ID:

dse-mir-9b

 Coordinate:

scaffold_7:345756-345844 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.5 -36.4

Flybase annnotation

intron [Dsec\GM17194-in]; pre_miRNA [Dsec\mir-9b-RM]; utr5 [utr5_plus_2211]; miRNA [Dsec\miR-9b-RA]

No Repeatable elements found

Sense Strand Reads

TATTACATTTATTGTTAAATTTGTTTAAACTTATATGTTGCTCTTTTGTTTGCATATTATTTGGTCTTTGGTGATTTTAGCTGTATGGTGTATAAGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTTCTGCATTATGCTTGAGTTGATTTTATTTGGTATAATTTACTTTTCTAGTGTTACT

*************************************************.((((.((((((((((.(((((((((...((((.(((((.(((....))).))))).))))..))))))))).))))))))))...)))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V113

male body		 V115

head
................................................................TCTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 0 1 77456.00 77456 23925 25963 14207 13361
................................................................TCTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 0 1 27306.00 27306 16122 6459 2576 2149
................................................................TCTTTGGTGATTTTAGCTGTATGG..................................................................................................... 24 0 1 2432.00 2432 1045 753 156 478
................................................................TCTTTGGTGATTTTAGCTGTA........................................................................................................ 21 0 1 1847.00 1847 1111 340 222 174
.................................................................CTTTGGTGATTTTAGCTGTATG...................................................................................................... 22 0 1 1829.00 1829 1767 30 19 13
.................................................................CTTTGGTGATTTTAGCTGTAT....................................................................................................... 21 0 1 1221.00 1221 1205 10 0 6
.......................................................................................................TAGAGCTTTATTACCAAAAACC................................................................ 22 0 1 931.00 931 472 163 179 117
................................................................TCTTTGGTGATTTTAGCTGTAA....................................................................................................... 22 1 1 783.00 783 268 421 49 45
................................................................TCTTTGGTGATTTTAGCTGTATGT..................................................................................................... 24 1 1 752.00 752 318 127 206 101
................................................................TCTTTGGTGATTTTAGCTGT......................................................................................................... 20 0 1 669.00 669 255 179 133 102
................................................................TCTTTGGTGATTTTAGCTGTATA...................................................................................................... 23 1 1 509.00 509 232 238 6 33
................................................................TCTTTGGTGATTTTAGCTGTATGA..................................................................................................... 24 1 1 391.00 391 152 102 95 42
................................................................TCTTTGGCGATTTTAGCTGTATG...................................................................................................... 23 1 1 298.00 298 208 34 37 19
..................................................................TTTGGTGATTTTAGCTGTATG...................................................................................................... 21 0 1 236.00 236 65 99 18 54
................................................................TCTTTGGTGATTTTAGCTTTATG...................................................................................................... 23 1 1 209.00 209 112 12 71 14
................................................................TCTTTGGTGATTTTAGCTGTATAA..................................................................................................... 24 2 1 194.00 194 53 128 2 11
................................................................TCTTTGGTGATTTTAGCTGTAAA...................................................................................................... 23 2 1 194.00 194 54 126 2 12
................................................................TCTTTGGTGATTTTAGCTG.......................................................................................................... 19 0 1 186.00 186 81 52 8 45
................................................................TCTTTGGTGATTTTAGCTGTATT...................................................................................................... 23 1 1 184.00 184 88 22 45 29
................................................................TCTTTGGCGATTTTAGCTGTAT....................................................................................................... 22 1 1 167.00 167 146 11 8 2
.................................................................TCTTGGTGATTTTAGCTGTATG...................................................................................................... 22 2 1 163.00 163 8 126 13 16
................................................................TCTTTGGTGATTTTAGCTATG........................................................................................................ 21 2 1 159.00 159 55 71 8 25
................................................................TCTTTGGTGATTTTAGCTGTATGGT.................................................................................................... 25 0 1 157.00 157 18 48 52 39
.................................................................CTTTGGTGATTTTAGCTGTATGG..................................................................................................... 23 0 1 149.00 149 101 24 10 14
................................................................TCTTTGGTGATTTTAGCTATATG...................................................................................................... 23 1 1 131.00 131 8 16 96 11
................................................................TCTTTGGTGATTTTAGCTGTATAAA.................................................................................................... 25 3 1 124.00 124 42 70 0 12
................................................................TCCTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 116.00 116 8 81 14 13
................................................................TTTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 111.00 111 23 81 3 4
................................................................TCTTTGGTGATTTTAGCTCTATG...................................................................................................... 23 1 1 110.00 110 3 12 88 7
.......................................................................................................TAGAGCTTTATTACCAAAAAC................................................................. 21 0 1 105.00 105 40 25 25 15
................................................................TCTTTGTTGATTTTAGCTGTATG...................................................................................................... 23 1 1 104.00 104 71 18 6 9
................................................................TCTTTGGTGATTTTAGCTTTAT....................................................................................................... 22 1 1 92.00 92 67 5 18 2
................................................................TCTTTGGTGATTTTAGCTGTGTG...................................................................................................... 23 1 1 89.00 89 49 22 5 13
..................................................................TTTGGTGATTTTAGCTGTAT....................................................................................................... 20 0 1 88.00 88 54 22 2 10
.................................................................CTTTGGTGATTTTAGCTGTA........................................................................................................ 20 0 1 86.00 86 85 0 1 0
................................................................CCTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 86.00 86 32 30 13 11
................................................................TCTTCGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 78.00 78 29 27 12 10
................................................................TCTTTGGTGATTTTAGCTGCATG...................................................................................................... 23 1 1 77.00 77 16 24 23 14
................................................................TCTTTCGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 76.00 76 52 11 7 6
................................................................TCTTTGGGGATTTTAGCTGTATG...................................................................................................... 23 1 1 75.00 75 51 7 16 1
................................................................TCTTTGGTGATTTTATCTGTATG...................................................................................................... 23 1 1 74.00 74 42 9 10 13
................................................................TCTTTGGAGATTTTAGCTGTATG...................................................................................................... 23 1 1 72.00 72 38 4 12 18
................................................................TCTTTTGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 71.00 71 28 15 17 11
................................................................TCTTTGGTGATTTTAGCTGTATGC..................................................................................................... 24 1 1 65.00 65 25 27 5 8
................................................................TCTTTGGTGATTTTAGCTGGATG...................................................................................................... 23 1 1 61.00 61 56 2 2 1
................................................................ACTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 61.00 61 46 8 1 6
................................................................TCTTTGGTGGTTTTAGCTGTATG...................................................................................................... 23 1 1 59.00 59 5 28 12 14
...............................................................CTCTTTGGTGATTTTAGCTGTATG...................................................................................................... 24 1 1 58.00 58 18 23 1 16
................................................................TCTTTGGTGATTTTACCTGTATG...................................................................................................... 23 1 1 57.00 57 21 24 7 5
................................................................TCTTTGGTGATCTTAGCTGTATG...................................................................................................... 23 1 1 57.00 57 10 24 17 6
................................................................TCTTTGGTGATTTTAGCTGTACG...................................................................................................... 23 1 1 57.00 57 18 19 10 10
................................................................TCTTTGGTGATTTTAGCTGTGT....................................................................................................... 22 1 1 56.00 56 48 5 2 1
................................................................TCTTTGGTGATTTTAGCCGTATG...................................................................................................... 23 1 1 56.00 56 10 24 12 10
................................................................TCTTTGGTGATTTTAGTTGTATG...................................................................................................... 23 1 1 55.00 55 4 40 7 4
................................................................TCTTTGGTGATTTTGGCTGTATG...................................................................................................... 23 1 1 52.00 52 7 23 15 7
................................................................TCTTTGGTGATTTTCGCTGTATG...................................................................................................... 23 1 1 52.00 52 0 25 18 9
................................................................TCTTTAGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 52.00 52 24 12 5 11
................................................................TCTTTGGTGATTTTAGCTGTATGGA.................................................................................................... 25 1 1 50.00 50 3 11 21 15
................................................................TCTTTGTTGATTTTAGCTGTAT....................................................................................................... 22 1 1 50.00 50 38 7 1 4
................................................................TCTTTGGTGACTTTAGCTGTATG...................................................................................................... 23 1 1 50.00 50 16 19 11 4
................................................................TCTTTGGTGATTTTAGCTAT......................................................................................................... 20 1 1 47.00 47 28 9 5 5
................................................................TCTTTGGTGATTCTAGCTGTATG...................................................................................................... 23 1 1 46.00 46 1 26 8 11
................................................................TCTTTGCTGATTTTAGCTGTATG...................................................................................................... 23 1 1 46.00 46 23 8 9 6
................................................................TCTCTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 46.00 46 11 12 15 8
..................................................................TCTTGTGATTTTAGCTGTATG...................................................................................................... 21 2 1 44.00 44 26 8 6 4
................................................................TCTTTGGTGATTTCAGCTGTATG...................................................................................................... 23 1 1 43.00 43 14 15 13 1
.................................................................TCTTGGTGATTTTAGCTGTAT....................................................................................................... 21 2 1 43.00 43 9 29 4 1
................................................................TTTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 42.00 42 21 17 4 0
................................................................TCTTTGGTGATATTAGCTGTATG...................................................................................................... 23 1 1 41.00 41 7 29 2 3
................................................................TCTTTGGTGATTTTAGCTGTATGTT.................................................................................................... 25 1 1 41.00 41 5 2 26 8
................................................................TCTTTGGTGATTTTTGCTGTATG...................................................................................................... 23 1 1 41.00 41 17 17 6 1
................................................................TCTTTGGTGATTTTAGCTGTATC...................................................................................................... 23 1 1 41.00 41 16 8 7 10
................................................................TCTTTGGTGCTTTTAGCTGTATG...................................................................................................... 23 1 1 40.00 40 1 21 10 8
................................................................TCTTTGGGGATTTTAGCTGTAT....................................................................................................... 22 1 1 40.00 40 35 1 3 1
................................................................GCTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 38.00 38 25 7 0 6
................................................................TCTTTGGTAATTTTAGCTGTATG...................................................................................................... 23 1 1 37.00 37 18 12 3 4
................................................................TCTTTGGTGATTTTAGCTGGAT....................................................................................................... 22 1 1 37.00 37 36 0 0 1
................................................................TCTTTGGTGATTTTACCTGTAT....................................................................................................... 22 1 1 36.00 36 24 10 0 2
................................................................TCTTTGGTTATTTTAGCTGTATG...................................................................................................... 23 1 1 36.00 36 6 11 8 11
................................................................TCTTTCGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 35.00 35 31 1 1 2
.................................................................CTTTGGTGATTTTAGCTGTATGT..................................................................................................... 23 1 1 33.00 33 32 0 0 1
................................................................TCTTTGGTGATTTTAGCTCTAT....................................................................................................... 22 1 1 33.00 33 3 2 24 4
.................................................................TCTTTGTGATTTTAGCTGTATG...................................................................................................... 22 3 2 31.00 62 42 10 6 4
........................................................................................................AGAGCTTTATTACCAAAAACC................................................................ 21 0 1 31.00 31 30 1 0 0
................................................................TGTTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 31.00 31 30 1 0 0
.......................................................................................................TAGAGCTTTATTACCAAAAACCA............................................................... 23 0 1 31.00 31 18 13 0 0
................................................................TCTTTTGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 30.00 30 19 9 0 2
................................................................TCCTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 30.00 30 8 14 6 2
................................................................TCTTTGGTGATTTTAGCTATAT....................................................................................................... 22 1 1 29.00 29 13 3 12 1
................................................................TCTTTGGTGATTTTAGCTGAATG...................................................................................................... 23 1 1 27.00 27 4 3 2 18
................................................................TCTTTGGTGATTTTAGTTGTAT....................................................................................................... 22 1 1 27.00 27 3 20 0 4
................................................................TCTTTGATGATTTTAGCTGTATG...................................................................................................... 23 1 1 26.00 26 6 9 1 10
................................................................TCTTTGGTGATTTTAGATGTATG...................................................................................................... 23 1 1 26.00 26 1 7 8 10
................................................................TCTTCGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 26.00 26 16 5 2 3
................................................................TCTTTGGTGATTTTAGCTGTATGAA.................................................................................................... 25 2 1 26.00 26 12 9 2 3
................................................................TCTTTGGTGATTTTAGCTGTAC....................................................................................................... 22 1 1 26.00 26 10 10 2 4
................................................................TCTTTGGTGATTTTAGCTGTT........................................................................................................ 21 1 1 26.00 26 13 1 6 6
................................................................TCTTTAGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 25.00 25 17 3 2 3
................................................................TATTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 25.00 25 1 5 4 15
................................................................TCTTTGGAGATTTTAGCTGTAT....................................................................................................... 22 1 1 24.00 24 19 0 0 5
................................................................TCTTTGGTGAATTTAGCTGTATG...................................................................................................... 23 1 1 24.00 24 1 16 2 5
................................................................TCTTTGGTGATTTTATCTGTAT....................................................................................................... 22 1 1 24.00 24 21 2 1 0
................................................................TCTTTGGTGATTTTTGCTGTAT....................................................................................................... 22 1 1 24.00 24 17 7 0 0
................................................................TCGTTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 24.00 24 18 2 2 2
.................................................................CTTTGGTGATTTTAGCTGT......................................................................................................... 19 0 1 24.00 24 24 0 0 0
................................................................TCTTTGGTGATTTTAACTGTATG...................................................................................................... 23 1 1 24.00 24 6 14 3 1
................................................................ACTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 23.00 23 20 1 0 2
..................................................................TCTTGTGATTTTAGCTGTAT....................................................................................................... 20 2 1 23.00 23 19 4 0 0
................................................................CCTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 23.00 23 15 6 2 0
................................................................TCTTTGGTGATTTTAGCAGTATG...................................................................................................... 23 1 1 23.00 23 4 12 2 5
................................................................TCTTTGGTGATTTTAGCTGTAAG...................................................................................................... 23 1 1 22.00 22 8 6 1 7
................................................................TCTTTGGTCATTTTAGCTGTATG...................................................................................................... 23 1 1 22.00 22 5 5 5 7
.................................................................CTTTGGTGATTTTAGCTGTATA...................................................................................................... 22 1 1 21.00 21 20 1 0 0
.................................................................TTTTGGTGATTTTAGCTGTATG...................................................................................................... 22 1 1 20.00 20 8 10 1 1
................................................................TCTTTGCTGATTTTAGCTGTAT....................................................................................................... 22 1 1 20.00 20 12 3 3 2
................................................................TCGTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 20.00 20 20 0 0 0
................................................................TCTATGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 19.00 19 7 6 2 4
................................................................TCTTTGGTGATCTTAGCTGTAT....................................................................................................... 22 1 1 19.00 19 8 7 4 0
...................................................................TTGGTGATTTTAGCTGTATG...................................................................................................... 20 0 1 19.00 19 11 6 1 1
................................................................TCTTTGGTGATTTTAGCTGTCTG...................................................................................................... 23 1 1 18.00 18 1 5 7 5
................................................................TCTTTGGTGATTTTAGCTGCAT....................................................................................................... 22 1 1 18.00 18 8 4 2 4
................................................................TCTTTGGTGATTTTAGCTGTTTG...................................................................................................... 23 1 1 17.00 17 1 12 2 2
................................................................TCTTTGGTGACTTTAGCTGTAT....................................................................................................... 22 1 1 17.00 17 8 7 2 0
...............................................................CTCTTTGGTGATTTTAGCTGTAT....................................................................................................... 23 1 1 17.00 17 6 9 0 2
.......................................................................................................TAGAGCTTTATTACCAAAAA.................................................................. 20 0 1 17.00 17 5 4 6 2
................................................................TCTTTGGTGATGTTAGCTGTATG...................................................................................................... 23 1 1 16.00 16 15 1 0 0
................................................................TCTTTGGTGATTTTAGCTGTAG....................................................................................................... 22 1 1 16.00 16 6 5 1 4
................................................................TCTTTGGTGGTTTTAGCTGTAT....................................................................................................... 22 1 1 16.00 16 7 5 3 1
................................................................TCTTTGGTGATTTTAGCTGTATGTA.................................................................................................... 25 2 1 16.00 16 3 8 4 1
................................................................TCTTTGGTGATTTTAGCCGTAT....................................................................................................... 22 1 1 16.00 16 5 7 2 2
.................................................................CTTTGGTGATTTTAGCTGTAA....................................................................................................... 21 1 1 16.00 16 16 0 0 0
................................................................TCTTTGGTGATGTTAGCTGTAT....................................................................................................... 22 1 1 15.00 15 15 0 0 0
................................................................TCTCTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 15.00 15 10 1 2 2
................................................................TGTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 15.00 15 13 0 1 1
................................................................TCTTTGGTGATTTTAGCT........................................................................................................... 18 0 1 15.00 15 6 7 0 2
................................................................GCTTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 15.00 15 14 1 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGAAA................................................................................................... 26 3 1 15.00 15 3 8 3 1
................................................................TCTTTGGTGATATTAGCTGTAT....................................................................................................... 22 1 1 15.00 15 7 7 1 0
................................................................TCTTTGGTGATTTGAGCTGTATG...................................................................................................... 23 1 1 14.00 14 11 3 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGGTGT.................................................................................................. 27 0 1 14.00 14 2 4 8 0
................................................................TCTTTGGTGATTTAAGCTGTATG...................................................................................................... 23 1 1 14.00 14 4 10 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGTAA................................................................................................... 26 3 1 14.00 14 1 11 2 0
................................................................TCTTTGGTGATTTTAGCTGTAAAA..................................................................................................... 24 3 1 14.00 14 6 8 0 0
................................................................TCTTTGGTGATTCTAGCTGTAT....................................................................................................... 22 1 1 14.00 14 4 8 1 1
................................................................TCATTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 13.00 13 1 6 3 3
................................................................TCTTTGGTGATTTTGGCTGTAT....................................................................................................... 22 1 1 13.00 13 8 3 2 0
................................................................TCTTTGGTGATTATAGCTGTATG...................................................................................................... 23 1 1 13.00 13 1 9 2 1
................................................................TCTTTGGTGCTTTTAGCTGTAT....................................................................................................... 22 1 1 12.00 12 1 5 4 2
...................................................................TTGGTGATTTTAGCTGTAT....................................................................................................... 19 0 1 11.00 11 8 1 1 1
................................................................TCTTAGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 11.00 11 1 0 2 8
................................................................TCTTTGGTGATTTTAGCTTTA........................................................................................................ 21 1 1 11.00 11 10 0 1 0
.......................................................................................................TAGAGCTTTATTACCAAAA................................................................... 19 0 1 11.00 11 3 5 0 3
................................................................TCTTTGGTGATTTTAGCTGAAT....................................................................................................... 22 1 1 11.00 11 9 0 1 1
.................................................................CTTTGGTGATTTTAGCTGTAGG...................................................................................................... 22 1 1 11.00 11 11 0 0 0
.................................................................CTTTGGAGATTTTAGCTGTATG...................................................................................................... 22 1 1 11.00 11 11 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTG........................................................................................................ 21 1 1 11.00 11 10 1 0 0
................................................................TCTTTGGTGATTGTAGCTGTATG...................................................................................................... 23 1 1 11.00 11 10 0 1 0
................................................................TCTTTGGTGATTTTAACTGTAT....................................................................................................... 22 1 1 11.00 11 6 4 1 0
...............................................................ATCTTTGGTGATTTTAGCTGTAT....................................................................................................... 23 1 1 10.00 10 10 0 0 0
.................................................................CTTTGGTGCTTTTAGCTGTATG...................................................................................................... 22 1 1 10.00 10 10 0 0 0
.................................................................CTTTGGCGATTTTAGCTGTAT....................................................................................................... 21 1 1 10.00 10 10 0 0 0
...............................................................TTCTTTGGTGATTTTAGCTGTATG...................................................................................................... 24 1 1 10.00 10 10 0 0 0
................................................................TCTTTGGTGTTTTTAGCTGTATG...................................................................................................... 23 1 1 10.00 10 4 4 0 2
................................................................TCTATGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 9.00 9 9 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTATTT..................................................................................................... 24 2 1 9.00 9 4 0 4 1
................................................................TCTTTGGTAATTTTAGCTGTAT....................................................................................................... 22 1 1 9.00 9 9 0 0 0
................................................................TCTTTGGTGATTTCAGCTGTAT....................................................................................................... 22 1 1 9.00 9 4 3 2 0
................................................................TCTTTGGTTATTTTAGCTGTAT....................................................................................................... 22 1 1 8.00 8 5 1 1 1
................................................................TCTTTGGTGATTTTAGCTGTATGGTT................................................................................................... 26 1 1 8.00 8 0 1 7 0
................................................................TCTTTGGCGATTTTAGCTGTA........................................................................................................ 21 1 1 8.00 8 8 0 0 0
.................................................................CTTTGGTGCTTTTAGCTGTAT....................................................................................................... 21 1 1 8.00 8 8 0 0 0
.................................................................CTTTGGTGATTTTAGCTGGATG...................................................................................................... 22 1 1 8.00 8 7 0 1 0
.....................................................................GGTGATTTTAGCTGTATG...................................................................................................... 18 0 1 8.00 8 4 3 0 1
..................................................................TTTGGTGATTTTAGCTGTATGG..................................................................................................... 22 0 1 8.00 8 4 2 0 2
.................................................................TCTTGGTGATTTTAGCTGTATGG..................................................................................................... 23 2 1 8.00 8 1 6 0 1
...............................................................GTCTTTGGTGATTTTAGCTGTATG...................................................................................................... 24 0 1 8.00 8 8 0 0 0
.................................................................CTTTGGTGATTTTAGCTGTATGA..................................................................................................... 23 1 1 8.00 8 8 0 0 0
................................................................TCTTTGGTGATTTTCGCTGTAT....................................................................................................... 22 1 1 8.00 8 0 6 1 1
................................................................TCTTTGGTGATTTTAGCTGTATAG..................................................................................................... 24 1 1 8.00 8 3 2 1 2
................................................................TCTTTGGTGATTTTAGCGGTATG...................................................................................................... 23 1 1 7.00 7 2 3 1 1
...............................................................ATCTTTGGTGATTTTAGCTGTATG...................................................................................................... 24 1 1 7.00 7 6 0 1 0
................................................................TCTTTGATGATTTTAGCTGTAT....................................................................................................... 22 1 1 7.00 7 5 0 0 2
................................................................TCTTTCTTGATTTTAGCTGTATG...................................................................................................... 23 2 1 7.00 7 5 2 0 0
...............................................................GTCTTTGGTGATTTTAGCTGTAT....................................................................................................... 23 0 1 7.00 7 7 0 0 0
...............................................................TTCTTTGGTGATTTTAGCTGTAT....................................................................................................... 23 1 1 7.00 7 7 0 0 0
................................................................TCTTTGGTGAATTTAGCTGTAT....................................................................................................... 22 1 1 7.00 7 4 3 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGGC.................................................................................................... 25 1 1 7.00 7 5 2 0 0
......................................................................................................ATAGAGCTTTATTACCAAAAAC................................................................. 22 0 1 7.00 7 4 2 1 0
................................................................TCTTTGGTCATTTTAGCTGTAT....................................................................................................... 22 1 1 7.00 7 0 1 1 5
.................................................................CTTTGGTGATTTTAGCTATG........................................................................................................ 20 2 1 7.00 7 7 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTAGG...................................................................................................... 23 1 1 7.00 7 3 1 2 1
................................................................TCTTTGGTGATTTTAGCTTTAA....................................................................................................... 22 2 1 7.00 7 6 1 0 0
.................................................................CTTTGGAGATTTTAGCTGTAT....................................................................................................... 21 1 1 7.00 7 7 0 0 0
................................................................TCTTTTTTGATTTTAGCTGTATG...................................................................................................... 23 2 1 7.00 7 6 1 0 0
.......................................................................................................TAGAGCTTTATTACCAAAAACT................................................................ 22 1 1 6.00 6 2 2 1 1
................................................................TCTTTGGCGATTTTAGCTGTATGG..................................................................................................... 24 1 1 6.00 6 6 0 0 0
......................................................................................................ATAGAGCTTTATTACCAAAAACC................................................................ 23 0 1 6.00 6 3 3 0 0
................................................................TCTTTTTTGATTTTAGCTGTAT....................................................................................................... 22 2 1 6.00 6 6 0 0 0
................................................................TCTTTGGTGATTTGAGCTGTAT....................................................................................................... 22 1 1 6.00 6 6 0 0 0
................................................................TATTTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 6.00 6 0 2 1 3
................................................................TTTTTGGTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 6.00 6 0 6 0 0
..................................................................TCTGGTGATTTTAGCTGTATG...................................................................................................... 21 1 1 6.00 6 1 4 1 0
.........................................................................................................GAGCTTTATTACCAAAAACC................................................................ 20 0 1 6.00 6 6 0 0 0
................................................................TCTTTGGTGATTTTAGCTGGA........................................................................................................ 21 1 1 6.00 6 5 0 0 1
....................................................................TGGTGATTTTAGCTGTAT....................................................................................................... 18 0 1 6.00 6 3 3 0 0
....................................................................TGGTGATTTTAGCTGTATG...................................................................................................... 19 0 1 6.00 6 4 1 1 0
.................................................................TTTTGGTGATTTTAGCTGTAT....................................................................................................... 21 1 1 6.00 6 3 3 0 0
.................................................................CTTTGGGGATTTTAGCTGTAT....................................................................................................... 21 1 1 5.00 5 5 0 0 0
.......................................................................................................TAGAGCTTTATTATCAAAAACC................................................................ 22 1 1 5.00 5 0 5 0 0
................................................................TCTTTGGTGATTTTACCTGTATGG..................................................................................................... 24 1 1 5.00 5 2 3 0 0
................................................................TCTTTGGAGATTTTAGCTGTATGG..................................................................................................... 24 1 1 5.00 5 4 1 0 0
.......................................................................................................TAGAGCTTTATTACCAAAAACA................................................................ 22 1 1 5.00 5 3 2 0 0
................................................................TCTTTGGTGATTGTAGCTGTAT....................................................................................................... 22 1 1 5.00 5 4 1 0 0
.................................................................CTTTGGTGATTTTATCTGTATG...................................................................................................... 22 1 1 5.00 5 4 1 0 0
................................................................TCTTTGGTGATTTTAGCTGA......................................................................................................... 20 1 1 5.00 5 2 1 1 1
................................................................TCTTTGTTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 5.00 5 4 0 0 1
.................................................................CTTTGGTGATTTTAGCTGTAG....................................................................................................... 21 1 1 5.00 5 5 0 0 0
.................................................................CTTTGGGGATTTTAGCTGTATG...................................................................................................... 22 1 1 5.00 5 4 0 1 0
................................................................TCTTTGGTGATTTAAGCTGTAT....................................................................................................... 22 1 1 5.00 5 3 2 0 0
.................................................................CTTTGTTGATTTTAGCTGTATG...................................................................................................... 22 1 1 5.00 5 5 0 0 0
.................................................................TCTTTGTGATTTTAGCTGTAT....................................................................................................... 21 3 9 5.00 45 37 8 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGGAA................................................................................................... 26 2 1 5.00 5 2 2 1 0
................................................................TCTTGGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 5.00 5 2 1 0 2
................................................................TCTTTGGTGATTTTATCTGTA........................................................................................................ 21 1 1 5.00 5 4 1 0 0
................................................................TCTTTGGTGATTTTAGCTGTTT....................................................................................................... 22 1 1 5.00 5 3 1 0 1
................................................................TCTTTGGTGTTTTTAGCTGTAT....................................................................................................... 22 1 1 5.00 5 4 1 0 0
...................................................................TCTTTGATTTTAGCTGTATG...................................................................................................... 20 3 19 4.79 91 53 21 11 6
.......................................................................................................TAGAGCTTTATTACCAAAACC................................................................. 21 1 1 4.00 4 1 3 0 0
................................................................TCTTTGGTGATTTTAGCTCTA........................................................................................................ 21 1 1 4.00 4 0 0 4 0
................................................................TCTTTGGTGATTTTACCTGTA........................................................................................................ 21 1 1 4.00 4 3 1 0 0
................................................................TTTTTGGTGATTTTAGCTGT......................................................................................................... 20 1 1 4.00 4 1 3 0 0
................................................................TCTTGGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 4.00 4 1 0 1 2
..................................................................TTTGGTGATTTTAGCTGTA........................................................................................................ 19 0 1 4.00 4 2 1 0 1
................................................................TCTTTGGTGATTTTATCTGTATGG..................................................................................................... 24 1 1 4.00 4 4 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTATTA..................................................................................................... 24 2 1 4.00 4 2 1 0 1
.................................................................CTTTGGTGAGTTTAGCTGTAT....................................................................................................... 21 1 1 4.00 4 4 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTAAT...................................................................................................... 23 2 1 4.00 4 1 1 1 1
................................................................TCTTTGGTTATTTTAGCTGTATGG..................................................................................................... 24 1 1 4.00 4 1 2 0 1
.................................................................CTTTGGTGATTTTATCTGTAT....................................................................................................... 21 1 1 4.00 4 4 0 0 0
.................................................................CTTTGGTGATTTTAGCTGTATT...................................................................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................CTTTGTTGATTTTAGCTGTAT....................................................................................................... 21 1 1 4.00 4 4 0 0 0
.................................................................CTTTGGTGATTTTAGCTGTATAA..................................................................................................... 23 2 1 4.00 4 4 0 0 0
................................................................TCGTTGGTGATTTTAGCTGTGT....................................................................................................... 22 2 1 4.00 4 4 0 0 0
................................................................TCTTTGGTGATTTTAGCTTTATGG..................................................................................................... 24 1 1 4.00 4 3 1 0 0
................................................................TCATTGGTGATTTTAGCTGTAT....................................................................................................... 22 1 1 4.00 4 2 0 0 2
................................................................TCTTTGGCGATTTTAGCTGTATGT..................................................................................................... 24 2 1 4.00 4 3 1 0 0
..................................................................CTTTGTGATTTTAGCTGTATG...................................................................................................... 21 2 1 4.00 4 4 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTATAT..................................................................................................... 24 2 1 4.00 4 0 1 2 1
................................................................TCTTTGGCGATTTTAGCTGTAA....................................................................................................... 22 2 1 4.00 4 4 0 0 0
............................................TTTGTTTGCATATTATTTGG............................................................................................................................. 20 0 1 4.00 4 4 0 0 0
.................................................................CTGTGGTGATTTTAGCTGTATG...................................................................................................... 22 1 1 4.00 4 4 0 0 0
................................................................TCTTTGGTCATTTTAGCTGTATGG..................................................................................................... 24 1 1 4.00 4 2 0 1 1
................................................................TCTTTGCTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 4.00 4 1 3 0 0
.................................................................CTTTCGTGATTTTAGCTGTATG...................................................................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................CTTTGCTGATTTTAGCTGTATG...................................................................................................... 22 1 1 4.00 4 4 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGGTA................................................................................................... 26 1 1 4.00 4 0 3 1 0
................................................................TCTGTGGTGATTTTAGCTGTATG...................................................................................................... 23 1 1 4.00 4 2 1 1 0
.......................................................................................................TAGAGCTTTATTACCAAAAAA................................................................. 21 1 1 4.00 4 1 1 1 1
................................................................TCTTTGGTGATTTTAGCTGTATGGTC................................................................................................... 26 1 1 4.00 4 0 4 0 0
................................................................TCTTTGGTGATTTTAGCTTTATGT..................................................................................................... 24 2 1 4.00 4 0 1 3 0
.................................................................CGTTGGTGATTTTAGCTGTATG...................................................................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................CTTTGGTGATTTTAGCTGGAT....................................................................................................... 21 1 1 4.00 4 4 0 0 0
................................................................TCTTTAGTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 4.00 4 1 2 0 1
................................................................TCTTTGGTGATTTTAGCTTAT........................................................................................................ 21 3 13 3.46 45 36 6 1 2
................................................................TCTTTGGTGATTTTAGCCGTATAA..................................................................................................... 24 3 1 3.00 3 0 3 0 0
................................................................TCTTTGGGGATTTTAGCTGT......................................................................................................... 20 1 1 3.00 3 2 0 1 0
................................................................TCTTTGGGGATTTTAGCTGTA........................................................................................................ 21 1 1 3.00 3 2 0 1 0
.......................................................................................................TAGAGCTTTATTACCAAACC.................................................................. 20 2 1 3.00 3 1 1 1 0
................................................................TCTTTGGTGATTTTAGCTGTCT....................................................................................................... 22 1 1 3.00 3 0 3 0 0
................................................................TCTTTGGTGATTTTAGCTGAATGG..................................................................................................... 24 1 1 3.00 3 0 1 1 1
.......................................................................................................TAGAGCTTTATTACCAACAACC................................................................ 22 1 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTAGCCGTATGG..................................................................................................... 24 1 1 3.00 3 0 1 0 2
................................................................TCTTTGGTGATTTTAGCTGTGTGA..................................................................................................... 24 2 1 3.00 3 3 0 0 0
.................................................................CTTTGGTGATTTTAGCGGTATG...................................................................................................... 22 1 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTGTGG..................................................................................................... 24 1 1 3.00 3 3 0 0 0
................................................................TCTTTCGTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 3.00 3 1 2 0 0
................................................................TCTTTGGTGATTATAGCTGTAT....................................................................................................... 22 1 1 3.00 3 0 1 1 1
................................................................TCTTCGGTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 3.00 3 2 0 0 1
................................................................TCTTTGGCGATTTTAGCTGTAAA...................................................................................................... 23 3 1 3.00 3 2 1 0 0
................................................................TCTTTGGTGATTTTAGCTGTATAAC.................................................................................................... 25 3 1 3.00 3 1 2 0 0
................................................................TCTTTGGTGATTTTAGCTTTAG....................................................................................................... 22 2 2 3.00 6 1 3 2 0
................................................................TCTTTGGTAATTTTAGCTGTATGG..................................................................................................... 24 1 1 3.00 3 2 1 0 0
.................................................................CTTTGGTGATTTTAGCTGTAAA...................................................................................................... 22 2 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTAGCTGTATGTTT................................................................................................... 26 2 1 3.00 3 0 0 2 1
................................................................TCTTTGGTGATTTTAGCTGTATGAT.................................................................................................... 25 1 1 3.00 3 1 0 0 2
................................................................TCTTTGGTGATTTTAGTTGTATGG..................................................................................................... 24 1 1 3.00 3 1 2 0 0
................................................................TCTTCGGTGATTTTAGCTGTA........................................................................................................ 21 1 1 3.00 3 2 1 0 0
................................................................TCTTTGGTGATTTTAGCTCTATGG..................................................................................................... 24 1 1 3.00 3 0 0 2 1
................................................................TCTTTGGTGATTTTAGCTGAA........................................................................................................ 21 1 1 3.00 3 2 0 0 1
................................................................TCTTTGGGGATTTTAGCTGTATGG..................................................................................................... 24 1 1 3.00 3 3 0 0 0
.................................................................CTTTCGTGATTTTAGCTGTAT....................................................................................................... 21 1 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTTGCTGTA........................................................................................................ 21 1 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTAGCTATGT....................................................................................................... 22 2 1 3.00 3 3 0 0 0
................................................................CCTTTGGTGATTTTAGCTGTATGG..................................................................................................... 24 1 1 3.00 3 2 0 0 1
.................................................................CTTTGGTGATTTTAGCTG.......................................................................................................... 18 0 1 3.00 3 3 0 0 0
.................................................................CGTTGGTGATTTTAGCTGTAT....................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TCTTGGTGATTTTAGCTGTA........................................................................................................ 20 2 1 3.00 3 1 2 0 0
.................................................................CTTTGGTGATTTTAGCCGTATG...................................................................................................... 22 1 1 3.00 3 3 0 0 0
................................................................TCTTTGGTGATTTTAACTGTATGG..................................................................................................... 24 1 1 3.00 3 1 2 0 0
................................................................TCTTTGGTGATTTTAGCTATATGG..................................................................................................... 24 1 1 3.00 3 0 1 1 1
................................................................TCTTTGGCGATTTTAGCTGT......................................................................................................... 20 1 1 3.00 3 3 0 0 0

Anti-sense strand reads

ATAATGTAAATAACAATTTAAACAAATTTGAATATACAACGAGAAAACAAACGTATAATAAACCAGAAACCACTAAAATCGACATACCACATATTCATAAGGTATCTCGAAATAATGGTTTTTGGTTTACCAAAGACGTAATACGAACTCAACTAAAATAAACCATATTAAATGAAAAGATCACAATGA

*************************************************.((((.((((((((((.(((((((((...((((.(((((.(((....))).))))).))))..))))))))).))))))))))...)))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_7:345706-345894 + dse-mir-9b Known_mirbase TATTACAT-------TTATTG----------------------TTAAATTTGTTTA---AACTTATATGTTGCTC-------------TTT--T-GTTTGCATATTATTTGGTCTTTGGTGATTTTAGCTGTATGGTG-TATA---AGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------AAT-----TT-----------------------ACTTTTCTAGTG------------TTACT
droSim2 2l:16265516-16265704 + dsi_276 confident TATTACAT-------TTATTG----------------------TTAAATTTGTTTA---AACTTATATGTTTCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TATA---AGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------AAT-----TT-----------------------ACTTTTCTAGCG------------TTAAT
dm3 chr2L:16698695-16698884 + dme-mir-9b Known_mirbase TATTACAA-------TTATTC----------------------TTAAATTTG----TTTAACTTATATGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TTTA-TGTATATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GTTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------TCT-----TT-----------------------ACTTTTCTCGCG------------TTACT
droEre2 scaffold_4845:19768341-19768529 + der-mir-9b Known_mirbase AATTACAC-------TAATTG----------------------TTTTATTTG----TTTAACTTATCAGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTA---TGTGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTT--------T-----TTCGTTT--T----GT-----T----------------------ACATTTTTCTAACG------------TTACT
droYak3 2R:4404200-4404379 - dya-mir-9b Known_mirbase TATTTCAT-------TAATTT----------------------TTATATTTG----TTTAACTTATCGGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTT-TATGTGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTT--------T-----TT-----------------C---A------------------------TTTTCTAACT------------TTATT
droEug1 scf7180000408961:272617-272785 + TAAAAAAA------------G----------------------TTA---TTA----ATTTACTTTTAAGTTGCCT-------------TTT--T-GTTTGCATATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTTGTTTT---TAATATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCGTT-AT---TCTTGAGTTG----------------CT-----------ATTTGC-----------G----T----------TTATG---ATT-----------------------TT--------------------TGTA
droBia1 scf7180000301468:858306-858509 + TATAAATTATGATCG-GTGTGTTTACTT-GG-TATCCTTATTGTTTTA----------TTACCTATGAGTTGCTC-------------TTT--T-GTTTGCTTATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---CAGGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTGAGTTG----------------CT-----------TTTTGT-----------G------T------GTT-----TT-----------------------ACTTTTTCACCA------------CTTTT
droTak1 scf7180000415914:422935-423115 + TTTTAAAT--------TATTG----------------------TTAATATTA----TTTGACTTATGAGTTGCTC-------------TTT--T-GTTTGCGCATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---TAATTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---GCTTGAGTTG----------------CT-----------TCTTGC-----------G----TTT------------G---ATT-----------------------TTCTTACTG------------CTAAA
droEle1 scf7180000490579:645180-645364 - TATTTTTA-------T----------------------------TA----TA----TTTTACCTATGAGTTCTTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---TAAGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTAGTTTG----------------TT-----------ATT----------TTGAG----TTT--TGTG-TTTTTA---------------------------TTTTTGTACAGCTTTT--------ATGA
droRho1 scf7180000768553:9690-9873 + TATT-----------------------------------------------A----TTTTACTAATGAGTTCCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGCT---TATGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTAAGTTG----------------CT-----------TTTTGC-----------G----TTT--TGTG-TTTATT---ATT------------------------TTGTACATCCTTTTTCATTATAACT
droFic1 scf7180000454078:624350-624544 + AACTAATA-------TTAT-------------------------------TA----TTTAATTTTTGAATTGCTC-------------T-T--T-GTTTGCCTATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-GTGC---TATGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTT--TTGCATT-AT---GCTTGAGTTT----------------TG-----------TTTTGC-----------G----T----------TTATA---ATTTTTTATAGATTTTTCTTTAAATTTTTC--GCA--T---------ATATA
droKik1 scf7180000302382:529658-529834 + TATTGC---------TTATTG-----------------------------C-------------ATTTGCTCATT-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTGGTGTTTACAATTTTCCATAGAGCTTGATTACCAAAAACCAAATGGTTT-TTGCATTTAT--GGCTTGAGTTATTGTGTTTATTTTGTGCTTTCTT-----------------------------TT--T----GT-----------------TA--------------------T-T------------TATCT
droAna3 scaffold_12916:15864500-15864667 - dan-mir-9b Known_mirbase TTTAAAAT-------GTAT--------------------------------A----ATTTATTTATGAGTTGCTC-------------TTT--T-GTTTGCACATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TCT----CATATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---TTCTGAGTTG----------------CT-----------TTTG--------T-----T---------GTG-GTTATG---ATT-----------------------TT-------------------TTAAG
droBip1 scf7180000396717:103258-103409 - TTTCAG---------T----------------------------------TA----ATTTATTTATGAGTTGCTC-------------TTT--G-GTTTGCACATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-GTTT---CTGATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTTTTTGCATT-TT---TCTTGAGTTG----------------CT-----------TTTTAT-------------------------------G---ATT------------------------------------------------T
dp5 4_group3:8444140-8444320 + dps-mir-9b Known_mirbase TTT-GCAG-------CTTTTGTTTACTTTGGC------------CA----TG----TTTTCTTTATGAGTTGATC-------------TTT--T-GTTTGCACATTATTTGATCTTTGGTGATTTTAGCTGTATGGTG-TATA-TCAAAGATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCGCTTGAGTTG----------------CT-----------TATG-------------------------------------------------------------TTTTTAAA---------------ATGTT
droPer2 scaffold_1:9895258-9895439 + dpe-mir-9b Known_mirbase GCTTGCAG-------CTTTTGTTTACTTTGGC------------CA----TG----TTTTCTTTATGAGTTGATC-------------TTT--T-GTTTGCACATTATTTGATCTTTGGTGATTTTAGCTGTATGGTG-TATA-TCAAAGATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCGCTTGAGTTG----------------CT-----------TATG-------------------------------------------------------------TTTTTAAA---------------ATGTT
droWil2 scf2_1100000004945:873301-873496 - dwi-mir-9b-2 Known_mirbase TTTTTGTT-------TTACTG----CTT-TT-GCGCTTTATTGTTATATGAGTTGT---AATT--------GAT---------------TTTGATTTTCGCATATTATTTGGTCTTTGGTGATTTTAGCTGTATGGTG-TATG-AGCATAATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---GCTTGAGTTG----------------TT--------T--TCTTTC-----------G----TAT--T---------G---ATT-----------------------TTGATTTAA------------TTACA
droVir3 scaffold_12963:12862809-12862990 - dvi-mir-9b Known_mirbase TGTACCTG-------A----------------------------TAAAT-------ATTAGTTTATTTGTTGCCT------------TTTT--A-TTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGCG---CGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT------GCTTTC-------------------------TTTTATTGTTCA--------C-----TTGTCAT------TAT---TATTATT---ATTATA--------------------TTT------------TTTTT
droMoj3 scaffold_6500:7202271-7202434 + dmo-mir-9b Known_mirbase TATTTT----------TAT--------------------------------A----ATATAATTTGGTTTGGCTT-------------TTT--A-TTTTGCATATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TGCG---CGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTCT-TTGCATT------GCTTTC-------------------------TT------------------------TTCGTTTATTCAG-TTAATT---GCG---------------------TTT---------------------TTAT
droGri2 scaffold_14978:831248-831432 + dgr-mir-9b Known_mirbase TATAAGAT-------TTAT-G----------------------CT---------------ATTTATTTGCTGCCCTTTGTTTGCCCTTTTG--A-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTCTATGGTG-TGCG---CATAATCCACAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT--T---GCTTTC-------------------------TTTTTT--TCCTTCGTTATT-TT----------------------G---ATT---TCGGTA--------------------T-T------------TTGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TATTACAT-------TTATTG----------------------TTAAATTTGTTTA---AACTTATATGTTGCTC-------------TTT--T-GTTTGCATATTATTTGGTCTTTGGTGATTTTAGCTGTATGGTG-TATA---AGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------AAT-----TT-----------------------ACTTTTCTAGTG------------TTACTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23177456.007745623925142072596313361
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22127306.002730616122257664592149
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2412432.0024321045156753478
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2111847.0018471111222340174
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2211829.0018291767193013
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2111221.00122112050106
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................221931.00931472179163117
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................221783.007832684942145
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................241752.00752318206127101
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................201669.00669255133179102
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231509.00509232623833
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................241391.003911529510242
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211236.0023665189954
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241194.0019453212811
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................231194.0019454212612
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191186.001868185245
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................231184.0018488452229
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................251157.0015718524839
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231149.00149101102414
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251124.001244207012
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................211105.0010540252515
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................20188.00885422210
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20186.008685100
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................24165.0065255278
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25150.00503211115
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................23141.0041167810
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23133.003332001
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21131.003130010
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23131.0031180130
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................25126.002612293
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................22126.0026102104
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21126.002613616
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19124.002424000
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22121.002120010
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20119.001911161
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20117.00175642
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22116.00166154
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25116.00163481
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21116.001616000
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18115.00156072
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................26115.00153381
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-T................................................................................................................................................................................................27114.00142840
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26114.001412110
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................24114.00146080
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19111.00118111
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................19111.00113053
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................21111.001110010
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................2419.0094401
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTT-.................................................................................................................................................................................................2618.0080710
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1818.0084031
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2218.0084022
...............................................................................................................GTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2418.0088000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................2318.0088000
...............................................................................................................GTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2317.0077000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGC...................................................................................................................................................................................................2517.0075020
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................2217.0074120
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................2216.0062121
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2316.0063030
.............................................................................................................................................................GAGCTTTATTACCAAAAACC...........................................................................................................................................................2016.0066000
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................1816.0063030
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1916.0064110
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................2215.0053020
................................................................................................................TCTTTGGTGATTTTAGCTGA........................................................................................................................................................................................................2015.0052111
.................................................................................................................CTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................2115.0055000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................2615.0052120
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................1914.0042011
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................2414.0042011
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................2314.0041111
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2214.0044000
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................2314.0044000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................2414.0040211
.........................................................................................TT--T-GTTTGCATATTATTTGG............................................................................................................................................................................................................................2014.0044000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-.................................................................................................................................................................................................2614.0040130
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAA............................................................................................................................................................2114.0041111
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTC-.................................................................................................................................................................................................2614.0040040
................................................................................................................TCTTTGGTGATTTTAGCTTAT.......................................................................................................................................................................................................21133.464536162
...........................................................................................................................................................TAGAGCTTTATTACCAAACC.............................................................................................................................................................2013.0031110
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAC...................................................................................................................................................................................................2513.0031020
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2213.0033000
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................1813.0033000
droSim2
TATTACAT-------TTATTG----------------------TTAAATTTGTTTA---AACTTATATGTTTCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TATA---AGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------AAT-----TT-----------------------ACTTTTCTAGCG------------TTAATSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................221312144.0031214432121346105421790400362903824192522931241611027734630031
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23177347.0077347574433976931100106956869220257139744585666290138
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................22151478.0051478148529671781290014424155726779402015038084000
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................21145304.0045304513264873852008939990788598186650016686158010
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................22131870.0031870263138910270030773431125601066139626705000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................23122746.002274614607160041833815851652291576131000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................24119930.00199301010248003675320386754011238130000
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................23111280.00112807212251700191017554162248021610432000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................2418465.00846555234494003408194723134531051750100
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................2516849.006849004339001493106925161375183050000
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................2016287.006287173802862680037343588993727646178132
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................2114968.0049689220565240082891413119972021410000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2413583.0035835941666580052933210120152824521100
......................................................................................................................GTGATTTTAGCTGTATG.....................................................................................................................................................................................................1712736.00273600000002002734000000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................2412184.002184005181005014675904298030000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................2612106.0021060038007902688631636230000
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1812030.00203000000000002030000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................2511611.0016110006004342367811437220000
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2111459.001459206130300168494428300000
......................................................................................................................GTGATTTTAGCTGTAT......................................................................................................................................................................................................1611337.001337000000107171312000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................2411272.0012724834329800410239191611471100010
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................1911108.0011081377111924005238565950612361231
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2311074.0010743222344200614884703563808000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................2611071.0010710002004001743861002610000
.....................................................................................................................GGTGATTTTAGCTGTAT......................................................................................................................................................................................................1711015.00101500000001491001000000
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................181920.009205433007465906957510221710
........................................................................................................................GATTTTAGCTGTATG.....................................................................................................................................................................................................152845.00169000000027191501629000000
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................221791.007911565737916002326543346100000
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................221787.00787102684001352172700000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................201616.00616100283009210220715418200000
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................191589.005890000000110587000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................231564.0056400141100314718624823400000
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................201557.005570002005310545100000
................................................................................................................TCTTTGGTGATTTTAG............................................................................................................................................................................................................161476.0047600000049684550262000110
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................251473.00473431900207138621527700000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................221454.00454001040052741811238200000
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................221414.0041424271207004735633553300000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................221389.003897621100150152181019032000
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................191377.00377111200591717324000000
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................181355.00355000000411120317200000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................231320.00320154530001159912515110000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................251255.002551044001105556221200000
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................201247.0024700039003656472340600000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................251228.00228245140064377482810000
.......................................................................................................................TGATTTTAGCTGTATG.....................................................................................................................................................................................................162216.50433000000191660392000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241212.0021210313900705011438400000
.......................................................................................................................TGATTTTAGCTGTAT......................................................................................................................................................................................................152196.00392000000192616547135000000
......................................................................................................................GTGATTTTAGCTGTATGG....................................................................................................................................................................................................181181.001810000000200179000000
........................................................................................................................GATTTTAGCTGTATGG....................................................................................................................................................................................................161180.0018000000017620155000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................231175.001750056001322322468500000
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................191165.001651091002531463318100000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231149.00149002600012185148300000
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211141.00141102120019800821610000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................261128.00128000000301760137100000
................................................................................................................TCTTTGGTGATTTTAGC...........................................................................................................................................................................................................171115.001150000001102110000001
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAA............................................................................................................................................................211107.00107006200121031451000000
.....................................................................................................................GGTGATTTTAGCTGTA.......................................................................................................................................................................................................161104.001040000000003101000000
................................................................................................................TCTTTGGTGATTTTAGCTGG........................................................................................................................................................................................................20190.009028154510000001000000
...........................................................................................................................................................TAGAGCTTTATTACC..................................................................................................................................................................15186.0086000000110084000000
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................20186.0086371029000000010000000
.....................................................................................................................GGTGATTTTAGCTGT........................................................................................................................................................................................................15182.0082000000002179000000
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21182.00823115470004394401000
...................................................................................................................TTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................18175.0075000000021369000000
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21169.0069000620002310100000
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20168.0068101490012239000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................27162.006200110017172132000000
................................................................................................................TCTTTGGTGATTTTAGCTGTAGA.....................................................................................................................................................................................................23162.0062000200203055000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................24159.005900100021220231000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAC...................................................................................................................................................................................................25152.00520020001591590200000
...................................................................................................................TTGGTGATTTTAGCTGT........................................................................................................................................................................................................17151.0051000000000051000000
.......................................................................................................................TGATTTTAGCTGTATGG....................................................................................................................................................................................................17151.0051000000460041000000
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................22150.0050000440010041000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................26149.0049201300011236021000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAA.............................................................................................................................................................21149.004901000015111471000000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAC.....................................................................................................................................................................................................23149.004900102005121442000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................23148.00481062200030024100000
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................21148.0048213500632320201000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTAA...................................................................................................................................................................................................25147.00470000001291960100000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................23145.00450821003411114100000
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................19144.00440012009113215010000
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22143.0043000380021101000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGCAA-.................................................................................................................................................................................................26143.00430000001941730000000
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21140.00400044001412104100000
...........................................................................................................................................................TAGAGCTTTATTACCAAA...............................................................................................................................................................18137.0037612000244216000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................24136.0036001000106980200000
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................24133.0033001280000310000000
......................................................................................................................GTGATTTTAGCTGTA.......................................................................................................................................................................................................15232.0064000000211159000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................23131.0031000280000210000000
...............................................................................................................CTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................24131.00310005000000161000000
...............................................................................................................CTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................23130.0030000110010354600000
................................................................................................................TCTTTGGTGATTTTAGCTA.........................................................................................................................................................................................................19130.0030004000301256000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCAA.........................................................................................................................................................24130.0030000200409141000000
....................................................................................................................TGGTGATTTTAGCTGT........................................................................................................................................................................................................16130.0030000000000030000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAC....................................................................................................................................................................................................24130.0030001000431291000000
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................20128.002800020067670000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGG...................................................................................................................................................................................................25127.0027202000110021000000
....................................................................................................................TGGTGATTTTAGCTGTA.......................................................................................................................................................................................................17126.0026000000003122000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................22125.002561200043225000000
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19125.0025000150000018100000
................................................................................................................TCTTTGGTGATTTTAGCTGTACA.....................................................................................................................................................................................................23124.0024000000231062100000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-TA...............................................................................................................................................................................................28123.0023000100109201000000
......................................................................................................................GTGATTTTAGCTGTATGT....................................................................................................................................................................................................18122.0022000000000022000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCC..........................................................................................................................................................23122.002200300084403000000
.........................................................................................................................................................CATAGAGCTTTATTACCAAAAAC............................................................................................................................................................23121.002100200089001001000
.....................................................................................................................GGTGATTTTAGCTGTATGG....................................................................................................................................................................................................19121.0021000000000021000000
...........................................................................................................................................................TAGAGCTTTATTACCA.................................................................................................................................................................16121.0021000000001020000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-A................................................................................................................................................................................................27120.002000000063920000000
................................................................................................................TCTTTGGTGATTTTAGCTGA........................................................................................................................................................................................................20119.001900100053541000000
................................................................................................................TCTTTGGTGATTTTAGCTGTACAA....................................................................................................................................................................................................24119.001900000044740000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-.................................................................................................................................................................................................26118.001800000025416000000
..................................................................................................................TTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................22118.001800000067320000000
.....................................................................................................................GGTGATTTTAGCTGTATGT....................................................................................................................................................................................................19117.0017000000000017000000
.........................................................................................................................ATTTTAGCTGTATGG....................................................................................................................................................................................................15217.0034000000020032000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24117.001700010043321300000
................................................................................................................TCTTTGGTGATTTTAGCTGTC.......................................................................................................................................................................................................21117.001700000036116000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAC...................................................................................................................................................................................................25117.001700000076202000000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACA...........................................................................................................................................................23116.001600000054430000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAT-.................................................................................................................................................................................................26116.001601000024720000000
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................22115.001510050011005200000
................................................................................................................TCTTTGGTGATTTTAGCTGTGA......................................................................................................................................................................................................22115.001500020033321100000
dm3
TATTACAA-------TTATTC----------------------TTAAATTTG----TTTAACTTATATGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TTTA-TGTATATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GTTTGAGTTG----------------AT-----------TTTA--------T-----TTGGTAT------TCT-----TT-----------------------ACTTTTCTCGCG------------TTACTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2317101047.0071010471901011427284041115117141628002320361129832249470855318319242853033388203771869112767102621548050526898213731804927061441315933154532697016035190412180363309325568061000000000000000000391439993130292675078288254848647630668139841635201108017392039330221080111124622982148816494178418658299122233554425292773109326042582739991619192101444488754123314991437635645004463311840497712588389841827436864184917493301993358128989171295578851222282531708194667150193356453652503236343136229317232784319892014435937039209132047371456857771333784326537722211528500610856321459368487121662569360681343961892574892583354315858511899151623204063188148174440733076132390578633644101020681100188314063940431948490224753107341484912891088419328123861530095600297541705217467312302949336165318379314291420619493191920845351423077581094560381882944229337103117314000771383073588259930146966071703827590527332039429664914157511113624323714132827502363196118074260205903881987365552588846609820352626630552311849411462814678361626614304881233562828910873419748813471282307176044275908871231241177516454498436729932292572575947321198312177439992351
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2213956441.003956441005121591182169631128516678108101041271154847790495061092585810668711962489198038594437182324745210284233452779609814685995785561291520053994101222232048190000000000000000009275911772307077393850724163985628261371329569251328134654121672018136011628138812707094719572609401010561542529575107117245513236301123782170653113243155292911186872571986889612615180819154175571330387067458160551301211689107023058990198231528278107910819162881797132252880178810641514163201401308631290299371082401616281038981995197226262330431423322803849773918232945014542089119732762662129014511311815365218771347147786462319747125721926595562045605355537348753707613995222372034442000282520923981379490149250633855322635133163910034000160190840162662273555818143284117197477167266377203826822188632198125352110633860316713615538747112161236802811798747481678848285618777413643118754791380484137620631493874284005631164820721899657664287980594337436227823652240620292695114425314605658255623695190395283825684254001109711779811650579311634265079218331612311010388522852231436049513756314603111571368
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................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................2212802.00280200000000001101000000101900400000002211510204340320203000000000000000000000000104310620100120000001100000003010300110200000000000010000000110031041074994301418210000600001210100010101201600004010442000403000000412100000430644741012151312442000200001401002131002501312122441072136148321287171197191209208951131145216769176615510431403732445243121434262578284381563113152225083319120
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................2312569.002569000000010000000000001500000000000004352111573080311982300012100000000000000000111108023520000001010200000000165101110060000000000000000000000006443215283915773192450000000000000000001000000000000081121900010100000019240040000018410646269104925124173100221002701000000000100000000101001010001442947303026016106202020020734143142468245603100021061441231002322000112181619503200
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................2412099.0020990000000000000100000021000000000000048402111040633739450000000000000000000000031370000000101000002100000022210001000000200020100020000011100006507415412471525221300000100000010000300000000000001311200010090000036000000400191830291616183329164770042000010214641213301611640816236145110141114340181392386269224761819111231331006041561830072255213919719261129141011224381248272118743230
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................1912038.0020380000000000000000000011205003000000002011202002111326410000000000000000000000089880010033000000000010000012220000000200000000000000000000120001030011145360000001000340003000000020200000000200490000020000000014000000201155772175210800010000200100201100000002020133221131071062077546352962629527225490080001520220929392401114312168061010101001000240171212
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................2411665.0016650000000000000000000023100000000000072841011412192101261313840000000000000000000000041020231001501036001002001101035120101000000000000101000000000010052725004440364234241035000001420001100000020003000001002611811000107000000473800000000000002735231910005000011004824187011334520197610891662181061311626142438514241325194268401001151160114513610100131000030000001000130143100
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2011612.001612000000000000000000002201003000000013333602221364682710000000000000000000000055850000000100100000001000000001000001000100000000000000000133012001274611520210200000200000000000000000000101031102000001000000320020000303422315113863250000000011000120100008002301009313038274002930314159171401012714102010020117028104627030229533302214228310784283121052151220847
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................2111582.00158200000010000000000000010300200000000010000010020109531100000000000000000000000000200500206000002320000001322316000001020000100000010018100010000712412410433414100000772365530100100101010035106610100000000000010000000157341310512483153150003000011101841626300113031113117813464528482518421026225784592512369168781211103505185912113317102193111632132615121635274788976236304514380
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................1911512.0015120000000000000000000047000030000000000121035000033040000030000000000000000000486246520200103401020013600015113111012003017000000000000100020000000242613425450333010012711234501302000200000500372010136000001900000020050010193110111018112011160011000012000200000213305000034094312598641191452221210918632931142363324653251216594222619418481252027023003132448431122210
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAA.............................................................................................................................................................2111236.00123600000000000000000000000000100000002000000120000100001000000000000000000000001313142400000020000000000002000010100000000000000000000000000000000002030223200602010000005000001000000000200200000003000000000000200000001101010031866127300300000001001020000000200030237312292133453211124575021199443020062114102841601661007541516591536856714959101003131242360
................................................................................................................TCTTTGGTGATTTTAGCTGTC.......................................................................................................................................................................................................2111195.001195000000000000000000001102001000000000001101140101130111803000000000000000000000005000000000010000102100000004201000000000200000000211100681001000020215561132760000000107000000000000000000000001100000000000001000000033020101102220600000000010005782010030220061100110187981121792115724741453365129010221210811771311412388043101521228102511201003102103160
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1911108.001108000000000000000000005800001000000004310000020102700210000000000000000000000024020000000000000000000100000000000000000000000000000001000030031000234450001000100010000000000000010000000000115000000000001000000000000326143100023001200000000000000302000000032040112020435520050376119713647830501200011110701540180511214031110272037133001022324614838
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1811067.001067000000000000000000001315000010000000023101100004302203100000000000000000000000411200000001000100000000000000600000000000000000000000000000060101001212118164420000030004000000000010000000020011401000102000000130000000313521121700020000000000000000011000010101520101400123584410573658611356107107103001022007082919000025082515200110300000111222510
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................181998.00998000000000000000000003702000000000000000010001000001100000000000000000000000032410000321000000000000300000100000100000000000000000000000000023150281222100000000100000100000020000000000101170000020030000000000000010943210201001000000001001000000000000010100201308202510047296161369148179805202000131101072235020013172102000000000000000004000
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................211904.00904000000000000000000000000001000000000000002400001135100000000000000000000000033010006000300000002000120010070000000000000000000000000000000001000072270215120000020141001000001001010100300010211000010000000110001001385361013616585122400030000100002000001030040001111420214301026141315208846412011000110101170833411050009227201581010716321302003522643520
................................................................................................................TCTTTGGTGATTTTAGCTT.........................................................................................................................................................................................................191801.008010000000000000000000000070000000000102050111001110101000000000000000000000000110100000011002000102000000004820010000000000000000000030000000202003220640200000002000500000000000000200100006120000200000000000000001001002000100021001000001011373421100552194103541351221155552025163231253416130468459436300002511021050401201160000011051022210072601100
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................251747.007470000000100000000000000000000000000220000231010111011100000000000000000000000492603003200000001010001000103001111000000000000000000000000000045032402321030000000000000000000000000000000002102000001000000330000000008210211358211611512000000000000032200121201301001246522430011532121873064504631002112010401534111507100201117329611136113206015235407138
................................................................................................................TCTTTGGTGATTTTAGCTGTACT.....................................................................................................................................................................................................231745.0074500001000000000000000010000300000000030412040015022607000000000000000000000000000000000000000000000000000100000000000000000000001000200000000203021112112210000000100000000000000000000000000000000100000001000000000000072100100200000000010213412601021822474902111341093181420248024033503532317641000001000150100756143230040000000000000000000010003000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................221742.0074200001000010000000000012000300000000003010410020332312000000000000000000000001223000100001002000000011000402000000000000000000001000000000000316002301042110000000108000000000000000000007000503000000100000220000007521202524660311400000000001012010000301200201101303034000271310151696532306160200300050613570300073832671582310068030212107414060
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................221672.006720000000000000000000003600010000000042802002521013201400000000000000000000000020210000000100000000000000003000000000100000000000000000000020001100260301161230000004190001000000000000000010001100000000000000100000014087111581923117611220110000000012325003091131120064230531102231938111183220100000000201140202007330324313135361216182220164772227660
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................231631.006310000000001000000000020050000000000003021011000501390900000000000000000000000100000000000100000000000000000000000000000000000000000010000100110161210301002100000000000000000100000000000000411300010100000006000000000110503010408000030003200002220000410551101170001045042032182192321601000001150000117728744343100327101000000000000000005150
droEre2
AATTACAC-------TAATTG----------------------TTTTATTTG----TTTAACTTATCAGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTA---TGTGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTT--------T-----TTCGTTT--T----GT-----T----------------------ACATTTTTCTAACG------------TTACTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23179710.007971035845635799157213979171569724
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22143465.00434653144457491863744344577881
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2413650.0036501685201470162737962
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2113299.00329923427643404893027
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2212860.00286026900011225132
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................2412304.002304663132118560299730
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2112298.00229822701214911
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2211874.00187491922419114432580
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2211499.00149912693767268470
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................2011328.0013287862122213001780
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2311225.00122516921476103125016
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231718.0071850219117161612
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................251634.00634230153343529
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................231520.005205003014120
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................241471.0047119010658164115
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191247.0024714723235571
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251222.00222217004010
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................231217.002173001051801
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241185.00185168409310
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231176.001761490032418
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211175.0017510003426357
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................201161.00161159000200
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................211153.0015370101038340
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................221117.00117366431850
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................241107.00107106001000
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21196.009696000000
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................20184.0084630111360
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23179.0079610000018
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25171.0071151019738
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23161.006153500210
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21155.005553100100
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19142.004242000000
...............................................................................................................CTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................24139.0039181310160
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................22139.003939000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20139.0039912014130
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................24131.003118202360
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21131.0031181001110
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20128.002815001219
...............................................................................................................CTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................23126.002613121180
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22125.002525000000
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................19123.002340103312
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-TG...............................................................................................................................................................................................28122.002200000022
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22120.002015000320
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGC...................................................................................................................................................................................................25120.002021001016
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24120.00205062151
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18118.00188100090
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25118.00186000840
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................25118.001814111100
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................22117.001716000010
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................23117.00175210810
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................26116.001615000100
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19115.001511000400
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................23115.00153101190
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................23114.001411000201
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................23114.001414000000
.................................................................................................................CTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................21114.001414000000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................22114.00146100250
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26113.00136004120
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................19113.00135001430
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................18112.001212000000
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................19111.00118000210
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................24110.001010000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................22110.00106100120
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2219.0094001130
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................2219.0096000030
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................2118.0087100000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................2418.0081000070
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2017.0077000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAT-.................................................................................................................................................................................................2617.0071000006
................................................................................................................TCTTTGGTGATTTTAGCTT.........................................................................................................................................................................................................1917.0074010020
................................................................................................................TCTTTGGTGATTTTAGCTTA........................................................................................................................................................................................................2017.0076000010
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................2617.0077000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTT-.................................................................................................................................................................................................2616.0062000220
................................................................................................................TCTTTGGTGATTTTAGCTGA........................................................................................................................................................................................................2016.0064000110
................................................................................................................TCTTTGGTGATTTTAGCTTAT.......................................................................................................................................................................................................21115.916558000250
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1815.0054000100
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................2015.0050400010
............................................................................................................................................................AGAGCTTTATTACCAAAAAC............................................................................................................................................................2015.0055000000
droYak3
TATTTCAT-------TAATTT----------------------TTATATTTG----TTTAACTTATCGGTTGCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTT-TATGTGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-CTGCATT-AT---GCTTGAGTTG----------------AT-----------TTTT--------T-----TT-----------------C---A------------------------TTTTCTAACT------------TTATTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23148087.004808795155582321258142366092285005273
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22138551.003855180510301236351527411106477910127
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2114486.00448610689331861263161740009
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2213732.0037324219366430310000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2213718.0037188145212183418201310000
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2211992.00199243641436158311160000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2411579.001579157305331938162000163
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2211217.001217111604271000006
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................2011166.00116638227735492239530030
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2311013.00101311581555901058860000
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................211857.0085708272811000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231756.007560154541514330000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................241492.0049212136260141017430000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................241471.0047148431734341000015
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................231299.002990112156250330000
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................201220.002202021800000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................211182.00182445057614200000
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191136.0013616405781513050
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231115.0011507728100000000
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211114.00114054172100500017
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241107.001074110020000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................24186.008604234100000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................25182.0082110191611200131
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................25177.007705511110000000
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20170.0070064420000000
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18166.0066270000060510
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................23166.00660346140300000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23145.00451221830010000
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22144.0044534210020000
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................20142.00420251500110000
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21135.0035381800420000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................23135.0035862000100000
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21132.0032031100000000
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20128.00280131400010000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................24127.00270151020000000
...............................................................................................................CTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................24125.0025051540100000
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19120.0020020000000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25120.0020161020010000
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21120.0020019100000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20118.001816111350000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................26116.0016012400000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22116.0016015100000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23116.0016016000000000
...............................................................................................................CTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................23116.001606720100000
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19116.001607810000000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................22116.001604910020000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25115.0015011030010000
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................22115.001507620000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................25114.001402920010000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26113.001301390000000
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................22111.001141600000000
.......................................................................................................................................GTG-TGTT-TATGTGTTCCA.................................................................................................................................................................................18111.001100271100000
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................19111.001108210000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24111.001103101510000
................................................................................................................TCTTTGGTGATTTTAGC...........................................................................................................................................................................................................17110.001000000101080
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................2219.00922410000000
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2219.00908100000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2218.00807001000000
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................1818.00803500000000
...................................................................................................................TTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2117.00703220000000
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................2116.00601400010000
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................1916.00604110000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGC...................................................................................................................................................................................................2516.00602400000000
................................................................................................................TCTTTGGTGATTTTAGCTGTGC......................................................................................................................................................................................................2216.00600600000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................2616.00606000000000
droEug1
TAAAAAAA------------G----------------------TTA---TTA----ATTTACTTTTAAGTTGCCT-------------TTT--T-GTTTGCATATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTTGTTTT---TAATATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCGTT-AT---TCTTGAGTTG----------------CT-----------ATTTGC-----------G----T----------TTATG---ATT-----------------------TT--------------------TGTASizeHit CountTotal NormTotal
No Reads
droBia1
TATAAATTATGATCG-GTGTGTTTACTT-GG-TATCCTTATTGTTTTA----------TTACCTATGAGTTGCTC-------------TTT--T-GTTTGCTTATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---CAGGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTGAGTTG----------------CT-----------TTTTGT-----------G------T------GTT-----TT-----------------------ACTTTTTCACCA------------CTTTTSizeHit CountTotal NormTotal
No Reads
droTak1
TTTTAAAT--------TATTG----------------------TTAATATTA----TTTGACTTATGAGTTGCTC-------------TTT--T-GTTTGCGCATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---TAATTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---GCTTGAGTTG----------------CT-----------TCTTGC-----------G----TTT------------G---ATT-----------------------TTCTTACTG------------CTAAASizeHit CountTotal NormTotal
No Reads
droEle1
TATTTTTA-------T----------------------------TA----TA----TTTTACCTATGAGTTCTTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGTC---TAAGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTAGTTTG----------------TT-----------ATT----------TTGAG----TTT--TGTG-TTTTTA---------------------------TTTTTGTACAGCTTTT--------ATGASizeHit CountTotal NormTotal
No Reads
droRho1
TATT-----------------------------------------------A----TTTTACTAATGAGTTCCTC-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGCT---TATGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-AT---GCTTAAGTTG----------------CT-----------TTTTGC-----------G----TTT--TGTG-TTTATT---ATT------------------------TTGTACATCCTTTTTCATTATAACTSizeHit CountTotal NormTotal
No Reads
droFic1
AACTAATA-------TTAT-------------------------------TA----TTTAATTTTTGAATTGCTC-------------T-T--T-GTTTGCCTATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-GTGC---TATGTTCCATAGAGCTTTATTACCAAAAACCAAATGGTT--TTGCATT-AT---GCTTGAGTTT----------------TG-----------TTTTGC-----------G----T----------TTATA---ATTTTTTATAGATTTTTCTTTAAATTTTTC--GCA--T---------ATATASizeHit CountTotal NormTotal
No Reads
droKik1
TATTGC---------TTATTG-----------------------------C-------------ATTTGCTCATT-------------TTT--T-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTGGTGTTTACAATTTTCCATAGAGCTTGATTACCAAAAACCAAATGGTTT-TTGCATTTAT--GGCTTGAGTTATTGTGTTTATTTTGTGCTTTCTT-----------------------------TT--T----GT-----------------TA--------------------T-T------------TATCTSizeHit CountTotal NormTotal
No Reads
droAna3
TTTAAAAT-------GTAT--------------------------------A----ATTTATTTATGAGTTGCTC-------------TTT--T-GTTTGCACATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TCT----CATATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---TTCTGAGTTG----------------CT-----------TTTG--------T-----T---------GTG-GTTATG---ATT-----------------------TT-------------------TTAAGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22129889.00298894311210682075742777916
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23128266.0028266511111576326561529524747
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2213044.0030441430241311
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2311808.001808381211469862767
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2111572.001572325978406212245
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2211484.00148411710263639157109
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2411407.0014074314651941644257
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231968.009686181285325
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................221852.0085213758010481013
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................241710.007104453110221516
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................241510.005108726838176040
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................201510.0051014516825499132
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................221454.00454414314032
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................211397.00397355364020
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241250.002502917545010
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................231249.002495115344100
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................211181.0018111538496
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251145.00145295462000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241117.0011759111019
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................251101.0010187118013
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................19180.0080311227424
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................26168.006864121000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................23155.005537112005
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................21155.0055181710037
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................20151.00510510000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23148.00486411000
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................23147.00474248335
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................24139.00390235002
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................20138.003812233000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................24136.003610251000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24126.00261219112
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................25126.0026673064
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20124.00242300100
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21123.0023930074
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25123.00231152131
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19122.00227130011
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20122.0022084235
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20119.00193121012
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22119.00191412011
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21117.00171420001
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26117.00172411000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25114.0014092012
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19113.00131300000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTAA...................................................................................................................................................................................................25111.0011118001
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23110.0010631000
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1819.009250011
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1919.009331101
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2318.008250001
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................2218.008121013
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2117.007610000
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................2216.006411000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCAA.........................................................................................................................................................2416.006240000
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2216.006501000
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................1916.006120012
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................2316.006010023
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................1815.005211100
.................................................................................................................CTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2115.005050000
..................................................................................................................TTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2015.005050000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................2215.005230000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................2615.005032000
droBip1
TTTCAG---------T----------------------------------TA----ATTTATTTATGAGTTGCTC-------------TTT--G-GTTTGCACATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-GTTT---CTGATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTTTTTGCATT-TT---TCTTGAGTTG----------------CT-----------TTTTAT-------------------------------G---ATT------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
dp5
TTT-GCAG-------CTTTTGTTTACTTTGGC------------CA----TG----TTTTCTTTATGAGTTGATC-------------TTT--T-GTTTGCACATTATTTGATCTTTGGTGATTTTAGCTGTATGGTG-TATA-TCAAAGATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCGCTTGAGTTG----------------CT-----------TATG-------------------------------------------------------------TTTTTAAA---------------ATGTTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................231185334.0018533431106229455336387521286775532834454218989
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................221169715.001697159011120747923593232163020773499367824553
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................21112319.00123192463044094316111924134271050541
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2219356.00935609041130440251362374
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2118986.008986088934031550228
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCC...........................................................................................................................................................2217610.0076102344522174260535316427456101
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2215950.005950145031661237204178418215
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................2415948.0059485295730543113632761517405264
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2413978.003978126794841531243705107226
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................2413677.003677221211863205123292660130
...........................................................................................................................................................TAGAGCTTTATCACCAAAACC............................................................................................................................................................2113021.0030211217068849093371077697
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................2012863.00286382109761445591082968365
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2312533.0025333602471310771223120241521
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................2312441.00244101511842821156934112
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2312142.00214202009190370363110
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2311848.001848015273328769150268
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2211137.001137161100755310801
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................261856.0085607544021017600
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241851.0085107445130016640
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251721.007210685202204701
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211622.00622034262213251351573
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................201524.00524051700100330
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................201519.0051903430091101133112
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................251514.00514037610034038461
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191401.004013304515101314397
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................211372.00372037200000000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................241364.00364035410000360
............................................................................................................................................................AGAGCTTTATCACCAAAACCC...........................................................................................................................................................211282.00282028100000001
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................231268.00268025810012303
...........................................................................................................................................................TAGAGCTTTATCACCAAAAC.............................................................................................................................................................201222.0022211543048210850
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................231195.00195018600101601
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCA...........................................................................................................................................................221178.001780138361201000
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................231176.00176158262205123472
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................221175.00175017500000000
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................221174.001740147003001842
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................191173.00173017210000000
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................201153.001530610150251924
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241152.00152026821513001213
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................191145.001450860030239105
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................211138.001380100122310965
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................221131.00131012900000200
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCCA..........................................................................................................................................................231129.001290102150104520
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................261121.001210631027022620
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................241115.00115027307237651
............................................................................................................................................................AGAGCTTTATCACCAAAACC............................................................................................................................................................20199.009909900000000
..........................................................................................................................................................ATAGAGCTTTATCACCAAAACC............................................................................................................................................................22189.00891422323011700
...............................................................................................................ATCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................23187.0087047100013170
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25179.0079028707013132
.................................................................................................................CTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................25177.007707400102000
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18176.00760221000032615
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22165.0065044203011230
...............................................................................................................ATCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................24163.0063043100001414
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................24162.006206200000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................22159.005904700200253
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................23155.005505500000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................25152.0052024213110731
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................24144.0044011101810670
.................................................................................................................CTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................24142.004204200000000
..........................................................................................................................................................ATAGAGCTTTATCACCAAAACCC...........................................................................................................................................................23142.0042016130001372
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCCT..........................................................................................................................................................23136.003603110002110
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................18136.003603100000500
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................24135.003502740201100
...........................................................................................................................................................TAGAGCTTTATCACCAAAACA............................................................................................................................................................21135.003502720201300
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................19133.003302610000312
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................18132.003201810100516
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................26131.0031016000031110
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................18131.003103100000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTC...................................................................................................................................................................................................25131.003102200126180
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................19129.002902001200303
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................20129.002903188000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATCC....................................................................................................................................................................................................24128.002801000010260
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25125.00250920100904
.................................................................................................................CTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................23125.002502500000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATCT....................................................................................................................................................................................................24124.002404102010160
..................................................................................................................TTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................22123.002301600001222
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................20123.0023011000001020
...........................................................................................................................................................TAGAGCTTTATCACCAAAA..............................................................................................................................................................19121.00210910200900
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................24119.00190600101830
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................25118.00180910100700
................................................................................................................TCTTTGGTGATTTTAGCTGTATTAA...................................................................................................................................................................................................25118.00180600601050
.............................................................................................................................................................GAGCTTTATCACCAAAACCC...........................................................................................................................................................20117.001701500000200
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................24117.001701010202110
...................................................................................................................TTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................21115.001501200200010
..................................................................................................................TTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................22114.001401200100100
........................................................................................................................GATTTTAGCTGTATG.....................................................................................................................................................................................................15114.001400000003110
.................................................................................................................CTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................20114.001401400000000
...................................................................................................................TTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................18114.00140800000240
................................................................................................................TCTTTGGTGATTTTAGCTGTTA......................................................................................................................................................................................................22113.00130820300000
...............................................................................................................ATCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................22112.00120100000920
..................................................................................................................TTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................21112.00120000710130
................................................................................................................TCTTTGGTGATTTTAGCTT.........................................................................................................................................................................................................19112.00121900100100
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................23111.00110800001020
..........................................................................................T--T-GTTTGCACATTATTTGA............................................................................................................................................................................................................................19110.00100800000200
............................................................................................................................................................AGAGCTTTATCACCAAAAC.............................................................................................................................................................19110.001001000000000
...........................................................................................................................................................TAGAGCTTTATCACCAAAAA.............................................................................................................................................................20110.00100810001000
............................................................................................................................................................AGAGCTTTATCACCAAAACCA...........................................................................................................................................................2119.0090900000000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................2619.0090900000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTC....................................................................................................................................................................................................2419.0090400201020
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCCAA.........................................................................................................................................................2419.0090720000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTG...................................................................................................................................................................................................2519.0090100000701
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAG...................................................................................................................................................................................................2519.0090300300300
............................................................................................................................................................AGAGCTTTATCACCAAAACCCA..........................................................................................................................................................2219.0090900000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................2619.0090410210010
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCT...........................................................................................................................................................2218.0080520100000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................2518.0080800000000
..........................................................................................................................................................ATAGAGCTTTATCACCAAAAC.............................................................................................................................................................2118.0080610100000
..................................................................................................................TTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2118.0080800000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATCCC...................................................................................................................................................................................................2517.0073100000030
................................................................................................................TCTTTGGTGATTTTAGCTA.........................................................................................................................................................................................................1917.0070610000000
droPer2
GCTTGCAG-------CTTTTGTTTACTTTGGC------------CA----TG----TTTTCTTTATGAGTTGATC-------------TTT--T-GTTTGCACATTATTTGATCTTTGGTGATTTTAGCTGTATGGTG-TATA-TCAAAGATCCATAGAGCTTTATCACCAAAACCCAAATGGTTT-TTGCATT-TTTTCGCTTGAGTTG----------------CT-----------TATG-------------------------------------------------------------TTTTTAAA---------------ATGTTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22145835.00458351998364921222194926391535
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23126437.0026437191147803079121417645409
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2112743.002743027391111
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCC...........................................................................................................................................................2212238.002238118988620276452
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2111947.001947143120851152143250
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2211469.00146981125367171734
...........................................................................................................................................................TAGAGCTTTATCACCAAAACC............................................................................................................................................................2111306.00130679136044186330
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2211143.001143011268414
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................241944.00944495073670107175
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................231906.009061413535814722032
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................201774.0077433413187614391
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................241675.006757148867111919
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231623.00623145353891116
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................241447.0044728288647456
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................231413.00413438224012
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241270.00270024623010
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................261187.001871115422000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251173.00173015914000
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................221170.00170281381210
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191129.0012923466171027
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................201117.001174985424
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................251109.0010968617000
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20192.00920920000
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................22192.009245392051
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21190.00900900000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................23174.00740628211
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCCA..........................................................................................................................................................23170.007020463001
............................................................................................................................................................AGAGCTTTATCACCAAAACCC...........................................................................................................................................................21167.00670670000
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................21164.006403891511
...........................................................................................................................................................TAGAGCTTTATCACCAAAAC.............................................................................................................................................................20159.005914324072
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22157.00570570000
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................24155.00550541000
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................23153.005341544521
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26148.004803015003
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................21144.00441241396
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCA...........................................................................................................................................................22142.00423390000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................23141.00410410000
..........................................................................................................................................................ATAGAGCTTTATCACCAAAACC............................................................................................................................................................22139.00393341010
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19134.00340340000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23133.00330300003
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18123.00234160120
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................25121.00210612210
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................22120.00200200000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................24119.0019871120
............................................................................................................................................................AGAGCTTTATCACCAAAACC............................................................................................................................................................20118.00180180000
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19117.00170160001
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................23117.00170170000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24114.0014040361
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................24113.00130130000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................25112.00120120000
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................19112.0012080310
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25111.0011461000
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCCT..........................................................................................................................................................23111.0011340121
...........................................................................................................................................................TAGAGCTTTATCACCAAAACCT...........................................................................................................................................................22110.0010430003
.................................................................................................................CTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................22110.0010091000
...........................................................................................................................................................TAGAGCTTTATCACCAAAACA............................................................................................................................................................21110.0010091000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................24110.0010025030
...............................................................................................................ATCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2318.008080000
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................1818.008080000
...........................................................................................................................................................TAGAGCTTTATCACCAAAA..............................................................................................................................................................1918.008260000
..........................................................................................................................................................ATAGAGCTTTATCACCAAAACCC...........................................................................................................................................................2318.008800000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................2617.007060001
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................2517.007112003
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2017.007051001
............................................................................................................................................................AGAGCTTTATCACCAAAACCCA..........................................................................................................................................................2216.006060000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................2416.006060000
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1815.005031001
................................................................................................................TCTTTGGTGATTTTAGCTT.........................................................................................................................................................................................................1915.005220010
............................................................................................................................................................AGAGCTTTATCACCAAAACCA...........................................................................................................................................................2115.005050000
................................................................................................................TCTTTGGTGATTTTAGCTGTAGA.....................................................................................................................................................................................................2315.005050000
............................................................................................................................................................AGAGCTTTATCACCAAAAC.............................................................................................................................................................1915.005050000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAT-.................................................................................................................................................................................................2615.005401000
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................1815.005040010
..................................................................................................................TTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2115.005002021
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2014.004030010
................................................................................................................TCTTTGGTGATTTTAGCTGTAAC.....................................................................................................................................................................................................2314.004400000
...............................................................................................................ATCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2414.004030010
...........................................................................................................................................................TAGAGCTTTATCACCAAAACT............................................................................................................................................................2114.004300001
.............................................................................................................................................................GAGCTTTATCACCAAAACCC...........................................................................................................................................................2014.004040000
.................................................................................................................CTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................2214.004040000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTC...................................................................................................................................................................................................2514.004102001
................................................................................................................TCTTTGGTGATTTTAGCTGTATGCAA-.................................................................................................................................................................................................2613.003003000
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAG...................................................................................................................................................................................................2513.003210000
................................................................................................................TCTTTGGTGATTTTAGCTGTC.......................................................................................................................................................................................................2113.003000120
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................2013.003210000
..................................................................................................................TTTGGTGATTTTAGCTGT........................................................................................................................................................................................................1813.003010011
droWil2
TTTTTGTT-------TTACTG----CTT-TT-GCGCTTTATTGTTATATGAGTTGT---AATT--------GAT---------------TTTGATTTTCGCATATTATTTGGTCTTTGGTGATTTTAGCTGTATGGTG-TATG-AGCATAATCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT-TT---GCTTGAGTTG----------------TT--------T--TCTTTC-----------G----TAT--T---------G---ATT-----------------------TTGATTTAA------------TTACASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23261099.001221985441709038218819212551
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22218288.5036577358513781821160442346
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2423957.5079156013305450541417
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2222091.50418324503291351060209
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2221395.0027902079016194222
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2121290.5025814061013109939114
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2221039.502079814212455670
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................232781.0015623268131114164
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................242738.0014761726216117110
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................212576.001152410631786
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................202483.0096617330410232166
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................232374.00748223515091
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................232373.007460150556229
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................242361.00722431744343329
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................242172.0034407902605
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................212169.00338126531013514
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................262168.5033709302440
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................252152.003044201123435
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................232151.503032437221426
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................252142.0028403902450
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................252131.0026208401780
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................212120.00240065614524
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................192102.002046754105716
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26283.501670811571
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................22275.0015012151203
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25268.5013718311411
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................23258.50117172674225
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................20243.50870512331
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................20238.5077172040
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................22238.00760270445
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21234.5069064050
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................22232.00641992322
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................24231.50630490140
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20231.00624136336
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................22227.50551993231
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20226.00520310165
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25225.0050011471
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................24221.0042960252
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23219.50390140250
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................24219.5039010380
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................23216.5033211191
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................23215.5031172273
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................22215.0030350211
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................19214.5029750134
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................26213.5027040221
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................24213.0026032174
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................19212.5025013084
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21212.0024022011
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19211.5023116033
................................................................................................................TCTTTGGTGATTTTAGCTGG........................................................................................................................................................................................................20211.0022201010
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23211.0022016060
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................23210.5021012090
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................27210.0020030170
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19210.0020118001
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18210.0020370100
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAT-.................................................................................................................................................................................................2629.0018101160
................................................................................................................TCTTTGGTGATTTTAGCTGTATCC....................................................................................................................................................................................................2428.501756006
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................2028.0016160000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................2528.0016000160
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................2228.0016500101
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................2228.001609061
................................................................................................................TCTTTGGTGATTTTAGCTGTAAC.....................................................................................................................................................................................................2327.5015010140
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................2136.6720123131
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................1826.501304054
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................2426.5013020101
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-.................................................................................................................................................................................................2626.5013000121
................................................................................................................TCTTTGGTGATTTTAGCTGTATTAA...................................................................................................................................................................................................2526.5013000130
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................1826.5013013000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................2526.001206060
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................2335.6717011150
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAG...................................................................................................................................................................................................2525.5011010100
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................2325.001008020
...............................................................................................................GTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2425.0010010000
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2234.6714014000
...................................................................................................................TTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2124.50905031
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................2424.00808000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTT-.................................................................................................................................................................................................2624.00810070
................................................................................................................TCTTTGGTGATTTTAGCTGTATCCC...................................................................................................................................................................................................2523.50722003
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAC...................................................................................................................................................................................................2523.50700070
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAA............................................................................................................................................................2123.50701060
...............................................................................................................GTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2323.00606000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................2623.00605010
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTC-.................................................................................................................................................................................................2623.00600015
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTC...................................................................................................................................................................................................2523.00622020
.........................................................................................................................................................CATAGAGCTTTATTACCAAAAA.............................................................................................................................................................2223.00630030
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................2432.67810133
....................................................................................................................TGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2022.50504001
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGC...................................................................................................................................................................................................2522.50501040
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2022.50501040
................................................................................................................TCTTTGGTGATTTTAGCTGTATGACA-.................................................................................................................................................................................................2622.50500050
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................2622.50500050
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCC..........................................................................................................................................................2322.50521020
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................1822.50505000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-A................................................................................................................................................................................................2722.00400040
.................................................................................................................CTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................2332.00605100
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTG...................................................................................................................................................................................................2522.00400040
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAC-.................................................................................................................................................................................................2622.00400040
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAT-.................................................................................................................................................................................................2622.00400040
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................2422.00400040
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................2122.00420020
droVir3
TGTACCTG-------A----------------------------TAAAT-------ATTAGTTTATTTGTTGCCT------------TTTT--A-TTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTGTATGGTG-TGCG---CGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT------GCTTTC-------------------------TTTTATTGTTCA--------C-----TTGTCAT------TAT---TATTATT---ATTATA--------------------TTT------------TTTTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................231682520.0068252072174128736024187465829587393694534847536259383172127151050121411431154572704552387611106108331894020816625046581750555595883278731612754959587081593164451957394338706060123691258241624432363978529521566991224413355485444906936357705561804538349261454936198228028107872782325183
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................221404207.004042072616311075325855617231810032401257810857292431487882363416141286173552469567399268884457151020596317354646332889943587422266821909591168286643758081031241820342926362844432534273623291097151698153024803561247563480642534545895039354428184230375015176703292442265921494
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................24160994.006099415281548285593175812161140710076610649954800000012701854410261104165717314692701533938305460710159796576211473116325568112314113711210911262523339158975623520599792165349693778431511883270555455583
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................21142291.00422915710717043639572641734323103533443435869328201015124328232199068046910281032536514239681319226298418178372523495614141071818173127442218202714152544711612090158895214221281941240026071888155521791721113928837710641002
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................22129534.00295341103122892513747216010491419840493618623341094443736025518744544716711357201155738911890863691144710303324915258161144210971491613506485648483462402947021461301230244391358143106332447
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................22128713.002871357716327155542623719889593513518431101076183414142524423832703451233354735654063140467419094240113212123312100416523560348515455045032934180184142140137125154860570817911705
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................23128242.00282421117461723210212169888851148497219042828231183045715346286317122417255233621937817313023516215000000101021110000021242021501011201197139191118821108613348271
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................24119672.00196726171963782401024521916453582788644927111260253682772324174602281725724041699264579338362348187628736118891484635462285741061679524332353167327433220917224619189933848911761236
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................20112618.0012618164346957221247104534349101148194249162721311313802557925720534333616420310729121511825032820117426128220230300000000100072610813501119470565955623320317498195173378150217501495
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................24111502.0011502491731621151916961218332495560002003106197184156333308714294444511247590400400133342122532152310425100657193228310111421071652449445230274315299382135183507431
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................23111409.0011409011497945786461133216103540012009128210379129106182783618881572192851839110020212102040100000340717010363216622241252364128234119579242308918890
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................23110220.00102200128659154210512188865900000060037844611952101171811518820115814647220201100211000000017144018717221342079866303327203015382329338850880
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................2616072.006072004416201016081916838000000000745391275210001070832121537320024512000111000000021900085431350111829837382761819122190218625609
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................2514471.004471134319953511286452541741038271001002202916553136163352117362718212325216440001204403200130010245194754351029613523619010411421713883108195273271
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................2413457.0034570185246070321128900000020118633183331032614337918920112936310101010000100000002800087525855462306620131117390220210
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................2513363.0033630027125030110446431000000000131326553201011150451651269914101000010200000000021303015167306372761817541361066281254234
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................2513132.00313200181410105001718554000000000949211122400037504492189523300000010000000000000240001035855247699342212538790201223
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................2112930.0029307143072791223524151183131313543354347074503414584612467549253837022100000000100020022150373272871949891235264901806256193238
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................1912887.002887122210371150624240531507611000175146634185639751294914237464745444022930012000001111011021718200414511311513016497911117764282710879
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................2612112.002112007211011050514109250000001009314387720130148093216183993110000000100000000000180001512231231962510327115318685
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2211513.001513001055816338570818316120000001102316102320931310561397122000000000000000000091000671310262121532611
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2111170.0011701088153070210021000010303612717191197131211316141660000000000000000000007103311151200100384139
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................2411091.0010910092100010100215800000000008610301117092419470000000100010000000120006523270192351843022841297977
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................2311072.00107215644262927411198217111301010053014229111246473079345413313501000000000110100000111031010181822122836231337352891011
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................251961.0096101116409041131620000002018351520010134011392424611000001110000000000511001178171831616151314183118185253
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................221837.00837530192711315330060020010000280014626122111418515562612260000000000000000000317081041474200424321722417
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................251837.0083710179201180410117551200000000124121527334123182123116181471010000110010000001280130414444831281918192614199172721
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................221814.0081437162810180573044000000120017195414610313505118831000000010000101000002220757769523729311621264616255256
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................231807.00807593471102000000100000015533111110020106000012110000100000000000201221271694911811015131101
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211701.007010057732467812195611617100000300479101832231141061112512224000000000000000000011511019610802010090155
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................231680.00680002178000100011100000020082516353541154921637694614100000001000100000000120211065612458226314831117
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231656.006560013338310417012311700000000010111920105425110786860000000000110000000040003135449230100102417245246
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................181546.0054610100147392188110121201208243125162622182020341511353621291210000000000010000001000006502104000060042
................................................................................................................TCTTTGGTGATTTTAGC...........................................................................................................................................................................................................171542.005420000000000000000000000000000000000000000523023137194112416300000011911096000000611053647
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................261495.0049500611050301310500000000020712600001307115112000000000001001100002012559669400203001821244152
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241423.0042324676512021202311000050011124781014516421604390000000000000000000921002231727321611516564396
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................271405.0040500721030400724700000000015482000016087147400010000000000000000400071637023020010119182638
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................221397.0039714117140000000000000200514841001200000600000000000000000000010021034252722552406950142
...............................................................................................................CTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................241365.00365007310246032116271010000030016151612227104121161019147118000000000000000010092301010101000200022
................................................................................................................TCTTTGGTGATTTTAGCTGTATCC....................................................................................................................................................................................................241362.0036215053031140000000000000190020111111617320120000218000000000000000002000500201012182924371300001
................................................................................................................TCTTTGGTGATTTTAGCTGTC.......................................................................................................................................................................................................211343.0034312725010123101810000000001800262130181471101801005280000000000000110000161600210146114101420121
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................211342.00342311345171491720030001005001012455831356132267000000000110000000118901320171166559815041213
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................201330.00330005444180420000111000300201396127671397610916480000000000000000100072091469706106031049
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-A................................................................................................................................................................................................271311.0031100102010700418100000000033910160000270520181040000000000000000000010000023332010000012942029
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-.................................................................................................................................................................................................261301.003010020512040551560000010006151212000161453720000110000000000000030101023241615156710612671125
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................241286.00286003434654191912400012020053910001173132130211390000100001000000000269001015201000020012
.........................................................................................................................................................CATAGAGCTTTATTACCAAAAAC............................................................................................................................................................231272.002721101100000000000000000000012000000000010000110001000000000000005111139632128435312002
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTC-.................................................................................................................................................................................................261242.00242110151600010100000001600311108627050000115000000001100001001012440102219121620402700221
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................181229.00229007117837113170200010004013496134010063354493000000000000000000000115254110001110002
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................201220.00220002101223817020620000001001671099111133444292000000000000000000000007806820021030023
................................................................................................................TCTTTGGTGATTTTAGCTGTCC......................................................................................................................................................................................................221218.0021871251416701300000000001901920007126180800008250000000000000000000001301000035307400002
...............................................................................................................CTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................231217.002170010320604000220200200016135919106101553141318805000000001000000000001101070200000014051
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTC...................................................................................................................................................................................................251209.002093011025300401111000001602401212214425061100124000000010010020000011300020366609711021
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................231203.00203012100102010110010000003202131000021112100100100112000010100010008753529526152640012
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................191192.001920021182150220010010000100121046235663168545000000000000000000000010211114801020060033
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................201184.0018412302110010111010010011473761012210257777300000000000000000000107001105831838123231
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................221180.001800081310000004110000010147477631510012121658000000000000000000001020021310141011232144
................................................................................................................TCTTTGGTGATTTTAGCTGTAGA.....................................................................................................................................................................................................231169.0016900102000000001000000000173580000001406000000000000000000000000000434124101100131122
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTCC-.................................................................................................................................................................................................261167.001672531140006000001000070011010151411290150000220000000000000000000000200000013738400000
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................201153.00153001321100110000000000000031113010000210000000000000000000000000000030000000000010
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................191151.00151008112128191303100000010067762381004650252000000000000000000000021304300110020010
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAT-.................................................................................................................................................................................................261148.00148000310001010000000000000110000001002510000000000010000000001000002827192230016391217
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................231146.00146123110000111020000003003103124171214101100000000000000000002100401816132100126551011
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-AA...............................................................................................................................................................................................281139.0013900100000000147700000000000023000000402200000000000000000000000000017198000000134108
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-T................................................................................................................................................................................................271137.001370020500011201000000000052047121041213080000000000000000000000000074300000065112127
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................241127.001270011403012030210000005021600007225101200110000000010000000000231000066501000030342
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTT-.................................................................................................................................................................................................261119.0011901405120111314100000020014033010310100043000001010110100000130100032494027321435
................................................................................................................TCTTTGGTGATTTTAGCTGTATAT....................................................................................................................................................................................................241106.00106001020100000000000003001113124410312654330000000000000000000000012711610000031364
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................221105.0010500502021803011000000000121640100202121400000000000000000000000000339005100133468
................................................................................................................TCTTTGGTGATTTTAGCTGTAAC.....................................................................................................................................................................................................231103.0010310110020000000000000000100300000001010000000000000000000000010002181017201420528911
................................................................................................................TCTTTGGTGATTTTAGCTGTATTAA...................................................................................................................................................................................................251101.001010021100010028100000010122131202230387612000000000000000000070000478400000001133
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................181100.0010000702312000000001010011138226341441126220000000000000000000000005042130000120101
................................................................................................................TCTTTGGTGATTTTAGCTGTATTC....................................................................................................................................................................................................24185.0085005103000001000000007002100181241105000007000000000000000000070101000020002001111
................................................................................................................TCTTTGGTGATTTTAGCTGTCA......................................................................................................................................................................................................22181.0081001030200001020000001005000002100472291301000000000000000000000100120000100010001
................................................................................................................TCTTTGGTGATTTTAGCTGTACA.....................................................................................................................................................................................................23180.0080002120300010020000000001001000012012460000000000000000000002100001611500001032244
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAT-.................................................................................................................................................................................................26173.007300111000000030000000001121200003702333100000000000000000000000000811100210050244
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCAA.........................................................................................................................................................24172.0072000000000004200000000001215100007035512000000000000000000000000101011220000020032
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................21171.007100570000000000000000000001021111120102000000000000000000000000000001000000000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAT-.................................................................................................................................................................................................26170.0070011000103000100000000000101000011020010000000100000000000001000024135311001251106
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................22169.00691010100010011110000000013111010200101060000000000000000000000100060448724111004
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAG...................................................................................................................................................................................................25158.005800010010000020000000000001210000301121100000000000000000000000000810300400040156
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAA............................................................................................................................................................21157.00570031100001001200000000003062310300144120000000000000000000010000052103110100021
...........................................................................................................................................................TAGAGCTTTATTACCAAAA..............................................................................................................................................................19155.00550040103000000000000011040252531500102121000000000001000000000000011130000110002
................................................................................................................TCTTTGGTGATTTTAGCTGTATGACA-.................................................................................................................................................................................................26153.00530011000000001000000000010000000000266300000000000000000000000000057222000022244
......................................................................................................................GTGATTTTAGCTGTATGG....................................................................................................................................................................................................18153.005300103170150200100000010091000000000110082000000000000000000000000000000000000000
..................................................................................................................TTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................23152.005200002002102211100000000020102000000010021000000000000000000000000021303100220332
................................................................................................................TCTTTGGTGATTTTAGCTGTTA......................................................................................................................................................................................................22251.0010200201140200012000000200201102300101111000000000000000000000101021151710000000421127
................................................................................................................TCTTTGGTGATTTTAGCTGTATCT....................................................................................................................................................................................................24151.00510003111000000000000040010001632701000003000000000000000000010000021000216111100
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................26151.00510010402050014100000020030232300120011031000000000000000000000000011010102200010
................................................................................................................TCTTTGGTGATTTTAGCTGTATCCC...................................................................................................................................................................................................25149.004910100000000000000000030000000011001000001000000000000000000000010000050775600000
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................19144.004401350000000000000000000021000000000000100000000000000000000000000001000000010011
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................21143.00430110123221000100000040020110000200000002000000000000000000010000033201011020003
................................................................................................................TCTTTGGTGATTTTAGCTC.........................................................................................................................................................................................................19242.008460501600010000000000100211115532020001060000000000000000000002000000132118501100
droMoj3
TATTTT----------TAT--------------------------------A----ATATAATTTGGTTTGGCTT-------------TTT--A-TTTTGCATATTATTTGTTCTTTGGTGATTTTAGCTGTATGGTG-TGCG---CGTATTCCATAGAGCTTTATTACCAAAAACCAAATGGTCT-TTGCATT------GCTTTC-------------------------TT------------------------TTCGTTTATTCAG-TTAATT---GCG---------------------TTT---------------------TTATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................................................TCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................23156910.00569101379397575851298261575320
................................................................................................................TCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................22150025.00500252697113958551442177181644
................................................................................................................TCTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................2118972.0089724287317881553761364
................................................................................................................TCTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................2216138.00613825425301623294879
................................................................................................................TCTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................2414578.004578207881012551478145
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2212831.0028312662320282304190
................................................................................................................TCTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................2012781.002781145410066111843207
................................................................................................................TCTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................2212482.0024825730424135
.................................................................................................................CTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................2112140.0021402098001401
................................................................................................................TCTTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................2311822.0018225312062751051749
................................................................................................................TCTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................2311441.001441899990342119
................................................................................................................TCTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................2411329.00132924561194486793
.................................................................................................................CTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................2211223.001223108813011183
................................................................................................................TCTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................2411003.00100339052121748745
................................................................................................................TCTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................231755.0075526451654236
................................................................................................................TCTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................231645.0064524833214121785
................................................................................................................TCTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................191412.0041228831912639
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................251401.0040198838713669
................................................................................................................TCTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................241385.0038510085823430
.................................................................................................................CTTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................201342.0034233300090
................................................................................................................TCTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................241339.00339288301452
................................................................................................................TCTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................251256.002562201901115
................................................................................................................TCTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................241239.002391462901612
.................................................................................................................CTTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................231230.00230196500272
................................................................................................................TCTTTGGTGATTTTAGCTGC........................................................................................................................................................................................................201224.0022421002210
.................................................................................................................CTTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................211209.0020920400050
...........................................................................................................................................................TAGAGCTTTATTACCAAAAAC............................................................................................................................................................211168.00168524148225
..................................................................................................................TTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................211139.00139332901706
................................................................................................................TCTTTGGTGATTTTAGCTGTT.......................................................................................................................................................................................................211125.0012537759625
..................................................................................................................TTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................201111.0011175425232
................................................................................................................TCTTTGGTGATTTTAGCTGTAG......................................................................................................................................................................................................221108.0010853511435
.................................................................................................................CTTTGGTGATTTTAGCTGT........................................................................................................................................................................................................191101.0010110100000
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGA...................................................................................................................................................................................................25192.00922212123916
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCA..........................................................................................................................................................23190.009036101484
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAA...................................................................................................................................................................................................25187.0087331721331
................................................................................................................TCTTTGGTGATTTTAGCTGTATGAAA-.................................................................................................................................................................................................26181.008162402121
.................................................................................................................CTTTGGTGATTTTAGCTGTAAA.....................................................................................................................................................................................................22178.00787700010
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGC...................................................................................................................................................................................................25169.0069143103714
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTC...................................................................................................................................................................................................25168.0068153561524
...................................................................................................................TTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................20151.005112101352
.................................................................................................................CTTTGGTGATTTTAGCTGTATGA....................................................................................................................................................................................................23140.00403610030
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAACC...........................................................................................................................................................23139.00391000371
................................................................................................................TCTTTGGTGATTTTAGCTGTC.......................................................................................................................................................................................................21137.003711313109
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTAA-.................................................................................................................................................................................................26136.003612160152
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACA...........................................................................................................................................................22133.00337601154
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................21132.00322700050
...................................................................................................................TTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................19131.00312110090
..................................................................................................................TTTGGTGATTTTAGCTGTA.......................................................................................................................................................................................................19130.00301920162
................................................................................................................TCTTTGGTGATTTTAGCTGTATGTA...................................................................................................................................................................................................25128.00285211181
.................................................................................................................CTTTGGTGATTTTAGCTGTATAAA...................................................................................................................................................................................................24127.00272700000
................................................................................................................TCTTTGGTGATTTTAGCTGTATCC....................................................................................................................................................................................................24126.00261711124
................................................................................................................TCTTTGGTGATTTTAGCTGTATTT....................................................................................................................................................................................................24122.0022625351
................................................................................................................TCTTTGGTGATTTTAGCTGTAAT.....................................................................................................................................................................................................23122.00222300161
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTT-.................................................................................................................................................................................................26122.0022481252
.................................................................................................................CTTTGGTGATTTTAGCTG.........................................................................................................................................................................................................18122.00222200000
.................................................................................................................CTTTGGTGATTTTAGCTGTATGT....................................................................................................................................................................................................23121.00211900020
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18121.00211702110
..................................................................................................................TTTGGTGATTTTAGCTGTAA......................................................................................................................................................................................................20121.00211020090
.................................................................................................................CTTTGGTGATTTTAGCTGTATA.....................................................................................................................................................................................................22121.00211800030
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTC-.................................................................................................................................................................................................26120.00203101312
................................................................................................................TCTTTGGTGATTTTAGCTGTATGCC...................................................................................................................................................................................................25119.00191300114
...........................................................................................................................................................TAGAGCTTTATTACCAAAAA.............................................................................................................................................................20119.00191310005
..........................................................................................................................................................ATAGAGCTTTATTACCAAAAAC............................................................................................................................................................22117.0017800180
....................................................................................................................TGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................19117.00175100101
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-.................................................................................................................................................................................................26116.0016250072
.................................................................................................................CTTTGGTGATTTTAGCTGTATGC....................................................................................................................................................................................................23116.00161300030
..................................................................................................................TTTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................22115.0015820131
.................................................................................................................CTTTGGTGATTTTAGCTGTAAAA....................................................................................................................................................................................................23114.00141400000
................................................................................................................TCTTTGGTGATTTTAGCTGTG.......................................................................................................................................................................................................21113.0013520051
.................................................................................................................CTTTGGTGATTTTAGCTGTATAA....................................................................................................................................................................................................23113.00131300000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACT...........................................................................................................................................................22113.0013410053
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-.................................................................................................................................................................................................26113.0013810022
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTG-.................................................................................................................................................................................................26113.00131200010
................................................................................................................TCTTTGGTGATTTTAGCTGTCA......................................................................................................................................................................................................22112.00121101000
....................................................................................................................TGGTGATTTTAGCTGTAT......................................................................................................................................................................................................18112.0012800040
.....................................................................................................................GGTGATTTTAGCTGTATG.....................................................................................................................................................................................................18112.0012300081
.................................................................................................................CTTTGGTGATTTTAGCTGTATC.....................................................................................................................................................................................................22112.00121000020
...............................................................................................................TTCTTTGGTGATTTTAGCTGTATG.....................................................................................................................................................................................................24111.0011800030
...............................................................................................................TTCTTTGGTGATTTTAGCTGTAT......................................................................................................................................................................................................23111.00111100000
..................................................................................................................TTTGGTGATTTTAGCTGTATT.....................................................................................................................................................................................................21111.00110101000
................................................................................................................TCTTTGGTGATTTTAGCTGTTA......................................................................................................................................................................................................22111.0011241130
................................................................................................................TCTTTGGTGATTTTAGCTGTAAC.....................................................................................................................................................................................................23111.0011200090
...................................................................................................................TTGGTGATTTTAGCTGTATGG....................................................................................................................................................................................................21111.0011800030
................................................................................................................TCTTTGGTGATTTTAGCTGTATGCCC-.................................................................................................................................................................................................26110.00101000000
................................................................................................................TCTTTGGTGATTTTAGCTGTATTC....................................................................................................................................................................................................24110.0010016120
.................................................................................................................CTTTGGTGATTTTAGCTGTATGGT...................................................................................................................................................................................................24110.0010710011
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGAA-A................................................................................................................................................................................................27110.0010600040
.................................................................................................................CTTTGGTGATTTTAGCTGTAC......................................................................................................................................................................................................21110.0010600040
................................................................................................................TCTTTGGTGATTTTAGCTGTATGGTA-AA...............................................................................................................................................................................................2819.009900000
...........................................................................................................................................................TAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................2319.009500031
................................................................................................................TCTTTGGTGATTTTAGCTGTATTA....................................................................................................................................................................................................2419.009123120
droGri2
TATAAGAT-------TTAT-G----------------------CT---------------ATTTATTTGCTGCCCTTTGTTTGCCCTTTTG--A-GTTTGCATATTATTTGCTCTTTGGTGATTTTAGCTCTATGGTG-TGCG---CATAATCCACAGAGCTTTATTACCAAAAACCAAATGGTTT-TTGCATT--T---GCTTTC-------------------------TTTTTT--TCCTTCGTTATT-TT----------------------G---ATT---TCGGTA--------------------T-T------------TTGCTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
................................................................................................................TCTTTGGTGATTTTAGCTCTAT......................................................................................................................................................................................................2213735.0037353110625
................................................................................................................TCTTTGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................2312331.0023312134197
................................................................................................................TCTTTGGTGATTTTAGCTCT........................................................................................................................................................................................................201371.00371231140
................................................................................................................TCTTTGGTGATTTTAGCTCTA.......................................................................................................................................................................................................211343.0034324499
................................................................................................................TCTTTGGTGATTTTAGCTCTATGG....................................................................................................................................................................................................241310.0031028822
.................................................................................................................CTTTGGTGATTTTAGCTCTAT......................................................................................................................................................................................................211283.002832830
.................................................................................................................CTTTGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................221191.001911910
................................................................................................................TCTTTGGTGATTTTAGCTCTATGT....................................................................................................................................................................................................24197.00976631
...........................................................................................................................................................CAGAGCTTTATTACCAAAAACC...........................................................................................................................................................22179.00792455
................................................................................................................TCTTTGGTGATTTTAGCTCTATT.....................................................................................................................................................................................................23154.0054477
.................................................................................................................CTTTGGTGATTTTAGCTCT........................................................................................................................................................................................................19125.0025250
.................................................................................................................CTTTGGTGATTTTAGCTCTATGG....................................................................................................................................................................................................23123.0023230
................................................................................................................TCTTTGGTGATTTTAGCTC.........................................................................................................................................................................................................19119.0019145
................................................................................................................TCTTTGGTGATTTTAGCTCTATGA....................................................................................................................................................................................................24116.0016142
.................................................................................................................CTTTGGTGATTTTAGCTCTA.......................................................................................................................................................................................................20116.0016160
................................................................................................................TCTTTGGTGATTTTAGCTCTATA.....................................................................................................................................................................................................23113.001394
..........................................................................................................................................................ACAGAGCTTTATTACCAAAAAC............................................................................................................................................................22113.001358
................................................................................................................TCTTTGGTGATTTTAGCT..........................................................................................................................................................................................................18111.0011101
................................................................................................................TCTTTGGTGATTTTAGCTCTT.......................................................................................................................................................................................................21110.001091
..................................................................................................................TTTGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................2119.00990
..................................................................................................................TTTGGTGATTTTAGCTCTAT......................................................................................................................................................................................................2019.00990
..........................................................................................................................................................ACAGAGCTTTATTACCAAAAACC...........................................................................................................................................................2318.00826
................................................................................................................TCTTTGGTGATTTTAGCTCTAA......................................................................................................................................................................................................2216.00660
...................................................................................................................TTGGTGATTTTAGCTCTAT......................................................................................................................................................................................................1916.00660
................................................................................................................TCTTTGGTGATTTTAGCTCTATTT....................................................................................................................................................................................................2416.00651
...................................................................................................................TTGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................2015.00550
....................................................................................................................TGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................1915.00550
.................................................................................................................CTTTGGTGATTTTAGCTCTATGT....................................................................................................................................................................................................2314.00440
..................................................................................................................TTTGGTGATTTTAGCTCTA.......................................................................................................................................................................................................1913.00312
............................................................................................................................................................AGAGCTTTATTACCAAAAACC...........................................................................................................................................................2113.00330
................................................................................................................TCTTTGGTGATTTTAGCTCTATGGT...................................................................................................................................................................................................2513.00321
................................................................................................................TCTTTGGTGATTTTAGCTCTATC.....................................................................................................................................................................................................2313.00321
.................................................................................................................CTTTGGTGATTTTAGCTCTATT.....................................................................................................................................................................................................2212.00220
..................................................................................................................TTTGGTGATTTTAGCTCTATGGA...................................................................................................................................................................................................2312.00220
....................................................................................................................TGGTGATTTTAGCTCTAT......................................................................................................................................................................................................1812.00220
...............................................................................................................CTCTTTGGTGATTTTAGCTCTAT......................................................................................................................................................................................................2312.00220
..................................................................................................................TTTGGTGATTTTAGCTCT........................................................................................................................................................................................................1812.00220
................................................................................................................TCTTTGGTGATTTTAGCTCTATCC....................................................................................................................................................................................................2412.00220
..................................................................................................................TTTGGTGATTTTAGCTCTATGG....................................................................................................................................................................................................2212.00220
................................................................................................................TCTTTGGTGATTTTAGCTCTATGGC...................................................................................................................................................................................................2512.00220
................................................................................................................TCTTTGGTGATTTTAGCTCTATGTG...................................................................................................................................................................................................2512.00220
...........................................................................................................................................................CAGAGCTTTATTACCAAAAAC............................................................................................................................................................2111.00101
................................................................................................................TCTTTGGTGATTTTAGCTCTATGAA...................................................................................................................................................................................................2511.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATGC....................................................................................................................................................................................................2411.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTAC......................................................................................................................................................................................................2211.00101
................................................................................................................TCTTTGGTGATTTTAGCTCTATGTAT-.................................................................................................................................................................................................2611.00110
...........................................................................................................................................................CAGAGCTTTATTACCAAAA..............................................................................................................................................................1911.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATTCG...................................................................................................................................................................................................2511.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATGGCA-.................................................................................................................................................................................................2611.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTAG......................................................................................................................................................................................................2211.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATGGA...................................................................................................................................................................................................2511.00110
.....................................................................................................................GGTGATTTTAGCTCTATG.....................................................................................................................................................................................................1811.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATTA....................................................................................................................................................................................................2411.00101
.................................................................................................................CTTTGGTGATTTTAGCTCTATGA....................................................................................................................................................................................................2311.00110
......................................................................................................................GTGATTTTAGCTCTATGT....................................................................................................................................................................................................1811.00110
.................................................................................................................CTTTGGTGATTTTAGCTCTATA.....................................................................................................................................................................................................2211.00110
...............................................................................................................................................................GCTTTATTACCAAAAACC...........................................................................................................................................................1811.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTATGAGT-.................................................................................................................................................................................................2611.00110
...............................................................................................................CTCTTTGGTGATTTTAGCTCTATG.....................................................................................................................................................................................................2411.00110
...........................................................................................................................................................CAGAGCTTTATTACCAAAAACCT..........................................................................................................................................................2311.00110
...................................................................................................................TTGGTGATTTTAGCTCTATGG....................................................................................................................................................................................................2111.00110
.................................................................................................................CTTTGGTGATTTTAGCTCTATTTG...................................................................................................................................................................................................2411.00110
................................................................................................................TCTTTGGTGATTTTAGCTCTAGTA....................................................................................................................................................................................................2411.00110
................................................................................................................TCTTTGGTGATTTTAGCA..........................................................................................................................................................................................................1830.33101

Generated: 10/20/2015 at 06:55 PM