ID:

dse_12

 Coordinate:

scaffold_14:828189-828250 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

5pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.6 -35.2 -34.9

Flybase annnotation

utr5 [utr5_plus_133]

No Repeatable elements found

Sense Strand Reads

GTGTAGCTACTCCGCCTGGAGCCATCCGAATCCCTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTGATCATCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGACTAAAGCGCCACGTGGTAGAGATCGGATCGGATCGAA

***********************************..((((((..((((.((((((((((((.((..(((((((..............))))))))).)))))))))))).))))...))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body		 V114

embryo

 V115

head
..........................................................................................TTTGTTCGTTTGGCTTAAGTT................................................... 21 0 1 31577.00 31577 17403 12469 1229 476
..........................................................................................TTTGTTCGTTTGGCTTAAGTTA.................................................. 22 0 1 27821.00 27821 16623 7843 3003 352
..........................................................................................TTTGTTCGTTTGGCTTAAGT.................................................... 20 0 1 4042.00 4042 1641 2208 114 79
..........................................................................................TTTGTTCGTTTGGCTTAAGTTT.................................................. 22 1 1 2943.00 2943 1374 1523 18 28
..................................................ACTTGGGCCAAGGGAATGCAAACT........................................................................................ 24 0 1 1740.00 1740 63 335 1314 28
...........................................................................................TTGTTCGTTTGGCTTAAGTTA.................................................. 21 0 1 1530.00 1530 1420 73 36 1
...........................................................................................TTGTTCGTTTGGCTTAAGTT................................................... 20 0 1 1430.00 1430 1360 52 14 4
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAA................................................. 23 1 1 1028.00 1028 504 442 62 20
..........................................................................................TTTGTTCGTTTGGCTTAAG..................................................... 19 0 1 653.00 653 411 188 24 30
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAT................................................. 23 0 1 359.00 359 169 168 19 3
..........................................................................................TTTGTTCGTTTGGCTTAATTT................................................... 21 1 1 222.00 222 141 78 2 1
..........................................................................................TTTGTTCGTTTGGCTTAATTTA.................................................. 22 1 1 128.00 128 96 31 1 0
...........................................................................................TTGTTCGTTTGGCTTAAGTTT.................................................. 21 1 1 124.00 124 111 13 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGT.................................................... 19 0 1 115.00 115 109 4 2 0
..........................................................................................TTTGTTCTTTTGGCTTAAGTT................................................... 21 1 1 114.00 114 87 23 2 2
..........................................................................................TTTTTTCGTTTGGCTTAAGTT................................................... 21 1 1 113.00 113 103 8 2 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTTT................................................. 23 1 1 101.00 101 26 75 0 0
..........................................................................................TTTGTTCTTTTGGCTTAAGTTA.................................................. 22 1 1 100.00 100 87 6 6 1
..........................................................................................TTTTTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 97.00 97 79 10 7 1
..........................................................................................TTTGTTCGTTTGGCTTAAGTG................................................... 21 1 1 95.00 95 93 2 0 0
..........................................................................................TTTGTTCGTTTGGCTTAACTT................................................... 21 1 1 94.00 94 5 87 0 2
..................................................ACTTGGGCCAAGGGAATGCAAAC......................................................................................... 23 0 1 90.00 90 11 20 55 4
..........................................................................................TTTGTTCGTTTGGCTTAAATT................................................... 21 1 1 82.00 82 4 78 0 0
..........................................................................................TTTGTTCGTTTGGCTTACGTT................................................... 21 1 1 82.00 82 71 9 2 0
..........................................................................................TTTGTTCGTTTGGCTTAAGGT................................................... 21 1 1 78.00 78 76 2 0 0
..................................................ACTTGGGCCAAGGGAATGCAA........................................................................................... 21 0 1 77.00 77 5 57 10 5
............................................................................................TGTTCGTTTGGCTTAAGTTA.................................................. 20 0 1 77.00 77 70 2 4 1
..........................................................................................TTTGCTCGTTTGGCTTAAGTTA.................................................. 22 1 1 77.00 77 62 14 1 0
..........................................................................................TTTGTTAGTTTGGCTTAAGTTA.................................................. 22 1 1 77.00 77 69 6 2 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAAA................................................ 24 2 1 76.00 76 12 52 10 2
..........................................................................................TTTGTTAGTTTGGCTTAAGTT................................................... 21 1 1 76.00 76 68 8 0 0
..........................................................................................TTTGTTCGTTTGGCTTAACTTA.................................................. 22 1 1 71.00 71 8 59 3 1
..........................................................................................TTTGCTCGTTTGGCTTAAGTT................................................... 21 1 1 71.00 71 53 14 2 2
..........................................................................................TTTGTTCGTTTGGCTTACGTTA.................................................. 22 1 1 67.00 67 61 5 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTGA.................................................. 22 1 1 63.00 63 63 0 0 0
............................................................................................TGTTCGTTTGGCTTAAGTT................................................... 19 0 1 63.00 63 61 0 2 0
..................................................ACTTGGGCCAAGGGAATGCAAA.......................................................................................... 22 0 1 57.00 57 5 35 15 2
..........................................................................................TTTGTTCGTTTGGCTTAAATTA.................................................. 22 1 1 56.00 56 5 51 0 0
..................................................ACTTGGGCCAAGGGAATGCA............................................................................................ 20 0 1 54.00 54 10 24 19 1
..........................................................................................TTTGTTCGCTTGGCTTAAGTT................................................... 21 1 1 53.00 53 30 21 1 1
...........................................................................................TTGTTCGTTTGGCTTAAGTTAA................................................. 22 1 1 46.00 46 41 5 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGGTA.................................................. 22 1 1 44.00 44 44 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTC.................................................. 22 1 1 41.00 41 13 25 2 1
..........................................................................................CTTGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 40.00 40 27 7 5 1
..........................................................................................TTTGTTCGTTTTGCTTAAGTTA.................................................. 22 1 1 39.00 39 31 5 3 0
..........................................................................................TTTGTTCGTTTGGCTTAAGCT................................................... 21 1 1 37.00 37 11 23 2 1
..........................................................................................TTTGTTCGTTTTGCTTAAGTT................................................... 21 1 1 36.00 36 29 6 1 0
..................................................ACTTGGGCCAAGGGAATGC............................................................................................. 19 0 1 35.00 35 3 8 22 2
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAC................................................. 23 1 1 35.00 35 11 17 5 2
..........................................................................................CTTGTTCGTTTGGCTTAAGTT................................................... 21 1 1 33.00 33 16 14 3 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTA................................................... 21 1 1 33.00 33 21 11 0 1
..........................................................................................TTTGTTCGTTTGGCCTAAGTT................................................... 21 1 1 32.00 32 16 15 1 0
...........................................................................................TTGTTCGTTTGGCTTAAG..................................................... 18 0 1 32.00 32 31 1 0 0
..........................................................................................TTTGTTCGCTTGGCTTAAGTTA.................................................. 22 1 1 32.00 32 26 5 1 0
..........................................................................................TTTGTTTGTTTGGCTTAAGTTA.................................................. 22 1 1 31.00 31 12 4 14 1
..........................................................................................TTTGTTCGATTGGCTTAAGTT................................................... 21 1 1 30.00 30 27 3 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGA.................................................... 20 1 1 29.00 29 11 15 0 3
..........................................................................................ATTGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 28.00 28 26 2 0 0
..........................................................................................TGTGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 28.00 28 28 0 0 0
..........................................................................................TCTGTTCGTTTGGCTTAAGTT................................................... 21 1 1 28.00 28 14 12 1 1
..........................................................................................TTTGTTCGTTTGGCTCAAGTT................................................... 21 1 1 28.00 28 16 11 1 0
..........................................................................................TTTGTTCGTTTGGTTTAAGTTA.................................................. 22 1 1 27.00 27 13 5 9 0
..........................................................................................TTTCTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 27.00 27 16 7 4 0
..........................................................................................TGTGTTCGTTTGGCTTAAGTT................................................... 21 1 1 26.00 26 26 0 0 0
..........................................................................................TTTGTTCCTTTGGCTTAAGTT................................................... 21 1 1 26.00 26 16 8 2 0
..........................................................................................TTTGTTCGTTTGGCTTAGGTT................................................... 21 1 1 25.00 25 4 19 1 1
..........................................................................................TTTGTTTGTTTGGCTTAAGTT................................................... 21 1 1 25.00 25 11 6 7 1
..........................................................................................TTTGTTCGTTTGTCTTAAGTT................................................... 21 1 1 23.00 23 16 7 0 0
..........................................................................................GTTGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 23.00 23 20 0 2 1
..........................................................................................TTTGTTCGTTTGGCTTAATT.................................................... 20 1 1 23.00 23 11 12 0 0
..........................................................................................TTTGTTCGTTTGGCTTGAGTTA.................................................. 22 1 1 22.00 22 14 7 1 0
..........................................................................................TTTGTTCGTTTGGCTTAGGTTA.................................................. 22 1 1 21.00 21 4 8 9 0
..........................................................................................TTTGTTCCTTTGGCTTAAGTTA.................................................. 22 1 1 21.00 21 13 6 1 1
..........................................................................................TTTGTTCGTTTGGCTTAAGTTG.................................................. 22 1 1 21.00 21 13 5 3 0
..........................................................................................TTTGTTCGTTTGCCTTAAGTT................................................... 21 1 1 20.00 20 4 13 3 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAG................................................. 23 1 1 20.00 20 11 8 1 0
..........................................................................................TTTGTCCGTTTGGCTTAAGTT................................................... 21 1 1 20.00 20 9 10 0 1
..........................................................................................TTTGTTCGTTTGGCTCAAGTTA.................................................. 22 1 1 20.00 20 11 9 0 0
..........................................................................................ATTGTTCGTTTGGCTTAAGTT................................................... 21 1 1 20.00 20 18 2 0 0
..........................................................................................TTTCTTCGTTTGGCTTAAGTT................................................... 21 1 1 20.00 20 12 8 0 0
..........................................................................................TTTGTTCGTTTGGCTTAACT.................................................... 20 1 1 19.00 19 0 19 0 0
..........................................................................................TCTGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 19.00 19 12 3 4 0
..........................................................................................TTTGTTCGTTTCGCTTAAGTT................................................... 21 1 1 19.00 19 13 6 0 0
..........................................................................................TTTGTTCGTTTGGCCTAAGTTA.................................................. 22 1 1 19.00 19 9 6 4 0
..........................................................................................TTTGTTCGTTTGACTTAAGTTA.................................................. 22 1 1 19.00 19 11 7 1 0
..........................................................................................TTTGTCCGTTTGGCTTAAGTTA.................................................. 22 1 1 19.00 19 8 8 3 0
..........................................................................................TTTGTTCGTTTGTCTTAAGTTA.................................................. 22 1 1 19.00 19 10 7 2 0
..........................................................................................TTTATTCGTTTGGCTTAAGTT................................................... 21 1 1 19.00 19 9 9 1 0
..........................................................................................TTTGTTCGTTTGGCTTCAGTT................................................... 21 1 1 18.00 18 0 16 1 1
..................................................ACTTGGGCCAAGGGAATGCAAACTT....................................................................................... 25 1 1 18.00 18 2 8 3 5
..........................................................................................GTTGTTCGTTTGGCTTAAGTT................................................... 21 1 1 18.00 18 17 1 0 0
..........................................................................................TTTGTTCGTTTGGCTTAATTTT.................................................. 22 2 1 17.00 17 8 9 0 0
.........................................................................................TTTTGTTCGTTTGGCTTAAGTT................................................... 22 1 1 17.00 17 17 0 0 0
..........................................................................................TTTGTTCGTTCGGCTTAAGTT................................................... 21 1 1 17.00 17 5 12 0 0
..........................................................................................TTTGTTCGTTTGGCTTGAGTT................................................... 21 1 1 16.00 16 6 8 2 0
..........................................................................................TTTGTTCGTTTGGTTTAAGTT................................................... 21 1 1 16.00 16 10 4 2 0
..........................................................................................TTTGTTCGTCTGGCTTAAGTTA.................................................. 22 1 1 16.00 16 6 6 4 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTTA................................................. 23 2 1 16.00 16 14 2 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTATT................................................ 24 0 1 16.00 16 4 10 2 0
..........................................................................................TTTGTTCGTTTGGCTTAAAT.................................................... 20 1 1 16.00 16 0 15 0 1
..........................................................................................TTTATTCGTTTGGCTTAAGTTA.................................................. 22 1 1 16.00 16 11 2 3 0
..........................................................................................TTTGTTCGTTTGGCTTCAGTTA.................................................. 22 1 1 16.00 16 0 12 4 0
..........................................................................................TTTGTTCGTTTGGCTTAAGG.................................................... 20 1 1 16.00 16 14 2 0 0
..........................................................................................TTTGTTCGTTTCGCTTAAGTTA.................................................. 22 1 1 15.00 15 6 4 5 0
..........................................................................................TTTGTTCGTTTGCCTTAAGTTA.................................................. 22 1 1 15.00 15 4 6 5 0
..........................................................................................TTTGTTCGATTGGCTTAAGTTA.................................................. 22 1 1 15.00 15 14 1 0 0
..........................................................................................TTTGTTCGTTTGACTTAAGTT................................................... 21 1 1 15.00 15 7 7 1 0
..........................................................................................TTTGTTCGTCTGGCTTAAGTT................................................... 21 1 1 15.00 15 4 10 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGCTA.................................................. 22 1 1 15.00 15 5 7 2 1
..........................................................................................TTTGTTCGTTTGGCTTAAATTT.................................................. 22 2 1 15.00 15 0 15 0 0
.............................................................................................TTTCGTTTGGCTTAAGTTA.................................................. 19 1 3 14.33 43 31 4 6 2
..........................................................................................TTTGTTCGTTCGGCTTAAGTTA.................................................. 22 1 1 14.00 14 8 6 0 0
..........................................................................................TTTGTTCGTTTAGCTTAAGTT................................................... 21 1 1 14.00 14 6 8 0 0
..........................................................................................TTGGTTCGTTTGGCTTAAGTT................................................... 21 1 1 14.00 14 12 2 0 0
..........................................................................................TTTGTTCGTTTGGCTTAACTTT.................................................. 22 2 1 14.00 14 0 14 0 0
..........................................................................................TTTGTTCGTTTGGCTAAAGTT................................................... 21 1 1 14.00 14 6 7 1 0
..........................................................................................TTCGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 13.00 13 3 8 2 0
.........................................................................................CTTTGTTCGTTTGGCTTAAGTTA.................................................. 23 1 1 12.00 12 8 1 3 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTGT.................................................. 22 2 1 12.00 12 12 0 0 0
.........................................................................................GTTTGTTCGTTTGGCTTAAGTTA.................................................. 23 0 1 12.00 12 12 0 0 0
...........................................................................................TTTTTCGTTTGGCTTAAGTTA.................................................. 21 1 3 11.33 34 31 0 3 0
............................................................................................TTTTCGTTTGGCTTAAGTTA.................................................. 20 1 3 11.00 33 26 4 2 1
..........................................................................................TTTGTTCGTTTGGCTTAA...................................................... 18 0 1 11.00 11 5 0 6 0
...................................................CTTGGGCCAAGGGAATGCAAACT........................................................................................ 23 0 1 11.00 11 9 1 1 0
..........................................................................................TTTGTTCGTTTGGCTAAAGTTA.................................................. 22 1 1 11.00 11 7 0 4 0
..........................................................................................TTTGTTCTTTTGGCTTAAGT.................................................... 20 1 1 11.00 11 8 3 0 0
..........................................................................................TTTGTTCGTGTGGCTTAAGTT................................................... 21 1 1 10.00 10 9 1 0 0
..........................................................................................TTCGTTCGTTTGGCTTAAGTT................................................... 21 1 1 10.00 10 2 7 0 1
..........................................................................................TTTGTTCGTTTGGCTTAAGTC................................................... 21 1 1 10.00 10 2 8 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTTTT................................................ 24 1 1 10.00 10 1 9 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGTTAT................................................. 22 0 1 10.00 10 7 3 0 0
.............................................................................................GTTCGTTTGGCTTAAGTTA.................................................. 19 0 1 10.00 10 8 0 1 1
.........................................................................................CTTTGTTCGTTTGGCTTAAGTT................................................... 22 1 1 10.00 10 7 3 0 0
..........................................................................................TTTGTTAGTTTGGCTTAAGT.................................................... 20 1 1 10.00 10 9 1 0 0
..........................................................................................TTTGTTCGTTTTGCTTAAGT.................................................... 20 1 1 10.00 10 7 3 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTAA.................................................. 22 1 1 10.00 10 4 6 0 0
..........................................................................................TTTGTTCGTTTGTCTTACGTT................................................... 21 2 1 10.00 10 10 0 0 0
...........................................................................................TTTTTCGTTTGGCTTAAGTT................................................... 20 1 5 9.20 46 43 3 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGTTG.................................................. 21 1 1 9.00 9 9 0 0 0
..............................................................................................TTCGTTTGGCTTAAGTTA.................................................. 18 0 1 9.00 9 7 2 0 0
..........................................................................................TTTGTTCGTTTGGCTGAAGTT................................................... 21 1 1 9.00 9 9 0 0 0
....................................................TTGGGCCAAGGGAATGCAAACT........................................................................................ 22 0 1 9.00 9 0 4 5 0
..........................................................................................TTTGTTCGTTTGGCGTAAGTTA.................................................. 22 1 1 9.00 9 9 0 0 0
.................................................TACTTGGGCCAAGGGAATGCAAACT........................................................................................ 25 0 1 9.00 9 0 1 8 0
..........................................................................................TTTGCTCGTTTGGCTTAAGT.................................................... 20 1 1 9.00 9 6 3 0 0
..........................................................................................TTTGTTCATTTGGCTTAAGTTA.................................................. 22 1 1 8.00 8 0 3 5 0
............................................................................................TGTTCGTTTGGCTTAAGTTT.................................................. 20 1 1 8.00 8 7 1 0 0
..........................................................................................TTTGATCGTTTGGCTTAAGTT................................................... 21 1 1 8.00 8 5 3 0 0
...........................................................................................TTGTTCTTTTGGCTTAAGTT................................................... 20 1 1 8.00 8 6 2 0 0
.........................................................................................ATTTGTTCGTTTGGCTTAAGTT................................................... 22 1 1 8.00 8 8 0 0 0
..........................................................................................TTTGTTCTTTTGGCTTAAGTTT.................................................. 22 2 1 8.00 8 5 3 0 0
..........................................................................................TTTGTTCGTTTGGCATAAGTTA.................................................. 22 1 1 8.00 8 4 0 4 0
...........................................................................................TTGTTCGTTTGGCTTAAGTTTT................................................. 22 1 1 8.00 8 7 1 0 0
.............................................................................................TTTCGTTTGGCTTAAGTT................................................... 18 1 5 7.60 38 19 16 2 1
..........................................................................................TTTGTTCGTTTGGCTTACGTTT.................................................. 22 2 1 7.00 7 7 0 0 0
.........................................................................................TTTTGTTCGTTTGGCTTAAGTTA.................................................. 23 1 1 7.00 7 7 0 0 0
.........................................................................................GTTTGTTCGTTTGGCTTAAGTT................................................... 22 0 1 7.00 7 7 0 0 0
..........................................................................................TTGGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 7.00 7 6 0 1 0
.............................................................................................GTTCGTTTGGCTTAAGTT................................................... 18 0 1 7.00 7 6 1 0 0
..........................................................................................TTTGTACGTTTGGCTTAAGTT................................................... 21 1 1 7.00 7 4 1 0 2
............................................................................................TTTTCGTTTGGCTTAAGTT................................................... 19 1 5 6.60 33 27 5 1 0
..........................................................................................TTTGTTCGTTTGGCTTTAGTT................................................... 21 1 1 6.00 6 2 3 1 0
..........................................................................................TTTGGTCGTTTGGCTTAAGTTA.................................................. 22 1 1 6.00 6 5 1 0 0
..........................................................................................TTTGTTCATTTGGCTTAAGTT................................................... 21 1 1 6.00 6 0 6 0 0
..........................................................................................TTTGTTCGTTTGGATTAAGTT................................................... 21 1 1 6.00 6 0 6 0 0
..........................................................................................TTTGTTCGTTTGGCTTACGT.................................................... 20 1 1 6.00 6 5 1 0 0
..................................................ACTTGGGCCAAGGGAATGTAAACT........................................................................................ 24 1 1 6.00 6 0 2 4 0
..........................................................................................TTTGTGCGTTTGGCTTAAGTT................................................... 21 1 1 6.00 6 6 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGC.................................................... 20 1 1 6.00 6 1 5 0 0
..........................................................................................TTTGTTCGTTTGGGTTAAGTT................................................... 21 1 1 6.00 6 4 2 0 0
..........................................................................................TTTGTTCGTTCGGCTTAAGT.................................................... 20 1 1 6.00 6 0 4 1 1
..........................................................................................TTTCTTCGTTTGGCTTAAGT.................................................... 20 1 1 6.00 6 0 6 0 0
..................................................ATTTGGGCCAAGGGAATGCAAACT........................................................................................ 24 1 1 6.00 6 0 0 6 0
..........................................................................................TTTGGTCGTTTGGCTTAAGTT................................................... 21 1 1 6.00 6 3 3 0 0
..........................................................................................TTTTTTCGTTTGGCTTAAGT.................................................... 20 1 1 6.00 6 3 3 0 0
..........................................................................................TTTGTTCGTTTAGCTTAAGTTA.................................................. 22 1 1 6.00 6 3 2 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA............................................... 25 3 1 6.00 6 2 2 2 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTCA.................................................. 22 1 1 6.00 6 0 3 2 1
..........................................................................................TTTGTTCGTTTGTCTTACGTTA.................................................. 22 2 1 6.00 6 6 0 0 0
..........................................................................................TTTGTTCGTTTGGCATAAGTT................................................... 21 1 1 6.00 6 4 0 2 0
..........................................................................................TTTGTTCGCTTGGCTTAAGT.................................................... 20 1 1 6.00 6 2 4 0 0
..........................................................................................TTTGTTCGTTTGGCTTAACTTAT................................................. 23 1 1 6.00 6 0 6 0 0
..........................................................................................TTTGTTCGTTTGGCTTATGTTA.................................................. 22 1 1 6.00 6 3 1 1 1
..........................................................................................TTTGTTCGTTTGGCTTAAGAA................................................... 21 2 1 5.00 5 0 5 0 0
..................................................ACTTGGGCCATGGGAATGCAAACT........................................................................................ 24 1 1 5.00 5 0 0 5 0
..........................................................................................TTTGTTCGTTTGGCTTAAGATA.................................................. 22 1 1 5.00 5 5 0 0 0
..................................................ACTTGGGCCAAGGGAATGAAAACT........................................................................................ 24 1 1 5.00 5 0 5 0 0
..........................................................................................TTTGTTCGTTTTGCTTAAGTTT.................................................. 22 2 1 5.00 5 4 1 0 0
..................................................ACTTGGGCCAAGGGAATGCAAACA........................................................................................ 24 1 1 5.00 5 1 3 1 0
...........................................................................................TTGTTCGCTTGGCTTAAGTT................................................... 20 1 1 5.00 5 5 0 0 0
..........................................................................................TTTGTTCGTTTGGATTAAGTTA.................................................. 22 1 1 5.00 5 0 4 1 0
..........................................................................................TTTGTTCGGTTGGCTTAAGTTA.................................................. 22 1 1 5.00 5 2 2 1 0
..........................................................................................TTCTTTCGTTTGGCTTAAGTT................................................... 21 2 1 5.00 5 4 0 1 0
............................................................................................TGTTCGTTTGGCTTAAGT.................................................... 18 0 1 5.00 5 5 0 0 0
...........................................................................................TTGTTCGTTTGGCTTTAGTTA.................................................. 21 1 1 5.00 5 5 0 0 0
..........................................................................................TTTGTTCGTTAGGCTTAAGTTA.................................................. 22 1 1 5.00 5 4 0 1 0
..........................................................................................TTTGTTCGTTTGGCTGAAGTTA.................................................. 22 1 1 5.00 5 4 0 1 0
..........................................................................................TTTGTTCGTTTGGCTTAACTTAA................................................. 23 2 1 5.00 5 0 5 0 0
..........................................................................................TTTGTTGGTTTGGCTTAAGTTA.................................................. 22 1 1 5.00 5 2 3 0 0
..................................................ACTTGGGCCAAGGGAATGCAT........................................................................................... 21 1 1 5.00 5 0 4 0 1
..........................................................................................TTTGTTCGGTTGGCTTAAGTT................................................... 21 1 1 5.00 5 3 2 0 0
..........................................................................................CTTGTTCGTTTGGCTTAAGT.................................................... 20 1 1 5.00 5 1 4 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGTTAC................................................. 22 1 1 5.00 5 3 1 0 1
..................................................ACTTGGGCCAGGGGAATGCAAACT........................................................................................ 24 1 1 4.00 4 0 0 4 0
..........................................................................................TTTGTTCGCTTGGCTTAAGTTT.................................................. 22 2 1 4.00 4 3 1 0 0
.................................................TACTTGGGCCAAGGGAATGCAA........................................................................................... 22 0 1 4.00 4 1 2 1 0
..........................................................................................TTTGTTCGTTTGGCTTTAGTTA.................................................. 22 1 1 4.00 4 0 3 1 0
..................................................ACTTGGGCCAAGGGAATG.............................................................................................. 18 0 1 4.00 4 0 1 2 1
..........................................................................................TTTGTACGTTTGGCTTAAGTTA.................................................. 22 1 1 4.00 4 3 1 0 0
...........................................................................................TTGTTCGTTTGTCTTAAGTT................................................... 20 1 1 4.00 4 4 0 0 0
..........................................................................................TTTGTTCGATTGGCTTAAGTTT.................................................. 22 2 1 4.00 4 4 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTACGTTAA................................................. 23 2 1 4.00 4 3 1 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGTG................................................... 20 1 1 4.00 4 4 0 0 0
..................................................ACTTGGGCCAAGGGAATGCAACT......................................................................................... 23 2 1 4.00 4 0 0 4 0
..........................................................................................TTTGATCGTTTGGCTTAAGTTA.................................................. 22 1 1 4.00 4 1 3 0 0
..........................................................................................TTTGTTCGTTTGGATTAAGT.................................................... 20 1 1 4.00 4 0 4 0 0
..........................................................................................TTTGTTCGTTTGGCTTAATTTAT................................................. 23 1 1 4.00 4 1 3 0 0
..................................................ACTTGGGCTAAGGGAATGCAAACT........................................................................................ 24 1 1 4.00 4 0 0 4 0
..........................................................................................TTTGTTCGTTTGTCTTAAGT.................................................... 20 1 1 4.00 4 3 1 0 0
..........................................................................................TTTGTTCGTTTGGCTTAGGTTAA................................................. 23 2 1 4.00 4 1 2 0 1
..........................................................................................TATGTTCGTTTGGCTTAAGTTA.................................................. 22 1 1 4.00 4 4 0 0 0
..........................................................................................TTTGTTGGTTTGGCTTAAGTT................................................... 21 1 1 4.00 4 2 1 1 0
...........................................................................................TTGTTCGTTTGGCTTAATTT................................................... 20 1 2 4.00 8 8 0 0 0
..........................................................................................TTTGTTCGTGTGGCTTAAGTTA.................................................. 22 1 1 4.00 4 4 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAC..................................................... 19 1 1 4.00 4 1 3 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGCTAA................................................. 23 2 1 4.00 4 1 3 0 0
..........................................................................................TTTGTTCGTTTGGCCTAAGTTT.................................................. 22 2 1 4.00 4 2 2 0 0
..........................................................................................TTTGTTAGTTTGGCTTAAGTTT.................................................. 22 2 1 4.00 4 4 0 0 0
...........................................................................................TTGATCGTTTGGCTTAAGTT................................................... 20 1 1 4.00 4 4 0 0 0
...........................................................................................TTGATCGTTTGGCTTAAGTTA.................................................. 21 1 1 4.00 4 4 0 0 0
..........................................................................................CTTGTTCGTTTGGCTTAAGTTT.................................................. 22 2 1 4.00 4 2 2 0 0
...........................................................................................TTGTTCGCTTGGCTTAAGTTA.................................................. 21 1 1 4.00 4 4 0 0 0
..........................................................................................TTTGTTCTTTTGGCTTAAG..................................................... 19 1 1 4.00 4 2 1 0 1
...........................................................................................CTGTTCGTTTGGCTTAAGTTA.................................................. 21 1 1 4.00 4 3 1 0 0
..........................................................................................TTTGTTCGTTTGGCTTAGGT.................................................... 20 1 1 3.00 3 1 2 0 0
...........................................................................................TTGTTCGTTTGGCTAAAGTT................................................... 20 1 1 3.00 3 3 0 0 0
...........................................................................................TTGTTCTTTTGGCTTAAGTTA.................................................. 21 1 1 3.00 3 3 0 0 0
..................................................ACTTGGGCCAAGGGAATGCGAACT........................................................................................ 24 1 1 3.00 3 0 2 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTCT.................................................. 22 2 1 3.00 3 0 3 0 0
..................................................ACTTGGGCCAAGGGAATGCAAGCT........................................................................................ 24 1 1 3.00 3 0 0 3 0
...........................................................................................TGGTTCGTTTGGCTTAAGTTA.................................................. 21 1 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTCGTTGGGCTTAAGTT................................................... 21 1 1 3.00 3 1 2 0 0
..........................................................................................TTTGTTCGTTTGGTTTAAGT.................................................... 20 1 1 3.00 3 1 1 1 0
.........................................................................................ATTTGTTCGTTTGGCTTAAGTTA.................................................. 23 1 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTTGTTTGGCTTAAGT.................................................... 20 1 1 3.00 3 2 1 0 0
..........................................................................................TTCTTTCGTTTGGCTTAAGTTA.................................................. 22 2 1 3.00 3 1 1 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAGGTC.............................................. 26 3 1 3.00 3 0 1 2 0
..................................................ACTTGGGCCAAGGGAATGCAAACTA....................................................................................... 25 1 1 3.00 3 0 1 1 1
...........................................................................................TTGCTCGTTTGGCTTAAGTT................................................... 20 1 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAAG................................................ 24 2 1 3.00 3 0 3 0 0
..........................................................................................TTTGTCCGTTTGGCTTAAGT.................................................... 20 1 1 3.00 3 2 1 0 0
.................................................TACTTGGGCCAAGGGAATGCA............................................................................................ 21 0 1 3.00 3 0 3 0 0
..................................................ACTTGGGTCAAGGGAATGCAAACT........................................................................................ 24 1 1 3.00 3 0 0 3 0
..........................................................................................TTTGTGCGTTTGGCTTAAGTTA.................................................. 22 1 1 3.00 3 2 0 1 0
.................................................TACTTGGGCCAAGGGAATGCAAAC......................................................................................... 24 0 1 3.00 3 1 1 0 1
..........................................................................................TTTGTTCGATTGGCTTAAGGT................................................... 21 2 1 3.00 3 3 0 0 0
.................................................TACTTGGGCCAAGGGAATGC............................................................................................. 20 0 1 3.00 3 0 2 1 0
..........................................................................................TTTGTTCGTTTGGCTTAAGAT................................................... 21 1 1 3.00 3 3 0 0 0
..........................................................................................TCTGTTCGTTTGGCTTAAGT.................................................... 20 1 1 3.00 3 1 2 0 0
..........................................................................................TTTGTTCGTTTGGCGTAAGTT................................................... 21 1 1 3.00 3 3 0 0 0
..................................................ACTTGGGCCAAGGGAATCCAAACT........................................................................................ 24 1 1 3.00 3 0 2 1 0
..........................................................................................TTTGTTCGTTTGGCGTAAGT.................................................... 20 1 1 3.00 3 3 0 0 0
...........................................................................................TTGTTCGTTCGGCTTAAGTTA.................................................. 21 1 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAT..................................................... 19 1 1 3.00 3 2 1 0 0
..........................................................................................TTTGTTGTTTTGGCTTAAGTTA.................................................. 22 2 1 3.00 3 3 0 0 0
..................................................ACTTCGGCCAAGGGAATGCAAACT........................................................................................ 24 1 1 3.00 3 1 0 2 0
..................................................ACTTGGGCCACGGGAATGCAAACT........................................................................................ 24 1 1 3.00 3 0 0 3 0
...........................................................................................TTGTTCGTTTGGCTTAAGGT................................................... 20 1 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGGTT.................................................. 22 2 1 3.00 3 3 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTAATT............................................... 25 1 1 3.00 3 0 3 0 0
..........................................................................................TTTTTTCGTTTGGCTTAAGTTT.................................................. 22 2 3 2.67 8 8 0 0 0
..........................................................................................TTTCTTCGTTTGGCTTAAGTTT.................................................. 22 2 2 2.50 5 1 4 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAA..................................................... 19 1 2 2.50 5 3 1 0 1
...........................................................................................TCTTTCGTTTGGCTTAAGTTA.................................................. 21 2 4 2.25 9 6 1 2 0
...........................................................................................TTTTTCGTTTGGCTTAAGT.................................................... 19 1 5 2.20 11 10 1 0 0
..........................................................................................TTTGCTCGTTTGGTTTAAGTT................................................... 21 2 1 2.00 2 2 0 0 0
............................................................................................TGTTCGTTTGGCTTAAGTTAT................................................. 21 0 1 2.00 2 2 0 0 0
...........................................................................................TTGTTCGTTTGGCTTAAGCTA.................................................. 21 1 1 2.00 2 1 1 0 0
..................................................ACTTGGGCAAAGGGAATGCAAACT........................................................................................ 24 1 1 2.00 2 0 0 2 0
..........................................................................................TTGGTTCGTTTGGCTTAAGTTT.................................................. 22 2 1 2.00 2 2 0 0 0
..........................................................................................TTTGTTCGTTTGGCTCAAG..................................................... 19 1 1 2.00 2 1 1 0 0
..........................................................................................TTTGTTCGTTTGACTTAAGTTT.................................................. 22 2 1 2.00 2 1 1 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTTG................................................. 23 2 1 2.00 2 2 0 0 0
...........................................................................................TTGTTCGCTTGGCTTAAGTTAA................................................. 22 2 1 2.00 2 2 0 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTGG................................................. 23 2 1 2.00 2 2 0 0 0
...........................................................................................TTGTTCGTATGGCTTAAGTTA.................................................. 21 1 1 2.00 2 2 0 0 0
..................................................ACCTGGGCCAAGGGAATGCAAACT........................................................................................ 24 1 1 2.00 2 0 0 2 0
...........................................................................................TTGTTCGTTTCGCTTAAGTT................................................... 20 1 1 2.00 2 2 0 0 0
..........................................................................................TTTATTCGTTTGGCTTAAGTTT.................................................. 22 2 1 2.00 2 2 0 0 0
..................................................ACTTGGGCCAAGGGAATGCAACCT........................................................................................ 24 1 1 2.00 2 0 0 2 0
.........................................................................................TTTTGTTCGTTTGGCTTAAGTTAA................................................. 24 2 1 2.00 2 2 0 0 0
..........................................................................................TTTGTTCGTTTCGCTTAAGT.................................................... 20 1 1 2.00 2 0 2 0 0
...........................................................................................TGGTTCGTTTGGCTTAAGTT................................................... 20 1 1 2.00 2 2 0 0 0
..........................................................................................TCTGTTCGTTTGGCTTAAGTTT.................................................. 22 2 1 2.00 2 1 1 0 0
..........................................................................................TTTGTTCGTTTGGCTTAAGTTCA................................................. 23 2 1 2.00 2 1 1 0 0
............................................................................................TGTTCGTTTGACTTAAGTTA.................................................. 20 1 1 2.00 2 2 0 0 0
..........................................................................................TTTGCTCGTTTGGCTTAAGTTT.................................................. 22 2 3 2.00 6 5 1 0 0
..........................................................................................TGTGTTCGTTTGGCTTAAGTTAA................................................. 23 2 1 2.00 2 2 0 0 0
..........................................................................................TTTGTTAGCTTGGCTTAAGTTA.................................................. 22 2 1 2.00 2 2 0 0 0
...........................................................................................GTGTTCGTTTGGCTTAAGTT................................................... 20 1 1 2.00 2 2 0 0 0
..................................................ACTTGGGCCAAGGAAATGCAAACT........................................................................................ 24 1 1 2.00 2 0 0 2 0

Anti-sense strand reads

CACATCGATGAGGCGGACCTCGGTAGGCTTAGGGAGGGCCCGTCGCTTAATGAACCCGGTTCCCTTACGTTTGACACTAGTAGGGCTTTCAAACAAGCAAACCGAATTCAATAAAAGTACAGGCTGATTTCGCGGTGCACCATCTCTAGCCTAGCCTAGCTT

************************************..((((((..((((.((((((((((((.((..(((((((..............))))))))).)))))))))))).))))...))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body

 V115

head
.....................GGTAGGCGAAGGGAGGGCC.......................................................................................................................... 19 2 2 2.50 5 3 2 0
....................GGGTAGGCGAAGGGAGGGCC.......................................................................................................................... 20 3 6 1.50 9 4 5 0
..........................................TCGCTTGATGAACCCGGTTCC................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................................................................CCATAAAAGTACAGGCTGCGT................................. 21 3 1 1.00 1 1 0 0
.........................................................................................................................GGCTGATTTCGCGGTGCACC..................... 20 0 1 1.00 1 1 0 0
......................GTAGGCGAAGGGAGGGCC.......................................................................................................................... 18 2 3 0.67 2 0 1 1
.....................GGTAGGCGAAGGGAGGGC........................................................................................................................... 18 2 8 0.50 4 2 2 0
....................GGGTAGGCTAAGGGAGGGCC.......................................................................................................................... 20 2 2 0.50 1 1 0 0
.....CGATGGGGCGGACTTGGGTA......................................................................................................................................... 20 3 3 0.33 1 0 0 1
..........................................................ATCCCCTTACGTTTGTCACTA................................................................................... 21 3 5 0.20 1 0 1 0
.....................GGTAGGTGAAGGGAGGGCC.......................................................................................................................... 19 3 20 0.05 1 0 1 0
....................GGGTAGGCGGAGGGAGGGC........................................................................................................................... 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_14:828139-828300 + dse_12 confident GTGTAGCT-ACTC---CGC---CTGGAGCCATC-------------------------------------------------------------CG-------AATCCCTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TAGAGATCG----------GA-TCG------GATC-GAA--
droSim2 2l:820290-820451 + dsi-mir-375 Known_mirbase GTGTAGCT-ACTC---CGC---CTGGAGCCATC-------------------------------------------------------------CG-------AATCCCTACCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TAGAGATCG----------GA-TCG------GATC-GGA--
dm3 chr2L:857504-857657 + dme-mir-375 Known_mirbase GTGTAGCT-ACTC---CGA--CATGGAGCCATC---------------------------------CGAA----------------------------------ACCCCTTCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TGGAGATCG----------GA--------------------
droEre2 scaffold_4929:914675-914831 + der_8 confident GTGTAGCT-GCTT---CGC--CTTGGAGCCACC-------------------------------------------------------------AC-------CATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATGC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTCG--------AGGAGATCC----------GA-TCG------GATT-GGA--
droYak3 2L:841532-841700 + dya_17 confident GTGTAGCT-ACTC---CGCTCCATGGAGCCATC-------------------------------------------------------------CG-------AGTC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATGC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TGGAGATCGTTTCTAATCGGA-TCG------GATT-GGA--
droEug1 scf7180000409554:1584247-1584403 + GTGTAACT-ACTC---CTG--CGTGGA-CTATC-------------------------------------------------------------AC-------TATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------------TTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT----------TAAATCGCCACGTGG--------TGGAGATCA----------AA-TCG------GATCTATA--
droBia1 scf7180000302261:2955868-2956021 - GTGTAACT-GCTC---CT-----CGCAGACGGC-------------------------------------------------------------GG-------AGTC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TAAAGCGCCACGTGG--------TGGAGATCG--------------CG------GCTCTGCACT
droTak1 scf7180000415856:522985-523128 + GTGGAGTG-GTTT------------------------------------------------------AA-------------------------AG-------TATCCCTTTGGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTG---ATCG-----------------CTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TTAAAGGCCACGTG---------TGAAGTTAG----------GA-TCG------GTTT------
droEle1 scf7180000490458:433868-434022 - GTGTAACTAACTCCTTCA--------------------------------------------------AAA---------------------------------------AAGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTA---ATTG-----------CAA-TGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGAT----------TTAAACGCCACGTGG--------TGGAGATCG----------GGAGTAGTTCTGGTTC------
droRho1 scf7180000769144:95335-95490 - GTGTAACT-CCTT---CAA--C---GAACTATC-------------------------------------------------------------AG-------TATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTT---TTCG-----------CAC-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGAT----------TTAAACGCCACGTGG--------TGGAGATCG----------GT-TCG------GTTC------
droFic1 scf7180000453904:1127906-1128056 + GTGTAACT-CCTT---CG-----TGGAACCACC-------------------------------------------------------------AG-------ATCC----CCGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTG---ATCG-----------CA---GCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TTAAGCGCCACGTGG--------TGG-GAT----------------CG------GATT-GTC--
droKik1 scf7180000301725:150172-150345 - GTGTAACCC------------------------------------A-----GAGAT--ACTTTA------------------------------------------CTCTTCGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------CAATTACCAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAAAAACACACAGACAAACGCCACGTGGTTGATCCGTGGAGATCG----------GT-TTC------GGTT-TCA--
droAna3 scaffold_12916:2746963-2747141 + dan_11 confident GTGTAACC-AATG---TG----ATGGAGCTCCC------------ACGGAAAAGA--CACCCCACGGAAAC---------------------------------------GAGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTG---ATCG-----------CAA-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTT----------GCAAACGCCACGTGG--------TGGAGATCG----------CT-CCA------GCTC-CAA--
droBip1 scf7180000396737:2017532-2017706 - GTGTAACC-AAAG---TTG---GTGGAGCTCCC------------A-----GAGA--CACCCCACGGAAAC---------------------------------------GAGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------CAA-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTT----------GCAAACGCCACGTGG--------TGGAGATCG----------CC-CCA------GACC-CAA--
dp5 4_group3:5649056-5649227 + dps-mir-375 Known_mirbase GTGTAACCC------------------------------------A-----GAGATGCACTGCATCCAAGGCCTGTGCCTGTGTCTGAGAGCCCACCCACCCGAA------TAGGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTG---ATCG-----------CAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAA----------GTAAACGCCACGTGG-------------------------------------------------
droPer2 scaffold_1:7140214-7140385 + dpe_13 confident GTGTAACCC------------------------------------A-----GAGATGCACTGCATCCAAGGCCTGTGCCTGTGCTTGAGAGCCCACCCACCCGAA------TAAGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTG---ATCG-----------CAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAA----------GTAAACGCCACGTGG-------------------------------------------------
droWil2 scf2_1100000004585:2278798-2278970 - dwi_19 confident GTGTAAAAC-ACT---TGC--TAAAAAAAAATTTAAAACCGTTT-----------TCCATT---------------------------------TC--------ATTTTTTGGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTG---AATT-----ATTTCAAAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTAC---------AATTGCGACACGTGG--------TGAAG------------------------------------
droVir3 scaffold_12963:19405348-19405511 + dvi-mir-375 Known_mirbase TTATATTT-ATTG---AC----CAGGTGTCTCT-----------CAGTGCG-CGGTACGCTCCATTCAAAG---------------------------------------TTCGGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTC---AACG-----------CAT-TGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCAAC-----------ATAACGCCACGTGG--------TGGAG------------------------------------
droMoj3 scaffold_6500:23808219-23808357 - dmo_4 confident ATTTTCCT-GTTC---AG-----TGTATGC----------------------------------------------------------------------------TCCTGCAGGGCTGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTCGAAAAG-----------CAT-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------AAAACGCCACGTGG--------TGG--------------------------------------
droGri2 scaffold_15252:7270316-7270447 + dgr_76 confident GTGTATTT-GGT------------GGG------------------------------------------------------------------------------------GCGGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTG---AAAGCGCATTTTGCATAT-AACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------ATAACGCCACGTGG-------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GTGTAGCT-ACTC---CGC---CTGGAGCCATC-------------------------------------------------------------CG-------AATCCCTCCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TAGAGATCG----------GA-TCG------GATC-GAA--SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21131577.003157717403124691229476
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22127821.00278211662378433003352
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2014042.0040421641220811479
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2212943.002943137415231828
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2411740.00174063335131428
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111530.001530142073361
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2011430.001430136052144
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2311028.0010285044426220
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................191653.006534111882430
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231359.00359169168193
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211124.001241111300
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191115.00115109420
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................21195.009593200
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................23190.00901120554
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................21177.0077557105
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20177.007770241
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................24176.00761252102
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19163.006361020
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................22157.0057535152
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................20154.00541024191
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22146.004641500
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22141.0041132521
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................19135.003538222
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23135.0035111752
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21133.0033211101
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18132.003231100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20129.0029111503
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22121.002113530
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23120.002011810
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................25118.00182835
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23116.001614200
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24116.001641020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................20116.001614200
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT........................................................................................22112.001212000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23112.001212000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18111.00115060
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................23111.00119110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................21110.00102800
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22110.00107300
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19110.00108011
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTG........................................................................................2119.0099000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1819.0097200
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................2219.0090450
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2519.0090180
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2018.0087100
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2217.0077000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................1817.0076100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................2016.0061500
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................2516.0062220
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAA.........................................................................................2115.0050500
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACA................................................................................................................................................2415.0051310
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................1815.0055000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................2115.0050401
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC.......................................................................................2215.0053101
............................................................................................................................TACTTGGGCCAAGGGAATGCAA...................................................................................................................................................2214.0041210
.............................................................................................................................ACTTGGGCCAAGGGAATG......................................................................................................................................................1814.0040121
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTG.........................................................................................2014.0044000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAACT.................................................................................................................................................2314.0040040
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAC...........................................................................................1914.0041300
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................2213.0030300
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTA...............................................................................................................................................2513.0030111
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG......................................................................................2413.0030300
............................................................................................................................TACTTGGGCCAAGGGAATGCA....................................................................................................................................................2113.0030300
............................................................................................................................TACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................2413.0031101
............................................................................................................................TACTTGGGCCAAGGGAATGC.....................................................................................................................................................2013.0030210
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................1913.0032100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1922.5053101
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2112.0022000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG.......................................................................................2312.0022000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2312.0022000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA.......................................................................................2312.0021100
droSim2
GTGTAGCT-ACTC---CGC---CTGGAGCCATC-------------------------------------------------------------CG-------AATCCCTACCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TAGAGATCG----------GA-TCG------GATC-GGA--SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21161692.0061692195830051237059673244100244189385396401474216410252599
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22155802.0055802698970332984120102233452282585777272143292249053926110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................20113460.001346047883742065961374424432322847021815948
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1917728.007728233497750124174851116815524802421
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2313808.003808921931232240003027926411241075125
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2212826.00282644154423523009311024670002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................2411167.001167498481317007115803098000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................1811077.00107781660884524111000021011
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111009.00100914321338313112069051258001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231983.009831738418458761022011416111
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................201769.0076991227465801214402171000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................201749.00749346981250000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................241538.005381144931010001370098000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................201381.0038125351410000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................201368.00368283151700210000014000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................211241.00241182021900000010001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................231140.0014069817200003201010001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191116.0011621714547000000004000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................211108.001081617340000000005000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21198.009845211500110000024000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22178.0078357090000100008000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18175.0075070560200000001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22168.00682304900100000022000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................21153.00530603400000000013000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAA.........................................................................................21149.0049148000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................19246.5093478010001000009000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23141.0041030230000100104000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24140.0040122613000000007000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................25139.00391134000011000019000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................23138.00382210410000017011000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19135.0035042272000000000000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................18134.0034491910010000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20133.00330221910000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22126.0026060160000000004000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAC...........................................................................................19126.0026224000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22125.0025020130000000019000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................19122.0022219010000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................24118.001808700000200001000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18114.001404052000003000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................21112.001200010020000306000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19111.001102017000001000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA......................................................................................24110.001017100000000001000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................2219.00900000000000702000
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................2019.00900011010000501000
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................2218.00813200000000101000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................2318.00806000000000002000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTAA.......................................................................................1917.00704300000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCT...............................................................................................1527.001400000010148000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT........................................................................................2216.00605000000000001000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2316.00603200000000001000
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................1915.00501003000000100000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................2215.00504010000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTA.............................................................................................1714.00400000000300001000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................2514.00400000000000301000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2214.00400040000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................2114.00400000000000004000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT........................................................................................2214.00402020000000000000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................2314.00400040000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC.......................................................................................2214.00402000000000002000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTAC........................................................................................2214.00404000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAAA..........................................................................................2053.4017115000000000001000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACC................................................................................................................................................2413.00301000000000200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAG............................................................................................1813.00303000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTAG........................................................................................2213.00301000000000002000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGGG.........................................................................................2113.00303000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTG.........................................................................................2013.00300030000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG......................................................................................2413.00300000010000002000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2513.00300000000000300000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTT..............................................................................................1613.00300000000011001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA......................................................................................2422.50514000000000000000
dm3
GTGTAGCT-ACTC---CGA--CATGGAGCCATC---------------------------------CGAA----------------------------------ACCCCTTCCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATC--------------A-TCCCGAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TGGAGATCG----------GA--------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................211153585.0015358500001260008288220000000078637031161013041414201322141921229262466000032371700000000000000000321341505010053332397186122253759202794663067003211293235111531858446602622912260598121850103910116200106001022319078041000005501102303260261015047110138680216781806001421339756893351640009964107871170200313816770541114102201311178489479372042811041363382300475004423201486208205525203147212400239001002013550110108694122811882512302111158171174257281894217299192588151330982619902975308934011157126662221300214061104203132191352657515765675811445110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................221100626.001006260000247103335737480000010051076702034381615644281110134649142111768400010384340000000000000000053123142706820012675496142915983561600142589873581032020445690173541689257129190151642107251299711015101513010169505243683129700000000040250250030863496284216946481322171000140593732474271064105415866252704000107660044434000130279804566209491051452371121001259003714300104973203731803122461117570501135000000062214302137931152188823175001111271169823316184453192140112143013433213129169933469647031196102251241920009651378913175031998336444773132620237
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................20124344.0024344000004000020400000000003901000212484180010100304040343000000300000000000000000000010300000055180352351121018301211001007402201809603020007417181110220000010010000120350032000000000001930017001057314016025010000026192968993240001398066700100079201001100024383661521416237924100533004230084502001073031402000800000003000500001213852521800000302927494112324137144923632339178901248178900249392420000310018493936581040151711921531201030
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2418870.00887000001100353110000000000000001000000110000000011003010000000000000000000000000000031124680006029006313443073384000000331712016000000101000000000000000304190000004050000000000000240300061112033000002518250254005302335020008800000000134206810441311126500001000203166039100018602390100080000000100000002147161500000734772348112430283166152480364320021011174610002043100829239924944276941057150510
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1917693.007693000000000000000000000012700003338110000000010001000000000030000000000000000000000010000002220110102700540100001111010002000000101644951012000005000000000040000000000000003501002833320650010006561201787000397016000000110000000000915190950011000000005100147041000013711800100020010000001001001622306111000007129210138034017572167532040454300351410000000010542111467379412390484000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2216079.0060790000000001000000000000012000000000000001000100000000000000000000000000000000000000000200021100007330043018000001110001200100030002016600000000000000000000500000000000000017130120031316010015100000721612126700013921870000017600000000057301324993122400005200430111010029006301000000000000010100003142001000001191118045753102373133124030212382001061311000000000814191407231276318350000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2314461.00446100000200006110000000000180000000000000000020010020101000000000000000000000000000011000000251611612879204229340000309102102202003000302094000100040000000000002000000000000000121701200254215050200020011215149810001200134000000340000000002834161061108154600016944001716022010008013301000100000002000000041411015114000001112111421691397309722141734003692720010410000000000001921451169187231211000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC......................................................................................2413896.003896000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000022951599000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................2112048.0020480000000000110000000000010100000000000000000000000001000000000000000000000000000020005010701401132225013719000002130002000000000000000000000000000000000040000000000000000001001000000000000012408220002501000000000300000161003319560001001000000000330900000120150000010000100000000000111021100000521341910511213158601028600153011000000001247309142122271225000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................2311470.0014700000000001001000000000020000000000000000000000000000000074100000000000000000000000000000004001022100671200000004100701100000200030000000000000000000000000000000000000540100041211010320000045534220003906400000030000000000441334156362100001114900102030000010001200000100000000000000010000100000008333039412102151034107056660002100000000000102315533586773000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................221980.009800000000000010000000000010000000000100000000000000000000000000000000000000000000000000000305004007010620000003001203000000000000000000000000000000000010000000000000000000000200000000000001204310005034000000120000000001271700000001000000003801000004003000001000000000000000001400000000002101188104082232026310021201100020000933188956511087000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................201894.008940000000000000000000000000000000000170000000000000100000000000000000000000000000000000000041500214600030100000100000100000000000000000000000000000000000000000000000000000000000000000000000803200002015000000000000000000281900001000000000004302000004007000000000000000000000000301000000031001672060002230373400114011000000006711246397143111000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................211857.008570000000000201000000000080000000000000000000000000000000055100000000000000000000000020000215014051730126010000002107060010000000303010000000000000000000000000000000000024062011814401314000000361551000470510000000260000000023510000220010000010013140300000000200000000000000000000001010600000000222141176090341260264200315001000000003637917264528100000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................201682.0068200000000000000000000000200000251401000000000000000000000010000000000000000000000000000000000000013001101000000111103011020100020010000000000000000000000000000000000005802000162500000000003490410000270340000000000000000000760000010000000000340200000300500000100000000000000000010001000002003054101301122303253002000000000000048410618263431000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTATC.......................................................................................231446.004460000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262184000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................231441.00441000000000100000000000000000000000000000000000000000000000000000000000000000000000008000000200100000000200000013010101000000000000000010000030100100005000000000000000100000001000000000000191251000201200000002000000000516100021020100001000670410000800400000000000000000000001020000000002000284101130170101600001010000000003205021356224010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................241392.003920000000000010000000000000000000000000000000000000000000010000000000000000000000000010000002000001001100000000000000000000000000100000000000000000000000000000000000000100000300000000000004501100003029000000000000000000430121201120000310043040000030020000000000000000000000101000100000000527219901000001502770000000000000100190154141417000010
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................221374.00374000002000000000000000002000000000000000000000000010000000000000000000000000000000000100000100001200010000000010000003000000004028600000000000000000000000000000000000011010000000000000000062900009050000000100000000001010000000000001870012010000040010000000000000000000000201000300000102001913111321519502521000020000000000090144195000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241352.00352000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000101100000000000000000000000000000000000000000001000000000000000000000000000000010000000000000170810001023000000100000000001011000011010000210023010000000000000000000000000000001000010000000002101242040021130242300101001000000002316329143621000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAA...................................................................................................................................................221235.00235000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000612200006020000000000000000000101000000000000000010010000000010000000000000000000000000000000000000100110100007014100000000000000000300298163418010000
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................191228.002280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000004050000003000000000000000000068000000000000000044010000000020000000000000000000000001010000000101011110101007071200000011000000001514910173524000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................231217.002170000000000000000000000000000000000000000000000000000000000000000000000000000000000003000001000003000100000000001002000000000000000000000000000000000000000000000000000002000100000100000001118000030500000000000000000001000000300000034260031000000030010000000000000000000000000000000000001001281051101120107000010000000000030164469000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................221207.002070000110000011000000000020000000000000000000000000000000000000000000000000000000000000000200000008001100000000020000000000000000010000000000000000000000000000000000001000000100000200000001708000012040000000000000000000110000000000000000110100000100600000000000000000000001000000000000010012970301101401110000000000000000013113610105000100
............................................................................................................................TACTTGGGCCAAGGGAATGCA....................................................................................................................................................211192.00192000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000001000002100000000000200000000000000000000000000000000000000000000000000000000000000000000000801200007011000000000020000000011000000000000000000000000010010000000000000000000000000000000000000000100100001101270000000000000000200394121913000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................201189.001890000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000003010000200000000000000000000010000000000000310001010000010010000000000000000000000010000000000100000410600021301515000000000000000023050104917000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................211168.00168000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000110000100000100000000000000000000000000000100000000000000001000000000000000000100010100000000000814000060400000000000000000003300000100000045000000000000002000000000000000000000021401000000011100011080000110411000000000000000011127351210000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................211167.001670000020000102000000000020000000000000000000000000000000000000000000000000000000000000000100000002000100000001000000002000000000000000000000000000000000000000000000000000000100000000000011305000017030000000000000100000300000000000001000010200000100100000000000000000000000000000000000002002106000019011120000000000000000501649610000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................181143.00143000000000000000000000000000001010100000000000000000000000200000000000000000000000000000010000103300010000000010000200000000001300002120000020000000000000000000000000001000001100000200000222410008010000000000000000003780000000000000000100000000000000000000000001000000000000001000001001014301300001105300000000000000001063125000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................231130.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000008080000502000000110000000000031000001000000000001000000011010000000000000000000000000000000000000101310120006012170000100000000000601528107000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................21198.00980000000000002000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001100000000000200000005010000003000000000000000000060000000000000000000000000020020000000000000000000000000100000000411000000240000120141100000000000000000000210000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................25187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000000300000010000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000010000000000000000000220000010000000000000000000000100000000000000000000000010000000000000010000000050120000000000000000612583156000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................23184.008400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000004632000001000000000000000000000000000000000000000000000000100000000100000000000000000000000100000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................23178.00780000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001200000000000000000000000000000000000000000000000000000000000000000000000100000000000005040000406000000000000000000000100000000000000000000000001000000000000000000000000000000000000000010100000003004000000000000001050765109000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................19177.00770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000010001000000000000000000000000000000001100000210000000000003030000403000000000000000000020001101000000000000000000000000000000000000000000000000000000000000000000200005023000000000000000010094375000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20168.00680000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000001000000000000000000000000000000000000000100000100000000000003010000401000000000000000000040000000000000000000000000000000000000000000000000000001000000000000000110110111605400000000000000004061124000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................20164.006400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000140100002000000000000000100000100000000000000000000000000100100000000000000000000000000000000000110001111200007061100000000000000004012011000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................19163.00630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004010000102000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000030201006006000000000000000020184235000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................21154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000020000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020050000000000000000411023913000000
.............................................................................................................................ACTTGGGCCAAGGGAATG......................................................................................................................................................18154.00540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000034000000000000000010000000000010000000000000000000000001000000000000002100100002035000000000000000010112433000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTATC......................................................................................23151.005100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19150.0050000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000304000040300000000000000000000000000000000000000000000001001000000000000000000000000000000000000001110000000400100000000000000004051724000000
............................................................................................................................TACTTGGGCCAAGGGAATGC.....................................................................................................................................................20142.00420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001061000000000000000070111363000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................25140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000010400000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000004043663010000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTTC..............................................................................................................................................26140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................21138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000010100000000000000000101000000000000000000000000000000000000000000001000000002000000000000000000000000000000000000000100000060000200200000000000000004090014000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18138.00380000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000001001000000000000001000000000000000000000000000000000000000000000000000000000000000000000003100000100000000000000000000003100000000000000000000000000000000000000000000000000000000000000000010110010100001300000000000000000020211000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000010000000000000304000010300000000000000000010000000000000000001001000000000000000000000000000000000000000000000100110000000101000000000000000002042220000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................19134.0034000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000101000000000000000000001000000000000000000000000000000000000103000010000000000000000000200000000000000002000000000001000000000000000000000000000000000000000000000030000201000000000000000003080110000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAA.................................................................................................................................................23132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000003000000300000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000100000000000000000056235000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000011000000300000000000000000001000000000000031000000000000000000000000000000000000000010000000000010110000000201200000000000000000041141000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................24130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413000000000000000000000000000000000000000000000000000000000000000100000000000000000000000002000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTATT......................................................................................23129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000011000000000000100000020300000000000000000000000000000000000000100000000000000000000000000000000000000010000000000202000000101100000000000000003002022000000
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................22129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100100000000000000000000000000001000000000000000000000000000000000000000200000000002100101000000000002053224000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000100000000000001000000000010000000000000000000000000000000000000000000010000000000000101000000200000000000000000000000000000000001000001000000000000000000000000000000000000000000001000000001100101200000000000000000020133000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................25128.0028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000200000000000000000000001000000000000002000000000000000000000000000000000000000010000000000200000000102000100000000000003042201000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACATC..............................................................................................................................................26128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................23127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000100000000000000000200000000000000000000000000000000000000000000000000010000000000200000000000000004023035000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................24126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000100000000000000000000200000000000000000000000000001000000000000000000000000000000000000000000000000001300000000000000001051233000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19124.0024000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000200000010000000000000000000000000000000000000000000000000000000000000000000000000011000000000000210000070000000000000000000003100000000000000000000000000000000000000000000000000000000010000000010100000000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000100000000000000000000000000000000012000000000000000000000000000000000000000000000000000000011020100100000000000000000002050001000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAT..................................................................................................................................................22121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000001000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001031433000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101112000000000000000000000000000000000010000000000000000000001000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000101100000000000000001030101000000
.............................................................................................................................ACTTGGGCCAAGGGAATGT.....................................................................................................................................................19117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100200000000000000000033105000000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................18117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100010000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTTC...................................................................................27117.00170000000000000000000000000000000000000000000000000000000041210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTTCA..................................................................................28116.00160000000000000000000000000000000000000000000000000000000061000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTGTAGCT-GCTT---CGC--CTTGGAGCCACC-------------------------------------------------------------AC-------CATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATGC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTCG--------AGGAGATCC----------GA-TCG------GATT-GGA--SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21156500.00565002563514533901252684520520
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22148975.00489752162920143052722322815270
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2018115.00811524188150453172450
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2214850.0048502180253112535780
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2312361.0023617602716514261270
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2012009.002009195531040100
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111746.00174616914014280
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2411093.00109390154101403603390
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1921071.50214349631631527980
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231724.00724186571508170
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................211178.0017813015143160
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211175.00175166000720
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191165.00165157010700
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241130.0013015011102110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................211116.00116111110300
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................201115.001151701184120
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22195.0095410115020
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20192.009290200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22187.00873011004330
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19182.008277100220
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................23179.00799240629110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................21175.0075459101100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23171.0071203014340
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................22165.006531064870
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23161.0061220003450
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22155.005554000100
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................19138.003822042280
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24133.003331002900
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21231.5063333002610
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20226.0052140003530
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23121.002112000900
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18221.004240000110
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22116.001615000100
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................22116.001616000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACC................................................................................................................................................24115.001501500000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT........................................................................................22113.001312000100
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................25112.00121000740
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18111.00116000230
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23110.001010000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19110.00107000300
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTG........................................................................................2119.0099000000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2319.0095002020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................1828.00168000710
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2317.0077000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................2036.331912001510
.............................................................................................................................ACTTGGGCCAAGGGAATG......................................................................................................................................................1816.0060000420
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................1816.0066000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................2116.0060000600
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1925.50111000910
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2025.00109000100
............................................................................................................................TACTTGGGCCAAGGGAATGCA....................................................................................................................................................2115.0051000310
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA......................................................................................2414.0040000220
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT.....................................................................................2514.0040000400
............................................................................................................................TACTTGGGCCAAGGGAATGCAA...................................................................................................................................................2214.0040001210
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................2214.0040101200
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTGT..............................................................................................................................................2414.0041010110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG.......................................................................................2323.5075000200
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG......................................................................................2413.0031000200
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1813.0032000100
..............................................................................................................................CTTGGGCCAAGGGAATGCAA...................................................................................................................................................2013.0031000200
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAG.......................................................................................2113.0033000000
droYak3
GTGTAGCT-ACTC---CGCTCCATGGAGCCATC-------------------------------------------------------------CG-------AGTC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATGC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAC----------TAAAGCGCCACGTGG--------TGGAGATCGTTTCTAATCGGA-TCG------GATT-GGA--SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21135151.0035151140521767728710365167432380260
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22131462.003146256519472726540050100358171210
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2013568.0035683212033328093582730102
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2413027.003027374263822401870000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2211853.00185336135114951122990000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2011800.0018004177111000140000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111704.0017041167018000150000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2311500.0015001281061739572141020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................191720.007201574021427101240130
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................211442.004428143000120000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACC................................................................................................................................................241406.004060040600000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231306.003062520525003480000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................231273.0027301624860030000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191151.001510148100020000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211120.001200118100010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241109.0010957265100200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................201102.001022227600020000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................221100.00100099100000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20196.0096093000030000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22181.0081069420060000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19180.0080073100150000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22175.00758174000181000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................21159.00590179011310000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23155.00559251700130000
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................20137.00370151101190000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................22136.00360810300150000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18133.0033033000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21128.0028223200010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23126.0026115000190000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................20123.0023174100010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20120.0020413100020000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19119.0019115000030000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18116.001629101120000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................22116.0016115000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................18114.0014013000010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24113.001343210030000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................23112.001205700000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................25112.001204700010000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18111.0011010000010000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23110.0010010000000000
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................22110.001002700010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................2119.00910800000000
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................1919.00903200040000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................2218.00807100000000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1817.00725000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................2516.00602400000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................2316.00606000000000
................................................................................................................................TGGGCCAAGGGAATGCAAACT................................................................................................................................................2116.00600500010000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................2115.00505000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................2115.00503000020000
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTGT..............................................................................................................................................2414.00401300000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2314.00404000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1923.50734000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2313.00303000000000
..............................................................................................................................CTTGGGCCAAGGGAATGCA....................................................................................................................................................1913.00303000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC.......................................................................................2213.00303000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGA.......................................................................................2313.00303000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAC.........................................................................................2113.00300300000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2023.00606000000000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................2213.00302100000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................2313.00303000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAGA......................................................................................2412.00202000000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTAA.......................................................................................2012.00202000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................2412.00220000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGCC.........................................................................................2112.00200200000000
droEug1
GTGTAACT-ACTC---CTG--CGTGGA-CTATC-------------------------------------------------------------AC-------TATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------------TTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT----------TAAATCGCCACGTGG--------TGGAGATCA----------AA-TCG------GATCTATA--SizeHit CountTotal NormTotal
No Reads
droBia1
GTGTAACT-GCTC---CT-----CGCAGACGGC-------------------------------------------------------------GG-------AGTC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCC-----------------CTAGTAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TAAAGCGCCACGTGG--------TGGAGATCG--------------CG------GCTCTGCACTSizeHit CountTotal NormTotal
No Reads
droTak1
GTGGAGTG-GTTT------------------------------------------------------AA-------------------------AG-------TATCCCTTTGGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTG---ATCG-----------------CTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TTAAAGGCCACGTG---------TGAAGTTAG----------GA-TCG------GTTT------SizeHit CountTotal NormTotal
No Reads
droEle1
GTGTAACTAACTCCTTCA--------------------------------------------------AAA---------------------------------------AAGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTA---ATTG-----------CAA-TGCTACAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGAT----------TTAAACGCCACGTGG--------TGGAGATCG----------GGAGTAGTTCTGGTTC------SizeHit CountTotal NormTotal
No Reads
droRho1
GTGTAACT-CCTT---CAA--C---GAACTATC-------------------------------------------------------------AG-------TATC----CCGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTT---TTCG-----------CAC-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCTGAT----------TTAAACGCCACGTGG--------TGGAGATCG----------GT-TCG------GTTC------SizeHit CountTotal NormTotal
No Reads
droFic1
GTGTAACT-CCTT---CG-----TGGAACCACC-------------------------------------------------------------AG-------ATCC----CCGGGCAGCGAATTACTTGGGCCAAGGGGATGCAAACTGTG---ATCG-----------CA---GCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGAT----------TTAAGCGCCACGTGG--------TGG-GAT----------------CG------GATT-GTC--SizeHit CountTotal NormTotal
No Reads
droKik1
GTGTAACCC------------------------------------A-----GAGAT--ACTTTA------------------------------------------CTCTTCGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------CAATTACCAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAAAAACACACAGACAAACGCCACGTGGTTGATCCGTGGAGATCG----------GT-TTC------GGTT-TCA--SizeHit CountTotal NormTotal
No Reads
droAna3
GTGTAACC-AATG---TG----ATGGAGCTCCC------------ACGGAAAAGA--CACCCCACGGAAAC---------------------------------------GAGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTG---ATCG-----------CAA-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTT----------GCAAACGCCACGTGG--------TGGAGATCG----------CT-CCA------GCTC-CAA--SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21115124.00151248181508282475986174
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22111581.0011581702464856166361275
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2014855.004855157948575309751
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2213948.003948152519163230931
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1911139.001139567512351528
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................201654.00654633001191
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................211642.00642608210310
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................231459.00459297851112711
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231303.003031093091793
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACT................................................................................................................................................241233.002337544611790
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211130.0013012500050
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191121.0012111410060
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21179.00799000691
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................21160.006032900271
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23148.004829203140
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................21147.00473001430
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20145.004521001221
.............................................................................................................................ACTTGGGCCAAGGGAATTCA....................................................................................................................................................20143.004311011237
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22142.00423800130
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22141.004123200142
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18140.00403900010
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19140.00403900010
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20137.00373700000
...............................................................................................................................TTGGGCCAAGGGAATTCAAACT................................................................................................................................................22130.00302101053
.............................................................................................................................ACTTGGGCCAAGGGAATTCAA...................................................................................................................................................21129.002970001210
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT........................................................................................22127.00271000260
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................24127.00271100196
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22124.00242200020
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAAC.................................................................................................................................................23123.00231070006
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20119.00192110240
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTGT........................................................................................22118.00180000180
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAA..................................................................................................................................................22117.00174000112
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18117.00171101230
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................22117.00170000170
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18112.00121101000
..............................................................................................................................CTTGGGCCAAGGGAATTCAAACT................................................................................................................................................23111.0011900002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24111.0011300080
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23110.0010800110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23110.0010900010
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19110.0010900010
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................20110.00101000000
...............................................................................................................................TTGGGCCAAGGGAATTCAAACTGT..............................................................................................................................................2419.009200070
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................1819.009900000
...............................................................................................................................TTGGGCCAAGGGAATTCAAACTG...............................................................................................................................................2318.008300050
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................2218.008800000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1917.007300031
...............................................................................................................................TTGGGCCAAGGGAATTCAAA..................................................................................................................................................2016.006100032
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACC................................................................................................................................................2416.006050010
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACTT...............................................................................................................................................2515.005100013
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2214.004400000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTT........................................................................................1924.008700010
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................2314.004400000
..............................................................................................................................CTTGGGCCAAGGGAATTCAAAC.................................................................................................................................................2213.003300000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................1913.003000030
.............................................................................................................................ACTTGGGCCAAGGGAATTC.....................................................................................................................................................1913.003200010
.............................................................................................................................ACTTGGGCCAAGGGAATTT.....................................................................................................................................................1913.003000012
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTA.........................................................................................2013.003300000
.............................................................................................................................ACTTGGGCCAAGGGAATTCT....................................................................................................................................................2013.003200010
...............................................................................................................................TTGGGCCAAGGGAATTCA....................................................................................................................................................1813.003200100
...............................................................................................................................TTGGGCCAAGGGAATTCAAAC.................................................................................................................................................2113.003300000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT.....................................................................................2513.003200010
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................2313.003200010
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTAT.......................................................................................2012.002200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................2412.002200000
.................................................................................................................................GGGCCAAGGGAATTCAAACT................................................................................................................................................2012.002200000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAT...................................................................................................................................................2112.002000020
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAC.......................................................................................2212.002200000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTC.........................................................................................2012.002200000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2112.002200000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................2112.002200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................2012.002100010
...............................................................................................................................TTGGGCCAAGGGAATTCAAACTT...............................................................................................................................................2312.002100010
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGT..........................................................................................2112.002200000
droBip1
GTGTAACC-AAAG---TTG---GTGGAGCTCCC------------A-----GAGA--CACCCCACGGAAAC---------------------------------------GAGGGGCAGCGAATTACTTGGGCCAAGGGAATGCAAACTGTG---ATCG-----------CAA-TGCTAGAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTT----------GCAAACGCCACGTGG--------TGGAGATCG----------CC-CCA------GACC-CAA--SizeHit CountTotal NormTotal
No Reads
dp5
GTGTAACCC------------------------------------A-----GAGATGCACTGCATCCAAGGCCTGTGCCTGTGTCTGAGAGCCCACCCACCCGAA------TAGGGCAGCGAATTACTTGGGCCAGGGGAATTCAAACTGTG---ATCG-----------CAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAA----------GTAAACGCCACGTGG-------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21157169.00571691115297741509410243544648340160331018
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22153373.00533732791601528401887804623652132271481877
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2217422.00742267380516544374389912254107
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2015909.0059092473395963820689531102764
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2012701.002701425811203360677
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2312674.00267448803262222328414139062
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1912096.002096137943881230147078229
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111669.0016690145271362201699
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................2311091.0010911521620128116368624
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211339.00339032701005051
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191308.00308029610008021
.............................................................................................................................ACTTGGGCCAGGGGAATTCAAACT................................................................................................................................................241227.002270411072300003512
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................221162.0016256834305230240
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................211158.001583712024002011
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................191142.00142113200001071
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241136.0013623334012210475
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................211100.001002610010190161
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22192.0092076000030112
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20189.008907700102090
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20186.008610354010100260
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18174.007407300000010
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23168.0068418301140343
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24165.006525100250500
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22151.0051027400250130
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23135.0035018000030140
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22130.003011900000091
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18130.003017000010201
.............................................................................................................................ACTTGGGCCAGGGGAATTCAAAC.................................................................................................................................................23128.002804122200017
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTA.............................................................................................17126.002600000000215
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18126.002602200002011
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................20123.002302200001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20122.002211143001020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23122.00220900006070
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................18121.002102100000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19120.002001411101011
.............................................................................................................................ACTTGGGCCAGGGGAATTCAAACC................................................................................................................................................24120.002000200000000
.....................................................................................................................................................GTG---ATCG-----------CAA-TGCAAAAAG..............................................................................................................19117.001701300200020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC......................................................................................24112.001201100000100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................19112.00123300010050
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23112.00120900100020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTT..............................................................................................16111.00110000000092
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................25111.00110300102050
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTC........................................................................................21110.001001000000000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................22110.001001000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................2019.0096100000020
.............................................................................................................................ACTTGGGCCAGGGGAATTCA....................................................................................................................................................2019.0090300004020
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1819.0094400000010
.............................................................................................................................ACTTGGGCCAGGGGAATTCAA...................................................................................................................................................2119.0090300004011
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA......................................................................................2418.0080000002060
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTT.....................................................................................2518.0080000001070
.............................................................................................................................ACTTGGGCCAGGGGAATTC.....................................................................................................................................................1917.0070700000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................2117.0070500000020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................2117.0071131001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA......................................................................................2417.0070000001060
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................2317.0070200001040
.......................................................................................................................................................................................TTTGTTCGTTTGGCT...............................................................................................1527.001400000000113
.............................................................................................................................ACTTGGGCCAGGGGAATTCAAA..................................................................................................................................................2217.0070200003011
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTGG...................................................................................2716.0060000000060
..............................................................................................................................CTTGGGCCAGGGGAATTCAAACT................................................................................................................................................2316.0060600000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTA.........................................................................................2016.0060400000020
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGA..........................................................................................1915.0050500000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAG.......................................................................................2215.0050400001000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2315.0050300000002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA.......................................................................................2315.0050200000030
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAA.........................................................................................2114.0041200001000
.....................................................................................................................................................GTG---ATCG-----------CAA-TGCAAAAAGT.............................................................................................................2014.0040310000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA......................................................................................2424.0080200013020
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTC.........................................................................................2014.0040301000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATTTCAG..................................................................................2813.0030000000030
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTATTT.....................................................................................2413.0030000000030
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTT........................................................................................1913.0030300000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATAC.....................................................................................2513.0030000000030
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC.......................................................................................2313.0030100002000
............................................................................................................................TACTTGGGCCAGGGGAATTCA....................................................................................................................................................2113.0030000003000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATCAG....................................................................................2613.0030000000030
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2113.0030100000020
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTT........................................................................................2313.0030300000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG.......................................................................................2312.0020100000010
droPer2
GTGTAACCC------------------------------------A-----GAGATGCACTGCATCCAAGGCCTGTGCCTGTGCTTGAGAGCCCACCCACCCGAA------TAAGGCAGCGAATTACTTGGGCCAGGGGAATGCAAACTGTG---ATCG-----------CAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCTCAA----------GTAAACGCCACGTGG-------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21117598.0017598185543431009710811095
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22111938.00119381803335422864666423
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2012033.002033303430218221249
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2211776.001776444847351233
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................191801.00801244118578419
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................231788.00788197110246469
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................201401.00401236000039
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................211336.00336929001036
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241228.00228147410076
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231198.001981559100123
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18178.00787422000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................21151.00510480003
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22138.0038141110111
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................19135.00350330002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21128.00280900019
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23127.002712400011
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20126.00260240002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20125.00251330009
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22124.002401400010
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................20122.00222110000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19120.00200150005
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................21120.00201500005
.............................................................................................................................ACTTGGGCCAGGGGAATGCAAACT................................................................................................................................................24117.0017356012
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19116.0016061009
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22116.00161120003
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18115.0015370005
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23111.0011321005
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18110.00100100000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................2018.008700001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................2518.008700001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................2316.006030003
.............................................................................................................................ACTTGGGCCAGGGGAATGC.....................................................................................................................................................1915.005013001
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1814.004211000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTAA......................................................................................2414.004210001
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................2314.004040000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAA.........................................................................................2123.507301003
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA.......................................................................................2313.003020001
...............................................................................................................................TTGGGCCAGGGGAATGCAAACT................................................................................................................................................2213.003110001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................2213.003020001
.............................................................................................................................ACTTGGGCCAGGGGAATGCAAA..................................................................................................................................................2213.003011001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTC........................................................................................2113.003030000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTT........................................................................................1913.003010002
............................................................................................................................TACTTGGGCCAGGGGAATGCA....................................................................................................................................................2113.003000003
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG......................................................................................2413.003010002
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAC...........................................................................................1913.003210000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................1812.002110000
.............................................................................................................................ACTTGGGCCAGGGGAATGCAA...................................................................................................................................................2112.002010001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2312.002200000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2012.002010001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGA.......................................................................................2312.002010001
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGT..........................................................................................2112.002200000
.................................................................................................................................................................................AAAAAGTTTGTTCGTTTGGCTTAAGT..........................................................................................2612.002200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................2112.002100001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................2412.002100001
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2212.002020000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTT........................................................................................2311.001010000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAG...........................................................................................2011.001000001
............................................................................................................................TACTTGGGCCAGGGGAATGCAA...................................................................................................................................................2211.001001000
............................................................................................................................TACTTGGGCCAGGGGAATGTT....................................................................................................................................................2111.001000001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA......................................................................................2411.001100000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTAAA......................................................................................2011.001100000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................2311.001000001
................................................................................................................................TGGGCCAGGGGAATGCAAACT................................................................................................................................................2111.001100000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGA..........................................................................................1911.001010000
..............................................................................................................................................................G-----------CAA-TGCAAAAAGTTTGTTCGTTTGT.................................................................................................2611.001001000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................2211.001000001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAG............................................................................................1811.001100000
...............................................................................................................................TTGGGCCAGGGGAATGCAAACTT...............................................................................................................................................2311.001010000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAGA......................................................................................2411.001100000
...................................................................................................................................................................................AAAGTTTGTTCGTTTGGC................................................................................................1811.001100000
.....................................................................................................................................................GTG---ATCG-----------CAA-TGCAAAAAG..............................................................................................................1911.001000001
..................................................................................................................................................ACTGTG---ATCG-----------CAA-TGCAAAAAG..............................................................................................................2211.001100000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2311.001010000
droWil2
GTGTAAAAC-ACT---TGC--TAAAAAAAAATTTAAAACCGTTT-----------TCCATT---------------------------------TC--------ATTTTTTGGGGGCAGCGAATTACTTGGGCCAAGGGAATTCAAACTGTG---AATT-----ATTTCAAAA-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGTCCGTAC---------AATTGCGACACGTGG--------TGAAG------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21134426.003442646061751789893054260
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22132444.003244416501507059849576164
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2018026.00802615012949303948849
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1912625.002625681113443035525
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2212079.0020798712905941008
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACT................................................................................................................................................2411860.001860277621597122
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2011493.0014931114384031
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111363.0013635129044222
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................232856.50171322985627533320
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231314.003142917287242
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................221254.002541247838104
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191250.002500241711
............................................................................................................................TACTTGGGCCAAGGGAATTCAAACT................................................................................................................................................251120.0012001358913
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211116.001160113300
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................181109.001094105000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAA...................................................................................................................................................211100.0010007413913
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20195.0095186710
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................24293.001861012228287
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................20193.0093872400
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19190.0090083520
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAA..................................................................................................................................................22187.00870324564
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20187.0087322717110
.............................................................................................................................ACTTGGGCCAAGGGAATTCA....................................................................................................................................................20182.008204442113
............................................................................................................................TACTTGGGCCAAGGGAATTCA....................................................................................................................................................21181.00810105939
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAAC.................................................................................................................................................23161.0061092491
...............................................................................................................................TTGGGCCAAGGGAATTCAAACTGT..............................................................................................................................................24156.00560511391
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20152.0052413710
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18146.00461264240
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23141.00413171470
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................22238.0076074110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22138.00381215101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23138.0038228440
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21135.0035425420
............................................................................................................................TACTTGGGCCAAGGGAATTCAA...................................................................................................................................................22131.0031051853
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................21130.0030205500
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC.......................................................................................23129.0029234200
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19125.0025022120
...............................................................................................................................TTGGGCCAAGGGAATTCAAACTG...............................................................................................................................................23123.0023137102
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22122.0022021100
...............................................................................................................................TTGGGCCAAGGGAATTCAAACT................................................................................................................................................22118.001816173
............................................................................................................................TACTTGGGCCAAGGGAATTCAAA..................................................................................................................................................23117.001701574
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................18117.0017016100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................19216.0032812273
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18115.0015013020
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24113.001357010
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACTT...............................................................................................................................................25113.0013011101
.............................................................................................................................ACTTGGGCCAAGGGAATTC.....................................................................................................................................................19113.0013110101
............................................................................................................................TACTTGGGCCAAGGGAATTCAAAC.................................................................................................................................................24112.001206051
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................21111.001143301
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2219.00909000
..............................................................................................................................CTTGGGCCAAGGGAATTCAAACT................................................................................................................................................2318.00807100
............................................................................................................................TACTTGGGCCAAGGGAATTC.....................................................................................................................................................2018.00802600
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................2317.00707000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1827.001445410
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTA.........................................................................................2017.00707000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACTGTG---A.........................................................................................................................................2816.00612300
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACC................................................................................................................................................2415.00500131
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAC...........................................................................................1915.00541000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTC........................................................................................2115.00505000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACTGTG---..........................................................................................................................................2715.00501400
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACTGT..............................................................................................................................................2614.00400310
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................2314.00412100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACA......................................................................................2414.00440000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCCC......................................................................................2423.00660000
................................................................................................................................TGGGCCAAGGGAATTCAAACTGTG---A.........................................................................................................................................2513.00300300
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................2123.00606000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAG.......................................................................................2213.00303000
.....................................................................................................................................................GTG---AATT-----ATTTCAAAA-TGCAAAAAG..............................................................................................................2513.00300030
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATA......................................................................................2412.00202000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAACA................................................................................................................................................2412.00200110
.....................................................................................................................................................................................AGTTTGTTCGTTTGGCTTAAGTTA........................................................................................2412.00201010
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2112.00202000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................1922.00404000
............................................................................................................................TACTTGGGCCAAGGGAATTCAAACTT...............................................................................................................................................2612.00201010
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2012.00202000
...............................................................................................................................TTGGGCCAAGGGAATTCAA...................................................................................................................................................1912.00201100
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGT..........................................................................................2112.00202000
.............................................................................................................................ACTTGGGCCAAGGGAATTCAAAA.................................................................................................................................................2312.00200200
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................2321.50303000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2321.50302001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTCC......................................................................................2421.50330000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................2431.33421010
...............................................................................................................................................................................GCAAAAAGTTTGTTCGTTTGGCTTA.............................................................................................2511.00100100
droVir3
TTATATTT-ATTG---AC----CAGGTGTCTCT-----------CAGTGCG-CGGTACGCTCCATTCAAAG---------------------------------------TTCGGGCAGCAAATTACTTGGGCCAAGGGAATGCAAACTGTC---AACG-----------CAT-TGCAATAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCAAC-----------ATAACGCCACGTGG--------TGGAG------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................211172012.00172012511679020846274667192005311874535291200019602161625152214028132334986201611143208678623223608941927269391751400249148310100000003795121328420328115012532611648011604434112645332944381154505550
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................221137312.0013731219593271406217013571312620686503000153416404951062799484143543014065629237592108402443612317341952319415008198150003000021914202616202481561042002321756635058754723504239242623192238354244
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................20128030.002803021272423162382930502113843504000260328872042231213461503243392291862734781439349011816300062358000000000113322604867284555265100151224292616221819218151114
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................22115278.0015278926206464443114111113000061136337786813002230433216962128061520008184500000000000000032521169202200011498300101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................19112205.00122051736230153137111007583168100011514730787051136711724234161326917146271576065620006667000000000010110149162163660500135028252127202115235
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2319670.0096703126410244245142220531002110114306536437024126242646472048627204501752000448500000000000000055731328839046152312323507143
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2219175.00917519646308110045661340621000831145777524769431325401011204115022375603540000140000000000001010213171535301166018300001620002421
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2413903.003903160161288134303631023320007724133020298427730012115521080237074002006402000218131730421421148914748424380004219000000142011713346
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2012212.00221211017805041040120000742431749000001382268801900000420000000000000001011004300000000010000001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................2311863.0018636713446210540221100001825710138157280000159317762680581000051000000000000102883251123604100000100001110
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2111770.001770521228402502060000610387123310001351166414901300000390000000000001000000103000000010002200000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................2111498.001498209864160234413050000010002891110000141502592058000002030000000000000001110015100000031410000010
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................1811380.0013803431000270150300001615259186184020122533292105150260000011000000000000000000040000000012000100000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241873.00873170274021330903300006705241311301000471143590019000004301000000001000000121011800010187413301122
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................201416.0041613724771019020700001112003220001029580500000130000000000000000010006900010082413301010
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................211380.0038020830180212551000691513154200020154821480190000080000000000000000000315800000000000000010
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................231329.00329102116017025218000054162015110000015371345050000050000000000300001005104200000100000017733
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211282.00282102650000001000030000000000000051201000000000000000000000000000300000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191267.00267402271010000000010101020000000137803000001000000000000000000100500000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................211256.0025691461123010700003512148130000192992601500000110000000000000000000003700010000000001000
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................201246.0024610210070271490000200002513000016221126070000040000000000000000000404600000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................231244.00244702120170309000011022260800000829184001200000190000000000001000000103202000000000100000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................221227.0022700101012014133000015021322310000142313190110000070000000000000001010104500000000000000001
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGG..........................................................................................201219.002191852230030000000000000000100000010001000000000000000000000000000300000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................221215.00215303610280201000000201009020000082083201000000200000000000000000010112000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................231180.001801611830130200000002011241100000103172501000000110000000000000000000201800000000001000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC......................................................................................241177.0017714111011100000000010000300000008639230200000180000000000000000000001100000000100000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................181153.00153201350000001000001000010000010131301000001000000000000000000000100000000000000001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................221136.00136418800801000000011000001000000841400000001000000000000000000000400000000000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................191133.00133008210702000000000001200000002721203000006000000000000000210000300000000000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................201125.00125006300300000000310000111000004982300000002000000000000000200000200110000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................191108.001080053070250250000100020220000001303060000020000000000000000000501600000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTC........................................................................................211104.0010420611050000000000000010000000182903000009000000000000000000000200000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................22197.009728315001300000000010000400100001603020000010000000000000000100000900000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................19286.50173304281120010400000701300240000001359016000009000000000000000000002900000000010100020
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18175.00750015101000010000113010202000100113409000009000000000000000000000100000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATCC.....................................................................................25169.0069170100600000000000000200000003837010000070000000000000000000001300000010000000000
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19165.0065001510100000000110201601000005105502000006000000000000000000000102000000000000000
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................22158.00584041020605000003020000000000101602000000000000000100213200210400000000000001301
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCC.......................................................................................23256.00112690400400000000000000500000000602030000060000000000000000000001200000000000000001
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACC................................................................................................................................................24156.005610054000100000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20354.671647574420800000000000000102000000225010000050000000000000000000001000000000000000000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................23149.004900147000101000000000020000000211002000000000000010100101010320100000000000003400
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................25148.004800910203070000200000001000000102030000000000000000000001001001500000000000000000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22141.004100320000000000000000000000000061000000001000000000000000000000100000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA.......................................................................................23238.0076501010900000000200001200000002154704000009000000000000000000000500000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGAA.........................................................................................21137.003715110000102000011100020000000110002000001000000000000000000000600000000010000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCC........................................................................................22236.507339051090000000001000050000000010301000004000000000000000000000400000000000000000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................18133.00335150030000000002000010000000022604000000000000000000000100000100000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATG......................................................................................................................................................18123.002300100006010000000000000000000020001000000000000000000000000000300000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTG.........................................................................................21223.00469033010500000004000050000000161201000002000000000000000000001200000000000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................18121.002100140010001000000000000000000011001000001000000000000000000000100000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................23220.504120610700000000000000000000001104201000004000000000000000000000300000000000000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................25120.00200020000401000010010010100000130300000000000000000000000000000000000000000001001
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................21117.00170080000000000000000000000000011500000001000000000000000000000100000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24117.00172142000000000000000000000000022200000001000000000000000000000100000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCCC......................................................................................24217.003426010020000000000000010000000020000000000000000000000000000000200000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAT...........................................................................................19216.00329010020000000000010121220000000007000001000000000000000000010200000000000000000
...................................................................................................................................GCCAAGGGAATGCAAACT................................................................................................................................................18116.00160000000808000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GTC---AACG-----------CAT-TGCAATAAG..............................................................................................................19115.00151021000000000010000000000000122300000002000000000000000000000000000000000000000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................20113.001300110000000000000000000000000011000000000000000000000000000000000000000000000000
............................................................................................................................TACTTGGGCCAAGGGAATGCA....................................................................................................................................................21113.00130000000401000000000000000000020200000001000000000000000000000300000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTACC......................................................................................24112.00125000010000000000000000000000011002000000000000000000000000000200000000000000000
............................................................................................................................TACTTGGGCCAAGGGAATGCAA...................................................................................................................................................22112.00120000000004000010000010000000000200000000000000000000000000000400000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTGTC---AACG-----------CAT-TGCAATAAG..............................................................................................................43112.00120000000000000000000000000000000000000000000000000202001105100000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAG......................................................................................24111.00110130000000000000000000000000110100000001000000000000000000000100000000020000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTCC......................................................................................24211.002210010030000000000000000000000030000000002000000000000000000000300000000000000000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................22111.001100100000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................23211.00221090010000000010000020000000220200000000000000000000000000000200000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................21111.00110020000300000001000000000000010000000000000000000000000000000400000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTAT........................................................................................22111.00112040000001000000000000000000010000000000000000000000000000000300000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAA.................................................................................................................................................23111.00110010000401000000000020000000000100000000000000000000000000000100000000000000100
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAC...........................................................................................19210.502116201010000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................24210.00203120010000000000000000000000120301000003000000000000000000000200000000000001000
..............................................................................................................................CTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................2218.0080030010000000000000000000000100100000000000000000000000000000200000000000000000
...............................................................................................................................TTGGGCCAAGGGAATGCAAAC.................................................................................................................................................2118.0080010000100000001000000000000002000000000000000000000000111000000000000000000000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACA................................................................................................................................................2418.0080010010001000000000000000000000100000000000000000000000000000400000000000000000
droMoj3
ATTTTCCT-GTTC---AG-----TGTATGC----------------------------------------------------------------------------TCCTGCAGGGCTGCGAATTACTTGGGCCAAGGGAATGCAAACTGTTCGAAAAG-----------CAT-TGCAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------AAAACGCCACGTGG--------TGG--------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................22173006.007300639999484681441751014801
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................21165268.00652684100284134232614617670
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................2017529.0075293392423513243735
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................2216009.006009377629162631943
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................2113443.00344333362125151
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................2013378.00337833130001748
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2312881.0028811488187201321216
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2412839.00283992328221937478
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................1911578.001578686181417852
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................231968.00968452331169340
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................221664.006645112475531
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................211623.0062325002275321
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................211337.0033733300004
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACC................................................................................................................................................241296.0029600002960
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................191253.0025324400027
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAAC.................................................................................................................................................231229.0022919110016534
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................201158.00158145000121
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................241149.00149303011798
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................191147.0014714100132
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTGT..............................................................................................................................................241146.001461230019112
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................221127.0012711900008
.............................................................................................................................ACTTGGGCCAAGGGAATGCAA...................................................................................................................................................21196.009616201374
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGC..........................................................................................20178.007820005026
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................22169.006942000819
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................21169.006944000520
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAA..................................................................................................................................................22166.006694101042
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTCT........................................................................................22160.00601000059
.............................................................................................................................ACTTGGGCCAAGGGAATGCA....................................................................................................................................................20158.005814100043
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................18156.00565500001
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................22153.00535300000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................23150.0050131011718
...............................................................................................................................TTGGGCCAAGGGAATGCAAACT................................................................................................................................................22141.00418000825
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTC.......................................................................................23140.00401000138
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................19140.00403700003
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................23135.00352600027
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTG...............................................................................................................................................23133.00336200025
.....................................................................................................................................................GTTCGAAAAG-----------CAT-TGCAAAAAG..............................................................................................................22132.003225011113
.............................................................................................................................ACTTGGGCCAAGGGAATGC.....................................................................................................................................................19129.00293001322
...............................................................................................................................TTGGGCCAAGGGAATGCAA...................................................................................................................................................19127.00273010023
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................18124.00242000013
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................23121.00211900002
..............................................................................................................................CTTGGGCCAAGGGAATGCAAACT................................................................................................................................................23120.00201410023
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTT...............................................................................................................................................25119.00190000316
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATT......................................................................................24119.00195000311
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................20218.503715000121
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................18118.0018800019
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................20116.00161600000
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................18114.00141400000
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................18112.0012700023
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTATC......................................................................................24111.00110000011
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................21110.0010900100
............................................................................................................................TACTTGGGCCAAGGGAATGCAAACT................................................................................................................................................2519.009120033
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTGC..............................................................................................................................................2418.008000080
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTT.........................................................................................2218.008800000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTC........................................................................................2118.008700001
...............................................................................................................................TTGGGCCAAGGGAATGCAAA..................................................................................................................................................2018.008100007
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTA.......................................................................................2327.5015600027
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2317.007700000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAT...................................................................................................................................................2117.007200104
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAC......................................................................................2417.007300022
.............................................................................................................................ACTTGGGCCAAGGGAATGT.....................................................................................................................................................1916.006200004
...............................................................................................................................TTGGGCCAAGGGAATGCAAACTGTT.............................................................................................................................................2516.006000006
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTG........................................................................................2116.006600000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACA................................................................................................................................................2415.005100013
...............................................................................................................................TTGGGCCAAGGGAATGCAAAC.................................................................................................................................................2115.005200021
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTAA.......................................................................................2014.004400000
.............................................................................................................................ACTTGGGCCAAGGGAATGCAAACTA...............................................................................................................................................2514.004010021
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTTG.......................................................................................2314.004400000
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGGC......................................................................................2414.004400000
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2314.004400000
............................................................................................................................TACTTGGGCCAAGGGAATGCAA...................................................................................................................................................2214.004000004
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1933.6711700004
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTC.........................................................................................2013.003000021
.............................................................................................................................ACTTGGGCCAAGGGAATGCT....................................................................................................................................................2013.003100002
.............................................................................................................................ACTTGGGCCAAGGGAATGTT....................................................................................................................................................2013.003000003
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2113.003200010
droGri2
GTGTATTT-GGT------------GGG------------------------------------------------------------------------------------GCGGGCAGCGAATTACTTGGGCCAAGTGGATGTAAACTGTG---AAAGCGCATTTTGCATAT-AACAAAAAGTTTGTTCGTTTGGCTTAAGTTATTTTCATGCCCGAT-----------ATAACGCCACGTGG-------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTT.........................................................................................2113447.00344724161031
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTA........................................................................................2212548.0025481862686
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGT..........................................................................................201376.00376194182
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTT........................................................................................221338.00338213125
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTT.........................................................................................201198.001981926
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTA........................................................................................211187.0018717512
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAA.......................................................................................231148.001487474
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAT.......................................................................................23168.00685018
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAG...........................................................................................19163.00634023
.............................................................................................................................ACTTGGGCCAAGTGGATGTAAACT................................................................................................................................................24154.00544212
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTT........................................................................................21117.0017170
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGT..........................................................................................19115.0015141
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTT.........................................................................................19114.0014131
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTA........................................................................................20111.0011110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAA......................................................................................2419.00954
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAG.......................................................................................2318.00853
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAG...........................................................................................1817.00770
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAT.......................................................................................2216.00660
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAA.......................................................................................2216.00660
.............................................................................................................................ACTTGGGCCAAGTGGATGTAAAC.................................................................................................................................................2316.00660
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTA.........................................................................................2114.00422
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTG........................................................................................2214.00440
.............................................................................................................................ACTTGGGCCAAGTGGATGTAA...................................................................................................................................................2114.00413
.............................................................................................................................ACTTGGGCCAAGTGGATGTA....................................................................................................................................................2014.00440
.............................................................................................................................ACTTGGGCCAAGTGGATGTAAA..................................................................................................................................................2214.00404
..............................................................................................................................CTTGGGCCAAGTGGATGTAAACT................................................................................................................................................2313.00321
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAA............................................................................................1813.00330
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTT.........................................................................................1812.00211
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAT.......................................................................................2112.00220
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTC........................................................................................2212.00220
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGT..........................................................................................1812.00220
.............................................................................................................................ACTTGGGCCAAGTGGATGTAAACTT...............................................................................................................................................2512.00211
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTAA.......................................................................................2411.00110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAA...........................................................................................1911.00101
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTAA.......................................................................................2111.00110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTC.........................................................................................2111.00110
.................................................................................................................................GGGCCAAGTGGATGTAAACT................................................................................................................................................2011.00110
...........................................................................................................................................................................................TTCGTTTGGCTTAAGTTA........................................................................................1811.00110
...............................................................................................................................TTGGGCCAAGTGGATGTAAACTG...............................................................................................................................................2311.00110
..............................................................................................................................CTTGGGCCAAGTGGATGTAAA..................................................................................................................................................2111.00110
.........................................................................................................................................................................................TGTTCGTTTGGCTTAAGTTT........................................................................................2011.00110
.............................................................................................................................ACTTGGGCCAAGTGGATGT.....................................................................................................................................................1911.00101
..........................................................................................................................................................................................GTTCGTTTGGCTTAAGTTA........................................................................................1911.00110
.................................................................................................................................GGGCCAAGTGGATGTAAACTT...............................................................................................................................................2111.00110
...................................................................................................................................GCCAAGTGGATGTAAACT................................................................................................................................................1811.00101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTGG.......................................................................................2311.00110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAC.....................................................................................2511.00110
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTATTTTC...................................................................................2611.00110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTCA.......................................................................................2311.00101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGA..........................................................................................2011.00101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAC.......................................................................................2311.00110
......................................................................................................................................................................................GTTTGTTCGTTTGGCTTAAGTTA........................................................................................2311.00110
........................................................................................................................................................................................TTGTTCGTTTGGCTTAAGTTAAA......................................................................................2320.50110
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAAGTTAAAA.....................................................................................2520.50101
.......................................................................................................................................................................................TTTGTTCGTTTGGCTTAT............................................................................................1830.33110

Generated: 10/20/2015 at 07:36 PM