ID:

dse_119

Coordinate:

scaffold_284:757-809 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -20.0 -19.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
HETALINEtelomeric+
mature
  1. dse_118  scaffold_2596:345-369 -
  2. dse_119  scaffold_284:758-782 -
star
  1. dse_118  scaffold_2596:374-396 -
  2. dse_119  scaffold_284:787-809 -

Sense Strand Reads

CAGAAGGACGGAAGGACCGAGTTGCTGGAGTCCTCGAGAGTCATTGGAGGTGAGTATTAGATGTGTTTGGCAGGGAATTTGCTACGGACGCTGGATGCGCGCCACTTGCAACATTTATGTCCGGATAGCGTTGCAGGTAATTTATAGGTGGAG
***********************************(((.((....((.((((.(((((....(((((((((((.....))))))..)))))..))))).)))).))....)).))).************************************
Read size # Mismatch Hit Count Total Norm Total M054
female body
V114
embryo
V115
head
V113
male body
.............................................................................TTTGCTACGGACGCTGGATGCGCGC................................................... 25 0 2 15.50 31 6 20 5 0
..................................................TGAGTATTAGATGTGTTTGGCAG................................................................................ 23 0 2 15.00 30 27 3 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGG............................................................................... 24 0 2 9.00 18 16 2 0 0
..................................................TGAGTATTAGATGTGTTTGGCA................................................................................. 22 0 2 6.50 13 7 4 1 1
.............................................................................TTTGCTACGGACGCTGGATGCGCGCC.................................................. 26 0 2 5.00 10 8 1 1 0
...............................................................................TGCTACGGACGCTGGATGCGCGCCACT............................................... 27 0 2 4.50 9 8 0 1 0
..................................................TGAGTATTAGATGTGTTTGGC.................................................................................. 21 0 2 4.00 8 2 5 1 0
..............................................................................TTGCTACGGACGCTGGATGCGCGC................................................... 24 0 2 3.00 6 4 1 0 1
...............................................................................TGCTACGGACGCTGGATGCGCGCCAC................................................ 26 0 2 2.50 5 5 0 0 0
.............................................................................................................AACATTTATGTCCGGATAGCGTTG.................... 24 0 2 2.00 4 4 0 0 0
..............................................................................TTGCTACGGACGCTGGATGCGC..................................................... 22 0 2 2.00 4 0 4 0 0
...................................................GAGTATTAGATGTGTTTGGCAG................................................................................ 22 0 2 1.50 3 3 0 0 0
................................................................................GCTACGGACGCTGGATGCGCGCCACT............................................... 26 0 2 1.00 2 1 1 0 0
...................................................GAGTATTAGATGTGTTTGGCA................................................................................. 21 0 2 1.00 2 2 0 0 0
......................................................................................................................GTCCGGATAGCGTTGCAG................. 18 0 2 1.00 2 0 0 2 0
..................................................................................TACGGACGCTGGATGCGCGCCACT............................................... 24 0 2 1.00 2 2 0 0 0
......................TGCTGGAGTCCTCGAGAGTCATTGGA......................................................................................................... 26 0 2 1.00 2 2 0 0 0
.............................................................................TTTGCTACGGACGCTGGATGCGCG.................................................... 24 0 2 1.00 2 2 0 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGGG.............................................................................. 25 0 2 1.00 2 2 0 0 0
..................................................TGAGTATTAGATGTGTTTGG................................................................................... 20 0 2 1.00 2 0 2 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGGGT............................................................................. 26 1 2 0.50 1 0 0 1 0
..GAAGGACGGAAGGACCGAATTGC................................................................................................................................ 23 1 2 0.50 1 0 0 1 0
..........................................................................................................TGCAACATTTATGTCCGGATAGCGTTG.................... 27 0 2 0.50 1 1 0 0 0
..............................................................................TTGCTACGGACGCTGGATGCGCGCC.................................................. 25 0 2 0.50 1 1 0 0 0
.....................TTGCTGGAGTCCTCGAGAGTCATA............................................................................................................ 24 1 2 0.50 1 0 0 0 1
.........................TGGAGTCCTCGAGAGTCATTGGAATT...................................................................................................... 26 2 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGGGAA............................................................................ 27 0 2 0.50 1 1 0 0 0
..............................................................................TTGCTACGGACGCTGGAT......................................................... 18 0 2 0.50 1 0 1 0 0
.....................TTGCTGGAGTCCTCGAGAGTCATTG........................................................................................................... 25 0 2 0.50 1 1 0 0 0
..........................................................................................................TGCAACATTTATGTCCGGATAGCGTTAAA.................. 29 2 2 0.50 1 1 0 0 0
........................CTGGAGTCCTCGAGAGTCATTGGAGG....................................................................................................... 26 0 2 0.50 1 1 0 0 0
...............................................................TGTTTGGCAGGGAATTTGCTACGGA................................................................. 25 0 2 0.50 1 0 1 0 0
..................................................GGAGTATTAGATGTGTTTGGCAGGG.............................................................................. 25 1 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGTGTTTGACAGGGA............................................................................. 26 1 2 0.50 1 1 0 0 0
..............................................................................TTGCTACGGACGCTGGATGCG...................................................... 21 0 2 0.50 1 0 1 0 0
...............................................................................TGCTACTGACGCTGGATGCGCGCCACT............................................... 27 1 2 0.50 1 1 0 0 0
............................................................................ATTTGCTACGGACGCTGGATGCGCGC................................................... 26 0 2 0.50 1 1 0 0 0
........................................................................................................................CCGGATAGCGTTGCAGGTAATTTATAGG..... 28 0 2 0.50 1 1 0 0 0
...............................................................................AGCTACGGACGCTGGATGCGCACCACT............................................... 27 2 2 0.50 1 1 0 0 0
.........................................................................................................TTGCAACATTTATGTCCGGATAGCGTTG.................... 28 0 2 0.50 1 1 0 0 0
...............ACCGAGTTGCTGGAGTCCTCGAGAGTCT.............................................................................................................. 28 1 2 0.50 1 1 0 0 0
..............................................................................TTGCTACGGACGCTGGATGCGCG.................................................... 23 0 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGTTGTGATTGGCA................................................................................. 22 2 2 0.50 1 0 1 0 0
.................................................CTGAGTATTAGATGTGTTTGGCAG................................................................................ 24 1 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGTGTTTGGTAG................................................................................ 23 1 2 0.50 1 0 1 0 0
.........................................................................................................TTGCAACAGTTAGGTCCGGAA........................... 21 3 2 0.50 1 1 0 0 0
..............................................GAGGTGAGTATTAGATGTGTTTG.................................................................................... 23 0 2 0.50 1 0 1 0 0
..................................................TGAGTATTAGATGTGTTTGTCAGGG.............................................................................. 25 1 2 0.50 1 1 0 0 0
..........................................................................................................TGCAACATTTATGTCCGGATCGCGTTG.................... 27 1 2 0.50 1 0 1 0 0
...............................................................................TGCTACGGACACTGGATGCGCGCCACT............................................... 27 1 2 0.50 1 1 0 0 0
...............................................................................TGCTACGGACGCTGGATGCGCGC................................................... 23 0 2 0.50 1 0 1 0 0
..............................................................................TTGCTACGGACGCTGGATGCGCGCCA................................................. 26 0 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGGGA............................................................................. 26 0 2 0.50 1 1 0 0 0
...............................................................................TGCTACGGACGCTGGATGCGCG.................................................... 22 0 2 0.50 1 0 1 0 0
..................................................TGAGTATTAGATGTGTTTGGCAGGGC............................................................................. 26 1 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGAGGTGTTTGGCAG................................................................................ 23 1 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGCTGTGTTTGGCA................................................................................. 22 1 2 0.50 1 1 0 0 0
...............................................................................TGCTACGGACGCTGGATGCGCGCC.................................................. 24 0 2 0.50 1 1 0 0 0
......................TGCTGGAGTCCTCGAGAGT................................................................................................................ 19 0 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGTGTTTGGGAGG............................................................................... 24 1 2 0.50 1 1 0 0 0
....................GTTGCTGGAGTCCTCGAGAGTCATTGG.......................................................................................................... 27 0 2 0.50 1 1 0 0 0
..................................................TGAGAATTAGATGTGTTTGGCAGG............................................................................... 24 1 2 0.50 1 1 0 0 0
.............................................................................TTTGCTACGGACGCTGGATGCGCGA................................................... 25 1 2 0.50 1 0 1 0 0
.........................................................................................................TTTCAACATTTATGTCCGGATAGCGTTG.................... 28 1 2 0.50 1 1 0 0 0
.............................................................................TTTGCTACGGACGCTGGATGCGCGCCACT............................................... 29 0 2 0.50 1 1 0 0 0
......................TGCTGGAGTCCTCGAGAGTCATTGGTT........................................................................................................ 27 2 2 0.50 1 1 0 0 0
..................................................TGAGTATTAGATGGGTTTGGC.................................................................................. 21 1 2 0.50 1 0 1 0 0
....................................................AGTATTCGATGTGTTTGG................................................................................... 18 1 3 0.33 1 0 1 0 0
...........................................TTGGAGGTTAGTATAAGA............................................................................................ 18 2 6 0.17 1 1 0 0 0
......................................................................................GACGCTGGATGCGCGCCACTTGC............................................ 23 0 20 0.05 1 1 0 0 0
....................................AGAGTCATTGGAGGTGAGTATT............................................................................................... 22 0 20 0.05 1 0 0 0 1

Anti-sense strand reads

GTCTTCCTGCCTTCCTGGCTCAACGACCTCAGGAGCTCTCAGTAACCTCCACTCATAATCTACACAAACCGTCCCTTAAACGATGCCTGCGACCTACGCGCGGTGAACGTTGTAAATACAGGCCTATCGCAACGTCCATTAAATATCCACCTC
************************************(((.((....((.((((.(((((....(((((((((((.....))))))..)))))..))))).)))).))....)).))).***********************************
Read size # Mismatch Hit Count Total Norm Total M054
female body
V114
embryo
V115
head
V113
male body
.................................AGCTCTCAGTAACCTCCACTCATAATC............................................................................................. 27 0 2 15.50 31 28 2 1 0
...................................CTCTCAGTAACCTCCACTCATAATC............................................................................................. 25 0 2 9.50 19 19 0 0 0
..................................GCTCTCAGTAACCTCCACTCATAATC............................................................................................. 26 0 2 8.50 17 15 1 0 1
....................................TCTCAGTAACCTCCACTCATAATC............................................................................................. 24 0 20 7.85 157 148 9 0 0
..CTTCCTGCCTTCCTGGCTCAACGACCT............................................................................................................................ 27 0 2 5.00 10 5 4 1 0
.....................................................................................................................ACAGGCCTATCGCAACGTCCATTAAA.......... 26 0 2 4.50 9 9 0 0 0
......................................................................................CTGCGACCTACGCGCGGTGAACGT........................................... 24 0 3 3.33 10 2 4 4 0
........................................................................................................................GGCCTATCGCAACGTCCATTAAA.......... 23 0 2 3.00 6 6 0 0 0
....TCCTGCCTTCCTGGCTCAACGACCT............................................................................................................................ 25 0 2 2.50 5 5 0 0 0
.................................AGCTCTCAGTAACCTCCACTCATAAT.............................................................................................. 26 0 2 2.50 5 5 0 0 0
......................................................................................CTGCGACCTACGCGCGGTGAACGTTGT........................................ 27 0 2 2.00 4 0 4 0 0
...TTCCTGCCTTCCTGGCTCAACGACCT............................................................................................................................ 26 0 2 2.00 4 4 0 0 0
....................................................................CCGTCCCTTAAACGATGCCTGCGACCT.......................................................... 27 0 2 1.50 3 3 0 0 0
...................................................................................................GCGGTGAACGTTGTAAATACAGGCCT............................ 26 0 2 1.50 3 3 0 0 0
.......................................................................................................................AGGCCTATCGCAACGTCCATTAAA.......... 24 0 2 1.50 3 3 0 0 0
.....................................................................................................................ACAGGCCTATCGCAACGTCCATTAAAT......... 27 0 2 1.50 3 3 0 0 0
......CTGCCTTCCTGGCTCAACGACCT............................................................................................................................ 23 0 2 1.00 2 1 1 0 0
.....CCTGCCTTCCTGGCTCAACGACCTCAGG........................................................................................................................ 28 0 2 1.00 2 2 0 0 0
...............................................................ACAAACCGTCCCTTAAACGATGCCT................................................................. 25 0 2 1.00 2 2 0 0 0
..........................................................................................GACCTACGCGCGGTGAACGTTGTAAAT.................................... 27 0 2 1.00 2 2 0 0 0
.................................TGCTCTCAGTAACCTCCACTCATAATC............................................................................................. 27 1 2 1.00 2 2 0 0 0
.....CCTGCCTTCCTGGCTCAACGACCT............................................................................................................................ 24 0 2 1.00 2 2 0 0 0
.....................................................................CGTCCCTTAAACGATGCCTGCGACCT.......................................................... 26 0 2 1.00 2 1 1 0 0
.................................................................AAACCGTCCCTTAAACGATGCCTGCGA............................................................. 27 0 2 1.00 2 2 0 0 0
.....CCTGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 25 0 2 1.00 2 2 0 0 0
...................................CTCTCAGTAACCTCCACTCATAAT.............................................................................................. 24 0 2 1.00 2 2 0 0 0
...TTCCTGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 27 0 2 1.00 2 2 0 0 0
....................................................................................................CGGTGAACGTTGTAAATACAGGCCTAT.......................... 27 0 2 1.00 2 1 1 0 0
.....................................CTCAGTAACCTCCACTCATAATC............................................................................................. 23 0 20 0.70 14 14 0 0 0
....................................TCTCAGTAACCTCCACTCATAAT.............................................................................................. 23 0 20 0.55 11 11 0 0 0
..................................TCTCTCAGTAACCTCCACTCATAAT.............................................................................................. 25 1 2 0.50 1 1 0 0 0
....................................................................CCGTCCCTTAAACGATGCCTGCGA............................................................. 24 0 2 0.50 1 1 0 0 0
.........................................................................................................................GCCTATCGCAACGTCCATTAAA.......... 22 0 2 0.50 1 1 0 0 0
....................................................................................................................TACAGGCCTATCGCAACGTCCATTAAA.......... 27 0 2 0.50 1 1 0 0 0
......................................................................................................................TAGGCCTATCGCAACGTCCATTAAA.......... 25 1 2 0.50 1 1 0 0 0
.....................................................................CGTCCCTTAAACGATGCCTGCGACCTAC........................................................ 28 0 2 0.50 1 1 0 0 0
.................................AGCTCTCAGTAACCTCCACTCATAAGC............................................................................................. 27 1 2 0.50 1 1 0 0 0
........................................................................................................................GGCCTATCGCAACGTCCATTAA........... 22 0 2 0.50 1 1 0 0 0
........................GACCTCAGGAGCTCTCAGTAACCT......................................................................................................... 24 0 2 0.50 1 1 0 0 0
.....CCTGCCTTCCTGGCTCAACGACCTCAGGA....................................................................................................................... 29 0 2 0.50 1 1 0 0 0
...................................................................ACCGTCCCTTAAACGATGCCTGCGACCT.......................................................... 28 0 2 0.50 1 1 0 0 0
...................................................................ACCGTCCCTTAAACGATGCCT................................................................. 21 0 2 0.50 1 1 0 0 0
..CTTCCTGCCTTCCTGGCTCAACGA............................................................................................................................... 24 0 2 0.50 1 1 0 0 0
.................................AGCTCTCACTAACCTCCACTCATAATC............................................................................................. 27 1 2 0.50 1 1 0 0 0
.........CCTTCCTGGCTCAACGACCTCAGG........................................................................................................................ 24 0 2 0.50 1 1 0 0 0
..............................................................................................................TGTAAATACAGGCCTATCGCAACGT.................. 25 0 2 0.50 1 0 1 0 0
.....CCTGCCTTCCTGGCTCAACGACCTCAG......................................................................................................................... 27 0 2 0.50 1 1 0 0 0
..................................................................AACCGTCCCTTAAACGATGCCTGCGAC............................................................ 27 0 2 0.50 1 1 0 0 0
....TCCTCCCTTCCTGGCTCAACGACCT............................................................................................................................ 25 1 2 0.50 1 1 0 0 0
.........CCTTCCTGGCTCAACGACCTCAGGAG...................................................................................................................... 26 0 2 0.50 1 1 0 0 0
.....................................................................................................................ATAGGCCTATCGCAACGTCCATTAAA.......... 26 1 2 0.50 1 1 0 0 0
.............................................................................................................................ATCGCAACGTCCATTAAATATCCAC... 25 0 2 0.50 1 0 1 0 0
.....................................................................CGTCCCTTAAACGATGCCTGCGAC............................................................ 24 0 2 0.50 1 0 1 0 0
............................................................................................CCTACGCGCGGTGAACGTTGTAAAT.................................... 25 0 2 0.50 1 1 0 0 0
.......................CGACCTCAGGAGCTCTCAGTAACCT......................................................................................................... 25 0 2 0.50 1 1 0 0 0
.............................................................ACACAAACCGTCCCTTAAACGATGCCT................................................................. 27 0 2 0.50 1 1 0 0 0
...............................CAAGCTCTCAGTAACCTCCACTCATAATC............................................................................................. 29 2 2 0.50 1 1 0 0 0
..........................................................................................................................CCTATCGCAACGTCCATTAAA.......... 21 0 2 0.50 1 1 0 0 0
................................................................................................CGCGCGGTGAACGTTGTAA...................................... 19 0 2 0.50 1 1 0 0 0
.........................................................................................CGACCTACGCGCGGTGAACGTTGTA....................................... 25 0 2 0.50 1 1 0 0 0
......................................................................GTCCCTTAAACGATGCCTGCGACCT.......................................................... 25 0 2 0.50 1 1 0 0 0
.......................................................................TCCCTTAAACGATGCCTGCGACCT.......................................................... 24 0 2 0.50 1 1 0 0 0
.............................................................................................CTACGCGCGGTGAACGTTGTAAAT.................................... 24 0 2 0.50 1 1 0 0 0
.......TGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 23 0 2 0.50 1 0 1 0 0
..........CTTCCTGGCTCAACGACCTCAGGA....................................................................................................................... 24 0 2 0.50 1 1 0 0 0
....TCCTGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...............................................................AAAAACCGTCCCTTAAACGATACCTGCGA............................................................. 29 2 2 0.50 1 1 0 0 0
..CTTCCTGCCTTCCTGGCTCAACGACC............................................................................................................................. 26 0 2 0.50 1 1 0 0 0
........................................................................................................................GGCCTATCGCAACGTCCATT............. 20 0 2 0.50 1 1 0 0 0
.............................................................................................................TTGTAAATACAGGCCTATCGCAACGT.................. 26 0 2 0.50 1 1 0 0 0
....TCCTGCCTTCCTGGCTCAACGACCTCA.......................................................................................................................... 27 0 2 0.50 1 1 0 0 0
................................GAGCTCTCAGTAACCTCCACTCATAATC............................................................................................. 28 0 2 0.50 1 1 0 0 0
...........................................................................................................CGTTGTAAATACAGGCCTATCGCA...................... 24 0 2 0.50 1 0 1 0 0
.........................................................................................CGACCTACGCGCGGTGAACGTTGTAAAT.................................... 28 0 2 0.50 1 1 0 0 0
..CTTCCTGCCTTCCTGGCTC.................................................................................................................................... 19 0 2 0.50 1 0 0 1 0
..CTTCCTGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 28 0 2 0.50 1 1 0 0 0
.......................................................................................................................TGGCCTATCGCAACGTCCATTAAA.......... 24 1 2 0.50 1 1 0 0 0
.........................................................................................CGACCTACGCGCGGTGAACGTTGTAA...................................... 26 0 2 0.50 1 1 0 0 0
..................................GCTCTCAGTAACCTCCACTCATCATC............................................................................................. 26 1 2 0.50 1 1 0 0 0
......................................................................................................................CAGGCCTATCGCAACGTCCATTAAA.......... 25 0 2 0.50 1 1 0 0 0
..................................................................................................CGCGGTGAACGTTGTAAATACAGGCCT............................ 27 0 2 0.50 1 1 0 0 0
...............................................................................................ACGCGCGGTGAACGTTGTAAATAC.................................. 24 0 2 0.50 1 0 0 1 0
......CTGCCTTCCTGGCTCAACGACCTCTG......................................................................................................................... 26 1 2 0.50 1 1 0 0 0
....................CAACGACCTCAGGAGCTCTCAGTAACCT......................................................................................................... 28 0 2 0.50 1 1 0 0 0
.......................................................................................................................AGTCCTATCGCAACGTCCATTAAATAT....... 27 1 2 0.50 1 1 0 0 0
...............................................................................................................................CGCAACGTCCATTAAATATCCACCTC 26 0 2 0.50 1 1 0 0 0
...............TGGCTCAACGACCTCAGGAGCTCT.................................................................................................................. 24 0 2 0.50 1 1 0 0 0
......CTGCCTTCCTGGCTCAACGACCTCAGGA....................................................................................................................... 28 0 2 0.50 1 1 0 0 0
......................................................................................CTGCGACCTACGCGCGGTGAACGTTG......................................... 26 0 2 0.50 1 0 1 0 0
....ACCTGCCTTCCTGGCTCAACGACCTC........................................................................................................................... 26 1 2 0.50 1 1 0 0 0
.....................................................................CGTCCGTTAAACGATGCCTGCGACCT.......................................................... 26 1 2 0.50 1 1 0 0 0
...................................CTCTGAGTAACCTCCACTCATAATC............................................................................................. 25 1 2 0.50 1 1 0 0 0
...TTCCTGCCTTCCTGGCTCAACGCCCT............................................................................................................................ 26 1 2 0.50 1 1 0 0 0
......CTGCCTTCCTGGCTCAACGACCTCA.......................................................................................................................... 25 0 2 0.50 1 1 0 0 0
............................................................................................CCTACGCGCGGTTAACGTTGTAAAT.................................... 25 1 2 0.50 1 1 0 0 0
......................................................................................CTGCGACGTACGCGCGGTGAACGT........................................... 24 1 3 0.33 1 1 0 0 0
...................................CTCTCAGTAACCTCCACTCATAATT............................................................................................. 25 1 4 0.25 1 1 0 0 0
......................................TCAGTAACCTCCACTCATAATC............................................................................................. 22 0 20 0.15 3 3 0 0 0
....................................TCTCAGTAACCTCCACTCATCATC............................................................................................. 24 1 20 0.10 2 2 0 0 0
.....................................................................................................................ACAGGCCTGTCGCAACGTCCATTAAAT......... 27 1 19 0.05 1 1 0 0 0
..................................AATCTCAGTAACCTCCACTCATAATC............................................................................................. 26 2 20 0.05 1 1 0 0 0
.......................................................................................TGGGACCTCCGCGCGGTTA............................................... 19 3 20 0.05 1 1 0 0 0
....................................TCTCAGTAACCTCCACTAATAATC............................................................................................. 24 1 20 0.05 1 1 0 0 0
.........................................GTAACCTCCACTCATAATC............................................................................................. 19 0 20 0.05 1 1 0 0 0
....................................TCTCATTAACCTCCACTCATAATC............................................................................................. 24 1 20 0.05 1 1 0 0 0
.....................................CTCAGTAACCTCCACTCATAA............................................................................................... 21 0 20 0.05 1 1 0 0 0
......................................TCAGTAACCTTCACTCATAATC............................................................................................. 22 1 20 0.05 1 0 1 0 0
....................................TCTCAGTAATCTCCACTCATAATC............................................................................................. 24 1 20 0.05 1 1 0 0 0
....................................TCTCAGTAACCTCCAATCATAATC............................................................................................. 24 1 20 0.05 1 1 0 0 0
....................................TCTCAGTAACCTCCACTCATAATCCGAAC........................................................................................ 29 3 20 0.05 1 1 0 0 0
....................................TCACATTAACCTCCACTCATCATC............................................................................................. 24 3 20 0.05 1 1 0 0 0
....................................TCTCAGTAACCTCCACTCATAATT............................................................................................. 24 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_284:707-859 - dse_119 CAGAAG---------------------------------------------GACGGAAGGACCGAGTTGCTGGAGTCCTCGAGAGTCATTG-GAGGTGAGTATTAG---------------------------------ATGTGTTTGGCAGGGAATTTGCTACGGACGCTGGATGCGCGCCACTTGCAACATTTATGTCCGGATAGCGTTGCAGGTAATT--TATAGGTGGAG-------
droSim2 node_63468:111-258 + CCGCATCCACAATTTTATTTTGCCTTTGATTACA-ATAAATGTAATATATAGGTACAATAATTTGAATT-TATAGTTTAACATAG----CTTGGGGTGAGTTTGGGGCTTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAGGCA-
dm3 chrYHet:277403-277553 + CCGCATCCACGATT-TATTTTGCCTTTGATTACA-GTGTGTGCAATATATAGGTACAATTATTTAAATTTTAGAGTTGAACATTG----AGTGGGGTGAGTTTGGGGCTTGGACAT---AGTTAGTATTAATA-T-----------------------------------------------------------------------GTA------TT---AAGTATTTTTTATGTAAGCGT
droEre2 scaffold_2047:4966-5118 + CCGTTTCCACAATT-TAT-TTGCCTTTGATTACATAGATATGCAATATATAGGTACAAGAATTTACATTTTTGAGTTTAACATTG----TG-GAGGTGAGTTTTGGGAATGGACAATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGTATTTTCTTTG-------
droYak3 v2_chr2h_random_021:121855-122007 - CAGAAG---------------------------------------------GACGGAAGCAACGAGTCGCTGGAGGCCTCAGGAGTCATCG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGGCC--CAATTTGTTGCAACCGCAAGATGCGCGCCACTAGCAACATTTGAATCGGGCCGGCGTTGCAGGTGAGTAGTATTCGTGGTG-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CAGAAG---------------------------------------------GACGGAAGGACCGAGTTGCTGGAGTCCTCGAGAGTCATTG-GAGGTGAGTATTAG---------------------------------ATGTGTTTGGCAGGGAATTTGCTACGGACGCTGGATGCGCGCCACTTGCAACATTTATGTCCGGATAGCGTTGCAGGTAATT--TATAGGTGGAG-------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
............................................................................................................................................................TTTGCTACGGACGCTGGATGCGCGC............................................................25215.503160205
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAG.........................................................................................23215.003027030
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGG........................................................................................2429.001816020
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCA..........................................................................................2226.50137141
............................................................................................................................................................TTTGCTACGGACGCTGGATGCGCGCC...........................................................2625.00108011
..............................................................................................................................................................TGCTACGGACGCTGGATGCGCGCCACT........................................................2724.5098001
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGC...........................................................................................2124.0082051
.............................................................................................................................................................TTGCTACGGACGCTGGATGCGCGC............................................................2423.0064110
..............................................................................................................................................................TGCTACGGACGCTGGATGCGCGCCAC.........................................................2622.5055000
............................................................................................................................................................................................AACATTTATGTCCGGATAGCGTTG.............................2422.0044000
.............................................................................................................................................................TTGCTACGGACGCTGGATGCGC..............................................................2222.0040040
.................................................................................................GAGTATTAG---------------------------------ATGTGTTTGGCAG.........................................................................................2221.5033000
...............................................................................................................................................................GCTACGGACGCTGGATGCGCGCCACT........................................................2621.0021010
.................................................................................................GAGTATTAG---------------------------------ATGTGTTTGGCA..........................................................................................2121.0022000
.....................................................................................................................................................................................................GTCCGGATAGCGTTGCAG..........................1821.0020002
.................................................................................................................................................................TACGGACGCTGGATGCGCGCCACT........................................................2421.0022000
...................................................................TGCTGGAGTCCTCGAGAGTCATTG-GA...................................................................................................................................................2621.0022000
............................................................................................................................................................TTTGCTACGGACGCTGGATGCGCG.............................................................2421.0022000
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGGG.......................................................................................2521.0022000
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGG............................................................................................2021.0020020
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGGGT......................................................................................2620.5010001
.........................................................................................................................................................................................TGCAACATTTATGTCCGGATAGCGTTG.............................2720.5011000
.............................................................................................................................................................TTGCTACGGACGCTGGATGCGCGCC...........................................................2520.5011000
..................................................................TTGCTGGAGTCCTCGAGAGTCATA.......................................................................................................................................................2420.5010100
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGGGAA.....................................................................................2720.5011000
.............................................................................................................................................................TTGCTACGGACGCTGGAT..................................................................1820.5010010
..................................................................TTGCTGGAGTCCTCGAGAGTCATTG-.....................................................................................................................................................2520.5011000
.....................................................................CTGGAGTCCTCGAGAGTCATTG-GAGG.................................................................................................................................................2620.5011000
..............................................................................................................................................TGTTTGGCAGGGAATTTGCTACGGA..........................................................................2520.5010010
.............................................................................................................................................................TTGCTACGGACGCTGGATGCG...............................................................2120.5010010
...........................................................................................................................................................ATTTGCTACGGACGCTGGATGCGCGC............................................................2620.5011000
.......................................................................................................................................................................................................CCGGATAGCGTTGCAGGTAATT--TATAGG............2820.5011000
........................................................................................................................................................................................TTGCAACATTTATGTCCGGATAGCGTTG.............................2820.5011000
............................................................ACCGAGTTGCTGGAGTCCTCGAGAGTCT.........................................................................................................................................................2820.5011000
.............................................................................................................................................................TTGCTACGGACGCTGGATGCGCG.............................................................2320.5011000
............................................................................................GAGGTGAGTATTAG---------------------------------ATGTGTTTG.............................................................................................2320.5010010
..............................................................................................................................................................TGCTACGGACGCTGGATGCGCGC............................................................2320.5010010
.............................................................................................................................................................TTGCTACGGACGCTGGATGCGCGCCA..........................................................2620.5011000
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGGGA......................................................................................2620.5011000
..............................................................................................................................................................TGCTACGGACGCTGGATGCGCG.............................................................2220.5010010
................................................................................................TGAGTATTAG---------------------------------ATGTGTTTGGCAGGGC......................................................................................2620.5011000
..............................................................................................................................................................TGCTACGGACGCTGGATGCGCGCC...........................................................2420.5011000
...................................................................TGCTGGAGTCCTCGAGAGT...........................................................................................................................................................1920.5011000
.................................................................GTTGCTGGAGTCCTCGAGAGTCATTG-G....................................................................................................................................................2720.5011000
............................................................................................................................................................TTTGCTACGGACGCTGGATGCGCGA............................................................2520.5010010
............................................................................................................................................................TTTGCTACGGACGCTGGATGCGCGCCACT........................................................2920.5011000
...................................................................TGCTGGAGTCCTCGAGAGTCATTG-GTT..................................................................................................................................................2720.5011000
.....................................................................................................................................................................GACGCTGGATGCGCGCCACTTGC.....................................................23200.0511000
.................................................................................AGAGTCATTG-GAGGTGAGTATT.........................................................................................................................................22200.0510100
droSim2
CCGCATCCACAATTTTATTTTGCCTTTGATTACA-ATAAATGTAATATATAGGTACAATAATTTGAATT-TATAGTTTAACATAG----CTTGGGGTGAGTTTGGGGCTTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAGGCA-SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
.............................................................................TAACATAG----CTTGGGGTGAGTTTG.........................................................................................................................................233439.67131900182104004466172400000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGG........................................................................................................................................243317.33952003116120012416612083211900000
..................TTTGCCTTTGATTACA-ATA...........................................................................................................................................................................................................197288.1420170000190810600003000000
.............................................................................TAACATAG----CTTGGGGTGAG.............................................................................................................................................193261.3378400017380000044100000
..................TTTGCCTTTGATTACA-AT............................................................................................................................................................................................................189213.001917000018467100000000000
.............................................................................TAACATAG----CTTGGGGTGAGT............................................................................................................................................203203.6761100025330000174100000
.............................................................................TAACATAG----CTTGGGGTGAGTT...........................................................................................................................................213183.6755100064510545178100000
.............................................................................TAACATAG----CTTGGGGTGAGTTT..........................................................................................................................................223182.0054600184920431235000000
..................TTTGCCTTTGATTACA-ATAAA.........................................................................................................................................................................................................216164.679880000988000000000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---.....................283145.674370003005124353816000000
.............................................................................TAACATAG----CTTGGGGTGA..............................................................................................................................................183141.00423000136941000011100000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................253116.33349000410043394119164110000
..................TTTGCCTTTGATTACA-ATAA..........................................................................................................................................................................................................207113.71796000068910600001000000
..................TTTGCCTTTGATTACA-ATAAAT........................................................................................................................................................................................................22687.0052200014685200001000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---.....................29344.001320000002598531000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------G.........................27343.00129000000357012111000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTT.........................................................................................................25336.6711010410086313173000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGG......................................................................................................................................26330.0090000170010109238130000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................27327.0081003250019120220000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTT.........................................................................................................24323.006900010092914133000000
..................TTTGCCTTTGATTACA-ATAAATG.......................................................................................................................................................................................................23620.0012001012104000003000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------G.........................28319.33580000001237540000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTA........................................................................................................26319.00570000001040250000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGGCT....................................................................................................................................28317.67530003002525000000000
..............................................................................AACATAG----CTTGGGGTGAGTTTG.........................................................................................................................................22316.0048000640000002000000
.............................................................................TAACATAG----CTTGGGGT................................................................................................................................................16314.6744000000000044000000
............................................................................TTAACATAG----CTTGGGGTGAG.............................................................................................................................................20314.3343000004101001000000
..............................................................................AACATAG----CTTGGGGTGAG.............................................................................................................................................18313.6741000041000000000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---T....................29313.0039000000629220000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGT..........................................................................................................24312.0036000000522144000000
..................................................................................TAG----CTTGGGGTGAGTTTGG........................................................................................................................................19412.0048000040000107000000
............................................................................TTAACATAG----CTTGGGGTGAGTTTGG........................................................................................................................................25312.0036000200126835000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTA........................................................................................................25311.6735000000820133000000
..................TTTGCCTTTGATTACA-ATAAATGT......................................................................................................................................................................................................24311.0033000224000007000000
.....TCCACAATTTTATTTTGCCTTT......................................................................................................................................................................................................................22310.6732000032000000000000
.................................................TAGGTACAATAATTTGAATT-TATAGTT....................................................................................................................................................................27210.5021000000610041000000
............................................................................TTAACATAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................2639.672900010075717010000
...................TTGCCTTTGATTACA-ATAAAT........................................................................................................................................................................................................2168.8353000152000000000000
...................TTGCCTTTGATTACA-ATA...........................................................................................................................................................................................................1877.5753000053000000000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGT..........................................................................................................2335.671700000061172000000
....................................................................................G----CTTGGGGTGAGTTTGG........................................................................................................................................1745.0020000000000020000000
....................................................................................G----CTTGGGGTGAGTTTGGG.......................................................................................................................................1844.7519000000001018000000
..............................................................................AACATAG----CTTGGGGTGAGTTTGG........................................................................................................................................2334.331300090010111000000
......................................................................................................TGGGGCTTGGACAA---AGTTAGTATT................................................................................................................2434.331300000035320000000
...............................................TATAGGTACAATAATTTGAATT-TA.........................................................................................................................................................................2434.001200000044130000000
..........................................................................................................................TAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATT..............2543.751500000014640000000
..................................................................................TAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................2043.5014000000001013000000
................................................................................................TGAGTTTGGGGCTTGGACAA---AGTT......................................................................................................................2423.50700000002050000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTTGG........................................................................................................................................2633.331000000013330000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGT.......................................................................................................................................2533.00900000000009000000
.................................................TAGGTACAATAATTTGAATT-TATAGT.....................................................................................................................................................................2633.00900000012240000000
....................................................................................G----CTTGGGGTGAGTTTG.........................................................................................................................................1642.7511000000000011000000
.................................................................................................................................TAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTT.............1942.751100000028100000000
............................................................................TTAACATAG----CTTGGGGTGAGTTTGGGG......................................................................................................................................2732.67800000031301000000
..................TTTGCCTTTGATTACA-ATAAATGTAA....................................................................................................................................................................................................2632.67800060000002000000
.....................................................................................................TTGGGGCTTGGACAA---AGTTAGTATT................................................................................................................2532.67800000004130000000
.................................................................................ATAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................2142.5010000000000010000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................2732.33700000001420000000
..........................................................................GTTTAACATAG----CTTGGGGTGAGTT...........................................................................................................................................2432.33700020000004010000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAG...........................................................................................................2332.33700000002221000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGA.......................................................................................................................................2532.33700010022011000000
..........................................................................................TTGGGGTGAGTTTGGG.......................................................................................................................................1642.25900000000009000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGA......................................................................................................................................2632.00600000002013000000
.........................................................................AGTTTAACATAG----CTTGGGGTGAGTT...........................................................................................................................................2532.00600000020201010000
............................................................................TTAACATAG----CTTGGGGTGAGTTTGGGGCT....................................................................................................................................2932.00600010050000000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGGA.....................................................................................................................................2732.00600000024000000000
........................................................................................................................................AA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAG....1842.00800008000000000000
.............................................TATATAGGTACAATAATTTGAATT-TA.........................................................................................................................................................................2632.00600010012110000000
...................TTGCCTTTGATTACA-ATAAATGT......................................................................................................................................................................................................2332.00600006000000000000
........................................................................................................................................AA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAGG...1942.00800008000000000000
..................................................................................TAG----CTTGGGGTGAGTTTGGGG......................................................................................................................................2142.00800000000008000000
....................................................................................................TTTGGGGCTTGGACAA---AGTTAGTATT................................................................................................................2631.67500000003020000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGT......................................................................................................................................2631.67500010011002000000
..............................................................................AACATAG----CTTGGGGTGAGTTTGGG.......................................................................................................................................2431.67500010000202000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTTGGGG......................................................................................................................................2831.67500000001400000000
............................................................................TTAACATAG----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................2831.67500010040000000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGT........................................................................................................................................2431.67500010000004000000
.................................................................................ATAG----CTTGGGGTGAGTTTG.........................................................................................................................................1941.50600000000006000000
....................................................................................G----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................2041.50600000000006000000
.....................................................TACAATAATTTGAATT-TATAGTT....................................................................................................................................................................2321.50300000000030000000
..................................................................................TAG----CTTGGGGTGAGTTTGGGGCTTG..................................................................................................................................2541.50600010000005000000
.................................................................................ATAG----CTTGGGGTGAGTTTGG........................................................................................................................................2041.50600000000006000000
.............................................................TTTGAATT-TATAGTTTAACATAG----CTTGGGG.................................................................................................................................................3021.50300000012000000000
...........................................................................................................CTTGGACAA---AGTTAGTATTTAAAGTTA........................................................................................................2731.33400000003010000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---T....................3031.33400000012010000000
..........................................................................................TTGGGGTGAGTTTGGGG......................................................................................................................................1741.25500000000005000000
...................................................................................................................A---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTA................2741.25500000005000000000
..........................................................................................TTGGGGTGAGTTTGG........................................................................................................................................1541.25500000000005000000
..........................................................................................TTGGGGTGAGTTTGGGGCTTGGA................................................................................................................................2331.00300000002001000000
...............................................TATAGGTACAATAATTTGAATT-TATA.......................................................................................................................................................................2631.00300000001101000000
......................................................................................................TGGGGCTTGGACAA---AGTTAGTATTTA..............................................................................................................2631.00300000001011000000
..................................................................................TAG----CTTGGGGTGAGTTTGGGGCTT...................................................................................................................................2441.00400000010101010000
..........................................TAATATATAGGTACAATAATTTGAAT.............................................................................................................................................................................2631.00300100001100000000
..........................................................TAATTTGAATT-TATAGTT....................................................................................................................................................................1821.00200000002000000000
.................................................................................ATAG----CTTGGGGTGAGTTTGGGG......................................................................................................................................2241.00400000000004000000
..............................................................................AACATAG----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................2631.00300020000001000000
....................................................................T-TATAGTTTAACATAG----CTTGGGGTGAGTT...........................................................................................................................................2921.00200000001010000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAG...........................................................................................................2231.00300000002100000000
...........................................................................................TGGGGTGAGTTTGGGGCTTGGACAA---..........................................................................................................................2521.00200000000200000000
................................................................................................TGAGTTTGGGGCTTGGACAA---AGT.......................................................................................................................2321.00200000000020000000
...........................................................................................................CTTGGACAA---AGTTAGTATTTAAAGT..........................................................................................................2531.00300000010020000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGC.......................................................................................................................................2531.00300000001002000000
...............................................................TGAATT-TATAGTTTAACATAG----CTTGGGG.................................................................................................................................................2821.00200000002000000000
..........................................................................................TTGGGGTGAGTTTGGGGCTTGGACA..............................................................................................................................2531.00300000010200000000
.........................................................................................CTTGGGGTGAGTTTGG........................................................................................................................................1641.00400000000013000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGA........................................................................................................................................2431.00300000012000000000
..............................TACA-ATAAATGTAATATATAGGTACAATA.....................................................................................................................................................................................2931.00300000020010000000
.........................................................................AGTTTAACATAG----CTTGGGGTGAGTTT..........................................................................................................................................2631.00300010000001010000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------..........................2731.00300000011010000000
...............................................................................................................................TTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTA.....2641.00400000021010000000
..................................................................................TAG----CTTGGGGTGAGTTTG.........................................................................................................................................1841.00400000000004000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------..........................2631.00300000012000000000
...............................................TATAGGTACAATAATTTGAATT-TATAGTT....................................................................................................................................................................2921.00200000000011000000
.........................................................................AGTTTAACATAG----CTTGGGGTGAGT............................................................................................................................................2431.00300000000002010000
...........................................................................................TGGGGTGAGTTTGGGGCTTGGACA..............................................................................................................................2470.86600000014100000000
.................................................................................................................................TAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTA.....2440.75300000011100000000
................................................................................................................................TTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTA.....2540.75300000001020000000
....................................................................................G----CTTGGGGTGAGTTTGGA.......................................................................................................................................1840.75300000000003000000
..................................................................................TAG----CTTGGGGTGAGTTT..........................................................................................................................................1740.75300000000003000000
...................................................................................................GTTTGGGGCTTGGACA..............................................................................................................................1680.75600000014001000000
........................................................................................................................................AA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAGGCA-2140.75300100000002000000
...................................................................................AG----CTTGGGGTGAGTTTGGG.......................................................................................................................................1940.75300000000003000000
.................................................................................ATAG----CTTGGGGTGAGT............................................................................................................................................1640.75300000000003000000
.............................................................................................................TGGACAA---AGTTAGTATT................................................................................................................1730.67200000000101000000
..............................................................................AACATAG----CTTGGGGTGAGTT...........................................................................................................................................2030.67200010000001000000
...........................................................................................................CTTGGACAA---AGTTAGTATTTAAAGTT.........................................................................................................2630.67200000002000000000
.............................................................................TAACATAG----CTTGGGGTGAGA............................................................................................................................................2030.67200000001010000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAA............................................................................................................2130.67200000000002000000
..................TTTGCCTTTGATTACA-ATAAATGTAATA..................................................................................................................................................................................................2830.67200020000000000000
.............................................TATATAGGTACAATAATTTGAATT-...........................................................................................................................................................................2430.67200000002000000000
..................TTTGCCTTTGATTACA-ATAAATGTAAT...................................................................................................................................................................................................2730.67200020000000000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTT..........................................................................................................................................2430.67200010000010000000
..........................................................................................TTGGGGTGAGTTTGGGGCTTGGAC...............................................................................................................................2430.67200000000002000000
...............................................................................ACATAG----CTTGGGGTGAGTTTGG........................................................................................................................................2230.67200000000002000000
..........................................................................GTTTAACATAG----CTTGGGGTGAGT............................................................................................................................................2330.67200010000001000000
.............................................................................TAACATAG----CTTGGGG.................................................................................................................................................1530.67200000010001000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TA...................3030.67200000002000000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTT........................................................................................................2530.67200000002000000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................2930.67200000011000000000
.............................................................................TAACATAG----CTTGGGGTGAGTTA..........................................................................................................................................2230.67200000000002000000
..........................................................................GTTTAACATAG----CTTGGGGTGAGTTT..........................................................................................................................................2530.67200010000001000000
...............................................................................ACATAG----CTTGGGGTGAGTTTGGGGCT....................................................................................................................................2630.67200000011000000000
.................................................TAGGTACAATAATTTGAATT-TATA.......................................................................................................................................................................2430.67200000000110000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGTC......................................................................................................................................2630.67200000000002000000
.................................................TAGGTACAATAATTTGAATT-TAT........................................................................................................................................................................2330.67200000001010000000
...........................................................................TTTAACATAG----CTTGGGGTGAGTTTGGGGCT....................................................................................................................................3030.67200000011000000000
.............................................................................TAACATAG----CTTGGGGTGAGTC...........................................................................................................................................2130.67200000000002000000
............................................................................TTAACATAG----CTTGGGGTGAGTTTG.........................................................................................................................................2430.67200000001001000000
............................................................................TTAACATAG----CTTGGGGTG...............................................................................................................................................1830.67220000000000000000
...................................................................................AG----CTTGGGGTGAGTTTG.........................................................................................................................................1740.50200000000002000000
...........................................................AATTTGAATT-TATAGTT....................................................................................................................................................................1720.50100000000001000000
.........................................................ATAATTTGAATT-TATAGTT....................................................................................................................................................................1920.50100000000001000000
..............................................................................................GGTGAGTTTGGGGCTTGGACAA---AGT.......................................................................................................................2520.50100000001000000000
................................................................................................................................TTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTT.............2040.50200000002000000000
..................................................................................TAG----CTTGGGGTGAGTTTGGGGC.....................................................................................................................................2240.50200200000000000000
.........................................................................................CTTGGGGTGAGTTTGGG.......................................................................................................................................1740.50200000000002000000
................................................................................................TGAGTTTGGGGCTTGGACAA---A.........................................................................................................................2120.50100000000010000000
...........................................................................................TGGGGTGAGTTTGGGGCTTGGACAA---AG........................................................................................................................2720.50100000000010000000
.............................................................................................GGGTGAGTTTGGGGCT....................................................................................................................................1680.50400000000004000000
...................................................................................AG----CTTGGGGTGAGTTTGG........................................................................................................................................1840.50200000000002000000
.............................................................TTTGAATT-TATAGTTTAACATAG----CT......................................................................................................................................................2520.50100000001000000000
.................................................................................................................................TAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTTTT---GTAGGCA-2840.50200000011000000000
..................................................................................................................AA---AGTTAGTATTTAAAGTTA........................................................................................................2040.50200000000002000000
.........................................................................................CTTGGGGTGAGTTTG.........................................................................................................................................1540.50200000000002000000
..................................................................................................................AA---AGTTAGTATTTAAAGTT.........................................................................................................1940.50200000000002000000
..................................................................................TAG----CTTGGGGTGAGTTTGGGGCT....................................................................................................................................2340.50200000001010000000
................ATTTTGCCTTTGATTACA-ATAAA.........................................................................................................................................................................................................2360.50300000002010000000
........................................................................................................................GTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---.....................2040.50200000000002000000
....................................................................................G----CTTGGGGTGAGTTTGGT.......................................................................................................................................1840.50200000000002000000
...........................................................................................TGGGGTGAGTTTGGGGCT....................................................................................................................................1880.50400000000004000000
.....................................................TACAATAATTTGAATT-TATAGTTA...................................................................................................................................................................2420.50100000000010000000
...............................................................................................................................TTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATTT.............2140.50200000020000000000
..........................................................................................TTGGGGTGAGTTTGGGGCTTGGACAA---..........................................................................................................................2620.50100000001000000000
...................................................GGTACAATAATTTGAATT-TATAGTT....................................................................................................................................................................2520.50100000001000000000
...................................................................TT-TATAGTTTAACATAG----CTTGGGGTGAGTT...........................................................................................................................................3020.50100000000100000000
....................................................................................G----CTTGGGGTGAGTTTGGGG......................................................................................................................................1940.50200000000002000000
...........................................................................................TGGGGTGAGTTTGGGGCTTGGACAA---A.........................................................................................................................2620.50100000000010000000
.........................................................................................................................TTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---TAGTATT..............2640.50200000001100000000
...........................................................................................TGGGGTGAGTTTGGGGCTTGGAC...............................................................................................................................2370.43300000001002000000
...........................................................................................TGGGGTGAGTTTGGGGC.....................................................................................................................................1780.38300000000003000000
...................TTGCCTTTGATTACA-ATAAATGTAA....................................................................................................................................................................................................2530.33100010000000000000
..............................................................................AACATAG----CTTGGGGTGAGTTT..........................................................................................................................................2130.33100010000000000000
...............................................TATAGGTACAATAATTTGAATT-T..........................................................................................................................................................................2330.33100000000010000000
.........................................................................AGTTTAACATAG----CTTGGGGTGAG.............................................................................................................................................2330.33100000000001000000
..................TTTGCCTTTGATTACA-ATAAATGTA.....................................................................................................................................................................................................2530.33100010000000000000
............................................................................................................TTGGACAA---AGTTAGTATTTAAAGTTAG-----------------------------------------------------------------------------A.........................2830.33100000001000000000
.................................................................................................................CAA---AGTTAGTATTTAAAGTT.........................................................................................................2030.33100000000001000000
............................................................................................................TTGGACAA---AGTTAGTA..................................................................................................................1630.33100000001000000000
.................................................TAGGTACAATAATTTGAATT-TATAAA.....................................................................................................................................................................2630.33100000000010000000
..............................................................................AACATAG----CTTGGGGTGAGTTTGGGGCTT...................................................................................................................................2830.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTGAGG............................................................................................................................................2030.33100000000001000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAT-----------------------------------------------------------------------------T.........................2730.33100000001000000000
............................................................................TTAACATAG----CTTGGGGTGAGT............................................................................................................................................2130.33100000001000000000
......................................................................................................TGGGGCTTGGACAA---AGTTAGTATTTAAAGT..........................................................................................................3030.33100000001000000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGTA......................................................................................................................................2630.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGAAA......................................................................................................................................2630.33100000000010000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGAGC....................................................................................................................................2830.33100000000001000000
.............................................................................................................TGGACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------A.........................2730.33100000001000000000
.............................................................................TAACATAG----CTTGGGGA................................................................................................................................................1630.33100000001000000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTC.........................................................................................................................................2330.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTG...............................................................................................................................................1730.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTGAA.............................................................................................................................................1930.33100000000001000000
....................................................................................................TTTGGGGCTTGGACAA---AGTTAGTA..................................................................................................................2430.33100000000100000000
................................................................................................................ACAA---AGTTAGTATTTAAAGTTAA-----------------------------------------------------------------------------GT---T....................2630.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTGAGTA...........................................................................................................................................2130.33100000000001000000
.............................................................................TAACATAG----CTTGGGGTGAGTTTGGGGT.....................................................................................................................................2730.33100000001000000000
dm3
CCGCATCCACGATT-TATTTTGCCTTTGATTACA-GTGTGTGCAATATATAGGTACAATTATTTAAATTTTAGAGTTGAACATTG----AGTGGGGTGAGTTTGGGGCTTGGACAT---AGTTAGTATTAATA-T-----------------------------------------------------------------------GTA------TT---AAGTATTTTTTATGTAAGCGTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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.................TTTTGCCTTTGATTACA-GTGTGTTT......................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TATATAGGTACAATTATTTAAATTTA..........................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TT-TATTTTGCCTTTGATTACA-GTG...........................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TACA-GTGTGTGCAATATATAGGTAC.........................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................TTTGCCTTTGATTACA-GTGTGTGTT.....................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....ATCCACGATT-TATTTTGCCTTT......................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCACGATT-TATTTTGCCTTTGATTACA-G.............................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCTTTGATTACA-GTGTGTGCAATATA................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCTTTGATTACA-GTGTGTGCAATA..................................................................................................................................................................................................24200.1020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCACGATT-TATTTTGCCTTTGATT..................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TATTTTGCCTTTGATTACA-GTG...........................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTTGATTACA-GTGTGTGCAATATAA...............................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TACA-GTGTGTGCAATATATAG.............................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000
...........................................................................................TGGGGTGAGTTTGGGGCTT...................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCCTTTGATTACA-GTGTGTGCAATATA................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TTGGACAT---AGTTAGTATTAATA-T-----------------------------------------------------------------------...................................23140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCGTTTCCACAATT-TAT-TTGCCTTTGATTACATAGATATGCAATATATAGGTACAAGAATTTACATTTTTGAGTTTAACATTG----TG-GAGGTGAGTTTTGGGAATGGACAATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGTATTTTCTTTG-------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...............TAT-TTGCCTTTGATTACATAGATA.........................................................................................................................................................................................................24111.641818000000
............................................................................................GAGGTGAGTTTTGGGAATGGACAA.............................................................................................................................2411.0010000100
....................................................................TTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................23200.901830000015
...................................................................TTTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................24200.851716000010
.............................................TATATAGGTACAAGAATTTACATTTT..........................................................................................................................................................................26200.801615100000
...........ATT-TAT-TTGCCTTTGATTACATAGA...........................................................................................................................................................................................................25120.5066000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTGAGT............................................................................................................................................25200.4599000000
...............................................................TACATTTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................28200.4088000000
...........ATT-TAT-TTGCCTTTGATTACATAGATA.........................................................................................................................................................................................................27110.3644000000
....................................................................................................................TAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTATA..............................24110.3644000000
...............TAT-TTGCCTTTGATTACATAGATATGCAA....................................................................................................................................................................................................29110.3644000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTGAGTT...........................................................................................................................................26200.3576000100
.............................................TATATAGGTACAAGAATTTACATTT...........................................................................................................................................................................25200.3577000000
......................................TATGCAATATATAGGTACAAGAATT..................................................................................................................................................................................25190.3266000000
.............................................................................TAACATTG----TG-GAGGTGAGTTTTGG.......................................................................................................................................24200.3066000000
.............................................................TTTACATTTTTGAGTTTAACATTG----TG-.....................................................................................................................................................26200.3066000000
.............................................................................................................................TA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGTA................26110.2732000100
.............................................TATATAGGTACAAGAATTTACATT............................................................................................................................................................................24200.2554001000
...............................................................TACATTTTTGAGTTTAACATTG----TG-GA...................................................................................................................................................26200.2550000005
......................................................................TTGAGTTTAACATTG----TG-GAGGTGAG.............................................................................................................................................25200.2555000000
............................................................................TTAACATTG----TG-GAGGTGAGTTTTG........................................................................................................................................24200.2555000000
............................................................................................................ATGGACAATAATGTTAGTA---AAAGG..........................................................................................................24160.2544000000
.............................................................................................................TGGACAATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------G..................................27170.2443100000
...............................................................TACATTTTTGAGTTTAACATTG----TG-.....................................................................................................................................................24200.2044000000
.............................................................................TAACATTG----TG-GAGGTGAGTTTTG........................................................................................................................................23200.2044000000
............................................................................................................ATGGACAATAATGTTAGTA---AAAGGT.........................................................................................................25160.1930000003
.............................................................................................................................TA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGT.................25110.1822000000
.............T-TAT-TTGCCTTTGATTACATAGATA.........................................................................................................................................................................................................25110.1822000000
...................TTGCCTTTGATTACATAGATATGCAA....................................................................................................................................................................................................26110.1822000000
...................TTGCCTTTGATTACATAGATATGCA.....................................................................................................................................................................................................25110.1822000000
....................................................................................................................TAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTATAC.............................25110.1822000000
...............TAT-TTGCCTTTGATTACATAGATATG.......................................................................................................................................................................................................26110.1822000000
.............................................................................................................................TA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGTAT...............27110.1821000100
....................TGCCTTTGATTACATAGATATGCAA....................................................................................................................................................................................................25110.1822000000
.............................................TATATAGGTACAAGAATTTACATTTTT.........................................................................................................................................................................27200.1533000000
......................................................................TTGAGTTTAACATTG----TG-GAGGTGAGT............................................................................................................................................26200.1533000000
............................................................................TTAACATTG----TG-GAGGTGAGTTTTGG.......................................................................................................................................25200.1533000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGTGA..............................................................................................................................................25200.1533000000
...........................................................................TTTAACATTG----TG-GAGGTGAGTTT..........................................................................................................................................23200.1533000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTGAG.............................................................................................................................................24200.1533000000
........................................TGCAATATATAGGTACAAGAATTTACA..............................................................................................................................................................................27200.1533000000
............................................................................TTAACATTG----TG-GAGGTGAGTT...........................................................................................................................................21200.1533000000
..................................................................................................................AATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTA................................24170.1222000000
........................................TGCAATATATAGGTACAAGAATTTACATT............................................................................................................................................................................29200.1022000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTG...............................................................................................................................................22200.1022000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGTGAGT............................................................................................................................................27200.1022000000
.............................................................................................................................TA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TAGTATT..............28100.1011000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTGAGTTT..........................................................................................................................................27200.1022000000
...........................................................................TTTAACATTG----TG-GAGGTGAGTTTTG........................................................................................................................................25200.1022000000
..............................................ATATAGGTACAAGAATTTACATTTT..........................................................................................................................................................................25200.1022000000
...........................................................................TTTAACATTG----TG-GAGGTGAGTTTTGG.......................................................................................................................................26200.1022000000
....TTCCACAATT-TAT-TTGCCTTTGAT...................................................................................................................................................................................................................24200.1022000000
.......CACAATT-TAT-TTGCCTTTGATTACA...............................................................................................................................................................................................................25200.1022000000
........................................................................GAGTTTAACATTG----TG-GAGGTGAGTT...........................................................................................................................................25200.1022000000
.......................................................................TGAGTTTAACATTG----TG-GAGGTGA..............................................................................................................................................23200.1022000000
......................................................................TTGAGTTTAACATTG----TG-GAGGTGA..............................................................................................................................................24200.1022000000
....................TGCCTTTGATTACATAGATATGCAATA..................................................................................................................................................................................................27110.0911000000
..................................TAGATATGCAATATATAGGTACAAGA.....................................................................................................................................................................................26110.0910000100
...............TAT-TTGCCTTTGATTACATAGATATGCT.....................................................................................................................................................................................................28110.0911000000
..........................TGATTACATAGATATGCAATATATAG.............................................................................................................................................................................................26110.0911000000
.............................................................................................................................TA---AAAGGTAA--------------------------------------------------------------------GTATACTAGGT---TA...................23110.0911000000
..............................TACATAGATATGCAATATATAGGTAC.........................................................................................................................................................................................26110.0911000000
...............TAT-TTGCCTTTGATTACATAGATATGC......................................................................................................................................................................................................27110.0911000000
...............TAT-TTGCCTTTGATTACATAGATATGCTC....................................................................................................................................................................................................29110.0911000000
...............TAT-TTGCCTTTGATTACATAGATATGCA.....................................................................................................................................................................................................28110.0911000000
........................TTTGATTACATAGATATGCAATAT.................................................................................................................................................................................................24110.0911000000
....................TGCCTTTGATTACATAGATA.........................................................................................................................................................................................................20110.0911000000
.................T-TTGCCTTTGATTACATAGATATGCAA....................................................................................................................................................................................................27110.0911000000
..............................TACATAGATATGCAATATATAGGTACAA.......................................................................................................................................................................................28110.0911000000
...................................AGATATGCAATATATAGGTACAAGAA....................................................................................................................................................................................26110.0911000000
........................TTTGATTACATAGATATGCAATA..................................................................................................................................................................................................23110.0911000000
....................................GATATGCAATATATAGGTACAAGAAT...................................................................................................................................................................................26110.0911000000
..........................TGATTACATAGATATGCAATATATAGG............................................................................................................................................................................................27110.0911000000
........................TTTGATTACATAGATATGCAATATA................................................................................................................................................................................................25110.0911000000
............TT-TAT-TTGCCTTTGATTACATAGATA.........................................................................................................................................................................................................26110.0911000000
.........................................................................................................................TTAGTA---AAAGGTAA--------------------------------------------------------------------GTATACTAGG.........................24110.0911000000
...............TAT-TTGCCTTTGATTACATAGATC.........................................................................................................................................................................................................24120.0811000000
............TT-TAT-TTGCCTTTGATTACATAGA...........................................................................................................................................................................................................24120.0811000000
...............TAT-TTGCCTTTGATTACATAGATACTT......................................................................................................................................................................................................27120.0811000000
.......................................................................................................................TGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTATA..............................21120.0811000000
...........ATT-TAT-TTGCCTTTGATTACATAGAT..........................................................................................................................................................................................................26120.0810000001
.............T-TAT-TTGCCTTTGATTACATAGA...........................................................................................................................................................................................................23120.0811000000
...........................................................................................................AATGGACAATAATGTTAGTA---AAAGG..........................................................................................................25160.0611000000
...........................................................................................................AATGGACAATAATGTTAGTA---AAAGGTA........................................................................................................27160.0611000000
................................................................................................................ACAATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTA................................26170.0611000000
..................................................................................................................AATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GTAA...............................25170.0611000000
..................................................................................................................AATAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------G..................................22170.0611000000
....................................................................................................................TAATGTTAGTA---AAAGGTAA--------------------------------------------------------------------GT.................................21170.0611000000
....................................GATATGCAATATATAGGTACATTT.....................................................................................................................................................................................24180.0611000000
......................................TATGCAATATATAGGTACAAGAAT...................................................................................................................................................................................24190.0511000000
......................................TATGCAATATATAGGTACAAGAATTT.................................................................................................................................................................................26190.0511000000
.............................................................TTTACATTTTTGAGTTTAACATTG----T.......................................................................................................................................................25200.0511000000
.CGTTTCCACAATT-TAT-TTGCCTT.......................................................................................................................................................................................................................23200.0511000000
...............................................................................ACATTG----TG-GAGGTGAGTTTTGG.......................................................................................................................................22200.0511000000
......................................................................TTGAGTTTAACATTG----TG-GAG..................................................................................................................................................20200.0511000000
..................................................AGGTACAAGAATTTACATTTTTGAGT.....................................................................................................................................................................26200.0511000000
...........................................AATATATAGGTACAAGAATTTACATT............................................................................................................................................................................26200.0511000000
.................................................TAGGTACAAGAATTTACATTTTTGAGA.....................................................................................................................................................................27200.0511000000
............................................................................TTAACATTG----TG-GAGGTGAGTTTT.........................................................................................................................................23200.0511000000
................................................................................CATTG----TG-GAGGTGAGTTTT.........................................................................................................................................19200.0511000000
........................................TGCAATATATAGGTACAAGAATTTAC...............................................................................................................................................................................26200.0510001000
...................................................................TTTTTGAGTTTAACATTG----TG-GAGGTG...............................................................................................................................................26200.0511000000
....TTCCACAATT-TAT-TTGCCTTTGATTACA...............................................................................................................................................................................................................28200.0511000000
.....TCCACAATT-TAT-TTGCCTTTGAT...................................................................................................................................................................................................................23200.0511000000
................................................................ACATTTTTGAGTTTAACATTG----TG-G....................................................................................................................................................24200.0511000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................22200.0511000000
.....TCCACAATT-TAT-TTGCCTTTGATTACA...............................................................................................................................................................................................................27200.0511000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGTG...............................................................................................................................................24200.0511000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGT................................................................................................................................................23200.0511000000
..............................................................TTACATTTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................29200.0511000000
...............................................TATAGGTACAAGAATTTACATTT...........................................................................................................................................................................23200.0511000000
...........................................................................TTTAACATTG----TG-GAGGTGAGTTTT.........................................................................................................................................24200.0511000000
.............................................TATATAGGTACAAGAATTTACAT.............................................................................................................................................................................23200.0511000000
..........................................................................GTTTAACATTG----TG-GAGGTGAGTTTA.........................................................................................................................................25200.0510000100
..........................................................................GTTTAACATTG----TG-GAGGTGAGTTTTG........................................................................................................................................26200.0511000000
.............................................................TTTACATTTTTGAGTTTAACATTG----TG-GA...................................................................................................................................................28200.0511000000
........................................................................GAGTTTAACATTG----TG-GAGGTGAG.............................................................................................................................................23200.0511000000
.............................................TATATAGGTACAAGAATTTACATTTA..........................................................................................................................................................................26200.0511000000
.........................................GCAATATATAGGTACAAGAATTTACAT.............................................................................................................................................................................27200.0511000000
.................................................................CATTTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................26200.0511000000
......................................................................TTGAGTTTAACATTG----TG-GAGGTGAGTT...........................................................................................................................................27200.0511000000
...........ATT-TAT-TTGCCTTTGATTACATAG............................................................................................................................................................................................................24200.0511000000
.................................................TAGGTACAAGAATTTACATTTTTGAGTT....................................................................................................................................................................28200.0511000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGTGAG.............................................................................................................................................26200.0511000000
.................................................TAGGTACAAGAATTTACATTTTTG........................................................................................................................................................................24200.0511000000
................................................................ACATTTTTGAGTTTAACATTG----TG-.....................................................................................................................................................23200.0511000000
...........................................................................TTTAACATTG----TG-GAGGTGA..............................................................................................................................................19200.0511000000
..............................................................TTACATTTTTGAGTTTAACATTG----T.......................................................................................................................................................24200.0511000000
.....................................................TACAAGAATTTACATTTTTGAGTTT...................................................................................................................................................................25200.0511000000
...............................................TATAGGTACAAGAATTTACATTTT..........................................................................................................................................................................24200.0511000000
......................................................................TTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................21200.0511000000
................................................................ACATTTTTGAGTTTAACATTG----TG-GAGG.................................................................................................................................................27200.0510000001
.CGTTTCCACAATT-TAT-TTGCCTTTG.....................................................................................................................................................................................................................25200.0511000000
...............................................................TACATTTTTGAGTTTAACATTG----TG-G....................................................................................................................................................25200.0511000000
...........................................................AATTTACATTTTTGAGTTTAACATTG----A.......................................................................................................................................................27200.0511000000
.....................................................................TTTGAGTTTAACATTG----TG-GAGGTGAGAAA..........................................................................................................................................29200.0511000000
...............................................TATAGGTACAAGAATTTACATT............................................................................................................................................................................22200.0511000000
...............................................TATAGGTACAAGAATTTACATTTTT.........................................................................................................................................................................25200.0511000000
........................................................................GAGTTTAACATTG----TG-GAGGTGAGTTT..........................................................................................................................................26200.0511000000
...........................................................................TTTAACATTG----TG-GAGGTGAGT............................................................................................................................................21200.0511000000
....................................................................TTTTGAGTTTAACATTG----TG-GAG..................................................................................................................................................22200.0511000000
...TTTCCACAATT-TAT-TTGCCTTTGAT...................................................................................................................................................................................................................25200.0511000000
droYak3
CAGAAG---------------------------------------------GACGGAAGCAACGAGTCGCTGGAGGCCTCAGGAGTCATCG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGGCC--CAATTTGTTGCAACCGCAAGATGCGCGCCACTAGCAACATTTGAATCGGGCCGGCGTTGCAGGTGAGTAGTATTCGTGGTG-------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
................................................................................................TGGA-ATTGG--------------------------------AGTTAATTTGGCC--CAATT...................................................................................27127.0027026010000000
..................................................................TCGCTGGAGGCCTCAGGAGTCATCG-CC...................................................................................................................................................27123.0023071600000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCACTAGC.....................................................27122.0022020110000000
..............................................................................................................................................................................TGCGCGCCACTAGCAACATTTGAATCGGG......................................29115.0015000000000015
......................................................................................................................................................................................ACTAGCAACATTTGAATCGGGCCGG..................................25114.0014000000000014
............................................................................................................................................................................................................CGGCGTTGCAGGTGAGTAGTATTCGTGG.........28114.0014000000000014
.................................................................................................................................................................................................TTGAATCGGGCCGGCGTTGCAGGT........................24213.5027000000000027
..................................................................TCGCTGGAGGCCTCAGGAGTCATCG-C....................................................................................................................................................26113.001307150000000
............................................................AACGAGTCGCTGGAGGCCTCAGGA.............................................................................................................................................................24111.001102100000008
...AAG---------------------------------------------GACGGAAGCAACGAGTCGCTGG........................................................................................................................................................................2517.00704300000000
.......................................................GAAGCAACGAGTCGCTGGAGGCCTCA................................................................................................................................................................2616.00606000000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCACTAG......................................................2616.00606000000000
.....................................................CGGAAGCAACGAGTCGCTGGAGGCC...................................................................................................................................................................2516.00602400000000
................................................................................................TGGA-ATTGG--------------------------------AGTTAATTTGGCC--CAAT....................................................................................2615.00504100000000
.......................................................GAAGCAACGAGTCGCTGGAGGCCT..................................................................................................................................................................2415.00502300000000
..................................................................................................................................................................................................TGAATCGGGCCGGCGTTGCAGGTGAGA....................2725.0010000000000010
...................................................................CGCTGGAGGCCTCAGGAGTCATCG-CC...................................................................................................................................................2615.00501400000000
..GAAG---------------------------------------------GACGGAAGCAACGAGTCGCT..........................................................................................................................................................................2415.00501400000000
.......................................................GAAGCAACGAGTCGCTGGAGGCC...................................................................................................................................................................2315.00501400000000
............................................................................................................................................................TTTGTTGCAACCGCAAGATGCGCGCC...........................................................2614.00400400000000
..................................................................TCGCTGGAGGCCTCAGGAGTCATC.......................................................................................................................................................2414.00401210000000
......................................................GGAAGCAACGAGTCGCTGGAGGCCT..................................................................................................................................................................2514.00401300000000
.......................................................................................................TGG--------------------------------AGTTAATTTGGCC--CAATTTGTTGCA............................................................................2814.00404000000000
...................................................GACGGAAGCAACGAGTCGCTGGAGG.....................................................................................................................................................................2514.00403100000000
.....................................................................................TCATCG-CCGGTGGA-ATTGG--------------------------------AGTTAAT................................................................................................2614.00402200000000
........................................................................................................................................................................................TAGCAACATTTGAATCGGGCCGGC.................................2414.00401300000000
..............................................................................TCAGGAGTCATCG-CCGGTGGA-ATTGG--------------------------------.......................................................................................................2614.00404000000000
.......................................................GAAGCAACGAGTCGCTGGAGGCCTC.................................................................................................................................................................2513.00302100000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCACT........................................................2413.00303000000000
.......................................................GAAGCAACGAGTCGCTGGAGGC....................................................................................................................................................................2213.00300300000000
...AAG---------------------------------------------GACGGAAGCAACGAGTCGCTGGA.......................................................................................................................................................................2613.00303000000000
......................................................................TGGAGGCCTCAGGAGTCATCG-CCGG.................................................................................................................................................2513.00302010000000
................................................................................................TGGA-ATTGG--------------------------------AGTTAATTTGGCC--CAA.....................................................................................2513.00303000000000
............................................................................................................................................................TTTGTTGCAACCGCAAGATGCGCGC............................................................2513.00301110000000
CAGAAG---------------------------------------------GACGGAAGCAACGAGTCGCT..........................................................................................................................................................................2613.00301200000000
.....................................................................................TCATCG-CCGGTGGA-ATTGG--------------------------------AGTTAATT...............................................................................................2713.00303000000000
............................................................................................................................................................TTTGTTGCAACCGCAAGATGCGCGCCAC.........................................................2812.00202000000000
.............................................................................................................................................................TTGTTGCAACCGCAAGATGCGCGCC...........................................................2512.00201100000000
...................................................................................................................................................................................GCCACTAGCAACATTTGAATCGGGC.....................................2512.00201000010000
.............................................................................................................................................TAATTTGGCC--CAATTTGTTGCAACCG........................................................................2612.00201100000000
.................................................................................................................................................TTGGCC--CAATTTGTTGCAACCGCAAGA...................................................................2712.00201100000000
.........................................................AGCAACGAGTCGCTGGAGGCCTCAG...............................................................................................................................................................2512.00202000000000
.......................................................GAAGCAACGAGTCGCTGGAGGCCC..................................................................................................................................................................2412.00200200000000
............................................................AACGAGTCGCTGGAGGCCTCAGG..............................................................................................................................................................2312.00200200000000
......................................................................................CATCG-CCGGTGGA-ATTGG--------------------------------AGTTAATT...............................................................................................2612.00202000000000
............................................................................................................................................................TTTGTTGCAACCGCAAGATGCGCGCCA..........................................................2712.00201100000000
..........................................................GCAACGAGTCGCTGGAGGCCTCAGG..............................................................................................................................................................2512.00202000000000
............................................................................................CCGGTGGA-ATTGG--------------------------------AGTTAATTTGGCC--........................................................................................2612.00201100000000
............................................................AACGAGTCGCTGGAGGCCTCAGGAG............................................................................................................................................................2512.00202000000000
..............................................................................................................................................................TGTTGCAACCGCAAGATGCGCGCCAC.........................................................2612.00202000000000
.........................................................AGCAACGAGTCGCTGGAGGCCTCAGG..............................................................................................................................................................2612.00201100000000
..................................................................................................................................................................................CGCCACTAGCAACATTTGAATCGGGCC....................................2712.00201100000000
...AAG---------------------------------------------GACGGAAGCAACGAGTCGCTG.........................................................................................................................................................................2412.00202000000000
................................................................................................................................................................................CGCGCCACTAGCAACATTTGAATCGGGC.....................................2812.00202000000000
....................................................................GCTGGAGGCCTCAGGAGTCATCG-CC...................................................................................................................................................2512.00201100000000
..................................................................TCGCTGGAGGCCTCAGGAGTCATCG-.....................................................................................................................................................2512.00202000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGCAGG.........................2422.00400220000000
....AG---------------------------------------------GACGGAAGCAACGAGTCGCTGGAGG.....................................................................................................................................................................2712.00200200000000
.....................................................CGGAAGCAACGAGTCGCTGGAGG.....................................................................................................................................................................2312.00201100000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCAC.........................................................2312.00202000000000
.....G---------------------------------------------GACGGAAGCAACGAGTCGCTGGA.......................................................................................................................................................................2412.00200200000000
....AG---------------------------------------------GACGGAAGCAACGAGTCGCTGG........................................................................................................................................................................2412.00200200000000
..................................................................................................................................................................................CGCCACTAGCAACATTTGAATCGGGC.....................................2612.00201100000000
........................................................................................................GG--------------------------------AGTTAATTTGGCC--CAATTTGTTGCA............................................................................2711.00101000000000
......................................................GGAAGCAACGAGTCGCTGGAGGCC...................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................AAGATGCGCGCCACTAGCAACATTTGA............................................2711.00101000000000
......................................................GGAAGCAACGAGTCGCTGGAGGCCTC.................................................................................................................................................................2611.00100100000000
..GAAG---------------------------------------------GACGGAAGCAACGAGTCGCTG.........................................................................................................................................................................2511.00101000000000
.......................................................................GGAGGCCTCAGGAGTCATCG-CC...................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................TAGCAACATTTGAATCGGGCCGGCG................................2511.00101000000000
................................................................................................TGGA-ATTGG--------------------------------AGTTAATTTGG............................................................................................2011.00101000000000
.....................................................CGGAAGCAACGAGTCGCTGGAGGCCT..................................................................................................................................................................2611.00100100000000
.....................................................CGGAAGCAACGAGTCGCTGGAGGCCTC.................................................................................................................................................................2711.00100100000000
........................................................................GAGGCCTCAGGAGTCATCG-CCGGTGG..............................................................................................................................................2611.00101000000000
.......................................................................GGAGGCCTCAGGAGTCATCG-CCGG.................................................................................................................................................2411.00101000000000
.......................................................GAAGCAACGAGTCGCTGGAGG.....................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................CACTAGCAACATTTGAATCGGGCC....................................2411.00101000000000
..............................................................................TCAGGAGTCATCG-CCGGTGGA-ATT.........................................................................................................................................2411.00100100000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCC...........................................................2111.00101000000000
..............................................................................................................................................................TGTTGCAACCGCAAGATGCGCGCCACT........................................................2711.00101000000000
............................................................................................................................................TTAATTTGGCC--CAATTTGTTGCAACCGC.......................................................................2811.00101000000000
..................................................................................................................................................................................................................TGCAGGTGAGTAGTATTCGTGGT........2311.00100010000000
........................................................................................................................................................................................TAGCAACATTTGAATCGGGCC....................................2111.00100100000000
............................................................................CCTCAGGAGTCATCG-CCGGTGG..............................................................................................................................................2211.00101000000000
...................................................................................................................................................................CAACCGCAAGATGCGCGCCACTAGC.....................................................2511.00101000000000
.......................................................................................................................................................................CGCAAGATGCGCGCCACTAGCAACATT...............................................2711.00101000000000
...........................................................................................................................................................................AGATGCGCGCCACTAGCAACATTTGA............................................2611.00101000000000
........................................................................GAGGCCTCAGGAGTCATCG-CCGGTG...............................................................................................................................................2511.00101000000000
CAGAAG---------------------------------------------GACGGAAGCAACGAGTCGCC..........................................................................................................................................................................2611.00100100000000
.....G---------------------------------------------GACGGAAGCAACGAGTCGCTGGAGG.....................................................................................................................................................................2611.00100100000000
........................................................................................TCG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGGC...........................................................................................2811.00100100000000
..................................................................................................................................................................GCAACCGCAAGATGCGCGCCACTAG......................................................2511.00101000000000
......................................................................TGGAGGCCTCAGGAGTCATCG-CCGGT................................................................................................................................................2611.00101000000000
.........................................................AGCAACGAGTCGCTGGAGGCCTCAGGA.............................................................................................................................................................2711.00101000000000
............................................................................................................................................................TTTGTTGCAACCGCAAGATGCGCGT............................................................2511.00101000000000
...............................................................................................................................................................GTTGCAACCGCAAGATGCGCGCCACT........................................................2611.00101000000000
.............................................................................................................................................TAATTTGGCC--CAATTTGTTGCAACC.........................................................................2511.00100100000000
..............................................................................................................................................................................TGCGCGCCACTAGCAACATTTGAA...........................................2411.00101000000000
...........................................................CAACGAGTCGCTGGAGGCCTCAGG..............................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................AGCAACATTTGAATCGGGCCGGCGT...............................2511.00101000000000
.......................................................................................................................................................................................CTAGCAACATTTGAATCGGGCCGGCGT...............................2711.00100010000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCACTA.......................................................2511.00100100000000
.................................................................................GGAGTCATCG-CCGGTGGA-ATTGG--------------------------------.......................................................................................................2311.00100100000000
.....................................................................................................................................................................ACCGCAAGATGCGCGCCACTAGCAACATT...............................................2911.00101000000000
................................................................................................................................................................................CGCGCCACTAGCAACATTTGAATCGGG......................................2711.00101000000000
......................................................................................................................................................................CCGCAAGATGCGCGCCACTAGCAACA.................................................2611.00101000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGCAGGTG.......................2621.00202000000000
.......................................................GAAGCAACGAGTCGCTGGAGGCCTCAG...............................................................................................................................................................2711.00101000000000
.............................................................................................................................................................TTGTTGCAACCGCAAGATGCGCGC............................................................2411.00100001000000
........................................................AAGCAACGAGTCGCTGGAGGCCT..................................................................................................................................................................2311.00100100000000
.............................................................................................................................................TAATTTGGCC--CAATTTGTTGCA............................................................................2211.00101000000000
........................................................................GAGGCCTCAGGAGTCATCG-C....................................................................................................................................................2011.00101000000000
......................................................GGAAGCAACGAGTCGCTGGAGGCCC..................................................................................................................................................................2511.00100100000000
..............................................................................................................................................................TGTTGCAACCGCAAGATGCGCGCC...........................................................2411.00101000000000
.............................................................................CTCAGGAGTCATCG-CCGGTG...............................................................................................................................................2011.00101000000000
..........................................................................................G-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGG............................................................................................2511.00101000000000
.....................................................................................................................................................................................CACTAGCAACATTTGAATCGGGCCGG..................................2611.00101000000000
.......................................................................GGAGGCCTCAGGAGTCATCG-CCGGTGG..............................................................................................................................................2711.00100100000000
..................................................................................................................................................TGGCC--CAATTTGTTGCAACCGCAAGA...................................................................2611.00100100000000
.....................................................CGGAAGCAACGAGTCGCTGGAGGC....................................................................................................................................................................2411.00100100000000
..........................................................................GGCCTCAGGAGTCATCG-CCGGTGGA-A...........................................................................................................................................2611.00100100000000
........................................................................................................................................................................................TAGCAACATTTGAATCGGGCCG...................................2211.00101000000000
...............................................................................CAGGAGTCATCG-CCGGTGGA-ATTGG--------------------------------A......................................................................................................2611.00101000000000
............................................................................CCTCAGGAGTCATCG-CCGGTG...............................................................................................................................................2111.00100010000000
....................................................................................................................................................GCC--CAATTTGTTGCAACCGCAAGATG.................................................................2611.00101000000000
..............................................................................................GGTGGA-ATTGG--------------------------------AGTTAATTTGGCC--C.......................................................................................2511.00101000000000
....................................................................................................................................................................AACCGCAAGATGCGCGCCACTAGCAACA.................................................2811.00101000000000
.............................................................................................................................................TAATTTGGCC--CAATTTGTTGCAACCGC.......................................................................2711.00101000000000
.....................................................................................................................................................................................CACTAGCAACATTTGAATCGGGCCGGC.................................2711.00101000000000
.....................................................................CTGGAGGCCTCAGGAGTCATCG-CCG..................................................................................................................................................2511.00101000000000
..........................................................GCAACGAGTCGCTGGAGGCCTCAGGAG............................................................................................................................................................2711.00101000000000
.........................................................................................CG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTG.............................................................................................2511.00100100000000
...................................................................CGCTGGAGGCCTCAGGAGTCA.........................................................................................................................................................2111.00101000000000
.........................................................................................CG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGGC...........................................................................................2711.00101000000000
.......................................................................................................TGG--------------------------------AGTTAATTTGGCC--CAATTTGTTG..............................................................................2611.00101000000000
........................................................AAGCAACGAGTCGCTGGAGGCCTCAG...............................................................................................................................................................2611.00101000000000
..............................................................................................................................................................................................CATTTGAATCGGGCCGGCGTTGCAGG.........................2621.00201100000000
.............................................................................................................................................................TTGTTGCAACCGCAAGATGCGCGCCAC.........................................................2711.00101000000000
................................................................................................................................................TTTGGCC--CAATTTGTTGCAACCGCA......................................................................2511.00101000000000
...AAG---------------------------------------------GACGGAAGCAACGAG...............................................................................................................................................................................1811.00101000000000
.................................................................................................GGA-ATTGG--------------------------------AGTTAATTTGGCC--CAATT...................................................................................2611.00101000000000
..................................................................................................................................................................GCAACCGCAAGATGCGCGCCACT........................................................2311.00101000000000
...............................................................................................................................................................................GCGCGCCACTAGCAACATTTGAATCGG.......................................2711.00101000000000
........................................................................................TCG-CCGGTGGA-ATTGG--------------------------------AGTTAATTTGG............................................................................................2711.00101000000000
.AGAAG---------------------------------------------GACGGAAGCAACGAGTCGC...........................................................................................................................................................................2411.00100100000000
..GAAG---------------------------------------------GACGGAAGCAACGAGTCGCTGGA.......................................................................................................................................................................2711.00100100000000
..............................................................CGAGTCGCTGGAGGCCTCAGGAGT...........................................................................................................................................................2411.00101000000000
...............................................................GAGTCGCTGGAGGCCTCAGGAGTC..........................................................................................................................................................2411.00101000000000
....................................................ACGGAAGCAACGAGTCGCTGGAGGCC...................................................................................................................................................................2611.00100100000000
...................................................................CGCTGGAGGCCTCAGGAGTCATCG-.....................................................................................................................................................2411.00101000000000
............................................................AACGAGTCGCTGGAGGCCTCAGGAGT...........................................................................................................................................................2611.00100100000000
......................................................................................CATCG-CCGGTGGA-ATTGG--------------------------------AGTTAAT................................................................................................2511.00101000000000
..................................................................TCGCTGGAGGCCTCAGGAGTCATCG-CCG..................................................................................................................................................2811.00101000000000
...............................................................................................GTGGA-ATTGG--------------------------------AGTTAATTTGGCC--CA......................................................................................2511.00100000010000
................................................................................................................................................................TTGCAACCGCAAGATGCGCGCCACTAGC.....................................................2811.00101000000000
........................................................................................TCG-CCGGTGGA-ATTGG--------------------------------AGTTAATT...............................................................................................2411.00101000000000
..............................................................CGAGTCGCTGGAGGCCTCAGGAGTC..........................................................................................................................................................2511.00100100000000
........................................................................GAGGCCTCAGGAGTCATCG-CCGG.................................................................................................................................................2311.00101000000000
...................................................................CGCTGGAGGCCTCAGGAGTCATCG-C....................................................................................................................................................2511.00101000000000
...............................................................................CAGGAGTCATCG-CCGGTGGA-ATTGG--------------------------------.......................................................................................................2511.00100000010000
................................................................................................TGGA-ATTGG--------------------------------AGTTAATTTGGCC--C.......................................................................................2311.00101000000000
................................................................................................................................................................TTGCAACCGCAAGATGCGCGCCACTAG......................................................2711.00101000000000
.................................................................................................................................................................TGCAACCGCAAGATGCGCGCCACTAGCA....................................................2811.00101000000000
............................................................................................................................................................................................AACATTTGAATCGGGCCGGCGTTGCAGG.........................2820.50100100000000
..................................................................................................................................................................................................TGAATCGGGCCGGCGTTGCA...........................2020.50101000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTG.............................2020.50101000000000
......................................................................................................................................................................................................TCGGGCCGGCGTTGCAGGT........................1920.50101000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGC............................2120.50101000000000
...................................................................................................................................................................................................GAATCGGGCCGGCGTTGCAGG.........................2120.50100100000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGCAGGT........................2520.50101000000000
..................................................................................................................................................................................................TGAATCGGGCCGGCGTTGCAGG.........................2220.50100010000000
...........................................................................................................................................................................................CAACATTTGAATCGGGCCGGCGTTG.............................2520.50101000000000
..................................................................................................................................................................................................TGAATCGGGCCGGCGTTGCAG..........................2120.50100100000000
.............................................................................................................................................................................................ACATTTGAATCGGGCCGGCGTTG.............................2320.50101000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGCA...........................2220.50101000000000
..................................................................................................................................................................................................TGAATCGGGCCGGCGTTGCAGGTG.......................2420.50101000000000
................................................................................................................................................................................................TTTGAATCGGGCCGGCGTTGCAG..........................2320.50100010000000
...............................................................................................................................................................................................ATTTGAATCGGGCCGGCGTTGCAGG.........................2520.50101000000000
..............................................................................................................................................................................................CATTTGAATCGGGCCGGCGTTGCA...........................2420.50101000000000
............................................................................................................................................................................................AACATTTGAATCGGGCCGGCGTT..............................2320.50100100000000

Generated: 05/15/2015 at 02:35 PM