ID:

dse_108

 Coordinate:

scaffold_0:12070610-12070669 +

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATATTCTAAACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCTGTTGCTTCTCAAGAGCTTCCAAGATTTTTGAGGACAACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAGATTTTGAGCATATTGATAAGGACA

***********************************.....((((((((((...((((((.((((.((((((((((((....)).)))))))))))))).))))))...))))))).))).....************************************ 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 V115

head

 M054

female body

 V114

embryo
.......................................................................................TTGAGGACAACTGAGGACCGCA................................................... 22 0 1 38.00 38 20 12 3 3
......................................................................................TTTGAGGACAACTGAGGACCGC.................................................... 22 0 1 13.00 13 2 5 1 5
........................................................................................TGAGGACAACTGAGGACCGCA................................................... 21 0 1 12.00 12 5 6 0 1
.......................................................................................TTGAGGACAACTGAGGACCGC.................................................... 21 0 1 11.00 11 3 5 2 1
..................................................CCAGTCCTCTGTTGCTTCTCAAG....................................................................................... 23 0 1 9.00 9 2 0 7 0
.......................................................................................TTGAGGACAACTGAGGACCGCAA.................................................. 23 0 1 9.00 9 2 4 2 1
........................................................................................TGAGGACAACTGAGGACCGCAA.................................................. 22 0 1 8.00 8 2 0 2 4
......................................................................................TTTGAGGACAACTGAGGACCGT.................................................... 22 1 1 7.00 7 1 6 0 0
.......................................................................................TTGAGGACAACTGAGGACCGTT................................................... 22 2 1 6.00 6 3 2 0 1
..................................................CCAGTCCTCTGTTGCTTCTC.......................................................................................... 20 0 1 6.00 6 0 4 2 0
.......................................................................................TTGAGGACAACTGAGGACCGA.................................................... 21 1 1 5.00 5 1 0 3 1
.......................................................................................TTGAGGACAACTGAGGACCGT.................................................... 21 1 1 5.00 5 4 1 0 0
........................................................................................TGAGGACAACTGAGGACCGC.................................................... 20 0 1 4.00 4 0 2 2 0
......................................................................................TTTGAGGACAACTGAGGACCGTT................................................... 23 2 1 3.00 3 2 0 1 0
...............................................................................................................................GACGATAAGATTTTGAGC............... 18 0 1 3.00 3 0 0 1 2
..................................................CCAGTCCTCTGTTGCTTCTCA......................................................................................... 21 0 1 3.00 3 2 1 0 0
..................................................................................GATTTTTGAGGACAACTGAGG......................................................... 21 0 1 3.00 3 1 0 0 2
......................................................................................TTTGAGGACAACTGAGGACCG..................................................... 21 0 1 3.00 3 1 2 0 0
......................................................................................TTTGAGGACAACTGAGGACCGA.................................................... 22 1 1 2.00 2 0 0 0 2
...................................................................................ATTTTTGAGGACAACTGAGG......................................................... 20 0 1 2.00 2 0 0 0 2
......................................................................................TTTGAGGACAACTGAGGACCGCA................................................... 23 0 1 2.00 2 0 2 0 0
.......................................................................................TTGAGGACAACTGAGGACCGCC................................................... 22 1 1 2.00 2 2 0 0 0
......................................................................................TTTGAGGACAACTGAGGACCGCT................................................... 23 1 1 2.00 2 1 1 0 0
.......................................................................................TTGAGGACAACTGAGGACCGTTT.................................................. 23 3 1 1.00 1 0 0 1 0
...................................................CAGTCCTCTGTTGCTTCT........................................................................................... 18 0 1 1.00 1 0 1 0 0
...................................................CAGTCCTCTGTTGCTTCTCA......................................................................................... 20 0 1 1.00 1 0 0 1 0
..................................................CCAGTCCTCCGTTGCTTCTCAAG....................................................................................... 23 1 1 1.00 1 0 0 0 1
.......................................................................................TTGATGACAACTGAGGACCGCAA.................................................. 23 1 1 1.00 1 0 1 0 0
.......................................................................................TTGAGGACAACTGAGGACTGC.................................................... 21 1 1 1.00 1 1 0 0 0
...............................................................................................................................GACGATAAGATTTTGAGCA.............. 19 0 1 1.00 1 1 0 0 0
......................................................................................................GACCGCAACAGACTCAGCTGACAAT................................. 25 0 1 1.00 1 0 0 1 0
.......................................................................................TTGAGGACAACTGAGGACCGCT................................................... 22 1 1 1.00 1 1 0 0 0
..................................................................................GATTTTTGAGGACAACTGAGGA........................................................ 22 0 1 1.00 1 0 0 0 1
......................................................................................TTTGAGGACAACTGAGGACCC..................................................... 21 1 1 1.00 1 0 1 0 0
.......................................................................................TTGAGGACGACTGAGGACCGCAA.................................................. 23 1 1 1.00 1 1 0 0 0
......................................................................................TTTGAGGACAACTGAGGACC...................................................... 20 0 1 1.00 1 0 0 1 0
........................................................................................TGAGGACAACTGAGGACCGCATT................................................. 23 2 1 1.00 1 1 0 0 0
......................................................................................TTTCAGGACAACTGAGGACCGC.................................................... 22 1 1 1.00 1 0 1 0 0
...................................................................................................................................ATAAGATTTTGAGCATATT.......... 19 0 1 1.00 1 1 0 0 0
.........................................................................................GAGGACAACTGAGGACCGCAA.................................................. 21 0 1 1.00 1 0 0 1 0
.......................................................................................TTGAGGACAACTGAGGACCGCAT.................................................. 23 1 1 1.00 1 1 0 0 0
........................................................................................TGAGGACAACTGAGGACCGCAACA................................................ 24 0 1 1.00 1 0 1 0 0
......................................................................................TTTGAGGACAACTGAGGGCCGT.................................................... 22 2 1 1.00 1 0 0 0 1
.......................................................................................TTGAGGACAACTGAGGACC...................................................... 19 0 1 1.00 1 0 1 0 0
......................................................................................TTTGAGGACACCTGAGGACCCCA................................................... 23 2 1 1.00 1 0 0 1 0
.......................................................................................TTGAGGACGACTGAGGACCA..................................................... 20 2 1 1.00 1 1 0 0 0
..................................................CCAGTCCTCTGTTGCTTCTCAAGT...................................................................................... 24 1 1 1.00 1 1 0 0 0
....................................................................................TTTTTGAGGACAACTGAGG......................................................... 19 0 1 1.00 1 0 0 0 1
........................................................................................TGAGGACAACTGAGGACCG..................................................... 19 0 1 1.00 1 0 1 0 0
....................................................................................ATTTTGAGGACAACTGAGGACCG..................................................... 23 1 1 1.00 1 1 0 0 0
....................................................................................TTTTTGAGGACAACTGAGGACCGCAAC................................................. 27 0 1 1.00 1 0 0 0 1
.........................................................................................................................GACAATGACGATAAGATTTTGAG................ 23 0 1 1.00 1 1 0 0 0
.......................................................................................................ACCGCAACAGACTCAGCTGACAATGACG............................. 28 0 1 1.00 1 0 0 1 0
.......................................................................................CTGAGGACAACTGAGGACCGTA................................................... 22 2 1 1.00 1 1 0 0 0
......................................................................................TTTGAGGACAACTGAGGACCT..................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................CCTCTGTTGCTTCTCAAGAGC.................................................................................... 21 0 1 1.00 1 1 0 0 0
.......................................................CCTCTGTTGCTTCTCAAGAGCT................................................................................... 22 0 1 1.00 1 0 0 0 1
.......................................................................................TTGAGGACAACTGGGGACCGCAA.................................................. 23 1 1 1.00 1 0 0 0 1
..................................................CCAGTCCTCTGTTGCTTCT........................................................................................... 19 0 1 1.00 1 0 0 1 0
.......................................................................................TTGAGGACGACTGAGGACCGC.................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................TTGAGGACAACTGAGGACCCA.................................................... 21 2 1 1.00 1 1 0 0 0
.......................................................................................TTGAGGACAACTGATGACCGTT................................................... 22 3 1 1.00 1 1 0 0 0
.......................................................................................TTGAGGACAACTGAGTACCGT.................................................... 21 2 1 1.00 1 0 1 0 0
....................................................................................TTTTTGAGGACAACTGAGGA........................................................ 20 0 1 1.00 1 1 0 0 0
.................................................TCCAGTCCTCTGTTGCTTCTCAA........................................................................................ 23 0 1 1.00 1 0 0 1 0
.....................................................GTCCTCTGTTGCTTCTCAA........................................................................................ 19 0 1 1.00 1 0 0 1 0
.......................................................................................TTGAGGACAACTGAGGACCCCA................................................... 22 1 1 1.00 1 1 0 0 0
....................................................AGTCCTCTGTTGCTTCTCAAGAG..................................................................................... 23 0 1 1.00 1 0 0 0 1
.....................................................................................TTTTGAGGACAACTGAGGACCGT.................................................... 23 1 1 1.00 1 0 1 0 0
............................................................GTTGGTTTTCAAGAGCTT.................................................................................. 18 2 16 0.06 1 0 1 0 0
................................................................ATTCTCCAGAGCTGCCAAG............................................................................. 19 3 20 0.05 1 0 0 1 0

Anti-sense strand reads

TATAAGATTTGTACGGTTGGTAATGTTATTAGACGTAATAGACCAGACAAGGTCAGGAGACAACGAAGAGTTCTCGAAGGTTCTAAAAACTCCTGTTGACTCCTGGCGTTGTCTGAGTCGACTGTTACTGCTATTCTAAAACTCGTATAACTATTCCTGT

************************************.....((((((((((...((((((.((((.((((((((((((....)).)))))))))))))).))))))...))))))).))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body		 V115

head

 V114

embryo
.....................................................................GTTCTGGAAGGTTTTAAAA........................................................................ 19 2 2 2.00 4 2 0 1 1
.....................................................................GTTCTGGAAGGTTTTAAAAA....................................................................... 20 2 1 1.00 1 0 1 0 0
......................................................................TTCTGGAAGGTTTTAAAAA....................................................................... 19 2 3 0.33 1 1 0 0 0
.....................................................................GTTCTGGAAGGTTTTAAAAAG...................................................................... 21 3 8 0.13 1 1 0 0 0
..........GTACGGTTGGTAATGTGG.................................................................................................................................... 18 2 11 0.09 1 0 0 1 0
.........CGTACGATTGGTAATGTGAT................................................................................................................................... 20 3 16 0.06 1 0 1 0 0
..............................................................................................................GTTTGAGTGGACTGTTAC................................ 18 2 16 0.06 1 0 1 0 0
.....................................................................GTTCTGGAAGGTTTTAAA......................................................................... 18 2 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:12070560-12070719 + dse_108 confident ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCTGTTGCTTCTCAAGAGCTTCC-------AAGAT--------------------------TTTTGAGGACAACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTGATAAGGACA
droSim2 3r:11240076-11240236 + dsi_32446 candidate ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTTTGTTCCAGTCCTCTGTTGCTTCTCAAGAGCTCCC-------AAGTTT-------------------------TTCTGAGGACAACTGAGGTCCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTGATAAGGACA
dm3 chr3R:9945601-9945775 - dme_446 ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATCATCTGGTCTGTTCCAGTCCTCTGCTGCTTCTCAAGAGCTCCA------AAAAATTTCAATTCAG-TTATC--GGAGAG--TT-------AGACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTAATAAGGACA
droEre2 scaffold_4770:9494414-9494593 - der_1532 ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTGTGTTCCAATCCTCCGCTGCTTCTCAAGAGCTCCC-------AAGATTTCAATTG-A-GTATC--GGGGAC--ATCTGAGGTCAACTGAGGACCGGAACAGACTCAGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
droYak3 3R:16483053-16483233 + dya_1812 ATAATCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGTTGCTTCTCAAGAGCTTCA-------AAGATTTCGATAG-AGTTTTT--GGGGAC--TTCTGAGCTCAACTGGGGACCGGAACAGACTCAGCTGACAATGACGATAAT-ATTTTGAGCATA--TTGATAAGGACA
droEug1 scf7180000409584:571101-571281 + ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTAGTCTGTTACAGTCCTCCGCTGCTTCTCAAGAACTCCC-------GTGATTTGAATTA-AAGAATC--TAAGAT--TTCTAAGGACAACTGAGGACCGCAACAGGCTAAGTTGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACA
droBia1 scf7180000302402:2747989-2748172 - ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGATGCTTCTCAAGAACGACC------CACGATTTCGTTTCTG-TGATC--AGGGGCTGTTATGAGGACAACTGAGGACCGCAACAGGCTCAGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
droTak1 scf7180000415380:857233-857415 - ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGCTGCTTCTCAAGAACCTCT-------AAGATATCATTTCAA-TGATC--AGGGACGGTTGTGAGGACAACTGAGGACCGCAACAGGCTCAGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
droEle1 scf7180000491047:1202069-1202248 + ATATTCTTA--ACATGCCAACCATTACAATAATCTGCATTATCTGGCCTGTTGCAGCCCTCTGCTACTTCTCAAGAACTCCC-------AATTTTTCGCTTA-G-ATATC--GAGGGC--TTCTGAGGACAAGTGAGGGTCGCAACAGGCTCGGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
droRho1 scf7180000778033:13708-13887 - ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGCCTGTTCTGGTCCTCTGCTGATCCCCGAGAACCCCC-------AAGATATCCCTTG-G-ACATC--GAGGCA--TTTTGAGGACAACTGAGAACCGAGACAGGCTCGGTTGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACA
droFic1 scf7180000453912:452011-452190 - ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCTGCTGTTTCTCCAGAACCGCC-------AAGATTTCGTTTA-G-TTATC--GAGTTC--TTCTGGGGACAACTGAGGATCGCAACAGGCTCGGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
droKik1 scf7180000297719:32375-32492 + ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGACTTGTAGA----------------------------------------------G-G-----------------------GTCCTTGGAGGTTTGAAACAGGCTCGTTTGACAATGACGATAACAATTTTGAGCA--------TAAGGACA
droAna3 scaffold_13340:20519499-20519662 + dan_4045 ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCCAGTCTGTTTCGCTCCTCTGCTGTTCTTCTGA-GGTCCC------AAAAA--------------------AAGAA--TTCTATGGACAGCCGAGGACCGCAACAGGCTCGGCCGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACA
droBip1 scf7180000396413:1886090-1886251 - ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCCAGCCTGTTTCGCTCCTTTGCTGTCCTTCAAT-GCTCTG------AAA----------------------AAGGA--GTCTGAGGACAGCGGAGGACCGCAACAGGCTCGGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACA
dp5 2:13441333-13441519 + dps_3842 -TATTCTAAAAACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCCGTCTTCAGGCGTT-CCCAAAAG-----AAAACTCGAGACTTTACTAA-A-CTCTTTTTTCGAT--TTCTTTTGGAAGCTAAAGACCGGCACAGACTCGTTTGACAATGACGATAACGATTTTGAGCATATTTTGATAAGGACA
droPer2 scaffold_0:7007853-7008037 - -TATTCTAAAAACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCCGTCTTCAGCCGTT-CCCAAAAG-----AAAACTCGAGACTTTACTAA-A-CTCTT--TGCGAT--TTCTTTTGGAAGCTAAAGACCGGCACAGACTCGTTTGACAATGACGATAACGATTTTGAGCATATTTTGATAAGGACA
droWil2 scf2_1100000004902:10821088-10821095 - GTGTTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:17985316-17985383 - GAATT-------------AACAATAATAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAAC-GATTTCCGGATA--TTGATAATGATA
droMoj3 scaffold_6540:13726463-13726530 + GAATT-------------AACAATAACAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------AACGCAAACGATAAG-AATTTGCGCATA--TTGATAATGATA
droGri2 scaffold_14846:23933-24007 - ATGGAATCA--AC-----AACAATAACAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAAC-GATTTGCGCATAG-AAGTTAATGATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCTGTTGCTTCTCAAGAGCTTCC-------AAGAT--------------------------TTTTGAGGACAACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................TTGAGGACAACTGAGGACCGCA......................................................22138.0038320312
.........................................................................................................................TTTGAGGACAACTGAGGACCGC.......................................................22113.00131255
...........................................................................................................................TGAGGACAACTGAGGACCGCA......................................................21112.00120516
..........................................................................................................................TTGAGGACAACTGAGGACCGC.......................................................21111.00112315
....................................................CCAGTCCTCTGTTGCTTCTCAAG...........................................................................................................................2319.0097200
..........................................................................................................................TTGAGGACAACTGAGGACCGCAA.....................................................2319.0092214
...........................................................................................................................TGAGGACAACTGAGGACCGCAA.....................................................2218.0082240
.........................................................................................................................TTTGAGGACAACTGAGGACCGT.......................................................2217.0070106
..........................................................................................................................TTGAGGACAACTGAGGACCGTT......................................................2216.0060312
....................................................CCAGTCCTCTGTTGCTTCTC..............................................................................................................................2016.0062004
..........................................................................................................................TTGAGGACAACTGAGGACCGA.......................................................2115.0053110
..........................................................................................................................TTGAGGACAACTGAGGACCGT.......................................................2115.0050401
...........................................................................................................................TGAGGACAACTGAGGACCGC.......................................................2014.0042002
.........................................................................................................................TTTGAGGACAACTGAGGACCGTT......................................................2313.0031200
..................................................................................................................................................................GACGATAAG-ATTTTGAGC.................1813.0031020
....................................................CCAGTCCTCTGTTGCTTCTCA.............................................................................................................................2113.0030201
...........................................................................................GAT--------------------------TTTTGAGGACAACTGAGG............................................................2113.0030120
.........................................................................................................................TTTGAGGACAACTGAGGACCG........................................................2113.0030102
.........................................................................................................................TTTGAGGACAACTGAGGACCGA.......................................................2212.0020020
............................................................................................AT--------------------------TTTTGAGGACAACTGAGG............................................................2012.0020020
.........................................................................................................................TTTGAGGACAACTGAGGACCGCA......................................................2312.0020002
..........................................................................................................................TTGAGGACAACTGAGGACCGCC......................................................2212.0020200
.........................................................................................................................TTTGAGGACAACTGAGGACCGCT......................................................2312.0020101
..........................................................................................................................TTGAGGACAACTGAGGACCGTTT.....................................................2311.0011000
.....................................................CAGTCCTCTGTTGCTTCT...............................................................................................................................1811.0010001
.....................................................CAGTCCTCTGTTGCTTCTCA.............................................................................................................................2011.0011000
..................................................................................................................................................................GACGATAAG-ATTTTGAGCA................1911.0010100
.........................................................................................................................................GACCGCAACAGACTCAGCTGACAAT....................................2511.0011000
..........................................................................................................................TTGAGGACAACTGAGGACCGCT......................................................2211.0010100
...........................................................................................GAT--------------------------TTTTGAGGACAACTGAGGA...........................................................2211.0010010
.........................................................................................................................TTTGAGGACAACTGAGGACCC........................................................2111.0010001
.........................................................................................................................TTTGAGGACAACTGAGGACC.........................................................2011.0011000
...........................................................................................................................TGAGGACAACTGAGGACCGCATT....................................................2311.0010100
......................................................................................................................................................................ATAAG-ATTTTGAGCATA--TT..........1911.0010100
............................................................................................................................GAGGACAACTGAGGACCGCAA.....................................................2111.0011000
..........................................................................................................................TTGAGGACAACTGAGGACCGCAT.....................................................2311.0010100
...........................................................................................................................TGAGGACAACTGAGGACCGCAACA...................................................2411.0010001
..........................................................................................................................TTGAGGACAACTGAGGACC.........................................................1911.0010001
....................................................CCAGTCCTCTGTTGCTTCTCAAGT..........................................................................................................................2411.0010100
.............................................................................................T--------------------------TTTTGAGGACAACTGAGG............................................................1911.0010010
...........................................................................................................................TGAGGACAACTGAGGACCG........................................................1911.0010001
.............................................................................................T--------------------------TTTTGAGGACAACTGAGGACCGCAAC....................................................2711.0010010
............................................................................................................................................................GACAATGACGATAAG-ATTTTGAG..................2311.0010100
..........................................................................................................................................ACCGCAACAGACTCAGCTGACAATGACG................................2811.0011000
.........................................................................................................................TTTGAGGACAACTGAGGACCT........................................................2111.0010100
.........................................................CCTCTGTTGCTTCTCAAGAGC........................................................................................................................2111.0010100
.........................................................CCTCTGTTGCTTCTCAAGAGCT.......................................................................................................................2211.0010010
....................................................CCAGTCCTCTGTTGCTTCT...............................................................................................................................1911.0011000
..........................................................................................................................TTGAGGACAACTGAGGACCCA.......................................................2111.0010100
.............................................................................................T--------------------------TTTTGAGGACAACTGAGGA...........................................................2011.0010100
...................................................TCCAGTCCTCTGTTGCTTCTCAA............................................................................................................................2311.0011000
.......................................................GTCCTCTGTTGCTTCTCAA............................................................................................................................1911.0011000
......................................................AGTCCTCTGTTGCTTCTCAAGAG.........................................................................................................................2311.0010010
........................................................................................................................TTTTGAGGACAACTGAGGACCGT.......................................................2311.0010001
droSim2
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTTTGTTCCAGTCCTCTGTTGCTTCTCAAGAGCTCCC-------AAGTTT-------------------------TTCTGAGGACAACTGAGGTCCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................................................................................................ATGACGATAAG-ATTTTGAGC.................2016.00604200000000000000
...................................................TCCAGTCCTCTGTTGCTTCTCAAGA..........................................................................................................................2513.00300300000000000000
.....................................................................................................................................TGAGGTCCGCAACAGACTCAGCTGA........................................2513.00300000000003000000
..................................................................................................................................................AGACTCAGCTGACAATGACGATAAG-A.........................2612.00200000020000000000
................................................................TGCTTCTCAAGAGCTC......................................................................................................................1611.00100000000001000000
............................................................................GCTCCC-------AAGTTT-------------------------TTCTGAGGACAACT................................................................2611.00100100000000000000
...........................................................................................................................................................TGACAATGACGATAAG-ATTTTGAGCA................2611.00100010000000000000
............................................................................................................................................................GACAATGACGATAAG-ATTTTGAGC.................2411.00101000000000000000
............................................................................................................................................................GACAATGACGATAAG-ATTTTGAGCA................2511.00100100000000000000
.................................................................................................................................................CAGACTCAGCTGACAATGACGATAAG-A.........................2711.00100000001000000000
..............................................................................................T-------------------------TTCTGAGGACAACTGA..............................................................1711.00100000000001000000
.............................................................TGTTGCTTCTCAAGAGCTCCC-------AAGTT........................................................................................................2611.00100001000000000000
................................................................................................................................................ACAGACTCAGCTGACAATGACGATA.............................2511.00100000000000010000
..............................................................................................T-------------------------TTCTGAGGACAACTGAGGTCCGCAAC....................................................2711.00100000000001000000
...........................................................................................GTTT-------------------------TTCTGAGGACAACT................................................................1811.00101000000000000000
........................................................TCCTCTGTTGCTTCTCAAGAGCTCCC-------A............................................................................................................2711.00100000000001000000
...........................................................................................................................................................TGACAATGACGATAAG-ATTTTGAGC.................2511.00100010000000000000
..........................................................................GAGCTCCC-------AAGTTT-------------------------TTCTGAGGAC....................................................................2411.00101000000000000000
.......................................................................................................................................................................TAAG-ATTTTGAGCATA--TTGATAAGGAC.2711.00100000001000000000
.........................................................................................................................TCTGAGGACAACTGAGGTCC.........................................................2011.00110000000000000000
.............................................................................................TT-------------------------TTCTGAGGACAACTGAGGTCCGC.......................................................2511.00100000000001000000
.....................................................................................................................................................CTCAGCTGACAATGACGATAAG-ATT.......................2511.00100000010000000000
..............................................................................................T-------------------------TTCTGAGGACAACTGAGGT...........................................................2011.00101000000000000000
......................................................AGTCCTCTGTTGCTT.................................................................................................................................1570.14100000000001000000
dm3
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATCATCTGGTCTGTTCCAGTCCTCTGCTGCTTCTCAAGAGCTCCA------AAAAATTTCAATTCAG-TTATC--GGAGAG--TT-------AGACTGAGGACCGCAACAGACTCAGCTGACAATGACGATAAG-ATTTTGAGCATA--TTAATAAGGACASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................TTATC--GGAGAG--TT-------AGACTGAGGACC.........................................................2516.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000020000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TGACGATAAG-ATTTTGAGCATA--TT..........2414.004000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AG-ATTTTGAGCATA--TTAATAAG....2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GTCCTCTGCTGCTTCTCA.............................................................................................................................1814.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGACAATGACGATAAG-ATTTTGAGCA................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000
........................................................TCCTCTGCTGCTTCTCAAGAGCTC......................................................................................................................2414.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000110000000
...................................................TCCAGTCCTCTGCTGCTTCTCAAGAGC........................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TCTCAAGAGCTCCA------AAAAATTTCAAT..................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TCCA------AAAAATTTCAATTCAG-TTATC--GGA...................................................................................2813.003000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGAGGACCGCAACAGACTCAGCTGA........................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................CCTCTGCTGCTTCTCAAGAGCTCCA------AAA...........................................................................................................2813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AGACTCAGCTGACAATGACGAT..............................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAAG-ATTTTGAGCATA--TTAATAAGGAC.2713.003000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................AATAATCTGCATCATCTGGTC......................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GAGGACCGCAACAGACTCAGCTGACAAT....................................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AG-ATTTTGAGCATA--TTAATAAGGACA2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GACAATGACGATAAG-ATTTTGAGCA................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GAG--TT-------AGACTGAGGACCGCAACAGAA................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAATGACGATAAG-ATTTTGAGCATA--............2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TC--GGAGAG--TT-------AGACTGAGGACCGC.......................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCTGCTGCTTCTCAAGAGCTC......................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................TTTGAGCATA--TTAATAAGGAC.2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................C--GGAGAG--TT-------AGACTGAGGAC..........................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................G--TT-------AGACTGAGGACCGCAACA...................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GTCTGTTCCAGTCCTCTGCTGC...................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AACAGACTCAGCTGACAATGACGAT..............................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ACAATGACGATAAG-ATTTTGAGCATA--............2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AATGACGATAAG-ATTTTGAGCAT...............2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ACAGACTCAGCTGACAATGACGATAAG-A.........................2812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................ATTTTGAGCATA--TTAATAAGGAC.2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCAAGAGCTCCA------AAAAATTTCAAT..................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGTCTGTTCCAGTCCTCTGCT.....................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGAGGACCGCAACAGACTCAGCTGAC.......................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATCTGGTCTGTTCCAGTCCTCT........................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGAGGACCGCAACAGACTC..............................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TC--GGAGAG--TT-------AGACTGAGGACC.........................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................C--GGAGAG--TT-------AGACTGAGGACC.........................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................ATC--GGAGAG--TT-------AGACTGAG.............................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGACGATAAG-ATTTTGAGCATA--TT..........2512.002000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................C--GGAGAG--TT-------AGACTGAGGACCGC.......................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTATC--GGAGAG--TT-------AGACT................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AACAGACTCAGCTGACAATGA..................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTCCAGTCCTCTGCTGCTTCTCAA............................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAATGACGATAAG-ATTTTGAGCATA--T...........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCAG-TTATC--GGAGAG--TT-------AGACTGAGGA...........................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGACGATAAG-ATTTTGAGCT................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCTCTGCTGCTTCTCAAGAGCTCCA------..............................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................CAACAGACTCAGCTGACAATGACGATA.............................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GCAACAGACTCAGCTGACAATGACGA...............................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCTTCTCAAGAGCTCCA------AAAAAT........................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCTCTGCTGCTTCTCAAGAGCTCCA------AA............................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GAGAG--TT-------AGACTGAGGACCGCAACAG..................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................TCTGCTGCTTCTCAAGAGCTCCA------AAAAA.........................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAATGACGATAAG-ATTTTGAGT.................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CTGACAATGACGATAAG-ATTTTGAGCA................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................GAGAG--TT-------AGACTGAGGACCGCAA.....................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.............................................................................................TTTCAATTCAG-TTATC--GGAGAG--TT-------AGAC.................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGGTCTGTTCCAGTCCTCT........................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TTTGAGCATA--TTAATAAGG...1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GACTCAGCTGACAATGAC.................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AGACTCAGCTGACAATGACGATAAG-A.........................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CTCAGCTGACAATGACGATAAG-ATT.......................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................TGACGATAAG-ATTTTGAG..................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTCTGCTGCTTCTCAAGAGCTCCA------AAA...........................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AATTCAG-TTATC--GGAGAG--TT-------AGACT................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................TAAG-ATTTTGAGCATA--TTAATAAGGA..2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CCTCTGCTGCTTCTCAAGAGCTC......................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................CAGACTCAGCTGACAATGACGATAAC-..........................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AATAATCTGCATCATCTGGTCTGTTCC................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTAA--ACATGCCAACCATTACA..........................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATC--GGAGAG--TT-------AGACTGAGGACCGCA......................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AG-TTATC--GGAGAG--TT-------AGACTGA..............................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................AG-TTATC--GGAGAG--TT-------AGACTGAGGAC..........................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTACAATAATCTGCATCATCTGGTCTG....................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................A------AAAAATTTCAATTCAG-TTATC--GGA...................................................................................2511.001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ATTTCAATTCAG-TTATC--GGAGAG--T.............................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................AATAATCTGCATCATCTGG........................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................TATC--GGAGAG--TT-------AGACTGAGGACCGCAACA...................................................3011.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCTGCTTCTCAAGAGCTCCA------..............................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCTGGTCTGTTCCAGTCCTCTGCTGC...................................................................................................................................2611.001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CTCAGCTGACAATGACGATAAG-ATTTTGAG..................3011.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACCGCAACAGACTCAGCTGACAATGACGA...............................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AACAGACTCAGCTGACAATGACGA...............................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTCAG-TTATC--GGAGAG--TT-------AGACTGAGG............................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................GGAGAG--TT-------AGACTGAGGAC..........................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................CAATTCAG-TTATC--GGAGA.................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCTGCATCATCTGGTCTGTTCC................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................ACGATAAG-ATTTTGAGCATA--TT..........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ACAGACTCAGCTGACAATGACGATAAG-AT........................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGAG--TT-------AGACTGAGGACCGCAACA...................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CAGTCCTCTGCTGCTTCTCAAGAGCT.......................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................TGACGATAAG-ATTTTGAGCAT...............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAAG-ATTTTGAGCATA--TTAAT.......2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TATC--GGAGAG--TT-------AGACTGAG.............................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CCTCTGCTGCTTCTCAAGAGC........................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TCAGCTGACAATGACGATAAG-ATTTTGAG..................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TGACGATAAG-ATTTTGAGCATA--TTAA........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GTTCCAGTCCTCTGCTGCTTCTCAAG...........................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGAGGACCGCAACAGACTCAGCT..........................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGCTGCTTCTCAAGAGCTCCA------AAAAATT.......................................................................................................2811.001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GACAATGACGATAAG-ATTTTGA...................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGGTCTGTTCCAGTCCTCTGCTGCT..................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TCAATTCAG-TTATC--GGAGAG--TT-------AGAA.................................................................2611.001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTGGTCTGTTCCAGTCCTCTGC......................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGACGATAAG-ATTTTGAGCA................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGGTCTGTTCCAGTCCTCTGCT.....................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATC--GGAGAG--TT-------AGACTGA..............................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTCTGCTGCTTCTCAAGAGCTT......................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GACTCAGCTGACAATGACGG...............................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AG--TT-------AGACTGAGGACCGCAAC....................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................TCTGCTGCTTCTCAAGAGCT.......................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................CATCTGGTCTGTTCCAGTC............................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AG-TTATC--GGAGAG--TT-------AGA..................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................AG--TT-------AGACTGAGGACCGC.......................................................1811.001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ACAGACTCAGCTGACAATGACG................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TGGTCTGTTCCAGTCCTCTGCTGC...................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CTCTGCTGCTTCTCAAGAGCTC......................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................ATC--GGAGAG--TT-------AGACTGAGGA...........................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CGCAACAGACTCAGCTGACAATGACGA...............................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AG-TTATC--GGAGAG--TT-------AGACT................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................TTCCAGTCCTCTGCTGCTTCTCAAGAGCT.......................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................GAGGACCGCAACAGACTCAGCT..........................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TCAGCTGACAATGACGATAAG-AT........................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CCGCAACAGACTCAGCTGACAATGACGA...............................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AAAATTTCAATTCAG-TTATC--GGAGAG--T.............................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCTCTGCTGCTTCTCAAGAGCTCC.....................................................................................................................2511.001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GAGGACCGCAACAGACTC..............................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCTGCTTCTCAAGAGCTC......................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TTCTCAAGAGCTCCA------AAAAATTTCA....................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCCTCTGCTGCTTCTCAAGAGCTCCA------AAA...........................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TATC--GGAGAG--TT-------AGACTGA..............................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................GACGATAAG-ATTTTGAGCAT...............2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................AATTCAG-TTATC--GGAGAG--TT-------AGACTGA..............................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................CAACCATTACAATAATCTGCATCATCTGG........................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GACTCAGCTGACAATGACGATAAG-..........................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................ATGACGATAAG-ATTTTGAGCAT...............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................CCGCAACAGACTCAGCTGACA......................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................ACTCAGCTGACAATGACGATAAG-ATT.......................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................T-------AGACTGAGGACCGCAAC....................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................TGACAATGACGATAAG-AT........................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CCGCAACAGACTCAGCTGAC.......................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........A--ACATGCCAACCATTACAATAATC....................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTGTGTTCCAATCCTCCGCTGCTTCTCAAGAGCTCCC-------AAGATTTCAATTG-A-GTATC--GGGGAC--ATCTGAGGTCAACTGAGGACCGGAACAGACTCAGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................................................GACCGGAACAGACTCAGCT..........................................1912.0020000200
................................................................TGCTTCTCAAGAGCTCCC-------AAG..........................................................................................................2112.0022000000
...................................................................................................................GAC--ATCTGAGGTCAACTGAGG............................................................2112.0020000200
......................................................AATCCTCCGCTGCTTCTCAAGAGCTC......................................................................................................................2611.0010000100
...................................................................................................................GAC--ATCTGAGGTCAACTGAGGACCGGA......................................................2711.0010000100
...............................................................................................................................................................AATGACGATAAC-ATTTTGAGC.................2111.0010100000
.......................................................................CAAGAGCTCCC-------AAGATTTCAATTG-A-GT...........................................................................................2711.0010000100
...................................................TCCAATCCTCCGCTGCTTCT...............................................................................................................................2011.0011000000
....................................................CCAATCCTCCGCTGCTTCTCAAGAGCT.......................................................................................................................2711.0010000100
.........................................................................................................................................GACCGGAACAGACTCAGCTGACAATGAC.................................2811.0010100000
............................................................................................ATTTCAATTG-A-GTATC--GGG...................................................................................1911.0010000010
............................ATAATCTGCATTATCTGGTGT.....................................................................................................................................................2111.0010000100
..................................................................................................................................................................GACGATAAC-ATTTTGAGC.................1811.0010000010
................................................................................CC-------AAGATTTCAATTG-A-GTATC--GGG...................................................................................2411.0010000100
..............................................................................................................................GGTCAACTGAGGACCGGAAC....................................................2011.0011000000
.....................................................................................................................C--ATCTGAGGTCAACTGAG.............................................................1811.0011000000
....................................................................................................................AC--ATCTGAGGTCAACTGAGGA...........................................................2111.0010000010
........................................................................................................................ATCTGAGGTCAACTGAGGACCGGAA.....................................................2511.0011000000
.................................................................................C-------AAGATTTCAATTG-A-GTATC--GGG...................................................................................2311.0010000010
..............................................................................................................................GGTCAACTGAGGACCGGAACAGACTCA.............................................2711.0011000000
...................................................................................................................GAC--ATCTGAGGTCAACTGAG.............................................................2011.0011000000
......................................................................................................................................................TCAGCTGACAATGACGATAAC-A.........................2211.0011000000
........................................................................................................................................................................AAC-ATTTTGAGCATA--TTGATAAGGAC.2611.0010001000
droYak3
ATAATCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGTTGCTTCTCAAGAGCTTCA-------AAGATTTCGATAG-AGTTTTT--GGGGAC--TTCTGAGCTCAACTGGGGACCGGAACAGACTCAGCTGACAATGACGATAAT-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................GATTTCGATAG-AGTTTTT--GGGGAC--..............................................................................2414.00400100000003
.........................................................CCTCCGTTGCTTCTCAAGAGCTTCA-------AA...........................................................................................................2712.00200001010000
..................................................................................................................................................................GACGATAAT-ATTTTGAGCA................1912.00202000000000
...........................................................................................GATTTCGATAG-AGTTTTT--GGGGA.................................................................................2312.00200000020000
.........................................................................................................................................................................AT-ATTTTGAGCATA--TTGATAAGGAC.2511.00101000000000
............................................................................................ATTTCGATAG-AGTTTTT--GGGGAC--..............................................................................2311.00101000000000
........................................................................................................................TTCTGAGCTCAACTGGGGACCGG.......................................................2311.00101000000000
......................................................................................................................................................................ATAAT-ATTTTGAGCATA--TTG.........2011.00101000000000
...................................................................................................................................................GACTCAGCTGACAATGACG................................1911.00101000000000
...............................................................................................................................CTCAACTGGGGACCGGAACA...................................................2011.00101000000000
..........................................................................................................................................ACCGGAACAGACTCAGCTGACAAT....................................2411.00101000000000
............................................................................................................................GAGCTCAACTGGGGACCGGAACA...................................................2311.00101000000000
...................................................................................................................................................GACTCAGCTGACAATGAC.................................1811.00100010000000
.....CTAA--ACATGCCAACCATTACAAT........................................................................................................................................................................2311.00101000000000
........................................................................................................GTTTTT--GGGGAC--TTCTGAGCTCA...................................................................2311.00101000000000
...................................................................................................................................................GACTCAGCTGACAATGACGA...............................2011.00101000000000
.........................................TCTGGTCTGTTCCAGTCCTCCGTT.....................................................................................................................................2411.00101000000000
....................................................................................................AG-AGTTTTT--GGGGAC--TTCTGAGCTC....................................................................2511.00100000010000
.............................TAATCTGCATTATCTGGTCTGTT..................................................................................................................................................2311.00101000000000
...........................................................................................GATTTCGATAG-AGTTTTT--GGGGAC--TTCT..........................................................................2811.00101000000000
......................................................................................................................................................................ATAAT-ATTTTGAGCATA--TTGATAAGGAC.2811.00100000010000
.............................................................................................................................................GGAACAGACTCAGCTGACAATGACG................................2511.00101000000000
...................................................................................................................................................GACTCAGCTGACAATGACGATAAT-..........................2411.00100010000000
......................................TTATCTGGTCTGTTCCAGTC............................................................................................................................................2011.00101000000000
.......................................................................................................................................................................TAAT-ATTTTGAGCATA--TTGATAAGGAC.2711.00100000010000
...................................................................................................................GAC--TTCTGAGCTCAACTGGGGA...........................................................2211.00100010000000
........................................................................................................GTTTTT--GGGGAC--TTCTGAGCTC....................................................................2211.00100000010000
....................................................................................................................................CTGGGGACCGGAACAGACTC..............................................2011.00101000000000
............................................................................................................................................................GACAATGACGATAAT-ATTTTGAGC.................2411.00101000000000
............................................................................................................................................................GACAATGACGATAAT-ATTTTGA...................2211.00101000000000
.....................................................................................................................................TGGGGACCGGAACAGACTC..............................................1911.00100100000000
..............................................................................................................................................GAACAGACTCAGCTGACAATG...................................2111.00101000000000
.....................................................................................................................C--TTCTGAGCTCAACTGGGGA...........................................................2011.00100000010000
.................................................................................................................GGGAC--TTCTGAGCTCAACTGGG.............................................................2211.00101000000000
...ATCTAA--ACATGCCAACCATTACAAT........................................................................................................................................................................2511.00101000000000
droEug1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTAGTCTGTTACAGTCCTCCGCTGCTTCTCAAGAACTCCC-------GTGATTTGAATTA-AAGAATC--TAAGAT--TTCTAAGGACAACTGAGGACCGCAACAGGCTAAGTTGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droBia1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGATGCTTCTCAAGAACGACC------CACGATTTCGTTTCTG-TGATC--AGGGGCTGTTATGAGGACAACTGAGGACCGCAACAGGCTCAGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droTak1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCCGCTGCTTCTCAAGAACCTCT-------AAGATATCATTTCAA-TGATC--AGGGACGGTTGTGAGGACAACTGAGGACCGCAACAGGCTCAGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droEle1
ATATTCTTA--ACATGCCAACCATTACAATAATCTGCATTATCTGGCCTGTTGCAGCCCTCTGCTACTTCTCAAGAACTCCC-------AATTTTTCGCTTA-G-ATATC--GAGGGC--TTCTGAGGACAAGTGAGGGTCGCAACAGGCTCGGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droRho1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGCCTGTTCTGGTCCTCTGCTGATCCCCGAGAACCCCC-------AAGATATCCCTTG-G-ACATC--GAGGCA--TTTTGAGGACAACTGAGAACCGAGACAGGCTCGGTTGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droFic1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCAGTCCTCTGCTGTTTCTCCAGAACCGCC-------AAGATTTCGTTTA-G-TTATC--GAGTTC--TTCTGGGGACAACTGAGGATCGCAACAGGCTCGGTTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
droKik1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCTGGACTTGTAGA----------------------------------------------G-G-----------------------GTCCTTGGAGGTTTGAAACAGGCTCGTTTGACAATGACGATAACAATTTTGAGCA--------TAAGGACASizeHit CountTotal NormTotal
No Reads
droAna3
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCCAGTCTGTTTCGCTCCTCTGCTGTTCTTCTGA-GGTCCC------AAAAA--------------------AAGAA--TTCTATGGACAGCCGAGGACCGCAACAGGCTCGGCCGACAATGACGATAAA-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................ATCCAGTCTGTTTCGCTCCT..........................................................................................................................................2011.001010000
................................................TGTTTCGCTCCTCTGCTGTTC.................................................................................................................................2111.001100000
.......................................................CTCCTCTGCTGTTCTTCTGA-GGTCCC------..............................................................................................................2611.001100000
......................................TTATCCAGTCTGTTTCGCTCCTCTGC......................................................................................................................................2611.001010000
..ATTCTAA--ACATGCCAACCATT.............................................................................................................................................................................2111.001010000
.......................................TATCCAGTCTGTTTCGCTCCTCTGCT.....................................................................................................................................2611.001100000
......................................TTATCCAGTCTGTTTCGCT.............................................................................................................................................1911.001000001
...................................................TTCGCTCCTCTGCTGTTCTTCTGA-..........................................................................................................................2411.001100000
........................................ATCCAGTCTGTTTCGCTCCTCTGCT.....................................................................................................................................2511.001000001
.........................................................................................................................TCTATGGACAGCCGAGGACCGCAACAG..................................................2711.001100000
.....................................................................................................................A--TTCTATGGACAGCCGAGGAC..........................................................2111.001010000
...............................................................................................................................GACAGCCGAGGACCGCAACAGGCC...............................................2411.001010000
...........................................CAGTCTGTTTCGCTCCTCTG.......................................................................................................................................2011.001100000
........................................................................................................................TTCTATGGACAGCCGAGGAC..........................................................2011.001000100
................................................................................................................................ACAGCCGAGGACCGCAACAGGCTC..............................................2411.001010000
.....................................................................................................................................................................GATAAA-ATTTTGAGCATA--TTGATAAGGA..2811.001000001
........................................................................................................................TTCTATGGACAGCCGAGGACCG........................................................2211.001100000
..................................................................................................................................AGCCGAGGACCGCAACAGGCTC..............................................2211.001010000
.....................................ATTATCCAGTCTGTTTCGCTCCTCTGCT.....................................................................................................................................2811.001010000
.................................................GTTTCGCTCCTCTGCTGTTCTTCTG............................................................................................................................2511.001100000
droBip1
ATATTCTAA--ACATGCCAACCATTACAATAATCTGCATTATCCAGCCTGTTTCGCTCCTTTGCTGTCCTTCAAT-GCTCTG------AAA----------------------AAGGA--GTCTGAGGACAGCGGAGGACCGCAACAGGCTCGGCTGACAATGACGATAAC-ATTTTGAGCATA--TTGATAAGGACASizeHit CountTotal NormTotal
No Reads
dp5
-TATTCTAAAAACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCCGTCTTCAGGCGTT-CCCAAAAG-----AAAACTCGAGACTTTACTAA-A-CTCTTTTTTCGAT--TTCTTTTGGAAGCTAAAGACCGGCACAGACTCGTTTGACAATGACGATAACGATTTTGAGCATATTTTGATAAGGACASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................CTCGTTTGACAATGACGATAAC...........................2211.0010100000000
..................................................................................................................................AGCTAAAGACCGGCACAGACTCT.............................................2311.0010100000000
...................................................................................................................................................GACTCGTTTGACAATGACG................................1911.0010100000000
............................................................................................................................TTTGGAAGCTAAAGACCGGCACA...................................................2311.0010100000000
..................................................................TT-CCCAAAAG-----AAAACTCGAGACTTTAC...................................................................................................2711.0010010000000
.................................................................................................................................AAGCTAAAGACCGGCACA...................................................1811.0010100000000
droPer2
-TATTCTAAAAACATGCCAACCATTACAATAATCTGCATTATCTGGTCTGTTCCCGTCTTCAGCCGTT-CCCAAAAG-----AAAACTCGAGACTTTACTAA-A-CTCTT--TGCGAT--TTCTTTTGGAAGCTAAAGACCGGCACAGACTCGTTTGACAATGACGATAACGATTTTGAGCATATTTTGATAAGGACASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................ATTATCTGGTCTGTTCCCGTC............................................................................................................................................2113.003300000
..............................................................................................................................................................CAATGACGATAACGATTTTGAGC.................2312.002200000
............................................................................................................................................................GACAATGACGATAACGATTTTGAGC.................2511.001010000
..........................................................................................................................................ACCGGCACAGACTCGTTTGACAATGG..................................2611.001100000
........................................ATCTGGTCTGTTCCCGTCT...........................................................................................................................................1911.001100000
...................................................................................AAACTCGAGACTTTACTAA-A-CTCTT--TGC...................................................................................2811.001100000
...................................................................................................................................................GACTCGTTTGACAATGACGAT..............................2111.001010000
..........................................................................................................................................ACCGGCACAGACTCGTTTGACAAT....................................2411.001100000
............................................................................................................................TTTGGAAGCTAAAGACCGGCAC....................................................2211.001100000
.........................................................................................................................................GACCGGCACAGACTCGTTTGAC.......................................2211.001100000
..........................................................................................................................................ACCGGCACAGACTCGTTTGACAATGA..................................2611.001100000
..........................................................................................................................................ACCGGCACAGACTCGTTTGACA......................................2211.001010000
droWil2
GTGTTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
No Reads
droVir3
GAATT-------------AACAATAATAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAAC-GATTTCCGGATA--TTGATAATGATASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................ATTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAA............................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAC-GATTTCCGGATA--TTGAT.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................TTTCCGGATA--TTGATAATG...1911.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................AAC-GATTTCCGGATA--TTGATA......2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
droMoj3
GAATT-------------AACAATAACAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------AACGCAAACGATAAG-AATTTGCGCATA--TTGATAATGATASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................ATATGCATTAT------------------------------------------------------------------------------------------------------------------AACGCAAACGATAAG-AAT.......................2911.001100000
droGri2
ATGGAATCA--AC-----AACAATAACAATAATATGCATTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAAC-GATTTGCGCATAG-AAGTTAATGATASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................TTAT------------------------------------------------------------------------------------------------------------------GACAAAGACGATAAC-G.........................2011.00110

Generated: 10/20/2015 at 10:12 PM