ID:

dse_1134

 Coordinate:

scaffold_28:291670-291820 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -18.9 -18.5

Flybase annnotation

CDS [Dsec\GM16129-cds]; exon [dsec_GLEANR_16980:4]; intron [Dsec\GM16129-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
DNAREP1_DMRCHelitron+
mature
  1. scaffold_1510:167-187 -
  2. scaffold_229:15649-15669 -
  3. scaffold_229:16372-16392 -
  4. scaffold_229:17501-17521 -
  5. scaffold_26:55040-55060 -
  6. scaffold_26:486345-486365 -
  7. scaffold_18:1317961-1317981 -
  8. scaffold_19:709375-709395 -
  9. scaffold_29:186328-186348 -
  10. scaffold_28:231022-231042 -
  11. dse_1134  scaffold_28:291750-291770 -
  12. scaffold_28:761687-761707 -
  13. scaffold_30:608502-608522 -
  14. scaffold_40:196961-196981 -
  15. scaffold_12255:725-745 -
  16. scaffold_46:279286-279306 -
  17. scaffold_61:166199-166219 -
  18. scaffold_148:18261-18281 -
  19. scaffold_184:27833-27853 -
  20. scaffold_281:11583-11603 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTAGATCTTAGGAAGTTAAAAAATTGGAAATCGAGTTGCCCGACTATCAGATACCCGTTACTCAGCAACTAGGAATGCGAACGCGAAATTTCATAATTTTTCTGGGATATCGATAGATATTTCGACGTTCATATGGACAGACGGACATGGTTACTTAACTTATATTTTAATATTTTTACAATTTTGTCTTACTTTTTTAGGCATTGAGTATCTCGTTGAAAACAGGCTGCTACGTCATGATCCCCAGGAC
**************************************************.....(((((..((.(((........)))(((((.((((((....))))))..(((((((((....))))))))).))))).....))..)))))........................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114
embryo
 V113
male body		 M054
female body
.............................................................................................................................................................................................................................AACAGGCTGCTACGTCATGATCCC...... 24 0 1 1.00 1 0 1 0
...........................................................................................................................................................................................................................AAAACAGGCTGCTACGTC.............. 18 0 1 1.00 1 1 0 0
...............................................................................................................................GTTCATCTCGACAGCCGGAC........................................................................................................ 20 3 14 0.14 2 0 0 2
..................................AGTTGCCCGACTATCAGATACC................................................................................................................................................................................................... 22 0 9 0.11 1 0 0 1
..................................................................................................................................................................................................................................GCTGCTAGGTCACCATCCC...... 19 3 10 0.10 1 0 0 1
..................................................................................................................................................................................................................................GCTGCAACGTGGTGATCCCC..... 20 3 13 0.08 1 0 0 1
...............................................................................................................................GTTCATCTTGACAGCCGGAC........................................................................................................ 20 3 18 0.06 1 0 0 1
....................................................................................................TTCTGGGATATCGATAGATAT.................................................................................................................................. 21 0 20 0.05 1 1 0 0

Anti-sense strand reads

AGATCTAGAATCCTTCAATTTTTTAACCTTTAGCTCAACGGGCTGATAGTCTATGGGCAATGAGTCGTTGATCCTTACGCTTGCGCTTTAAAGTATTAAAAAGACCCTATAGCTATCTATAAAGCTGCAAGTATACCTGTCTGCCTGTACCAATGAATTGAATATAAAATTATAAAAATGTTAAAACAGAATGAAAAAATCCGTAACTCATAGAGCAACTTTTGTCCGACGATGCAGTACTAGGGGTCCTG
**************************************************.....(((((..((.(((........)))(((((.((((((....))))))..(((((((((....))))))))).))))).....))..)))))........................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054
female body
 V113
male body		 V114
embryo
 V115
head
...................................................................................................................................................TACCAATGACTTGAGTAAAAA................................................................................... 21 3 3 0.33 1 0 1 0 0
................................................................................TTGCGCTTTAAAGTATTAAAAAGACCCT............................................................................................................................................... 28 0 20 0.10 2 2 0 0 0
..................................................CTATGGGCAATGAGTCGT....................................................................................................................................................................................... 18 0 10 0.10 1 1 0 0 0
.............................TTAGCTCAACGGGTTGGTAGTCT....................................................................................................................................................................................................... 23 2 17 0.06 1 0 0 0 1
..........................................................................................................................................................................................................GTGGCTCATAGAGCAACTC.............................. 19 3 20 0.05 1 1 0 0 0
.................................................................................TGCGCTTTAAAGTATTAAAAAGACCCT............................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
................................................................................TTGCGCTTTAAAGTATTA......................................................................................................................................................... 18 0 20 0.05 1 0 0 1 0
..................................................................................GCGCTTTAAAGTATTAAAAAGACCCT............................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
.......................................GGGCTGATAGTCTATGGGCAAT.............................................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0
..........................................................................TTACGCTTGCGCTTTAAAGTATTAAAA...................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSec2 scaffold_28:291620-291870 - dse_1134 TCTAGATCTTAGGAAGT----TAAAAA--ATTGGA---------------------AATCGAGTTGCCCGACTATCAGATACCCGTTACTCAGCAAC---------------------TAGGAATGCGAACGCGAAATTTCATAATTTTTC------------------------------------------------------TGGGATATCGA-----TAGATATTTCGACGTTCATATGGACAGACG-----------------------------------------------------------------------------------------------------------------------------------GACATG---GTTACTTAACTTATAT--------------------------------------------------------------------------------------------------------TTT-----------------------------A----A----------------TA-------------------------------------------------T-------------------------TTTTACAATT-TTGTCTTACTTTTTTAGGCATTGA-GTATCTCGTTGAAAACAGGCTGCTACGTCATGATCCCCAGGAC
droSim2 x:18147444-18147670 + TCTGTTCTT-GAGAAGGTAGA------AGG--------------TAGAGAAGGTATAGTCGAGTTCCCCGACTATCAGATACCCGTTACTCGGCTAG---------------------TGGAAATGCGAACTCGAAATTTTATCCTTTTTC------------------------------------------------------TGGGATATCGA-----TAGACATTGGG---------------------------------------------------------------------------------------------------------GAATAAA----TGAGA---------------A------------ATGAG----------------AAAATATTTAAATATTATTA---------------------------------------------------------------------------------------------------------TATATGTATTAATTATATTGAATATTTATTATAT---------------------------------------------------------------------------------------------------------TTA------------------------------TTTGTTTGATTATCCCA-ATGA
dm3 chr3R:2428085-2428293 + AAATATTTT-GAATTAAAAAA------AAG--------------AGAGAATGTTATAGTCGAGTTCCCCGACTATCTAATACCCGTTACTCAGCTGC---------------------TGGCAGTGAGAACGTGATATTTCATAATT-TTC------------------------------------------------------TGGCATATCGA-----TAGATATTGGA---------------------------------------------------------------------------------------------------------GAATTTA----ATGGG---------------A------------AGGCG------------------------------------------------------------------------TGGCTGCATGGATGAACAAACTTGTGC--------------------------TTT-----------------------------A----G----------------AA-------------------------------------------------T-------------------------C--TGTATGCTTTATCTTAACC---------------------------------------------------TTATAG
droEre2 scaffold_4820:9742497-9742678 - AGTC--------------------------------------------------------GAGTTTCCCGACTATCAGATACCCGTTACTCAGCTAG---------------------TGGAAGTGCAAACGAGAAATTTCAACATTTT-------------------------------------------------------------------------------------------------------------------TAAT------------TTTTTTGAATTTCT-------------------------------------------ACACATA----ATACA---------------T------------CAGAAAA---ATTAC------AAAAAAATTACATTTTA---------------------------------------------------------------------------------------------------------------------------------A----------------AA-------------------------------------------------ATTTT-CTAAATT-TGAATGCAGTTTT-----------------------TTAGAGAA--------------------------TTGCGCCAGA-------AACA
droYak3 2L:18138002-18138210 - AGTC--------------------------------------------------------GAGTTCCCCGACTATCAGATACCTGTTACTCAGCTAG---------------------AGGCAGTGCCTAATC--------TTAACT-TTCTAGCTTTAATAGTTCCTGAATTCTCGACGGTCAGCCAGACGGACATGGCCAGTTCAACTCGGCTA-----TTGATCCTGAT---------------------------------------------------------------------------------------------------------AAAGA---------------------------------------------------------------------------------------------------------------------------------------------------TTTGAGT-TTATTTT----------TATGGGCGTGTAATAGATCTAGGAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------AACTGGTTGTTCCGC---------CCAGTT
droEug1 scf7180000407331:44491-44660 - AATC--------------------------------------------------------GAGTACTTCGACTATAAGATACCCGTCATTCATGTAAGAAATACGAAAATGAATCAGTTGC---------CATAATATTACGC------------------------------------------------------------------------------AATATATTAGGTCGTCAAAAAAGTCTTGCG-----------------------------------------------------------------------------------------------------------------------------------GTATTT---TCTTTTTAGTTTTAAT--------------------------------------------------------------------------------------------------------TTT-----------------------------A----T----------------TT-------------------------------------------------A-------------------------ATTTTTAATT-TTTTT--------TTAAATTTTCAATT--------------------------------------ATT
droBia1 scf7180000301634:32486-32635 + CTAAGATCTCGAAAACT----AAAAGA--GTTAGAGCAGTCGGACTTGGCATGCA------GGTTCCTGGGCTACCTA------------------------------------------CGCACGCCCACTCGAACGCCCACAATTTGC------------------------------------------------------------------GAAAA------------------------------TCTGTAGCGTCTTCAAT------------TTTTATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACGTAATATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------AA---------------------CTGAAAT
droTak1 scf7180000413176:24953-25245 - GATTTTT---GACAATAAAAG------AAG--------------AGAGAACGCTATAGTCGGGTGCCCCGACTATCAGCTACCCGTTACTCATCTAA---------------------AGGGAGTGCGAAGGAGA------TGGGGA-TAAAAACTTTGATCCGCCGTAACTTTTTAACGAATGGACCGATTTAAAAAATTTCTTCTACATTTCGA-----TAGGTATTGAT---------------------------------------------------------------------------------------------------------AAACACA----ATAAA---------------A------------CTGCATT---TTTACTTTTCCGAAATATTGAAATTTTTAAAATCGTATATTAGCGATTGTGGGCGTTA----------------GTTTTCAAACAAACTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCGTAG-GAACTCCTAGAA
droEle1 scf7180000491277:31203-31407 - TTGAGATCTCTGAAACT----ATAAAG--G------------GATTTAAAATGTA------GATTCTAGTT-----ATACAAACATTGTTCGGCAAA---------------------TGGCGTCTCCAA----AAACCCTATAATTTTCA------------------------------------------------------GGGGACAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTATTAT-----------------------------------------------------------------TTTGAAATTGGTTAGTTGAGTAACGGGTATCTAATAGTCGCGTCACTCAACTTTT-CTTCATT-TATGTATATTTAT-----------------------TTATGTGTT---TT--------------------------------------ATT
droRho1 scf7180000779410:200907-201208 - TAAATATTA--AC--------------AAG--------------AGAAAACGCTATAGTCGGGTGACCCGACTATCAGATACCCGTTACTCAGGTAA---------------------AGGGAGTGCGAGGGAGA------TGGAGA-TAGAAACTTTGATCACGCATAACTTTTTAACGAATGGTCCGATTTGAAAAATTTCTTCTACATTTCGA-----TAGGTATTGAT---------------------------------------------------------------------------------------------------------AAACACA----ATAAA---------------A------------CTGCATT---TTTACTTTTCCGAAATATTTAAATTTTTAAAATCTTATATAAGCGATTGTGGGCGTTAAAGGGGGCGTGGCACCATTTTGAAACAAACTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCGTAAGAACTC-CTAGAA
droFic1 scf7180000453973:513269-513331 + CTTTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGCATTGA-ATATCTCGTAGAGAACAGACTGCTTCGTCACGATCCCCAGGAT
droKik1 scf7180000298176:6993-7212 + TAGAAATGCTCAATAAAATT-GTAGAA--A------------TAATT--AAATTATAACTTAGCTGTTTGACAA---------------------------------------------------------------------------------------------------------------------------------------------------TATATGTTCAT-CATTATTGAGACATGGCAATTTTTTATTTCAGATT------------TTTAATTTTA--------TGAAA---ATCGGACGACTATATCTTTTAGCTGCCATAG---------------GAACGATCGG---AA-T-------------------------------------------------------------------------------------------------------------------------------ATTAATTTTAACAACTTC-----------------------------A----ATATTTG------------------------------------------------------------------------------------------TTGATTT-TTAACTTATTTTCATCTAC-------------------------------------------TCTGAG
droAna3 scaffold_12916:9337965-9338032 - TTTATTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTCCAGGCATTGA-GTATCTCGTGGAGAACAGACTGCTGCGTCACGATCCCCAGGAT
droBip1 scf7180000396535:1908576-1908655 - TACATTTCT-------------------------------------------------------TTCTTTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTCCAGGCATTGA-GTATCTCGTGGAGAACCGACTGCTGCGTCACGATCCCCAGGAT
dp5 4_group1:1085886-1085968 - TCTAATAT--------------------------------------------------------------------------TCCTTACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCCCTTTTCCAGGCATTGA-GTATCTCGTGGAGAACCGACTGCTGCGTCACGATCCCCAGGAT
droPer2 scaffold_9:2056819-2057056 - TTTGACGCCTAGAGACT----ATAGGA--GCTAGAGCAACCAAATTTTCCATCCA------GACTCCTGTGATGT-----C-GCACTGTT-----A----------------------------CAAGGAC-------------------------------------------------------------------------------------GGAAA------------------------------TCTGTGGAATCCACAGT------------TTTGAAGATACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GAATCATAGAGACAGACAGACATGGATTAGATCTGATTATTATTTT----------TATAGCCAGA-------------------A----GG---------------------------------AAAAAATGA--------------------------------------------------ATTTGCAATG-GCCACTCTCTTACTTAGAGACTGA-GTATC--------------------------------------
droWil2 scf2_1100000004620:256555-256751 + TCCGTCTGTCGGAGAAT----ATAAGA--GCTAGATCCACCAAT--TGGTATATA------GA------------------CTCTTTTCTTAAAAAC---------------------TATGAA--------------------AGCTACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATTAA------ATTGTTCTTAC-----------------------------------------------------------------TTTC--ATTCGTTTTTTGTTTAATATACATATATATGTCGGGGCGCTAAGATTTTTGTTTGTTCCACTCATGTTTCTTTTGCAGTTTTCACTTTAGA---------------CT--------------------------------------TTT
droVir3 scaffold_9398:501-756 + CCTCAGTTTTAAAGC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGAACTCACTTCTTTCTGTTGCACGCAGCACATATGTGAAAACCAGCTGGATCGGACCACTATATCATATAGCTGCCATAG---------------GAACAATCGGTCGAAAATTAGGTTTTTGTATGAA----------------AAAACATTTTGT--TTATCA---------------------------------------------A----------------------------GATATCTTGACCAAACTC-----------------------------G----GCATTTTTTAGTTTTACTTTAC------------------------------------------------------------------------------------------TC-CTCATATATGTTCA-AAATCCTATTAAAATCGGAGCGCTATATCAT------------
droMoj3 scaffold_6414:14357-14531 + AAAAAATCTCAGAAGAT----ATAAGA--GCTAGAG-AGCTGAA--TGGCATGCA------TACTCGTATATA--------------------CCAT---------------------AGGCAGTACGAGTTTGC------TTTATTTTTT------------------------------------------------------CGATAACTCAT-----CCGATAAC----------------------------------------------------------------------------------------------------------------TTTTTTAACGAGAATAATCGA---AA-A------------ATCGA-CTTTGTTTTTTCAGCCTAAT--------------------------------------------------------------------------------------------------------TTG-----------------------------A----A----------------CA-------------------------------------------------C-------------------------TT---------------------------------------------------------------------TTAGACTT
droGri2 scaffold_15252:8221675-8221758 + TATTTTT-----------------------------------------ACATAT------------------------------------------------------------------------------------------------------------------------------------------------ATATATTCTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CTTGCAGGCATTGA-GTATCTCGTGGAGAATCGACTGTTACGTCACGATCCGCAGGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TCTAGATCTTAGGAAGT----TAAAAA--ATTGGA---------------------AATCGAGTTGCCCGACTATCAGATACCCGTTACTCAGCAAC---------------------TAGGAATGCGAACGCGAAATTTCATAATTTTTC------------------------------------------------------TGGGATATCGA-----TAGATATTTCGACGTTCATATGGACAGACG-----------------------------------------------------------------------------------------------------------------------------------GACATG---GTTACTTAACTTATAT--------------------------------------------------------------------------------------------------------TTT-----------------------------A----A----------------TA-------------------------------------------------T-------------------------TTTTACAATT-TTGTCTTACTTTTTTAGGCATTGA-GTATCTCGTTGAAAACAGGCTGCTACGTCATGATCCCCAGGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCTGCTACGTCATGATCCC......2411.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAGGCTGCTACGTC..............1811.0010010
.............................................................AGTTGCCCGACTATCAGATACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1111000
....................................................................................................................................................TTC------------------------------------------------------TGGGATATCGA-----TAGATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
droSim2
TCTGTTCTT-GAGAAGGTAGA------AGG--------------TAGAGAAGGTATAGTCGAGTTCCCCGACTATCAGATACCCGTTACTCGGCTAG---------------------TGGAAATGCGAACTCGAAATTTTATCCTTTTTC------------------------------------------------------TGGGATATCGA-----TAGACATTGGG---------------------------------------------------------------------------------------------------------GAATAAA----TGAGA---------------A------------ATGAG----------------AAAATATTTAAATATTATTA---------------------------------------------------------------------------------------------------------TATATGTATTAATTATATTGAATATTTATTATAT---------------------------------------------------------------------------------------------------------TTA------------------------------TTTGTTTGATTATCCCA-ATGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................TAG---------------------TGGAAATGCGAACTCGAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2442.751100000071120000000
.............................................................................................CTAG---------------------TGGAAATGCGAACTCGAAATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2532.00600130011000000000
..................................................................................CCGTTACTCGGCTAG---------------------TGGAAATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000200000000
.....................................................................................................................................................................................................................CGA-----TAGACATTGGG---------------------------------------------------------------------------------------------------------GAATAAA----TGAGA---------------A------------A...................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
..................................................................................................................................................TTTTC------------------------------------------------------TGGGATATCGA-----TAGACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000100000000
.................................................................................................................................................TTTTTC------------------------------------------------------TGGGATATCGA-----TAGACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000001000000000
...................................................................................................................................................TTTC------------------------------------------------------TGGGATATCGA-----TAGACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000001000000000
.........................................................GTCGAGTTCCCCGACTATCAGATACCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.45900000010008000000
..............................................................................................TAG---------------------TGGAAATGCGAACTCGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000010000000
...............................................................................................AG---------------------TGGAAATGCGAACTCGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100000001000000000
...............................................................................................AG---------------------TGGAAATGCGAACTCGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25110000000000000000
......................................................................................................................TGGAAATGCGAACTCGAAATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100000001000000000
................................................................................................G---------------------TGGAAATGCGAACTCGAAATTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000010000000000
.............................................................................................................................................................................................................TGGGATATCGA-----TAGACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.20100000000001000000
.............................................................................................CTAG---------------------TGGAAATGCGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.10200000000002000000
...................................................................................................................................................TTTC------------------------------------------------------TGGGATATCGA-----TAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
.........................................................GTCGAGTTCCCCGACTATCAGATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000001000
..............................................................................................TAG---------------------TGGAAATGCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
.........................................................GTCGAGTTCCCCGACTATCAGATACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
.............................................................................................CTAG---------------------TGGAAATGCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
..............................................................................................TAG---------------------TGGAAATGCGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
...............................................................TTCCCCGACTATCAGATACCCGTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
dm3
AAATATTTT-GAATTAAAAAA------AAG--------------AGAGAATGTTATAGTCGAGTTCCCCGACTATCTAATACCCGTTACTCAGCTGC---------------------TGGCAGTGAGAACGTGATATTTCATAATT-TTC------------------------------------------------------TGGCATATCGA-----TAGATATTGGA---------------------------------------------------------------------------------------------------------GAATTTA----ATGGG---------------A------------AGGCG------------------------------------------------------------------------TGGCTGCATGGATGAACAAACTTGTGC--------------------------TTT-----------------------------A----G----------------AA-------------------------------------------------T-------------------------C--TGTATGCTTTATCTTAACC---------------------------------------------------TTATAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................AATGTTATAGTCGAGTTCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21182.67480000000000000000000000000000000000000000100000000000110000000000000000000000000000000000000000000000000000000000000300000000000000000000000000005000100000000000000000000000000000000000000000000000000000000000000000000031911041000000000000000000000000000000000000000000000600100000000000000000002000000210000000000001000101100000
............................AG--------------AGAGAATGTTATAGTCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.5551000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000100200000000000000001100000000000000000000000000000000000000000001413001160000000000000000503000000010000000000000000000000000
...............................................GAATGTTATAGTCGAGTTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21192.16410000000000000000000000000000000000000010100000000100000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000002000000000100011351103000000000000000000000000000000000000000000000100000000000000000000011000000240000000000000000312000000
.............................................GAGAATGTTATAGTCGAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.15430000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000030000000000020022972201000000000000000000000000000000000000000000010300020000000000000000002000000010000000000000000110000000
................................................................................................................................................ATT-TTC------------------------------------------------------TGGCATATCGA-----TAGATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAG--------------AGAGAATGTTATAGTCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.853700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000100000000000000010000000000000002000010000000000000000000000000000000000000000000021200260000000000000000103000000100000000000000000120000000
............................................AGAGAATGTTATAGTCGAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.65330000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000040000000000003000000000100000110011000000000000000000000000000000000000000000000700060000000000000000012000000110000000000000000000000000
................................................................................................................................................ATT-TTC------------------------------------------------------TGGCATATCGA-----TAGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ATT-TTC------------------------------------------------------TGGCATATCGA-----TAGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................A----ATGGG---------------A------------AGGCG------------------------------------------------------------------------TGGCTGCATGG............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................G--------------AGAGAATGTTATAGTCGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.95190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000010310111000000000000000000000000000000000000000000002300000000000000000000000000000120000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------A----G----------------AA-------------------------------------------------T-------------------------C--TGTATGCTTTATCT..............................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000010000000000000000000000000000000000
..............................................AGAATGTTATAGTCGAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000001100000000000000000000000000000000000000000000000004300000000000000000000001000000000000000000000000000000000
................................................AATGTTATAGTCGAGTTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000030000000000000002000000000000000000000000000000000000
...............................................GAATGTTATAGTCGAGTTCCCCGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TAGATATTGGA---------------------------------------------------------------------------------------------------------GAATTTA----AGT..................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................TATCGA-----TAGATATTGGA---------------------------------------------------------------------------------------------------------GAAT............................................................................................................................................................................................................................................................................................................................................................................................2160.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAAAA------AAG--------------AGAGAATGTTATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000
............................................AGAGAATGTTATAGTCGAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310001000000000000000000000000000000000000000000001100000000000000000010000000000000000000000000000010000000
..................................................................................................................................................T-TTC------------------------------------------------------TGGCATATCGA-----TAGATATTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGAATGTTATAGTCGAGTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000300000000000000000000011000000000000000000000000100000000
...........................AAG--------------AGAGAATGTTATAGTCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000002000020000000000000000100000000000000000000000000000000000
...................AA------AAG--------------AGAGAATGTTATAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................A------AAG--------------AGAGAATGTTATAGTCGAGTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GAGAATGTTATAGTCGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................AAAA------AAG--------------AGAGAATGTTATAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................ATGTTATAGTCGAGTTCCCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................TT-TTC------------------------------------------------------TGGCATATCGA-----TAGATATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AG--------------AGAGAATGTTATAGTCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000001000000000000000000000000000000000
............................................AGAGAATGTTATAGTCGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTATAGTCGAGTTCCCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GAATGTTATAGTCGAGTTCCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................AG--------------AGAGAATGTTATAGTCGAGTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................TGTTATAGTCGAGTTCCCCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.............................................GAGAATGTTATAGTCGAGTTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGAATGTTATAGTCGAGTTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................G--------------AGAGAATGTTATAGTCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
droEre2
AGTC--------------------------------------------------------GAGTTTCCCGACTATCAGATACCCGTTACTCAGCTAG---------------------TGGAAGTGCAAACGAGAAATTTCAACATTTT-------------------------------------------------------------------------------------------------------------------TAAT------------TTTTTTGAATTTCT-------------------------------------------ACACATA----ATACA---------------T------------CAGAAAA---ATTAC------AAAAAAATTACATTTTA---------------------------------------------------------------------------------------------------------------------------------A----------------AA-------------------------------------------------ATTTT-CTAAATT-TGAATGCAGTTTT-----------------------TTAGAGAA--------------------------TTGCGCCAGA-------AACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................AACGAGAAATTTCAACATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
droYak3
AGTC--------------------------------------------------------GAGTTCCCCGACTATCAGATACCTGTTACTCAGCTAG---------------------AGGCAGTGCCTAATC--------TTAACT-TTCTAGCTTTAATAGTTCCTGAATTCTCGACGGTCAGCCAGACGGACATGGCCAGTTCAACTCGGCTA-----TTGATCCTGAT---------------------------------------------------------------------------------------------------------AAAGA---------------------------------------------------------------------------------------------------------------------------------------------------TTTGAGT-TTATTTT----------TATGGGCGTGTAATAGATCTAGGAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------AACTGGTTGTTCCGC---------CCAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AATC--------------------------------------------------------GAGTACTTCGACTATAAGATACCCGTCATTCATGTAAGAAATACGAAAATGAATCAGTTGC---------CATAATATTACGC------------------------------------------------------------------------------AATATATTAGGTCGTCAAAAAAGTCTTGCG-----------------------------------------------------------------------------------------------------------------------------------GTATTT---TCTTTTTAGTTTTAAT--------------------------------------------------------------------------------------------------------TTT-----------------------------A----T----------------TT-------------------------------------------------A-------------------------ATTTTTAATT-TTTTT--------TTAAATTTTCAATT--------------------------------------ATTSizeHit CountTotal NormTotal
No Reads
droBia1
CTAAGATCTCGAAAACT----AAAAGA--GTTAGAGCAGTCGGACTTGGCATGCA------GGTTCCTGGGCTACCTA------------------------------------------CGCACGCCCACTCGAACGCCCACAATTTGC------------------------------------------------------------------GAAAA------------------------------TCTGTAGCGTCTTCAAT------------TTTTATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACGTAATATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------AA---------------------CTGAAATSizeHit CountTotal NormTotal
No Reads
droTak1
GATTTTT---GACAATAAAAG------AAG--------------AGAGAACGCTATAGTCGGGTGCCCCGACTATCAGCTACCCGTTACTCATCTAA---------------------AGGGAGTGCGAAGGAGA------TGGGGA-TAAAAACTTTGATCCGCCGTAACTTTTTAACGAATGGACCGATTTAAAAAATTTCTTCTACATTTCGA-----TAGGTATTGAT---------------------------------------------------------------------------------------------------------AAACACA----ATAAA---------------A------------CTGCATT---TTTACTTTTCCGAAATATTGAAATTTTTAAAATCGTATATTAGCGATTGTGGGCGTTA----------------GTTTTCAAACAAACTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCGTAG-GAACTCCTAGAASizeHit CountTotal NormTotal
No Reads
droEle1
TTGAGATCTCTGAAACT----ATAAAG--G------------GATTTAAAATGTA------GATTCTAGTT-----ATACAAACATTGTTCGGCAAA---------------------TGGCGTCTCCAA----AAACCCTATAATTTTCA------------------------------------------------------GGGGACAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTATTAT-----------------------------------------------------------------TTTGAAATTGGTTAGTTGAGTAACGGGTATCTAATAGTCGCGTCACTCAACTTTT-CTTCATT-TATGTATATTTAT-----------------------TTATGTGTT---TT--------------------------------------ATTSizeHit CountTotal NormTotal
No Reads
droRho1
TAAATATTA--AC--------------AAG--------------AGAAAACGCTATAGTCGGGTGACCCGACTATCAGATACCCGTTACTCAGGTAA---------------------AGGGAGTGCGAGGGAGA------TGGAGA-TAGAAACTTTGATCACGCATAACTTTTTAACGAATGGTCCGATTTGAAAAATTTCTTCTACATTTCGA-----TAGGTATTGAT---------------------------------------------------------------------------------------------------------AAACACA----ATAAA---------------A------------CTGCATT---TTTACTTTTCCGAAATATTTAAATTTTTAAAATCTTATATAAGCGATTGTGGGCGTTAAAGGGGGCGTGGCACCATTTTGAAACAAACTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCGTAAGAACTC-CTAGAASizeHit CountTotal NormTotal
No Reads
droFic1
CTTTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGCATTGA-ATATCTCGTAGAGAACAGACTGCTTCGTCACGATCCCCAGGATSizeHit CountTotal NormTotal
No Reads
droKik1
TAGAAATGCTCAATAAAATT-GTAGAA--A------------TAATT--AAATTATAACTTAGCTGTTTGACAA---------------------------------------------------------------------------------------------------------------------------------------------------TATATGTTCAT-CATTATTGAGACATGGCAATTTTTTATTTCAGATT------------TTTAATTTTA--------TGAAA---ATCGGACGACTATATCTTTTAGCTGCCATAG---------------GAACGATCGG---AA-T-------------------------------------------------------------------------------------------------------------------------------ATTAATTTTAACAACTTC-----------------------------A----ATATTTG------------------------------------------------------------------------------------------TTGATTT-TTAACTTATTTTCATCTAC-------------------------------------------TCTGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TTTATTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTCCAGGCATTGA-GTATCTCGTGGAGAACAGACTGCTGCGTCACGATCCCCAGGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACAGACTGCTGCGTC..............2011.001100000
droBip1
TACATTTCT-------------------------------------------------------TTCTTTATTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATTCCAGGCATTGA-GTATCTCGTGGAGAACCGACTGCTGCGTCACGATCCCCAGGATSizeHit CountTotal NormTotal
No Reads
dp5
TCTAATAT--------------------------------------------------------------------------TCCTTACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCCCTTTTCCAGGCATTGA-GTATCTCGTGGAGAACCGACTGCTGCGTCACGATCCCCAGGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACCGACTGCTGCGTCACG...........2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGA-GTATCTCGTGGAGAACCGAC.......................2711.0010010000000
droPer2
TTTGACGCCTAGAGACT----ATAGGA--GCTAGAGCAACCAAATTTTCCATCCA------GACTCCTGTGATGT-----C-GCACTGTT-----A----------------------------CAAGGAC-------------------------------------------------------------------------------------GGAAA------------------------------TCTGTGGAATCCACAGT------------TTTGAAGATACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GAATCATAGAGACAGACAGACATGGATTAGATCTGATTATTATTTT----------TATAGCCAGA-------------------A----GG---------------------------------AAAAAATGA--------------------------------------------------ATTTGCAATG-GCCACTCTCTTACTTAGAGACTGA-GTATC--------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................TACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GAATCA.................................................................................................................................................................................................................................................................2760.332020000
................................................................................................................................................................................................................................................................................................TACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GA.....................................................................................................................................................................................................................................................................23200.306051000
.....................................................................................................................................................................................................................................................................................................GAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GAATCATAG..............................................................................................................................................................................................................................................................25200.051010000
................................................................................................................................................................................................................................................................................................TACGAGAAAACTAAAA-----------------------------------------------------------------------------GCG.................................................................................................................................................................................................................................................................................................................................................19200.051010000
..............................................................................................................................................................................................................................................................................................GATACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------G......................................................................................................................................................................................................................................................................24200.051010000
................................................................................................................................................................................................................................................................................................TACGAGAAAACTAAAA-----------------------------------------------------------------------------GCGCA------------------------------------------------------------------------GAATA..................................................................................................................................................................................................................................................................26200.051010000
............AGACT----ATAGGA--GCTAGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100
droWil2
TCCGTCTGTCGGAGAAT----ATAAGA--GCTAGATCCACCAAT--TGGTATATA------GA------------------CTCTTTTCTTAAAAAC---------------------TATGAA--------------------AGCTACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATTAA------ATTGTTCTTAC-----------------------------------------------------------------TTTC--ATTCGTTTTTTGTTTAATATACATATATATGTCGGGGCGCTAAGATTTTTGTTTGTTCCACTCATGTTTCTTTTGCAGTTTTCACTTTAGA---------------CT--------------------------------------TTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTTTGTTTGTTCCACTCATGT..................................................................................2511.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA------ATTGTTCTTAC-----------------------------------------------------------------TTTC--ATTCGTT..............................................................................................................................................2511.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTTCCACTCATGTTTCTTTTAA.........................................................................2660.17101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTTGTTCCACTCATGTTTCTT.............................................................................2660.17100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGTTCCACTCATGTTTCTTTT...........................................................................2560.17101000
........................................................................................CTTAAAAAC---------------------TATGAA--------------------AGCTACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................................................................................24200.05100100
droVir3
CCTCAGTTTTAAAGC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGAACTCACTTCTTTCTGTTGCACGCAGCACATATGTGAAAACCAGCTGGATCGGACCACTATATCATATAGCTGCCATAG---------------GAACAATCGGTCGAAAATTAGGTTTTTGTATGAA----------------AAAACATTTTGT--TTATCA---------------------------------------------A----------------------------GATATCTTGACCAAACTC-----------------------------G----GCATTTTTTAGTTTTACTTTAC------------------------------------------------------------------------------------------TC-CTCATATATGTTCA-AAATCCTATTAAAATCGGAGCGCTATATCAT------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGAAAAT...............................................................................................................................................................................................................................................................................................................................................................26203.00600030000000000000000000007000000010490000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGAAAATT..............................................................................................................................................................................................................................................................................................................................................................27201.50300000000100000000000000000001000000280000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGAAAATTA.............................................................................................................................................................................................................................................................................................................................................................28200.5010000000000000000000000000000100000090000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGAAA.................................................................................................................................................................................................................................................................................................................................................................24200.459000000000000000000000000000000000070002000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCG....................................................................................................................................................................................................................................................................................................................................................................21200.255000020000000000000000000000100000010100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGA...................................................................................................................................................................................................................................................................................................................................................................22200.153000000000000000000000000001100010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CTGGATCGGACCACTATATCATATAG.........................................................................................................................................................................................................................................................................................................................................................................................................26200.153300000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TATGTGAAAACCAGCTGGATCGGACCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................28200.153300000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCTGTTGCACGCAGCACATATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000200000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCCATAG---------------GAACAATCGGTCGAAAATT..............................................................................................................................................................................................................................................................................................................................................................26200.153000000000000000000002000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACTTTAC------------------------------------------------------------------------------------------TC-CTCATATATGTTC.............................................2570.141000000000000000000000000100000000000000000000000000000000000000
..........................................................................T--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000010100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCCATAG---------------GAACAATCGGTCG....................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TCTTTCTGTTGCACGCAGCACATATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000200000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCTGTTGCACGCAGCACATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000000020000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCTGTTGCACGCAGCACATATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000200000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CTTCTTTCTGTTGCACGCAGCACATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................26120.081000000000000000000000000001000000000000000000000000000000000000
........TTAAAGC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000000000000000000000000000001
.............GC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TATCATATAGCTGCCATAG---------------GAACAATC.........................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCATATAGCTGCCATAG---------------GAAC.............................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................AGCTGCCATAG---------------GAACAATC.........................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCCATAG---------------GAACAATCGGTCGAAAATC..............................................................................................................................................................................................................................................................................................................................................................26200.051000010000000000000000000000000000000000000000000000000000000000
.............GC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGAACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................T--TTATCA---------------------------------------------A----------------------------GATATCTTGACCAAACTC-----------------------------G----GC...........................................................................................................................................................................29200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TAGCTGCCATAG---------------GAACAATCGGTCG....................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
.......TTTAAAGC-T--------------------------------------------------------AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAAAACCAGCTGGATCGGACCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTGACCAAACTC-----------------------------G----GCATTT.......................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA---------------------------------------------A----------------------------GATATCTTGACCAAACTC-----------------------------G----GCA..........................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TATCATATAGCTGCCATAG---------------GAACA............................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTCTGTTGCACGCAGCACATATGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ATATAGCTGCCATAG---------------GAACAATC.........................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................AT--------------------------------------------------CTTAAT-------------------------------------------------------------------------------------GAAAC------------------------------TTTGCAGAACTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTTTACTTTAC------------------------------------------------------------------------------------------TC-CTCATATA..................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGCCATAG---------------GAACAATCGGTCGAAAATC..............................................................................................................................................................................................................................................................................................................................................................27200.051000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCTTGACCAAACTC-----------------------------G----GC...........................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATATCATATAGCTGCCATAG---------------.................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCACGCAGCACATATGTGAAAACCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGAAAACCAGCTGGATCGGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAAAAATCTCAGAAGAT----ATAAGA--GCTAGAG-AGCTGAA--TGGCATGCA------TACTCGTATATA--------------------CCAT---------------------AGGCAGTACGAGTTTGC------TTTATTTTTT------------------------------------------------------CGATAACTCAT-----CCGATAAC----------------------------------------------------------------------------------------------------------------TTTTTTAACGAGAATAATCGA---AA-A------------ATCGA-CTTTGTTTTTTCAGCCTAAT--------------------------------------------------------------------------------------------------------TTG-----------------------------A----A----------------CA-------------------------------------------------C-------------------------TT---------------------------------------------------------------------TTAGACTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGCCTAAT--------------------------------------------------------------------------------------------------------TTG-----------------------------A----A----------------CA-------------------------------------------------C-------------------------T..............................................................................21200.051000001
................................................................................................................................................................................................................................................................................................................................................................................A------------ATCGA-CTTTGTTTTTTCAGCCTA............................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................TCGA---AA-A------------ATCGA-CTTTGTTTTTTCAGCC..............................................................................................................................................................................................................................................................................................................................28200.051000010
................................................................................................................................................................................................................................................................................................................................................................................A------------ATCGA-CTTTGTTTTTTCAGCCTAAT--------------------------------------------------------------------------------------------------------T.................................................................................................................................................................................................................27200.051100000
.............................................................................................................................................................................................................................................................................................................................................................CGAGAATAATCGA---AA-A------------ATCGA-..............................................................................................................................................................................................................................................................................................................................................21200.051000010
droGri2
TATTTTT-----------------------------------------ACATAT------------------------------------------------------------------------------------------------------------------------------------------------ATATATTCTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CTTGCAGGCATTGA-GTATCTCGTGGAGAATCGACTGTTACGTCACGATCCGCAGGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/17/2015 at 11:26 PM