCTAATGG

**************************************************.((((((((.((((...((((((((((.......((((((........)))))).........))))))....))))....)))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 M054

female body

 V113

male body
......CGACGAGCTGGTCGTACCAAA......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
..................................TCAGACGAGAGCTTAACACTC............................................................................................................................................. 21 0 1 1.00 1 0 0 1
....................TACCAAAGCTTGCGTCAGACGA.......................................................................................................................................................... 22 0 1 1.00 1 0 0 1
................................................................................................................................................................CTCGTGCTCTCGCTAGACCTAT.............. 22 0 1 1.00 1 1 0 0
GGCGTTCGACGAGCTGGTC................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0
..............TGGTCGTACCAAAGCTTGCGT................................................................................................................................................................. 21 0 1 1.00 1 0 1 0
...............................................................................................................................................................TCTCGTGCTCTCGCTAGACCT................ 21 0 1 1.00 1 0 1 0
.................................................................................TTTACTAGATATGGAATCCTA.............................................................................................. 21 0 1 1.00 1 0 0 1
....................................................................................................................................................................TGCTCTCGCTAGACCTATGGC........... 21 0 1 1.00 1 0 0 1
...............................................................................ACTTTACTAGATATGGAATC................................................................................................. 20 0 1 1.00 1 1 0 0
...................................................................................................................................................................GTGCTCTCGCTAGACCTATGGC........... 22 0 1 1.00 1 0 1 0
.............................TTGCGTCAGACGAGAGCTTAA.................................................................................................................................................. 21 0 1 1.00 1 0 1 0
...................GTACCAAAGCTTGCGTCAGAC............................................................................................................................................................ 21 0 1 1.00 1 0 1 0
.................................................................................................................................................................TCGTGCTCTCGCTAGACCTATG............. 22 0 1 1.00 1 1 0 0
..........................................................................................................................CTGAAAGCTAAAGCGGGTAA...................................................... 20 0 1 1.00 1 0 1 0
.............................................................................................................................................................GATCTCGTGCTCTCGCTAGA................... 20 0 1 1.00 1 0 0 1
....................TACCAAAGCTTGCGTCAGACG........................................................................................................................................................... 21 0 1 1.00 1 1 0 0
........................................................................................................................................................................CTCGCTAGACCTATGGCCGTC....... 21 0 1 1.00 1 1 0 0
..................................................................................................................................................................CGTGCTCTCGCTAGACCTATG............. 21 0 1 1.00 1 1 0 0
......CGACGAGCAGGTCGTACCAAAG........................................................................................................................................................................ 22 1 1 1.00 1 1 0 0
.............................................................................TAACGTTACTAGATAGGGG.................................................................................................... 19 3 16 0.06 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_4:1434090-1434285 - dse_1279 confident CCGCAAGCTGCTCGACCAGC---ATGGTTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGGGAAACC-T--AAGTACTTATATTGA-AATGATCTATACCT---------------------------------T------------AGGATTAGTAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------TT----CG-CCCATTCAAGGGATTTGTTTGCTAGAGCACGAGAGCGATCTGGATACCGGCAGGATTACC
droSim2 x:4966690-4966892 + dsi_22201 confident CCGCAAGCTGCTCGACCAGC---ATGGCTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGGGAAACC-C--ATGTACATATATTGA-AATGCTCTATACCT---------------------------------TA-----TAACTTGGGATTAGTAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------TT----CG-CCCATTCAAGGGATTTGTTTGCTAGAGCACGAGAGCGATCTGGATACCGGCAGGATAACC
dm3 chrX:5321674-5321888 + CCGCAAGTTGCTCGATCAGC---ATGGTTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGAA--ACC-CAGATGTACATATATTAAAAATGCTCTATACTG---------------------------------TATGCTCTATCTTAAGATTAGCAAACTATTATAAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTTGAT------------TT----TGCCCCATTTAAGGGATTTGTTTGCTAGAGCACGAAAGCGATCTGGATACCGGCAGGATTACA
droEre2 scaffold_4690:2675379-2675621 + ACGCAAGCTGCTCGACCAGC---ATGGTTTCGAACGCAGTCTGCTCTCCAATTGTGAGTG-----------GGAA--ACC-T--ATGTA----TATTGA-AATGCACTATTCCGCACACATAGATGATGATGCTCGCAGATGTTCGTT------------CAGATCAATAGACT-----GAATGTCAGTAAGTTGTCA---------GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTCTGTTACTTATGAT------------TT----CG-CCCATTTAAGGGATTTGTTTGCTCGAGCACGAGAGCGATCTGGATACGGGCAGGATCACC
droYak3 X:3148469-3148657 - ACGCAAGCTGCTCGACCAGC---ATGGCTTCGAACGCAGTCTGCTCTCCAATTGTGAGTG-----------GGTGTAACC-A--ATGTAGATATATC---AATGATC------------------------------------------------------------------T-----AAATGGGGG----TGGCCA---------GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTTCTGTGACTTATGAT------------TT----CG-CCCATTTAAGGGATTTGTTTGCTGGAGCACGAAAGTGATTTGGATACCGGCAGGATCGCC
droEug1 scf7180000409095:341556-341751 + CCGCAAGCTGCTCAATCAGC---ATGGTTTCGAACGAAGTCTGCTCTCGAACTGTGAGTG-----------GGAA--TCTACAGATG-------------------------------------------------------------------------------------------------AGA------------------------------------------------------------CAGAAGATATATTCTTTGGATGC--TGTT---------------------------------GAC-----------A-----------TTCT--------------------------------------------------------ATTCTATCTTCTACGATATCCCAT------------GT-----C-TCAATTTAAGGGATCTGCTTGCTGGAACACGAGAGCGAGCTGGACACCAGCAGGGTCACC
droBia1 scf7180000302069:498445-498682 - CCGCAAGCTGCTCGAGCAGC---ATGGCTTCGAACGAAGTCTGCTTTCCAATTGTGAGTG-----------AGCAA--TA---------------------------------------------------------------------------------------------T-----GAT---------------------------------------------------------------------------------TTGAAAA-------------------------------------------------GATGATAGTACCTTAGTACGAGAACGATTACATATTTTACCGAACAGTAATTGAGTGATTAATACCAAATCAATAACTGTCATCTTCTGCGACCTCTTGT------------TT-----T-CCCATCTAAGGGATCTGCTTGCTGGAGCACGAGAGCGAACTGGAGACCAGCAGAACCACC
droTak1 scf7180000415077:69060-69120 + CCGCAAACTGCTCAACCAGC---ATGGCTTCGAACGAAGTCTACTTTCAAATTGTGAGTG-----------AGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491240:546428-546585 + ACATGTGCTGGTGGATAAAT---ACAACTTCGACAAGTCTTTCATCTCCAACTGTAAGCG-----------AATTT--CA-G--ATCTAGATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---------TACTT------TA--TTAAA---CTAATCGA-TTTTTGGTAGGGATCTGTCTGGTGGAGCACGAGAGTGAACTGAATACCAGCAAAATAACA
droRho1 scf7180000779506:1445006-1445280 + GCGAAAACTGCTCGATCAGC---ACGGTTTCGAACGAAGTCTGCTCTCCAATTGTGAGTG-----------GGAAA--TC---------------------------------------------------------------------------------------------T-----AATTGAATG----TGGACTTCTAAGC--------------------------TCTAAGCACTTCTAAGCTCAAGTTACTTTCTTTTGAAAT-------------------------------------------------TGTTTTGGAGCTATCATACCATTATTATTAACTATTATACACAAA------------GTCAATACCAAATCTAAATA---GATCTTATTATAATT--TA----CTT------TT----TC-CCCATTTTAGGGATATGTTTGCTGGAGCACGAGAGCGACCTAGAGTCCAGCAGGATCACC
droFic1 scf7180000454072:2782210-2782463 - CCGCAAACTCCTCGATCAGC---ATGGCTTCGAACGGAGTCTGCTCTCCAATTGTGAGTG-----------AGGTG--TT---------------------------------------------------------------------------------------------C-----ATTAGAAAA-------------------------------------------TCAATGTTCTTCGTCGTTCCTGTTCTATCCTAGTTTAAAAA-----------------------------------------------TTTACATGAGCAGTATTATGGT----------TTCAGCTCAAACG------------TATTATACTATGTATATCCG---GGTATTGCTATTAAT--TC----AAA------GT----TC-CTTGAACTAGGGATCTGCCTACTGGAGCACGAGAGCGATCTGGACACCACTAGGATCTCA
droKik1 scf7180000302469:874115-874277 - CAAGAAGCTGCTCGATCCGCCTTACAGGTTCGATCGATCGCTGCTCTCCAATTGTGAGTTTATATT-----------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTTTACATCATA------------------------------------------------------------------TAAAA-------------T-ACTCATAAT--------T-T-CC----TG-ACCCTTTCAGGGATCTGCCTGCTGGAGCACGAAAGCGACCTGGACACCAGCAGGATCACC
droAna3 scaffold_13117:983888-984041 - CCGTAAGCTGCTCGAACAAC---ACGGGTTCGAGCGCAGTTTGCTTTCCAATTGTGAGTTTAGCGA----------AATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATAGG---------TAGCC------TC--TAGAATA---ATTTGG---TTCCCCAGGGATTTGTCTTCTGGAGCACGAAAGCGAACTGGATACCAGCCGAACCACC
droBip1 scf7180000396425:1134310-1134461 + CCGTAAGCTGCTCGAACAAC---ATGGTTTCGAGCGTACTTTGCTTTCCAATTGTGAGTCTACCGA----------AATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA--TG---------TAGTC------TC--GCAACTA---ATTTGG---TTCCCCAGGGATTTGTCTCCTGGAGCATGAAAGCGAACTGGACACCAGCCGAACCACC
dp5 XL_group1a:8692829-8693015 - CCGCAAGCTGCTCGACCGGC---ACGGCTTTGAGCGCAGCCTTCTGTCCAACTGTAAGTA-----------GAATG--T--------------------------------------------------------------------------------------------------------GGGAGTGATTGTC---------TCTAGAGCCAATGGAATTTTGAATAT-----------------------------------------TCTT---------------------------------GGCTTTTAAAACACA---------------------------------------------------------------------------------------------------------TCCC----CA-CCGGCCGCAGGGATCTGTCTTCTGGAGCACGAGAGCGAACTGGAGACGACCCGAACCACT
droPer2 scaffold_15:1088431-1088617 - CCGTAAGCTGCTCGACCGGC---ACGGCTTTGAGCGCAGCCTTCTGTCCAACTGTAAGTA-----------GAATG--C--------------------------------------------------------------------------------------------------------GGGAGTGATTGGC---------TCTAGAGCCAATGGAATGGTGGATAT-----------------------------------------TCTT---------------------------------GGCTTTTAAAACACA---------------------------------------------------------------------------------------------------------TCCC----CA-CCGGCCACAGGGATCTGTCTTCTGGAGCACGAGAGCGAACTGGAGACGACCCGGACCACT
droWil2 scf2_1100000004521:6474714-6474874 + CCGTAAGCTGCTGAATCAGC---ATGGCTTTGAACGCAGTTTGCTATCCAATTGTGGGTATATAAA-----------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTTTTAAAGATCA------------------------------------------------------------------------------------TAATC------TTAGTGAAT---TTCAACCA-TAATTTACAGGGATTTGTCTGCTAGAACATGAAAGTGAATTGAACACTGCAAAAGTGACT
droVir3 scaffold_12970:10652235-10652401 - dvi_13922 ACGGAAGCTGCTGGAACAGC---ACGGCTTTGAGCGCAGCCTGCTTTCCAGTTGTGAGTA-----------GCGGG--GC-------------------------------------------------------------------------------------------------------GGGGGAGAGTTGCGA---------GT----GAACGGACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAC--AG---------TGGGC------TC--TTA---------------TATACACAGGGATATGCCTGCTGGAGCATGAGAGCGATCTGGACACCGCCAAGGTGACA
droMoj3 scaffold_6473:10759063-10759240 + CAGGAAGCTGCTGGAGCAGC---ACAGCTTCGAGCGCAGCCTGCTCAGCAATTGTGAGTG-----------ACAGAAAGA-G--AGACAGAGAGAGAGA--------------------------------------------------------------------------------------GAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGAGAGA---GAGGGGGAGAGACTT--AAC------------TT----CC-GCACTTTCAGGGATATGTCTGCTGGAGCATGAGAGCGACTTGGACACAGCCAAGCTGACA
droGri2 scaffold_3057:3403-3625 + CCGCAAGCTGCTCGAACAGC---ACAGCTTTGAGCGCAGCCTGCTCTCCAATTGTGAGTACACAGAGAGAGAGAGACAGA-G--AGATAGAGAGAGAGA--------------------------------------------------------------------------------------GAGAGAGA-----------------------------------------------------------G-----------------------ATAGAGAGAGAGAGAGAGAGAGAGAGAGATAGGGGGTCTTAAA--------------------------------------------------------------------------TA--TA---------TAGTC------TT--TG----T-CT--C-C--ACCTCACCAGGGATATGCTTGCTGGAGCATGAGAGCGAGTTGGATACCGCGAAGATGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CCGCAAGCTGCTCGACCAGC---ATGGTTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGGGAAACC-T--AAGTACTTATATTGA-AATGATCTATACCT---------------------------------T------------AGGATTAGTAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------TT----CG-CCCATTCAAGGGATTTGTTTGCTAGAGCACGAGAGCGATCTGGATACCGGCAGGATTACCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGT.................................................22192.00922720441
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAG..................................................21162.0062276029
.....................................................GTGAGTG-----------GGGGAAACC-T--AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................21111.00115303
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGA.................................................2219.0093114
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAA...................................................2016.0064002
.....................................................GTGAGTG-----------GGGGAAACC-T--AAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2014.0043100
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCA....................................................1913.0030102
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGC.................................................2213.0032001
....................................................................................................................................................................................AATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------T....................................................................2112.0020101
.....................................................GTGAGTG-----------GGGGAAACC-T--AAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021100
..............................................TCGAATTGTGAGTG-----------GGGGAAACC-T--................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAGCACGAGAGCGATCTG..................2111.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGATTTGTTTGCTAGAG.................................2111.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTCGAT------------TT----CG-CCCATT......................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGGGATTTGTTTGCTAG...................................2111.0010100
.........................................................................................................................................................................AGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTT......................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTTGCTAGAGCACGAG...........................2111.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGAGCACGAGAGCGATC....................2111.0011000
........................................................................................................................................................................TAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACT.......................................................................................2111.0010001
........................TGGTTTCGAACGCAGTCTGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGTT................................................2311.0011000
.................................................................................................GA-AATGATCTATACCT---------------------------------T------------AGGA................................................................................................................................................................................................................................................................................................................................................2111.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGCTAGAGCACGAGAG.........................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------------TT----CG-CCCATTCAAGGG................................................1911.0010010
.....................................................GTGAGTG-----------GGGGAAACC-T--AAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCGAT------------TT----CG-CCCATTCAAGT.................................................2011.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGAGCGATCTGGATACG............2111.0011000
...................................................................................................................................................................ATTAGTAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTG............................................................................................2111.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------------TT----CG-CCCATTCAAGGGAT..............................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCGATCTGGATACCGGC.........2111.0010100
...........................TTTCGAACGCAGTCTGCTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGAGCACGAGAGCGA......................2111.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGATACCGGCAGGATTA..2111.0010001
...................................................................................................................................................T------------AGGATTAGTAGACT-----AAATGG...........................................................................................................................................................................................................................................................................................................................2111.0011000
.....................................................GTGAGTG-----------GGGGAAACC-T--TT..............................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710100
droSim2
CCGCAAGCTGCTCGACCAGC---ATGGCTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGGGAAACC-C--ATGTACATATATTGA-AATGCTCTATACCT---------------------------------TA-----TAACTTGGGATTAGTAGACT-----AAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------TT----CG-CCCATTCAAGGGATTTGTTTGCTAGAGCACGAGAGCGATCTGGATACCGGCAGGATAACCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGT.................................................22110.0010000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAG..................................................2117.00700000070000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGA.................................................2216.00600000060000000000
....................................................................................................................................................A-----TAACTTGGGATTAGTAGACT-----.................................................................................................................................................................................................................................................................................................................................2115.00532000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCA....................................................1913.00300000030000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAA...................................................2012.00200000020000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAGCGATCTGGATACCGGC.........2212.00200000002000000000
..............ACCAGC---ATGGCTTCGAACGCAGTCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.....................................................................................................................................................................................ATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTCGAT------------TT----CG-CC..........................................................2511.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCGAT------------TT----CG-CCCATTCAAGA.................................................2311.00100000010000000000
..........................................................................................................................................................TAACTTGGGATTAGTAGACT-----.................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
......................................GTCTGCTCTCGAATTGTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
....................................................................................................................................................A-----TAACTTGGGATTAGTAGAC.......................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
....................................CAGTCTGCTCTCGAATTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATT......................................................1711.00100000010000000000
.....AGCTGCTCGACCAGC---ATGGCTTCGAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGATTTGTTTGCTAGA..................................2011.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAGCGATCTGGATACC............1911.00100000100000000000
........................TGGCTTCGAACGCAGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAGG.................................................2211.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGGATACCGGCAGGGC....1920.50101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAA..................................................2120.50100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGAT------------TT----CG-CCCATTCAAAA.................................................2220.50100000010000000000
..............................................TCGAATTGTGAGTG-----------GT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000010000000000
dm3
CCGCAAGTTGCTCGATCAGC---ATGGTTTCGAACGCAGTCTGCTCTCGAATTGTGAGTG-----------GGAA--ACC-CAGATGTACATATATTAAAAATGCTCTATACTG---------------------------------TATGCTCTATCTTAAGATTAGCAAACTATTATAAATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTTGAT------------TT----TGCCCCATTTAAGGGATTTGTTTGCTAGAGCACGAAAGCGATCTGGATACCGGCAGGATTACASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................GAATTGTGAGTG-----------GGAA--ACC-CA.................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000101100000000
..GCAAGTTGCTCGATCAGC---ATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGCGATCTGGATACCGG..........2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000
...........................TTTCGAACGCAGTCTGCTCTCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGCTCTCGAATTGTGAGTG-----------GG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCAAGTTGCTCGATCAGC---ATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTGAGTG-----------GGAA--ACC-CAGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................ATGCTCTATACTG---------------------------------TATGCTCT.........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................TGGTTTCGAACGCAGTCTGCTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......GTTGCTCGATCAGC---ATGGTTTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGAGCACGAAAGCGATCT...................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACGAAAGCGATCTG..................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATACCGGCAGGATTACA2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATCTGGATACCGGC.........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAGAGCACGAAAGCG.......................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................TGGTTTCGAACGCAGTCTGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGAAAGCGATCTGG.................1811.001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGTTGCTCGATCAGC---ATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGCTAGAGCACGAAAG.........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........TCGATCAGC---ATGGTTTCGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGCTAGAGCACGAAAGC........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTTGAT------------TT----TGCCCCAT.......................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTCGAACGCAGTCTGCTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................ATGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGACTTTTGAT------------TT----TGCCC..........................................................2611.001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTTCGAACGCAGTCTGCTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTGCTAGAGCACGAAAGCG.......................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
....AAGTTGCTCGATCAGC---ATGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TG-----------GGAA--ACC-CAGATGTACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droEre2
ACGCAAGCTGCTCGACCAGC---ATGGTTTCGAACGCAGTCTGCTCTCCAATTGTGAGTG-----------GGAA--ACC-T--ATGTA----TATTGA-AATGCACTATTCCGCACACATAGATGATGATGCTCGCAGATGTTCGTT------------CAGATCAATAGACT-----GAATGTCAGTAAGTTGTCA---------GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTCTGTTACTTATGAT------------TT----CG-CCCATTTAAGGGATTTGTTTGCTCGAGCACGAGAGCGATCTGGATACGGGCAGGATCACCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................ATAGATGATGATGCTCGCA..........................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.......................................................................................................................ATAGATGATGATGCTCGCAGATGTT....................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...............CCAGC---ATGGTTTCGAACGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...........................TTTCGAACGCAGTCTGCTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................................................................................................................CGCAGATGTTCGTT------------CAGATC..............................................................................................................................................................................................................................................................................................................................................2011.0010000100
......................................................................................................................................CGCAGATGTTCGTT------------CAGAT...............................................................................................................................................................................................................................................................................................................................................1911.0010000010
.......................................................................................................................ATAGATGATGATGCTCGCAGATGT.....................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGCTCGAGCACGAGAGC........................2111.0011000000
........................TGGTTTCGAACGCAGTCTGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................ATAGATGATGATGCTCGCAGA........................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAAGGGATTTGTTTGCT.....................................2111.0010000100
droYak3
ACGCAAGCTGCTCGACCAGC---ATGGCTTCGAACGCAGTCTGCTCTCCAATTGTGAGTG-----------GGTGTAACC-A--ATGTAGATATATC---AATGATC------------------------------------------------------------------T-----AAATGGGGG----TGGCCA---------GT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTTCTGTGACTTATGAT------------TT----CG-CCCATTTAAGGGATTTGTTTGCTGGAGCACGAAAGTGATTTGGATACCGGCAGGATCGCCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATACCGGCAGGATCGC.2111.00101000000000
............................TTCGAACGCAGTCTGCTCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAT------------TT----CG-CCCATTTAA...................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTTATGAT------------TT----CG-CCCATTTAAGT.................................................2311.00100000010000
...............CCAGC---ATGGCTTCGAACGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CCGCAAGCTGCTCAATCAGC---ATGGTTTCGAACGAAGTCTGCTCTCGAACTGTGAGTG-----------GGAA--TCTACAGATG-------------------------------------------------------------------------------------------------AGA------------------------------------------------------------CAGAAGATATATTCTTTGGATGC--TGTT---------------------------------GAC-----------A-----------TTCT--------------------------------------------------------ATTCTATCTTCTACGATATCCCAT------------GT-----C-TCAATTTAAGGGATCTGCTTGCTGGAACACGAGAGCGAGCTGGACACCAGCAGGGTCACCSizeHit CountTotal NormTotal
No Reads
droBia1
CCGCAAGCTGCTCGAGCAGC---ATGGCTTCGAACGAAGTCTGCTTTCCAATTGTGAGTG-----------AGCAA--TA---------------------------------------------------------------------------------------------T-----GAT---------------------------------------------------------------------------------TTGAAAA-------------------------------------------------GATGATAGTACCTTAGTACGAGAACGATTACATATTTTACCGAACAGTAATTGAGTGATTAATACCAAATCAATAACTGTCATCTTCTGCGACCTCTTGT------------TT-----T-CCCATCTAAGGGATCTGCTTGCTGGAGCACGAGAGCGAACTGGAGACCAGCAGAACCACCSizeHit CountTotal NormTotal
No Reads
droTak1
CCGCAAACTGCTCAACCAGC---ATGGCTTCGAACGAAGTCTACTTTCAAATTGTGAGTG-----------AGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACATGTGCTGGTGGATAAAT---ACAACTTCGACAAGTCTTTCATCTCCAACTGTAAGCG-----------AATTT--CA-G--ATCTAGATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---------TACTT------TA--TTAAA---CTAATCGA-TTTTTGGTAGGGATCTGTCTGGTGGAGCACGAGAGTGAACTGAATACCAGCAAAATAACASizeHit CountTotal NormTotal
No Reads
droRho1
GCGAAAACTGCTCGATCAGC---ACGGTTTCGAACGAAGTCTGCTCTCCAATTGTGAGTG-----------GGAAA--TC---------------------------------------------------------------------------------------------T-----AATTGAATG----TGGACTTCTAAGC--------------------------TCTAAGCACTTCTAAGCTCAAGTTACTTTCTTTTGAAAT-------------------------------------------------TGTTTTGGAGCTATCATACCATTATTATTAACTATTATACACAAA------------GTCAATACCAAATCTAAATA---GATCTTATTATAATT--TA----CTT------TT----TC-CCCATTTTAGGGATATGTTTGCTGGAGCACGAGAGCGACCTAGAGTCCAGCAGGATCACCSizeHit CountTotal NormTotal
No Reads
droFic1
CCGCAAACTCCTCGATCAGC---ATGGCTTCGAACGGAGTCTGCTCTCCAATTGTGAGTG-----------AGGTG--TT---------------------------------------------------------------------------------------------C-----ATTAGAAAA-------------------------------------------TCAATGTTCTTCGTCGTTCCTGTTCTATCCTAGTTTAAAAA-----------------------------------------------TTTACATGAGCAGTATTATGGT----------TTCAGCTCAAACG------------TATTATACTATGTATATCCG---GGTATTGCTATTAAT--TC----AAA------GT----TC-CTTGAACTAGGGATCTGCCTACTGGAGCACGAGAGCGATCTGGACACCACTAGGATCTCASizeHit CountTotal NormTotal
No Reads
droKik1
CAAGAAGCTGCTCGATCCGCCTTACAGGTTCGATCGATCGCTGCTCTCCAATTGTGAGTTTATATT-----------C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTTTACATCATA------------------------------------------------------------------TAAAA-------------T-ACTCATAAT--------T-T-CC----TG-ACCCTTTCAGGGATCTGCCTGCTGGAGCACGAAAGCGACCTGGACACCAGCAGGATCACCSizeHit CountTotal NormTotal
No Reads
droAna3
CCGTAAGCTGCTCGAACAAC---ACGGGTTCGAGCGCAGTTTGCTTTCCAATTGTGAGTTTAGCGA----------AATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATAGG---------TAGCC------TC--TAGAATA---ATTTGG---TTCCCCAGGGATTTGTCTTCTGGAGCACGAAAGCGAACTGGATACCAGCCGAACCACCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAACTGGATACCAGCCGAACC...2512.002100001
.........GCTCGAACAAC---ACGGGTTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..GTAAGCTGCTCGAACAAC---ACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................GTTCGAGCGCAGTTTGCTTTCCAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................CAAC---ACGGGTTCGAGCGCAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGAAAGCGAACTGGATACCAGCCG.......2711.001000001
....AAGCTGCTCGAACAAC---ACGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................ACGGGTTCGAGCGCAGTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGTCTTCTGGAGCAC..............................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAACTGGATACCAGCCG.......2111.001000001
.CGTAAGCTGCTCGAACAAC---ACGGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTCTGGAGCACGAAAGCG.......................2211.001100000
......GCTGCTCGAACAAC---ACGGGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
CCGTAAGCTGCTCGAACAAC---ATGGTTTCGAGCGTACTTTGCTTTCCAATTGTGAGTCTACCGA----------AATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA--TG---------TAGTC------TC--GCAACTA---ATTTGG---TTCCCCAGGGATTTGTCTCCTGGAGCATGAAAGCGAACTGGACACCAGCCGAACCACCSizeHit CountTotal NormTotal
No Reads
dp5
CCGCAAGCTGCTCGACCGGC---ACGGCTTTGAGCGCAGCCTTCTGTCCAACTGTAAGTA-----------GAATG--T--------------------------------------------------------------------------------------------------------GGGAGTGATTGTC---------TCTAGAGCCAATGGAATTTTGAATAT-----------------------------------------TCTT---------------------------------GGCTTTTAAAACACA---------------------------------------------------------------------------------------------------------TCCC----CA-CCGGCCGCAGGGATCTGTCTTCTGGAGCACGAGAGCGAACTGGAGACGACCCGAACCACTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAACTGGAGACGACCCGAACCA..2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCTGGAGCACGAGAGC........................2011.0010100000000
.................................................AACTGTAAGTA-----------GAATG--T--------------------------------------------------------------------------------------------------------GGGAG........................................................................................................................................................................................................................................................................................................................2211.0010000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGAACTGGAGACGACC.........1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTTCTGGAGCACGAGAGCTT......................2411.0010100000000
droPer2
CCGTAAGCTGCTCGACCGGC---ACGGCTTTGAGCGCAGCCTTCTGTCCAACTGTAAGTA-----------GAATG--C--------------------------------------------------------------------------------------------------------GGGAGTGATTGGC---------TCTAGAGCCAATGGAATGGTGGATAT-----------------------------------------TCTT---------------------------------GGCTTTTAAAACACA---------------------------------------------------------------------------------------------------------TCCC----CA-CCGGCCACAGGGATCTGTCTTCTGGAGCACGAGAGCGAACTGGAGACGACCCGGACCACTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
No Reads
droWil2
CCGTAAGCTGCTGAATCAGC---ATGGCTTTGAACGCAGTTTGCTATCCAATTGTGGGTATATAAA-----------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTTTTAAAGATCA------------------------------------------------------------------------------------TAATC------TTAGTGAAT---TTCAACCA-TAATTTACAGGGATTTGTCTGCTAGAACATGAAAGTGAATTGAACACTGCAAAAGTGACTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........TGAATCAGC---ATGGCTTTGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
droVir3
ACGGAAGCTGCTGGAACAGC---ACGGCTTTGAGCGCAGCCTGCTTTCCAGTTGTGAGTA-----------GCGGG--GC-------------------------------------------------------------------------------------------------------GGGGGAGAGTTGCGA---------GT----GAACGGACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAC--AG---------TGGGC------TC--TTA---------------TATACACAGGGATATGCCTGCTGGAGCATGAGAGCGATCTGGACACCGCCAAGGTGACASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................CAGCCTGCTTTCCAGTTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCTGGAACAGC---ACGGCTTTGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCATGAGAGCGATCT...................1811.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
..................GC---ACGGCTTTGAGCGCAGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCATGAGAGCGATCTGGACACC............2711.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................TGAGCGCAGCCTGCTTTCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGCTGGAGCATGAGAGCGATCTGGA................2811.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGAGCGATCTGGACAC.............1911.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCATGAGAGCGATCTGGACACCGC..........2711.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGCATGAGAGCGATCTGGACACC............2811.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
................CAGC---ACGGCTTTGAGCGCAGCCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
CAGGAAGCTGCTGGAGCAGC---ACAGCTTCGAGCGCAGCCTGCTCAGCAATTGTGAGTG-----------ACAGAAAGA-G--AGACAGAGAGAGAGA--------------------------------------------------------------------------------------GAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGAGAGA---GAGGGGGAGAGACTT--AAC------------TT----CC-GCACTTTCAGGGATATGTCTGCTGGAGCATGAGAGCGACTTGGACACAGCCAAGCTGACASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAGAGCGACTTGGACAC.............2011.001000001
...............................................................................................GAGA--------------------------------------------------------------------------------------GAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAGAGAGA---GAGGGG...............................................................................................24200.051100000
.....................................................................................GACAGAGAGAGAGA--------------------------------------------------------------------------------------GAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA................................................................................................................20200.051100000
droGri2
CCGCAAGCTGCTCGAACAGC---ACAGCTTTGAGCGCAGCCTGCTCTCCAATTGTGAGTACACAGAGAGAGAGAGACAGA-G--AGATAGAGAGAGAGA--------------------------------------------------------------------------------------GAGAGAGA-----------------------------------------------------------G-----------------------ATAGAGAGAGAGAGAGAGAGAGAGAGAGATAGGGGGTCTTAAA--------------------------------------------------------------------------TA--TA---------TAGTC------TT--TG----T-CT--C-C--ACCTCACCAGGGATATGCTTGCTGGAGCATGAGAGCGAGTTGGATACCGCGAAGATGACASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............ACAGC---ACAGCTTTGAGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110

Generated: 10/20/2015 at 11:05 PM