ID:

dse-mir-9a

 Coordinate:

scaffold_29:261384-261461 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -33.4 -33.4

Flybase annnotation

pre_miRNA [Dsec\mir-9a-RM]; utr5 [utr5_plus_8673]; miRNA [Dsec\miR-9a-RA]

No Repeatable elements found

Sense Strand Reads

TTCCCTTTCAACCATCTGCAGTGTTACAAAACCGGCTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAGCCAAAAACGAAGCCCACATTGCGTATGCTTAA

********************************************((((..(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).)))).))))..******************************************* 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V113

male body		 M054

female body

 V115

head
...........................................................TCTTTGGTTATCTAGCTGTATG................................................................................................. 22 0 1 235175.00 235175 134005 49708 15995 35467
...........................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 0 1 134949.00 134949 89921 17385 18207 9436
...........................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 0 1 33076.00 33076 4069 7848 16283 4876
..................................................................................................TAAAGCTAGCTTACCGAAGTTA.......................................................... 22 0 1 9922.00 9922 6857 624 582 1859
..................................................................................................TAAAGCTAGCTTACCGAAGTT........................................................... 21 0 1 4781.00 4781 1341 1314 266 1860
.................................................................................................ATAAAGCTAGCTTACCGAAGTT........................................................... 22 0 1 3539.00 3539 759 1236 278 1266
.................................................................................................ATAAAGCTAGCTTACCGAAGTTA.......................................................... 23 0 1 2709.00 2709 1758 211 288 452
...........................................................TCTTTGGTTATCTAGCTGTA................................................................................................... 20 0 1 1866.00 1866 170 527 778 391
...........................................................TCTTTGGTTATCTAGCTGTATGAA............................................................................................... 24 1 1 1819.00 1819 869 373 306 271
............................................................CTTTGGTTATCTAGCTGTATGA................................................................................................ 22 0 1 1498.00 1498 113 14 1359 12
............................................................CTTTGGTTATCTAGCTGTATG................................................................................................. 21 0 1 1239.00 1239 97 36 1086 20
............................................................CTTTGGTTATCTAGCTGTAT.................................................................................................. 20 0 1 1197.00 1197 5 2 1188 2
...........................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................ 23 1 1 1138.00 1138 261 277 439 161
..................................................................................................TAAAGCTAGCTTACCGAAGTTAA......................................................... 23 0 1 837.00 837 547 46 11 233
.............................................................TTTGGTTATCTAGCTGTATG................................................................................................. 20 0 1 749.00 749 544 39 59 107
...........................................................TCTTTGGTTATCTAGCTGT.................................................................................................... 19 0 1 672.00 672 120 41 271 240
............................................................TCTTGGTTATCTAGCTGTATG................................................................................................. 21 2 1 657.00 657 586 47 4 20
...........................................................TCTTTGGTTATCTAGTTGTATGA................................................................................................ 23 1 1 630.00 630 609 4 10 7
...........................................................TCTTTGGTTATCTAGCTGCATG................................................................................................. 22 1 1 585.00 585 142 396 5 42
...........................................................TTTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 582.00 582 532 18 17 15
...........................................................TCTTTGGTTATCTAGCTATG................................................................................................... 20 2 1 568.00 568 403 52 29 84
...........................................................TCCTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 568.00 568 469 47 8 44
.............................................................TTTGGTTATCTAGCTGTATGA................................................................................................ 21 0 1 483.00 483 358 20 76 29
............................................................TCTTGGTTATCTAGCTGTATGA................................................................................................ 22 2 1 474.00 474 449 14 5 6
...........................................................TCTTTGGTTATTTAGCTGTATGA................................................................................................ 23 1 1 443.00 443 397 8 33 5
...........................................................TCTTTGGTTATCTAGCTGTATGAT............................................................................................... 24 1 1 441.00 441 212 101 78 50
...........................................................TTTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 428.00 428 390 8 28 2
...........................................................TCTTTGGTTATCTAGCTGAATG................................................................................................. 22 1 1 402.00 402 34 314 0 54
...........................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................. 25 2 1 391.00 391 163 98 30 100
...........................................................TCTTTGGTTATCTAGCTGTATT................................................................................................. 22 1 1 359.00 359 46 89 157 67
...........................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................. 21 1 1 356.00 356 5 99 96 156
...........................................................TCCTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 353.00 353 315 19 8 11
...........................................................TCTTTGGTTATTTAGCTGTATG................................................................................................. 22 1 1 280.00 280 222 18 28 12
...........................................................TCTTTGGCTATCTAGCTGTATG................................................................................................. 22 1 1 276.00 276 125 60 61 30
...........................................................TCTTTGGTTATCTAGCCGTATG................................................................................................. 22 1 1 272.00 272 184 58 4 26
...........................................................TCTTTGGTTATCTAGCTGCATGA................................................................................................ 23 1 1 270.00 270 109 142 7 12
...........................................................TCTTTGGTTATCTAGTTGTATG................................................................................................. 22 1 1 253.00 253 208 15 19 11
...........................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................ 23 1 1 253.00 253 141 15 27 70
...........................................................CCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 251.00 251 160 41 28 22
.................................................................................................ATAAAGCTAGCTTACCGAAG............................................................. 20 0 1 243.00 243 11 47 5 180
...........................................................TCTTTGGTTACCTAGCTGTATG................................................................................................. 22 1 1 240.00 240 163 42 8 27
...........................................................TCTTTGGTTATCTATCTGTATG................................................................................................. 22 1 1 230.00 230 90 38 62 40
...........................................................TCTTTGGTTATCTAGCTGGATG................................................................................................. 22 1 1 229.00 229 19 168 37 5
...........................................................TCTTTGGTGATTTAGCTGTATG................................................................................................. 22 2 1 224.00 224 167 21 18 18
...........................................................TCTTTGGTTATCTGGCTGTATG................................................................................................. 22 1 1 222.00 222 154 38 8 22
...........................................................TCTTTGGTTATCTATCTGTATGA................................................................................................ 23 1 1 222.00 222 88 10 109 15
...........................................................TCTTTTGTTATCTAGCTGTATG................................................................................................. 22 1 1 220.00 220 131 28 18 43
...........................................................TCTTTGGTTATCCAGCTGTATG................................................................................................. 22 1 1 220.00 220 145 51 4 20
...........................................................TCTTTGGTTATCTAGCTGTATA................................................................................................. 22 1 1 214.00 214 86 46 36 46
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAA......................................................... 24 0 1 206.00 206 147 15 3 41
...........................................................TCTTTGGTTGTCTAGCTGTATG................................................................................................. 22 1 1 202.00 202 141 36 4 21
...........................................................TCTTTGGTTATCTACCTGTATG................................................................................................. 22 1 1 201.00 201 150 23 12 16
...........................................................TCTTCGGTTATCTAGCTGTATG................................................................................................. 22 1 1 201.00 201 115 45 20 21
...........................................................TCTTTGGTTATCTAGCCGTATGA................................................................................................ 23 1 1 197.00 197 159 21 10 7
..................................................................................................TAAAGCTAGCTTACCGAAGT............................................................ 20 0 1 196.00 196 22 75 6 93
.................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................ 21 0 1 190.00 190 14 84 15 77
...........................................................TCTCTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 190.00 190 111 37 14 28
...........................................................CCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 189.00 189 127 18 32 12
...........................................................TCTTTGGTTATCTAGCTGTACG................................................................................................. 22 1 1 187.00 187 97 56 6 28
............................................................TCTTTGTTATCTAGCTGTATGA................................................................................................ 22 3 1 183.00 183 133 7 37 6
...........................................................TCTTTGTTTATCTAGCTGTATG................................................................................................. 22 1 1 180.00 180 82 30 39 29
..........................................................CTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 179.00 179 116 12 8 43
...........................................................TCTTTGGCTATCTAGCTGTATGA................................................................................................ 23 1 1 177.00 177 81 14 73 9
...........................................................TCTTTTGTTATCTAGCTGTATGA................................................................................................ 23 1 1 171.00 171 121 6 30 14
...........................................................TCTTTGGTTATCTAGCTTTATG................................................................................................. 22 1 1 171.00 171 98 27 6 40
...........................................................TCTTTGGTTATCTACCTGTATGA................................................................................................ 23 1 1 169.00 169 135 13 19 2
...........................................................TCTTTGGTTATCTCGCTGTATG................................................................................................. 22 1 1 159.00 159 99 39 1 20
...........................................................TCTTTGGTCATCTAGCTGTATG................................................................................................. 22 1 1 157.00 157 92 45 4 16
...........................................................TCTTTGGTTATCTAGCTGAATGA................................................................................................ 23 1 1 154.00 154 10 132 3 9
...........................................................TCTTTGGTTACCTAGCTGTATGA................................................................................................ 23 1 1 154.00 154 124 11 12 7
...........................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................ 23 1 1 152.00 152 94 24 13 21
...........................................................TCTTTGGTTATCTAGCTGTGTG................................................................................................. 22 1 1 148.00 148 105 23 6 14
...........................................................TCTTTGGTTATCTAGCTGTT................................................................................................... 20 1 1 145.00 145 0 49 57 39
...........................................................TCTTTGGTTATCTAGATGTATG................................................................................................. 22 1 1 139.00 139 99 16 2 22
...........................................................TCTTTGGTTATCCAGCTGTATGA................................................................................................ 23 1 1 134.00 134 102 11 11 10
...........................................................TCTTTGGTTATCTAGCTGTATC................................................................................................. 22 1 1 134.00 134 69 29 14 22
...........................................................TCTTTGGTTATCTAACTGTATG................................................................................................. 22 1 1 134.00 134 107 11 1 15
...........................................................TCTTTGGTTATCTAGCTGTATGAC............................................................................................... 24 1 1 131.00 131 94 7 16 14
..................................................................................................TAAAGCTAGCTTACCGAAG............................................................. 19 0 1 130.00 130 11 8 5 106
...........................................................TCTTTGGTTATCTGGCTGTATGA................................................................................................ 23 1 1 127.00 127 97 15 4 11
...........................................................TCTTTGGTTATCTAGCTCTATG................................................................................................. 22 1 1 127.00 127 66 27 9 25
...........................................................TCTTTGGTTATCTAGCTGTGTGA................................................................................................ 23 1 1 126.00 126 97 9 10 10
...........................................................TCTTCGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 123.00 123 76 14 26 7
..........................................................CTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 119.00 119 98 2 13 6
............................................................TCTTTGTTATCTAGCTGTATG................................................................................................. 21 3 2 118.50 237 169 18 24 26
...........................................................TCTTTGGTCATCTAGCTGTATGA................................................................................................ 23 1 1 117.00 117 86 11 10 10
...........................................................TCTTTGGTTATCTAGCTATGA.................................................................................................. 21 3 3 115.00 345 292 15 23 15
...........................................................TCTTTAGTTATCTAGCTGTATG................................................................................................. 22 1 1 114.00 114 61 15 6 32
...........................................................TCTTTGGTTATCTAGCTGGATGA................................................................................................ 23 1 1 114.00 114 11 59 43 1
...........................................................TCTTTGTTTATCTAGCTGTATGA................................................................................................ 23 1 1 112.00 112 62 6 39 5
...........................................................TCTTTGGTTATCTAGCTGTAGG................................................................................................. 22 1 1 112.00 112 2 3 106 1
...........................................................TCTTTGGTTATCTAGCTGTCTG................................................................................................. 22 1 1 110.00 110 50 38 1 21
...........................................................TCTTTGGTTATCTATCTGTAT.................................................................................................. 21 1 1 109.00 109 7 8 91 3
...........................................................TCTTTCGTTATCTAGCTGTATG................................................................................................. 22 1 1 109.00 109 55 20 16 18
...........................................................TCTTTGGTTATCTAGCTGTATTA................................................................................................ 23 1 1 109.00 109 67 13 20 9
...........................................................TCTTTGGTTATCTAGCTATATG................................................................................................. 22 1 1 109.00 109 50 19 9 31
...........................................................TCTTTGGTTGTCTAGCTGTATGA................................................................................................ 23 1 1 106.00 106 87 11 4 4
...........................................................TCTTTGGTTATCTAGCTGTACGA................................................................................................ 23 1 1 101.00 101 77 10 6 8
...........................................................TCTCTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 100.00 100 62 21 12 5
.............................................................TTTGGTTATCTAGCTGTAT.................................................................................................. 19 0 1 97.00 97 16 5 57 19
...........................................................TCTTTGGTTATCTAGCTGTATAA................................................................................................ 23 1 1 97.00 97 40 6 29 22
...........................................................TCTTTGGTTATCTAGCAGTATG................................................................................................. 22 1 1 97.00 97 83 8 1 5
...........................................................TCTTTGGTTATCTTGCTGTATG................................................................................................. 22 1 1 96.00 96 69 10 14 3
...........................................................TCTTTGATTATCTAGCTGTATG................................................................................................. 22 1 1 95.00 95 47 11 2 35
...........................................................TCTTTGGTTATCTAGCTTTATGA................................................................................................ 23 1 1 94.00 94 67 12 11 4
...........................................................TCTTTCGTTATCTAGCTGTATGA................................................................................................ 23 1 1 93.00 93 42 10 33 8
...........................................................TCTTTGGTTATCTAGCTGTAGGA................................................................................................ 23 1 1 90.00 90 1 0 88 1
...........................................................TCTTTGGTTAACTAGCTGTATG................................................................................................. 22 1 1 89.00 89 71 2 4 12
..................................................................................................TAAAGCTAGCTTACCGAAGTTAT......................................................... 23 1 1 89.00 89 44 6 0 39
...........................................................TCTTTGCTTATCTAGCTGTATG................................................................................................. 22 1 1 89.00 89 41 25 4 19
...........................................................TCTTTGGTTATCTTGCTGTATGA................................................................................................ 23 1 1 89.00 89 72 6 10 1
...........................................................TCTTTGGTTATCTAGCAGTATGA................................................................................................ 23 1 1 86.00 86 82 4 0 0
...........................................................ACTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 85.00 85 33 5 29 18
...........................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................. 21 1 1 85.00 85 13 4 66 2
...........................................................TCTTTGGTTATCTAGATGTATGA................................................................................................ 23 1 1 81.00 81 64 7 0 10
...........................................................TCTTTGGTTATCTAGCTGCAT.................................................................................................. 21 1 1 80.00 80 3 66 6 5
...........................................................TCTTTGGTTATCTAACTGTATGA................................................................................................ 23 1 1 77.00 77 61 8 8 0
...........................................................TCTTTAGTTATCTAGCTGTATGA................................................................................................ 23 1 1 77.00 77 48 5 8 16
...........................................................TCTTTGGTTATATAGCTGTATG................................................................................................. 22 1 1 77.00 77 44 15 2 16
...........................................................GCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 75.00 75 26 5 30 14
...........................................................TCTTTGGTTATCTAGCTGAAT.................................................................................................. 21 1 1 70.00 70 0 56 1 13
...........................................................TCTTTGGTTATCTAGCTCTATGA................................................................................................ 23 1 1 68.00 68 42 9 11 6
...........................................................TCTTTGGTTATCTAGCTATATGA................................................................................................ 23 1 1 68.00 68 44 6 8 10
...........................................................TCTTTGGCTATCTAGCTGTAT.................................................................................................. 21 1 1 66.00 66 6 9 48 3
...........................................................ACTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 65.00 65 17 1 46 1
...........................................................TCTTTGGTTATCTCGCTGTATGA................................................................................................ 23 1 1 64.00 64 53 5 1 5
...........................................................TCTTTGGTTATCTAGCTGTATGAG............................................................................................... 24 0 1 63.00 63 38 5 8 12
...........................................................TCTTTGGTTATCTAGCTGTTTG................................................................................................. 22 1 1 63.00 63 51 3 3 6
...........................................................TATTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 61.00 61 18 8 2 33
...........................................................TCTTTGGTTATCTAGCTGGAT.................................................................................................. 21 1 1 60.00 60 0 23 36 1
...........................................................TCTTTGGTTAACTAGCTGTATGA................................................................................................ 23 1 1 59.00 59 45 5 6 3
...........................................................TCTTTGGTTCTCTAGCTGTATG................................................................................................. 22 1 1 59.00 59 34 14 2 9
...........................................................TCTTTGGTTATCAAGCTGTATG................................................................................................. 22 1 1 59.00 59 53 4 1 1
...........................................................TCTTTGGTTATTTAGCTGTAT.................................................................................................. 21 1 1 57.00 57 9 3 44 1
...........................................................TCTTTGGATATCTAGCTGTATG................................................................................................. 22 1 1 57.00 57 14 5 10 28
...........................................................GCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 56.00 56 20 3 26 7
.............................................................TCTTGTTATCTAGCTGTATGA................................................................................................ 21 2 1 55.00 55 29 4 15 7
...........................................................TCTTTGCTTATCTAGCTGTATGA................................................................................................ 23 1 1 55.00 55 38 9 2 6
...........................................................TCTTTGGTAATCTAGCTGTATG................................................................................................. 22 1 1 54.00 54 37 2 2 13
...........................................................TCTTTGTTTATCTAGCTGTAT.................................................................................................. 21 1 1 54.00 54 5 2 46 1
...........................................................TCTTTGGTGATTTAGCTGTAT.................................................................................................. 21 2 1 53.00 53 41 5 4 3
..............................................................TTGGTTATCTAGCTGTATG................................................................................................. 19 0 1 53.00 53 28 4 15 6
...................................................................................................AAAGCTAGCTTACCGAAGTTA.......................................................... 21 0 1 51.00 51 12 2 35 2
...........................................................TCTTTGGTTATCAAGCTGTATGA................................................................................................ 23 1 1 48.00 48 41 3 3 1
...........................................................TCTTTGGTTATCTAGCTG..................................................................................................... 18 0 1 48.00 48 21 0 1 26
...........................................................TCTTTTGTTATCTAGCTGTAT.................................................................................................. 21 1 1 46.00 46 4 4 31 7
...........................................................CCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 46.00 46 5 9 28 4
............................................................CTTTGGTTATCTAGCTGTA................................................................................................... 19 0 1 44.00 44 0 1 43 0
...........................................................TCTTTGGTTATATAGCTGTATGA................................................................................................ 23 1 1 44.00 44 33 2 2 7
...........................................................TGTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 43.00 43 5 3 33 2
...........................................................TCTTTGGATATCTAGCTGTATGA................................................................................................ 23 1 1 41.00 41 18 5 9 9
...........................................................TCTTTGGTTATCTACCTGTAT.................................................................................................. 21 1 1 41.00 41 9 3 24 5
...........................................................TCTTTGGTTATCTAGCTGTATCA................................................................................................ 23 1 1 40.00 40 28 8 1 3
..................................................................................................TAAAGCTAGCTTACTGAAGTTA.......................................................... 22 1 1 40.00 40 39 0 1 0
...........................................................TCTTTGATTATCTAGCTGTATGA................................................................................................ 23 1 1 40.00 40 23 2 3 12
...........................................................TCTTTGGTAATCTAGCTGTATGA................................................................................................ 23 1 1 39.00 39 28 1 3 7
...........................................................TCTTTCGTTATCTAGCTGTAT.................................................................................................. 21 1 1 39.00 39 1 5 30 3
...........................................................TTTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 39.00 39 14 2 21 2
...........................................................TCTTTGGTTATCTAGCTGTTTGA................................................................................................ 23 1 1 38.00 38 31 2 3 2
..............................................................TTGGTTATCTAGCTGTATGA................................................................................................ 20 0 1 38.00 38 20 2 14 2
...........................................................TCTTTGGTTATCTAGCTAT.................................................................................................... 19 1 1 38.00 38 7 8 17 6
...........................................................TCTTTGGGTATCTAGCTGTATG................................................................................................. 22 1 1 38.00 38 13 7 13 5
...........................................................TCTTTGGTTATCTAGCTGTATGTT............................................................................................... 24 2 1 36.00 36 3 13 4 16
...........................................................TCTTTGGTTATCTAGCTGTCTGA................................................................................................ 23 1 1 36.00 36 20 10 0 6
...................................................................................................AAAGCTAGCTTACCGAAGTT........................................................... 20 0 1 36.00 36 8 2 23 3
...........................................................TCTATGGTTATCTAGCTGTATG................................................................................................. 22 1 1 35.00 35 12 4 7 12
..................................................................................................TAAAGCTAGCTTACCGAAGTTT.......................................................... 22 1 1 35.00 35 3 10 4 18
...........................................................TATTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 34.00 34 13 3 4 14
...........................................................TGTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 34.00 34 5 5 23 1
...................................................................................................TAAGCTAGCTTACCGAAGTTA.......................................................... 21 1 1 33.00 33 30 0 1 2
...........................................................TCTTTGGTTATCTAGTTGTAT.................................................................................................. 21 1 1 32.00 32 8 3 18 3
............................................................CTTTGGTTATCTAGCTGTATGT................................................................................................ 22 1 1 32.00 32 0 0 32 0
...........................................................TCCTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 31.00 31 10 9 7 5
...........................................................TCATTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 31.00 31 16 3 1 11
............................................................TTTTGGTTATCTAGCTGTATG................................................................................................. 21 1 1 31.00 31 20 6 3 2
............................................................TCTTGGTTATCTAGCTGTAT.................................................................................................. 20 2 1 31.00 31 15 8 6 2
..................................................................................................TAAAGCTAGTTTACCGAAGTTA.......................................................... 22 1 1 31.00 31 28 1 1 1
...........................................................ACTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 30.00 30 0 2 23 5
...........................................................TCTTTGGTTATCTAGCTGTAAG................................................................................................. 22 1 1 30.00 30 9 3 0 18
...........................................................TCTTTGGTTCTCTAGCTGTATGA................................................................................................ 23 1 1 30.00 30 22 6 1 1
...........................................................TCTTCGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 30.00 30 3 4 22 1
...........................................................TCTTTGGTTATCTAGCGGTATG................................................................................................. 22 1 1 30.00 30 15 2 10 3
...........................................................TCGTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 29.00 29 7 5 14 3
...........................................................GCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 29.00 29 1 2 24 2
............................................................TTTTGGTTATCTAGCTGTATGA................................................................................................ 22 1 1 29.00 29 25 2 2 0
..........................................................CTCTTTGGTTATCTAGCTGTAT.................................................................................................. 22 1 1 29.00 29 6 3 14 6
...........................................................TCTTTGGTTACCTAGCTGTAT.................................................................................................. 21 1 1 28.00 28 2 9 10 7
...........................................................TCTTTGGTTATCTAGGTGTATG................................................................................................. 22 1 1 28.00 28 19 5 2 2
...........................................................TCTTTGGTTTTCTAGCTGTATG................................................................................................. 22 1 1 27.00 27 19 4 1 3
...........................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................. 21 1 1 26.00 26 6 8 4 8
...........................................................TCTTAGGTTATCTAGCTGTATG................................................................................................. 22 1 1 26.00 26 17 2 1 6
..................................................................................................TAAAGTTAGCTTACCGAAGTTA.......................................................... 22 1 1 26.00 26 25 0 1 0
.............................................................TCTTGTTATCTAGCTGTATG................................................................................................. 20 2 3 25.33 76 49 11 12 4
...........................................................TCTTTGGTTATCTAGCTTTAT.................................................................................................. 21 1 1 24.00 24 3 5 11 5
............................................................CTTTGGTTATCTAGCTGTATT................................................................................................. 21 1 1 24.00 24 0 0 24 0
...........................................................TCTTTGGTTATCTAGCCGTAT.................................................................................................. 21 1 1 24.00 24 5 10 7 2
...........................................................TCTTTGGTTATGTAGCTGTATG................................................................................................. 22 1 1 23.00 23 15 4 2 2
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAT......................................................... 24 1 1 22.00 22 12 1 0 9
...........................................................TCTATGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 22.00 22 6 4 9 3
...........................................................TGTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 21.00 21 0 0 19 2
...........................................................TCTTTAGTTATCTAGCTGTAT.................................................................................................. 21 1 1 21.00 21 1 6 10 4
...........................................................TCTTTGGTTATCTGGCTGTAT.................................................................................................. 21 1 1 21.00 21 6 6 8 1
...........................................................TCTTTGGTTATCTAGCTGTGT.................................................................................................. 21 1 1 21.00 21 5 6 8 2
.................................................................................................ATAAAGCTAGCTTACCGAA.............................................................. 19 0 1 20.00 20 4 2 0 14
...........................................................TCTTTGGTTGTCTAGCTGTAT.................................................................................................. 21 1 1 20.00 20 4 4 9 3
...........................................................TCTTTGGTTATCCAGCTGTAT.................................................................................................. 21 1 1 19.00 19 9 7 3 0
.................................................................................................ATAAAGCTAGCTTACCGA............................................................... 18 0 1 19.00 19 6 2 0 11
...........................................................TCTTTGGTTATCTAGGTGTATGA................................................................................................ 23 1 1 19.00 19 17 1 0 1
...........................................................TCGTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 19.00 19 8 1 9 1
..................................................................................................TAAAGCTAGCCTACCGAAGTTA.......................................................... 22 1 1 19.00 19 15 1 0 3
..................................................................................................TAAAGCTAGCTTACCGAATTT........................................................... 21 1 1 19.00 19 4 9 5 1
...........................................................TCTTTGGTTATCTAGCTGTATGAAAA............................................................................................. 26 3 1 18.00 18 10 3 3 2
...........................................................TCTCTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 18.00 18 2 3 9 4
...............................................................TGGTTATCTAGCTGTATG................................................................................................. 18 0 1 18.00 18 10 2 5 1
...........................................................TCTTTGGTTAGCTAGCTGTATG................................................................................................. 22 1 1 18.00 18 9 3 0 6
..................................................................................................TAAAGCTAGCTTACCGAAGTTAC......................................................... 23 1 1 17.00 17 15 0 0 2
...........................................................TCTTTGGTTATCTAGATGTAT.................................................................................................. 21 1 1 17.00 17 7 5 2 3
..................................................................................................TAAAGCTAGCTTACCTAAGTTA.......................................................... 22 1 1 17.00 17 9 1 2 5
...........................................................TCTTTGGGTATCTAGCTGTATGA................................................................................................ 23 1 1 16.00 16 9 2 5 0
............................................................CTTTGGTTATCTAGCTGTATTA................................................................................................ 22 1 1 16.00 16 0 0 16 0
...........................................................TCTTTGGTTATCTAACTGTAT.................................................................................................. 21 1 1 16.00 16 3 3 9 1
...........................................................TCTTTGGTTATCTAGCGGTATGA................................................................................................ 23 1 1 16.00 16 7 0 9 0
..................................................................................................TAAAGCTAGCTTACCGAGGTTA.......................................................... 22 1 1 16.00 16 13 0 0 3
.................................................................................................ATAAAGCTAGCTTACCGAAGTTT.......................................................... 23 1 1 16.00 16 1 8 3 4
............................................................CTTTGGTTATCTAGCTGTATGAA............................................................................................... 23 1 1 15.00 15 0 0 14 1
..................................................................................................TAAAGCTAGCTTACCGAATTTA.......................................................... 22 1 1 15.00 15 4 6 2 3
..................................................................................................TAAAGCTAGCTTACCGAAATT........................................................... 21 1 1 15.00 15 0 9 0 6
...........................................................TCATTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 14.00 14 10 1 2 1
...........................................................TCTTTGCTTATCTAGCTGTAT.................................................................................................. 21 1 1 14.00 14 1 7 4 2
..................................................................................................TAAAGCCAGCTTACCGAAGTTA.......................................................... 22 1 1 14.00 14 10 1 0 3
...........................................................TCTTTGGTTATCTAGCTGTATGAAT.............................................................................................. 25 1 1 14.00 14 3 4 2 5
...............................................................TGGTTATCTAGCTGTATGA................................................................................................ 19 0 1 14.00 14 9 2 2 1
...........................................................TCTTTGGTTATCTAGCTGA.................................................................................................... 19 1 1 14.00 14 4 0 3 7
............................................................CTTTGGTTATCTAGCTGT.................................................................................................... 18 0 1 14.00 14 0 0 14 0
...........................................................TCGTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 13.00 13 0 1 12 0
...........................................................TCTTTGGTTTTCTAGCTGTATGA................................................................................................ 23 1 1 13.00 13 10 0 2 1
...........................................................TCTTTGGTTATCTAGCTGTAAGA................................................................................................ 23 1 1 13.00 13 9 2 1 1
...........................................................TCTTTGGTTATCTAGCTCTAT.................................................................................................. 21 1 1 13.00 13 0 6 6 1
.................................................................................................ATAAAGCTAGCTTACCGACGTT........................................................... 22 1 1 13.00 13 0 12 0 1
.................................................................................................CTAAAGCTAGCTTACCGAAGTTA.......................................................... 23 1 1 13.00 13 10 0 1 2
...........................................................TCTTTGGTTATCTAGCTGTCT.................................................................................................. 21 1 1 13.00 13 3 3 2 5
...........................................................TCTTTGGTTATCTAGCTGTATGTA............................................................................................... 24 2 1 12.00 12 1 0 10 1
..........................................................ATCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 12.00 12 0 0 12 0
..................................................................................................TAAAGCTAGCTTACCGAA.............................................................. 18 0 1 12.00 12 9 1 0 2
...........................................................TCTTTGGTTATCTAGCTGTTT.................................................................................................. 21 1 1 12.00 12 1 5 5 1
..................................................................................................TAAAGCTAGCTTACCAAAGTTA.......................................................... 22 1 1 12.00 12 9 2 1 0
...........................................................TCTTTGGTTATCTAGCTGTAAA................................................................................................. 22 2 1 12.00 12 0 4 2 6
...........................................................TCTTTGGGTATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 0 3 9 0
..................................................................................................TAAAGCTAGCTTATCGAAGTTA.......................................................... 22 1 1 12.00 12 12 0 0 0
...........................................................TCTTTGATTATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 0 4 5 3
...........................................................TCTTAGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 11.00 11 8 0 0 3
..............................................................TTGGTTATCTAGCTGTAT.................................................................................................. 18 0 1 11.00 11 1 0 9 1
...........................................................TCTTTGGTAATCTAGCTGTAT.................................................................................................. 21 1 1 11.00 11 5 0 1 5
...........................................................TCTTTGGTTATCGAGCTGTATG................................................................................................. 22 1 1 11.00 11 0 4 6 1
..................................................................................................TAAAGCTAGCTCACCGAAGTTA.......................................................... 22 1 1 11.00 11 4 1 1 5
...........................................................TCTTTGGATATCTAGCTGTAT.................................................................................................. 21 1 1 11.00 11 2 2 4 3
..................................................................................................CAAAGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 11.00 11 7 3 0 1
.............................................................TCTGGTTATCTAGCTGTATGA................................................................................................ 21 1 1 11.00 11 10 1 0 0
...........................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................ 23 2 1 11.00 11 0 5 5 1
...........................................................TCTTTGGTTATCTAGCTGTATGATT.............................................................................................. 25 1 1 11.00 11 2 4 2 3
..................................................................................................TAAACCTAGCTTACCGAAGTTA.......................................................... 22 1 1 11.00 11 6 2 1 2
..................................................................................................TAAAGCTAGCTTACCTAAGTT........................................................... 21 1 1 11.00 11 2 2 1 6
..................................................................................................TAAAGCTGGCTTACCGAAGTTA.......................................................... 22 1 1 10.00 10 7 0 1 2
..................................................................................................TAAATCTAGCTTACCGAAGTTA.......................................................... 22 1 1 10.00 10 8 0 2 0
...........................................................TTTTTGGTTATCTAGCTGTATGAA............................................................................................... 24 2 1 10.00 10 9 1 0 0
..........................................................TTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 10.00 10 0 0 10 0
...........................................................TCTTTGGTTATCTAGCTATAT.................................................................................................. 21 1 1 10.00 10 2 2 3 3
...........................................................TCTTTGGTTAACTAGCTGTAT.................................................................................................. 21 1 1 10.00 10 4 0 4 2
...........................................................TCTTTGGTTATCTAGCTGTGA.................................................................................................. 21 2 1 10.00 10 8 2 0 0
..................................................................................................TAAGGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 10.00 10 8 1 0 1
...........................................................TCTTTGGTTATCTAGCTGTAGA................................................................................................. 22 2 2 10.00 20 14 0 4 2
...........................................................TCTGTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 10.00 10 2 4 1 3
..................................................................................................TAAAGCTACCTTACCGAAGTTA.......................................................... 22 1 1 10.00 10 8 0 0 2
..................................................................................................TGAAGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 9.00 9 8 0 0 1
..................................................................................................ATAAGCTAGCTTACCGAAGTTA.......................................................... 22 2 1 9.00 9 9 0 0 0
...........................................................TCTTGGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 9.00 9 4 4 0 1
...........................................................TCTTTGGTTATATAGCTGTAT.................................................................................................. 21 1 1 9.00 9 0 1 3 5
..................................................................................................TAAAGCTAGCTTACCGCAGTTA.......................................................... 22 1 1 9.00 9 8 0 0 1
...........................................................TCTTTTTTTATCTAGCTGTATG................................................................................................. 22 2 1 9.00 9 4 0 5 0
...........................................................TCTTTGGTTATCTAGCTGTATGAAC.............................................................................................. 25 2 1 9.00 9 5 2 1 1
....................................................................................................AAGCTAGCTTACCGAAGTTA.......................................................... 20 0 1 9.00 9 6 1 2 0
..........................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 0 1 9.00 9 0 0 9 0
...........................................................TCTTGGGTTATCTAGCTGTATG................................................................................................. 22 1 1 9.00 9 3 2 0 4
.................................................................................................ATAAAGCTAGCTTACCAAAGTT........................................................... 22 1 1 9.00 9 0 3 1 5
..........................................................TTCTTTGGTTATCTAGCTGTAT.................................................................................................. 22 1 1 9.00 9 0 0 9 0
..........................................................GTCTTTGGTTATCTAGCTGTAT.................................................................................................. 22 0 1 9.00 9 0 0 9 0
..........................................................GTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 0 1 9.00 9 0 0 9 0
..................................................................................................TAAAGCTAGCTTACCGATGTTA.......................................................... 22 1 1 9.00 9 8 0 0 1
.................................................................................................ATAAAGCTAGCTTATCGAAGTTA.......................................................... 23 1 1 9.00 9 8 0 1 0
..................................................................................................TAAAGCTAGCTTACCGAACTT........................................................... 21 1 1 9.00 9 2 7 0 0
...........................................................TCTGTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 9.00 9 5 2 2 0
..................................................................................................TAAAGCTAGCTTACCGAACTTA.......................................................... 22 1 1 9.00 9 5 3 0 1
...........................................................TCTTTGGTCATCTAGCTGTAT.................................................................................................. 21 1 1 9.00 9 2 7 0 0
...........................................................TCTTTGGTTATCTTGCTGTAT.................................................................................................. 21 1 1 9.00 9 0 2 7 0
...........................................................TCTTTGGTTATCTAGCTGTATGAAG.............................................................................................. 25 2 1 9.00 9 3 1 1 4
..................................................................................................TAAAGCTAGCTTGCCGAAGTTA.......................................................... 22 1 1 9.00 9 9 0 0 0
...........................................................TCTTTGGTTATCTAGTTGTATGAA............................................................................................... 24 2 1 9.00 9 8 0 1 0
...........................................................TCTTTGGTTATCTAGCTGTTG.................................................................................................. 21 2 1 9.00 9 6 1 2 0
..................................................................................................TAAAGCTATCTTACCGAAGTTA.......................................................... 22 1 1 8.00 8 6 0 1 1
...........................................................TCTTTGGTTATCTAGCTGTATGTAA.............................................................................................. 25 3 1 8.00 8 0 1 2 5
............................................................CTTTGGTTATCTAGCTGTATGAT............................................................................................... 23 1 1 8.00 8 1 1 6 0

Anti-sense strand reads

AAGGGAAAGTTGGTAGACGTCACAATGTTTTGGCCGAGATATATGTCCCACGATACAACAGAAACCAATAGATCGACATACTCACTATTTATTGCAGTATTTCGATCGAATGGCTTCAATTATAATCGCAGACTGGTCGCTTTGTCGGTTTTTGCTTCGGGTGTAACGCATACGAATT

*******************************************((((..(((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).)))).))))..******************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V115

head

 V113

male body
...................ACACAATGTGTTGGCCGAGACA......................................................................................................................................... 22 3 2 0.50 1 1 0 0
...........................................................AGAAACCAACAGATCGAAATA.................................................................................................. 21 2 2 0.50 1 0 1 0
...............................................................................................AGTATTTCGATCTCTTGGCTTC............................................................. 22 3 3 0.33 1 1 0 0
.........................................................................................................TCGAATGGGTTGAAGTATAA..................................................... 20 3 10 0.10 1 0 0 1
.......................................................................................................................TTGAAATTGCAGACTGGTC........................................ 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_29:261334-261511 + dse-mir-9a Known_mirbase TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-AAACCGGCTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTAT-------------GC----TTAA
droSim2 3l:19208452-19208629 + dsi-mir-9a Known_mirbase TTCCCT-----TT---CAACCATTTGC------------------------------AGTGTTACA-CAACCGGCTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTAT-------------AC----TTAA
dm3 chr3L:19558181-19558358 + dme-mir-9a Known_mirbase TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-CAATCGACTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCAGCGAGACAG-CC-AAAAACGAGGCCCACATTGCGTAT-------------AC----TTAA
droEre2 scaffold_4784:19355629-19355804 + der-mir-9a Known_mirbase TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-TAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACAAAGCCCACGTTGCGTAT-------------AC----TTAA
droYak3 3L:20989367-20989542 - dya-mir-9a-1 Known_mirbase TTCCCT-----TT---CAACCATCCGC------------------------------AGTGTTACA-CAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTAT-------------AC----TTAA
droEug1 scf7180000409472:104871-105046 + TTCCCT-----TT---CAACAATTCGC------------------------------GGCGTTATG-CAATCTACTA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCAGCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTAT-------------AC----TGAA
droBia1 scf7180000302377:2053585-2053756 - TTCCCT-----TT---CAGCGGTTCCC------------------------------AGTGTTATG-CAATCGACTC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-G----CGAAACCCACATTGCTCGT-------------AC----TGAA
droTak1 scf7180000415276:67404-67578 + TTCCCT-----TT---CAGCAATTCAC------------------------------AGTGTTATA-TAATCGACTT--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACAA-CC-GAAAA-GAAGCACACGTTGCGTAT-------------AC----TCAA
droEle1 scf7180000491249:6854970-6855146 + TTCCCT-----TT---CAACAATTCGC------------------------------AGTGTTATA-TAATCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAGCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTAT-------------AC----CGAA
droRho1 scf7180000779964:5256-5432 + TTCCCT-----TT---CAACAATTCCA------------------------------AGTGTTATA-TAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAGCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTAT-------------AC----TTAA
droFic1 scf7180000453831:108841-109020 + TTCGCT-----TT---CGACAATTGCC------------------------------AGTGTTACA-CAATCCCATC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACGG-CC-AAAAAGGAAACCCACGTTGCCTAT-------------GCCAAGCCAG
droKik1 scf7180000302694:81663-81803 + TTCCCT-----TT---CAGCAATGCCG------------------------------AGTGTTACA-CAATCAACTC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAA------------------------------------------------------
droAna3 scaffold_13337:17332387-17332567 - dan-mir-9a Known_mirbase TTCCCT-----TT---T---------------------------------------------------------TTTCAAACAATACTCCCACAAATCTTATATAACACT--AT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACAGTCCAAAAAAGGAAACCCACATTGCGTAT-------------AC----TCAA
droBip1 scf7180000396741:632306-632486 - TTCCCT-----TT---T---------------------------------------------------------TTTCAAACAATACTCCCACAAATCTTATACAACACT--AT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTAT-------------AC----TCAA
dp5 XR_group8:7634778-7634961 + dps-mir-9a Known_mirbase ATCGTT-----CC---CATCGATAG-----------------------------AATGGTGTAATT-TAAAGTTCTT--------------------------------C--AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACCG--------AAGAAACCCACGTTACGTACTGCGAGCCAACATAG----CCAA
droPer2 scaffold_48:412918-413097 + dpe-mir-9a Known_mirbase ATCGTT-----CC---CA----TCGGT-------------------------AGAATGGTGTAATT-TAAAGTTCTT--------------------------------C--AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAAC----C-AA---AGAAACCCACGTTACGTACTGCGAC----CATAG----CCAA
droWil2 scf2_1100000004540:842183-842319 + dwi-mir-9a Known_mirbase ATCAAT-----ATGATGAACAATCGAA------------------------------AATGTTGTGACCCTCG--CA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCA------------------------------------------------------------
droVir3 scaffold_13049:13136981-13137133 + dvi-mir-9a Known_mirbase ATTA-----A-----------------GGCGAAACACAGCTAACGACCAGCC-----A------------------G--------------------------------G--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAACGTA-------------------CCACAGCGCGTAT-------------AC----TTAA
droMoj3 scaffold_6680:14226478-14226636 - dmo-mir-9a Known_mirbase --------------------CAATTGCAGAGAGTCAA--------------------AGCGACAGC-CAATGGG-AA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAGCGTAACAA----------------CACAGTGCGTAT-------------AC----TTAA
droGri2 scaffold_15110:23882682-23882843 + dgr-mir-9a Known_mirbase TGCATATTAAAACGAGCAACAAGCAGA-----------------AAGCAAATAGGATTGTGCAAGT-T--TGTGCCG--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCAACGTAACA----------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-AAACCGGCTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTAT-------------GC----TTAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221235175.00235175159954970813400535467
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231134949.001349491820717385899219436
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21133076.003307616283784840694876
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2219922.00992258262468571859
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2114781.004781266131413411860
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2213539.00353927812367591266
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2312709.0027092882111758452
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2011866.001866778527170391
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2411819.001819306373869271
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2211498.00149813591411312
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111239.0012391086369720
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2011197.0011971188252
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2311138.001138439277261161
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231837.008371146547233
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201749.007495939544107
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191672.0067227141120240
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211483.00483762035829
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241441.004417810121250
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251391.003913098163100
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................221359.00359157894667
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211356.0035696995156
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................231253.00253271514170
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201243.0024354711180
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221214.0021436468646
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241206.0020631514741
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201196.001966752293
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211190.0019015841477
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231152.0015213249421
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201145.001455749039
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221134.0013414296922
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241131.001311679414
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................191130.001305811106
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19197.00975751619
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23189.0089064439
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21185.0085664132
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24163.0063853812
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19153.0053154286
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21151.0051352122
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18148.0048102126
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19144.004443100
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20138.0038142202
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24136.0036413316
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20136.003623283
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22135.0035410318
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22132.003232000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................21126.00264868
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21124.002424000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT............................................................................24122.002201129
........................................................................................................................................................................ATAAAGCTAGCTTACCGAA.................................................................................19120.002002414
........................................................................................................................................................................ATAAAGCTAGCTTACCGA..................................................................................18119.001902611
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA................................................................................................................26118.001833102
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18118.001852101
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC............................................................................23117.001700152
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................23116.00163814
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23115.001514001
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19114.00142291
..................................................................................................................................TCTTTGGTTATCTAGCTGA.......................................................................................................................19114.00143047
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................18114.001414000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24112.001210011
.........................................................................................................................................................................TAAAGCTAGCTTACCGAA.................................................................................18112.00120192
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAA....................................................................................................................22112.00122406
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18111.00119011
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23111.00115501
..................................................................................................................................TCTTTGGTTATCTAGCTGTGA.....................................................................................................................21110.00100280
..................................................................................................................................TCTTTGGTTATCTAGCTGTAGA....................................................................................................................22210.002040142
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.................................................................................................................2519.0091251
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.............................................................................2019.0092160
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................2419.0099000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.....................................................................................................................2219.0099000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................2319.0099000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.................................................................................................................2519.0091134
..................................................................................................................................TCTTTGGTTATCTAGCTGTTG.....................................................................................................................2119.0092160
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTAA.................................................................................................................2518.0082105
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..................................................................................................................2318.0086110
droSim2
TTCCCT-----TT---CAACCATTTGC------------------------------AGTGTTACA-CAACCGGCTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231379049.0037904939411185541406661179819446218923479758566419010021390127754235193
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221162934.00162934159788255294608013104250200418952255518575205552148354101440
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21170900.0070900302091076365078383111232503079103712466488902288102
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................23146036.00460366510428535126130033241215701001
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................20114374.00143744403167844443137471638461423694216138164234
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2415310.005310933492146526500243995388381792374917
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2213103.00310312440176150523107316385251825016010
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................1812566.00256642311930534681153211163200121741
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2312401.002401104246734718800122394102311409000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2212212.0022123741259920039351159100000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................2112186.002186157836323850010100000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................2312074.002074726183103520005342915900000
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................1911931.001931107334268686813431946886401029
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................2511649.0016494592694433300156268104040010101
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2111517.001517281919643174553456293451105000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................2411100.00110032416331446006181248112102000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................221918.009181364375931503323001200002
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241765.007651775441260012433603102010
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................231657.0065764105279621018219375020000
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................201627.00627420540175503240000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................211534.0053482145418072804201000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................221516.00516545461115178584124705000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................211480.0048024213265380000000300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211399.003992188115900922800100000
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201366.0036628074390000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231335.003353138111067130102000
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211331.00331922925008231017705303001
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221300.003001302830350046141004300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241256.00256141871430031420100000
..................................................................................................................................TCTTTGGTTATCTAGCTGG.......................................................................................................................191247.00247149811600000000100000
..................................................................................................................................TCTTTGGTTATCTAGCTGC.......................................................................................................................191237.00237174441810000000000000
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201205.002050132000432313013700010
..................................................................................................................................TCTTTGGTTATCTAGCT.........................................................................................................................171165.0016500000003155000193993
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221143.0014318833000134010300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................241133.00133361142323101890800000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA................................................................................................................261132.00132413022300112590000000
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20193.0093623380004111811000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................24186.0086010000000207804010
..................................................................................................................................TCTTTGGTTATCTAGCTGTG......................................................................................................................20183.008318204320000000000000
..................................................................................................................................TCTTTGGTTATCTAG...........................................................................................................................15175.007500000022212320042514
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.................................................................................................................25165.00651443800000340200000
..................................................................................................................................TCTTTGGTTATCTAGCTGA.......................................................................................................................19161.00615010010000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24157.00572921410000010100000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................20154.0054530452520531100000
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19149.004910022111500000000000
..................................................................................................................................TCTTTGGTTATCTAGC..........................................................................................................................16144.0044000000003910034618
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19141.0041110352700000400000
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19139.00391312152001230000000
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19138.0038004300011651800000
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................18137.00372311000004132200000
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20136.0036000000000003600000
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19133.00330020001110144100000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.................................................................................................................25130.0030561300000310200000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGACA.................................................................................................................25128.00281331000000000200000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23127.002776040003000700000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGCA..................................................................................................................24125.002594910010000100000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23125.0025000000000002500000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23122.0022200200000000000000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21121.0021301110200000400000
..........................................................................................................................................TATCTAGCTGTATGA...................................................................................................................15121.0021000000005151000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTC......................................................................................................................20120.0020181000000010000000
........................................................................................................................................GTTATCTAGCTGTATGA...................................................................................................................17120.002000000006770000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22119.0019000180000000001000
.........................................................................................................................................TTATCTAGCTGTATGA...................................................................................................................16118.0018000000001431000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAA....................................................................................................................22117.001795030000000000000
.........................................................................................................................................TTATCTAGCTGTATG....................................................................................................................15116.0016000000101122000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGG...................................................................................................................22115.0015101310000000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................21115.001521131000121300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGATA.................................................................................................................25115.001551310001200200000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................23114.0014100000010001200000
....................................................................................................................................TTTGGTTATCTAGCTGTATGATC.................................................................................................................23114.0014201100000000001000
..................................................................................................................................TCTTTGGTTATCTAGCTGTGG.....................................................................................................................21113.001363400000000000000
dm3
TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-CAATCGACTC--------------------------------TATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCAGCGAGACAG-CC-AAAAACGAGGCCCACATTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................2211191976.001191976000080348361201881051799905000281017284583660065320120151254531142625154671097813536648521665195123198621898722189470003427180000000000000000000009273728820721987962946367536153024635911424163841261223130305932671651641027520816319312088101975761010634651916110328470776666529894610321752143135201227114141301387353764441036539010817522819513830021062041481000002221186030364366488903652592411613600164276313542252465307119015401530420439217186643589144045572055302691000010824901147055233388230736283541318347381100223961424254200014600414742984316328297412941035721176651481021020384035300122001312211422123857617373561562333982168011529952341481835820266684161116442091115249348117931175714202585442991655452663124121744152921724308602160911345056513953674574215344991142024354781700000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231620044.0062004400001596231329693513292485310010015880913280138602421292144464455971421170242925401036321041115141812872371075726000167121760000000000000000000101134796783185759900555162610641697501258310933916113689623133892106697925927462055646220140262164240375840672086211441882794163137391657671435116419521793556218813006111824300309203841736459411477769553899240917636000111550152181639484069973113135165061655054100786270992461010401400441918282662353203200134373003252011699870057413552191068839851101110101298325269621827311426300017011300290542024618149022666841155054263010277810100198811100150024013002006422076851586711395560222288826104896496623877969736541067574641822264799354998551257521549218010067475987652131313723240991227896146393645858469245492300512
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................211302390.0030239000002066006383730813505710475073542414680303564121485751611432701515214810547384161512226254857233384900058951315700000000000000000321226815779521343111720330393642396451120810361588371095513933604163987025621121744393072021566166464886834478297735298825259918837853001000015198330472396332452483113768641108530799129000100870130102731226006997208303059851405257721236912192662431107001183212974314916900012094470120000039720030072230153669116764356355210432249309677426100710030000570828890925158450327188728154138101110625103010020172310029779629686425210511906780240611624011384895099044070614343673579173698326593251434746722377472060237535443801301007311434541149207252145933902414278120010016
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................22131270.003127000001142274337141180920400342512401016186769865449416523212321118745102610500010000000000000000000000152063341838011001739762531483220931115152384147520813111273914960071324084179171361571283283512360000001000578138030925546441213413150000000010099511000753561827875174764217238513563318000069224329213150002200211000000161000000000079440256228371759447700001090080811780208312120003243300244000001632000000000400001714514841814118700100145359546047316682011395219051376782232702363081025142500100020000335130956094280171150000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................21126917.00269170000860258013050014001511400303017453223024422634124928231387100000000000000000000000000004149292130012932208144612262350971183005062310111102314137204710715117952761331220712000000000002744991592243231162433000003000005017580447483122734148352193899187128000004961491395160001170132000000030000000001510314515912517113200000000449359112128912002220252020100000195000000000050000171543615730189281190002310681300100212114879434743162883583133866206038160136303802000030020584214110332256364584211100000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.................................................................................................................25119742.00197420000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108788859001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................22118350.001835000001000001110000200002460610000000023814161611048103214314106600000000000000000000000000014517725351304434988623124921201351022421001001971195611701733701817186156000000000016235064738415222219164250012000203200021149009010173712707208759000063141378211008059000000131500000000002398459211240000210027371319199436826002759892053100000253201000000010000433429250000223814813114314727872650105391029410310986140600211000000000009328415830563934000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................22116934.001693400003014242000021100009701012899273110148132001100005011210211000000000000000000000000000004813583140003830471701111910000050000620435264233113191324821260000000000363387862531710000808010000000000046215110284305148311643051161052125911772907000068175302000902700000030000000000617202001111000100000000206109032461001401170640000023000000000100000330314318018000035025047078431528437122690353111767074126002659030000200005501523622117154171165300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................20115365.0015365000010001122402006000119830102206217193472861352144251103507525110002192200000000000000000000079526341001787922724352443207676641211290431117102752058112706218360117531441590015300000008132622025532560400000100000002943980209132922272342217752614312000012880222712000450162000002300000000073798521818234492363200002300128116177943002112196011000000340000010000500009401246113832900002778483436560182180189143126917311320474045881400213147000000000004721441658219402246324100000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................23113924.0013924000010326258176064000000615000676820416118776200110216041002321100000000000000000000000000023076939214731009152778815716352712144100111112212820293602711501352701421311000000000049208564308362123415102100000000000440585026812173492292241758330637646320800000138884451000370510000001200000000020803840117203323000012002562090422950007199065000002600000110001000041921012412100002206154239270248253310650123314147115767019320000102000012747219848613239000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2319160.0091600000510147375010000001133000000000000200020502130321000000000000000000000000000004511061041002517426695531164492828696320112333151312251575021502083618451581070000000010219291011212322100100000000000279233022801361226105114302708000001616110311000570360000000300000502072818101820135794115320000130017893021745001266880570000031000000000000000294207304260000229929418019111818424817508699521250029826900166240000000000025157634783173159179000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2418940.008940000012300815812400002000010000000000004011103020211112101000000000000000000000000000289472291468101074166192292874812625191041251981211539334918118147290700701313195100618756100000000005541013411002025100000000200000300292018600192044114615901691700003511176650002105300000076000000000322454067213125612100025280030823802954100095620500000018001000000000000511510713190000119614810281258366115780231219512344025229000162800000010000110387255571408480000000
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................1916934.006934000000000000001521960031141000972184867151131010113104110131010001162000000000000000000100201410246017224166131014231000101923302016213516190105605275511260110121500000922020301035220000001000000011815305899227920538013031702400000100201514000170680000000000000000515634312151828410000000025360233200005310703900000180000000000000001115151121100000124515919124480779577214268591500122221001281100000020000247694246759590141000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................2313520.0035200000000100212000000000140000000000000000100050007220000000000000000000000000000015119720000350203490300661100001112121314210110412032151844287830000001100371917200010301000000000001042380560023010103200000500400000020000000000000000012730001000000001190080450336200033180130000080000000000000001504170300000252010466177047153011901131650705900001000000000007261461577000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................2412413.0024130000310201150000010000100000000000000010101001001110000000000000000000000000000008424170012526841522132331812432211230312540601513130637080202200000000000714600010080000000000000005974049007440241230350000001528010300050700000011000000000073409214011250000162123006750081710004614013000001000000000000000004013327000018444383329813017039753980699100523000000000003710010723382818000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................2112161.002161000051000336500000000021000000000000000000114020001000000000000000000000000000003111000070110012220010030020000100052342201031529025220210000000000102000100240000000000000005178039001331027061010750000056421100040300000010000001000001831204221200001860052072600001644020000004000000000010000411362905000011441041271390662017241349031610010200000010000372866615253129000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATATC..................................................................................................................2412122.00212200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379743000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................2311973.001973000021000110200000200011000040000000011001003000010100000000000000000000000000201122300010012111220432000103002400219160606944180712000000000044414020000800010000000000054650271031362404420741000000880071000206000000100000000003151111001410000001000013150413900008371069000002400000000001000041002023400001415847534447261708141124020280001010000020000312165421292927000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................2211581.001581000056158153980000000002100000000000000000001010000010000000000000000000000000000022112000208102241100108140000001114010012102062130521070000000000039500000130100000000000002726013506543394280192000003212200005050000000100000000002761500000300001712002428047000011901600000800000000000000001012113000006963284550741017028114263158510011200000000000341187221342629000000
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................2011522.00152200000000000100000000003000006365560110000000001000110100000000000000000000000000000301000010000000300310000000000101000000000102010000000000014727200000900010000000000022034006138081000000000705000060600000000000000000005500170001000000001349106190000813032000003200000001000000002011101000002830231772140970410007014190002100000010000371137728594134000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................2211359.00135900003101111300000100000300000000000000000000003000100000000000000000000000000000111000000012011010004300000100001030511203460717200000000003511120000009100000000000001131701700135030811311000008320111000106000000100000000002111110000000000021170023180350000121501000000800000000001000022130502000001918114571742111024321318005355001100000000000043766326764239000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111322.0013220000200000000000000000000000402318100000000000000000000000001000000000000000000000000186000102002102016205001000002320003000011302110000000000004222001030400000000000000048050022102343031000008207200070300000000000000000114300100111000000004625019000043080000080000000000000000300030000000293311339816218905010018039520003200000010000501626415484430000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................2511296.00129600001100000100000000000000000000000000000000000000100000000000000000000000000000113183514155045321121218681415480141314262713540024032010117050144000000000006185000010300100000006000034380220061501802502800000097111000205000000300000000000254011316120000220018210370001147011000009000000000000000010102000000053262622163511100311044503033002000000000000016584814191416000000
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................2111234.00123400000000000000000000000300024312586100002000110100000010000000000000000000000000000000131100020400210300340000000000220300100000300020000000000003629300000200000000000000050060201084135420190000034010000002000000000000000000000112614120000220010767031000010608000001200000000000000003000011000001314981001158101020160950110000000000000329286945000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................2011210.0012100000110000000000010000150000100000110100000011000000000000000000000000000000000000000000000010010001004100000000000004600010206124000000000001100001007000000000000000932016001373711542570000027521300003000000000100000000007460000000000000000916071300005140700000300000000000000023084306000006277609321427170713104003440010310000000000032135805403624000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................2311182.0011820000202475311000000000130000000000000000000000000000000000000000000000000000000009126130000372233141017188000311111014507037100328140960000000000035710000000000000000000005352044002190613202310000014302000050100000000000000000004500010011000000004623062100011110800000400000000000000002220311000001119179148107281805030290111600110000000000001574203967000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2211145.0011450000001040000000000000110100132738003000001000000000000000221000000000000000000000015053262006822118407031936510000002983000630100260328400000000000870010000300000000000000043240230054632926015000000210040000102000000000000000000011221223210000030033240010000810300000000000000000000005120000000001393913414596030102401014000010000000000010281551193000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAATC...................................................................................................................2311097.0010970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211989.0098900000000000000000000000000010243010000000000000001000000000000000000000000000000100000000000001000001200000000000000420100100000000000000000360000000300000000000000020940661432705361513000007200000020200000000000000000108700000000000000003402610002160600000200000000000000005012405000007244546771411100610111801817001300000000000051170401411147000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241754.007540000000000200000000000100007170000000000000000000001010000000000000000000000000000001020000000010000013120000000003000015010057100010000000000124700000080000000000000002542010583136131912728360000016200000000200000000000000000151100001000000010003709160000143002400000400000000000000000030402000001115141453266301110060123001030000000000013621126310000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTATC...........................................................................241727.007270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000350377000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................211719.0071900000200101310000000000400000000001000000000000010000000000000000000000000000000000000004100010010000000000000001100300001100504300000000000000000000100000000000000026150120038030124018000000016000000000300000000000000000013200000000000000005001200001300000000000000000000000140013030000033474461790103901016078000000000000000042370140000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241575.005750000000100011000000000000000000000000000000000000000000000000000000000000000000002012110001140023140031000000000721000740002015061730000000000023200000000000000000000007603000402020100000020010000002000000000000000000010000102000000190123001130050000103050000010000000000000000000110000001943897200001012023001000000000000041130133000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201543.00543000000000000000062000031000110000018000000000100000000000000000000000000000000000000000000010002000010200000000000000000000010000000000000000010000000100000000000000051401310410126340000011000000100000000000000000002574000000000000000011026100011409000002000000000000000000023010000032213059184212010020060010000000000000281441349177000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201542.005420000000000000000110000010000000000000000000000000020000000000000000000000000000000000000101000101000200000000000000013020200062105001100000000000000002000000000000000101606003306030900000090000000000000000000000000000120120000110000000020002200061805000003000000000000000000300000000014714182101016111250412001020000000000041181314878000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211542.00542000053001102101000000000000000000000000000000000001000000000000000000000000000002000000031110030100237100000002000017300010002010600000000000000000000010000000000000026250100081006027039000000520000000200000000000000000000000000000000000000010401000002802000002000000000000000010301020000021151028672301900212306190000000000010000142852538000000
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191509.00509000000000000000000000131000000000000000000002000000010000000000000000000000000000000000000200022100100000000000000001000010003120000000000000040100003000000000000000316091021333143040200000011020000000000000000000000000000103610210000000027703200000404000001000000000000000000001000000010748511530000001014000000000000000061152434000000
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................181458.00458000000000000000000000000000030390100001000000000000000000200000000000000000001000006100010300010000103000000000000303303001006487100120000000000000000000000000000000041501130290441605110000014120000000000000000000000000038400100000000000006604500001000000002000000000000000000000010000142162541866301600001503500101000000000100222024000000
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................201398.00398000000000200000000000014000000000000000000100000000000001171000000000000000000000100040001124125350027000000000002000400001000202200000000000130000001100000000100000031180150023412711501800000016000000010000000000000000000000100120101000000007100100001002000001000000000000000120300030000087915813300200004056000010000000000021641101000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................191389.00389000000000000000011000010000020100000000000010000000000000000000000000000000000000000000000100000000000000000000200100000000201100000000000000100000004000000000000000210010200122104000003202000000000000000000000000024500000000000010000102800008708000003000000000010000000000010000022283741115101020050420000000000000000117520381710100000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................201350.00350000000000000000000000000000113661020000000000000000000000000000000000000000000000000000000000000000000000000000000006603015151000200000000000414000000000000000000000002436014427747121643100000300020000000000000000000000000001000000000000000000013000013010000000000000000000000300000000000623810011000000100000000000000000005741011000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241346.00346000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000010000013000000000000103101001500032000000000000000000100000000000000000770500180203012000000910000000000000000000000000001002001121100000100030060000730000000200000000000000000000010000001510149113102020010012140000000000000000165032137913000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................231313.0031300000000001000000000000000000000000000010000000000000000000000000000000000000000000114000002017200000000000001000000311600000004116535000000000000410000000100000000000000440700000000000000001101000000000000000000000000000100010000000018400126012000022010000000000000000000000000000000000100591231000000802600000000000000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................231299.0029900000000000000000000000000000000000100000000000000000000000000000000000000000000054211001010010000000000000000000000073010100013013100000000000022100101050000000000000005308001202060620000082030000001000000010000000000000000000020000010020130303000128040000000000000000000000100000000000189793340080000407900000000000000005540001000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAA.................................................................................191297.00297000000000000000020000000000011010100000000000000000000000000000000000000000000000000000000000000000000000000000000002050000000000000000000001100000000000000000000000330002001101430000000000000000000000000000000000000110000000000000000320000100010200000000000000000000000000000000009617201010010010202200000020000000001512863136000000
....................................................................................................................................TTTGGTTATCTAGCTGTATGATC.................................................................................................................231293.002930000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153135000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211292.0029200000000000000000000000000000000000000000011000000000000100000000000000000000000010050000000000000000000000000000000920104130000100000000006290000100000000000000000030270141071111402514920000027000000000000000000000000000001000100001000000001101000000100000002000000000000000000000120000031028200000000100200000000000000000130000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................241278.00278000000001100000000000010000010000000000000000000000000005440000000000000000000000041311001101120242425013422001000203300013800000000000000011000000002000000000000000330600230215041000004300000000100000001000000000010100011010000010006200300003104000001000000000000000002000000000074456830000100505120000000000000000727112663000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................231277.0027700000000000000000100001000000000000001000010000000000000000000000000000000000000000000000000001000001000000000000000000000000101000000000000100000000300000000000000031020014030201000000320000001000000000000000000003100000000000000300130414000013140100000050000000000100000001020100000137111623240401003025002111000000000012401521612000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGA..................................................................................181235.00235000000000000000010000000000020001200000000000000000000000000000000000000000000010001000000000010000000000000000000002040000000210000000000000000000000000000000000000029000000002312000000000000000000000000000000000000110000000000000000010100000040000000100000000000000000000000000008111736600006000020210000000000000000055172053000000
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................191232.002320000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000011000100000000010001000000000000100000000000011030000010000000000000000100001801100004000000100000020100000001000000000006500000000000000001460100000000000000100000000000000001230000000002653163061020000404140010000000000000512951096000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTATC...........................................................................251199.00199000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010198000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................201191.0019100000000010000000000000000000000000000000000000000000000000000000000000000000000000820000000000000010000000000110010300000000200000000000000140000000000000000000000002040001111200021000003200000000000000000000000000201100000000000000001260010000010000000000000000000000004011000000005314262433010100204300001000000000002752010000000
droEre2
TTCCCT-----TT---CAACCATCTGC------------------------------AGTGTTACA-TAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-AAAAACAAAGCCCACGTTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221235258.002352585063414529824026387622227323313
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231145370.001453705827724265404711794284111848195
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21149365.00493652722716123607702818380295
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2117174.007174682420295268169538140
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2217095.007095152027217697290132540
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2216564.00656434496125168873440
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2314531.00453123722041636410087155
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2214385.00438542782218273910
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2113455.00345532809517431010
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2013216.0032161175927122315963650
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2212257.002257303234601576668370
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2412152.002152768106848258351712
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2011881.00188118600015150
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2311623.00162342068302012546500
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231710.007106568148784050
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191573.00573249125111801070
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241547.005472053029101381305
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201509.00509165927361671050
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211397.003971381202861500
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231397.0039726592952222090
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211357.0035720816102171310
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251338.0033862115101011490
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................231319.003197728730221550
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221291.002918333143353750
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201272.00272172582631570
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211222.002221019430780
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201190.0019012101341420
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211180.001801676379690
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................221177.00177175000020
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221175.001752212156925320
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241165.0016515023338770
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................191164.001646213151370
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................211152.001521270725110
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241143.001435428042370
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191122.001228127012200
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................231111.00111502818780
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211100.0010089103250
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24191.00913822416290
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19188.008886010010
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19186.008621111124280
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20178.0078478131180
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................24173.007317133223150
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20165.0065463132100
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23159.005956000300
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23156.00562511314120
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21153.005352001000
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................20148.0048282001080
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................24136.003636000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24134.0034113115130
........................................................................................................................................................................ATAAAGCTAGCTTACCGAA.................................................................................19130.003011115210
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................21130.003002102070
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18126.002651022160
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................23122.002222000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTACT....................................................................................................................22122.002210218010
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18122.002210100380
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19121.00217211370
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20118.001810413000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................23118.00183110580
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22118.00186000660
droYak3
TTCCCT-----TT---CAACCATCCGC------------------------------AGTGTTACA-CAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................232223497.0044699410306295693684402506725234070687723101009
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................222110485.0022097030542219012149045129405265801843772290
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21220153.0040306493413150124447682277383229000100
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2026345.00126906876871087026911541691050
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2222988.505977191628177414891686132860000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2122576.505153663228593261985945370010
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2221715.0034300159275330821781091010
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2421544.00308822750019051585011512012100
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2321408.502817273583145985841951380000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2221394.502789323274191655140000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................2321336.002672200542552582850000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................2121301.5026033471224113820000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2221049.0020986115141777617420310000
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................212953.001906116991493402210000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................232843.00168645075714572688302100
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................202537.00107411060413320000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................242468.0093694172532382636380000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................232359.0071876115134476520000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................222238.00476125435126129120000
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................192231.00462831658244657211030
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................242206.504136021298292210000
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................212206.504130110228553790010
..................................................................................................................................TCTTTGGTTATCTAGCT.........................................................................................................................172193.0038600000005713280
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................232185.0037005422228520410000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................222184.003682162526472250000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................252160.00320111369125623280000
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................202152.0030408361120512230000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................202134.002684341704724250000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................212113.502270022610000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..............................................................................222107.502150021500000000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21271.501430129930200000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................21264.50129018781413150000
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20263.501272298690010000
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18262.0012460531001131220
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................24259.5011901767808100000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24254.5010956271215260000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................21346.3313915571421423140000
..................................................................................................................................TCTTTGGTTATCTAGC..........................................................................................................................16246.00920000000110810
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20238.00760432820210000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21236.00724071930120000
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................20236.00721173614760000
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19235.0070145733740000
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19230.00600213070020000
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19228.5057050700000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24228.50576241750140000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22225.0050047300000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23223.0046029271430000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23222.0044041210000000
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19218.50370111922300000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24216.003279703420000
.......................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..............................................................................23214.5029012800000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC............................................................................23214.50290114110120000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGC...............................................................................20214.0028002800000000
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20213.5027020241000000
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18213.0026091240100000
..................................................................................................................................TCTTTGGTTATCTAGCTGC.......................................................................................................................19312.67381901801000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23312.0036070351920000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................20212.002418102660000
droEug1
TTCCCT-----TT---CAACAATTCGC------------------------------GGCGTTATG-CAATCTACTA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCAGCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTAT-------------AC----TGAASizeHit CountTotal NormTotal
No Reads
droBia1
TTCCCT-----TT---CAGCGGTTCCC------------------------------AGTGTTATG-CAATCGACTC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCAGCGAAACAG-CC-G----CGAAACCCACATTGCTCGT-------------AC----TGAASizeHit CountTotal NormTotal
No Reads
droTak1
TTCCCT-----TT---CAGCAATTCAC------------------------------AGTGTTATA-TAATCGACTT--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACAA-CC-GAAAA-GAAGCACACGTTGCGTAT-------------AC----TCAASizeHit CountTotal NormTotal
No Reads
droEle1
TTCCCT-----TT---CAACAATTCGC------------------------------AGTGTTATA-TAATCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAGCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTAT-------------AC----CGAASizeHit CountTotal NormTotal
No Reads
droRho1
TTCCCT-----TT---CAACAATTCCA------------------------------AGTGTTATA-TAACCGACTC--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCAGCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotal
No Reads
droFic1
TTCGCT-----TT---CGACAATTGCC------------------------------AGTGTTACA-CAATCCCATC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACGG-CC-AAAAAGGAAACCCACGTTGCCTAT-------------GCCAAGCCAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTCCCT-----TT---CAGCAATGCCG------------------------------AGTGTTACA-CAATCAACTC--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAA------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTCCCT-----TT---T---------------------------------------------------------TTTCAAACAATACTCCCACAAATCTTATATAACACT--AT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACAGTCCAAAAAAGGAAACCCACATTGCGTAT-------------AC----TCAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................22182455.0082455142395765314672932479727215
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................23147153.00471531571392401627493692986339
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21125620.0025620124111188100466056671594
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2112997.002997495269413564391397
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2212546.002546839258156389290614
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2212188.00218852625740100435830
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2011979.0019797424465232446108
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2311907.00190711749957117166294
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2211759.0017592705670306274234
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2311475.00147557710318201413163
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2211246.0012461218153154
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111081.001081104112121411
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................201940.0094093200350
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191611.0061125622912217725
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................241602.00602192781097106119
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241493.00493221193778093
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231400.00400499311741253
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241311.003116074159216
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211272.0027212218014244
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211254.002548600355380
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231205.0020524294602464
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221164.0016452111302941
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241151.0015111314319101
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201139.00139140377108
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201138.001381922183355
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201132.0013251141081831
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211125.0012525171173431
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201124.00124480016546
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211116.0011685104656
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221106.00106171110401513
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................25189.008926656739
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24185.00852110131931
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19185.00856237562
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23180.008045011888
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................23177.00772716461014
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21174.00746720302
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21172.00727207497
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19169.00695501472
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20157.005732502117
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23148.00484138725
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19148.00484800000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22145.00454400010
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19142.004219510116
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................23133.003311103126
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20132.00321381343
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24132.003210004711
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT............................................................................24128.00285000419
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................21127.00270160155
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22126.00265001911
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..................................................................................................................23122.00222110000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..............................................................................22121.00210170121
........................................................................................................................................................................ATAAAGCTAGCTTACCGAA.................................................................................19121.0021541353
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23119.00191900000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................24119.00191900000
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21119.00191900000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................23118.00181021302
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18115.00151400010
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTA..............................................................................21114.00140100310
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18114.0014420044
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18114.0014410711
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24112.0012300135
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................18110.00101000000
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19110.0010640000
droBip1
TTCCCT-----TT---T---------------------------------------------------------TTTCAAACAATACTCCCACAAATCTTATACAACACT--AT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTAT-------------AC----TCAASizeHit CountTotal NormTotal
No Reads
dp5
ATCGTT-----CC---CATCGATAG-----------------------------AATGGTGTAATT-TAAAGTTCTT--------------------------------C--AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACCG--------AAGAAACCCACGTTACGTACTGCGAGCCAACATAG----CCAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231169434.00169434408407753038613032284623985157146330862707
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221135432.00135432125320261504113083761823601768162193727274
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21196899.00968994125964839813482252044025814146254413950
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2016504.0065047236061173249681544143134631
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2215353.0053533194481447180151716401350
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2014459.00445904415180540719
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2213498.00349813292261235806136
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2112941.00294119086562273024653620416
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2312839.00283920116556717521868181279364
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2112452.00245202323204300220350
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2212405.00240512929206411131037644539
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2311987.001987110302791152088380317
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................1911678.0016781512848681514125121100
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2411564.0015646551123121284274044584
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2211406.00140604534917818099920211
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................2111374.001374322775568140001
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211673.00673021321353920021333
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211414.00414032704115540013
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201406.0040601031128478106112
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191346.00346024214592301151
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231325.0032581215447664220111
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221309.003090136441341141701133
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231291.00291073112176818012
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................191274.00274027300000001
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241269.002692973201381301391
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201256.002565194190933005
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251199.001991571411562401071
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................231197.0019716444926956006
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211155.00155014430510002
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201143.0014303659721722000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221140.0014012246945310211
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211134.0013405131741624001
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................181126.00126012401000010
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................221119.00119011211100031
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................201104.00104038529210740
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241101.00101024206454002
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18186.0086057211020419
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23182.008206003356041
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................24176.007601325217100216
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19176.0076030118060030
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24176.00762406240100210
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................21174.0074006014000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................20168.006804650548000
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21162.006205800000013
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20162.006205235200000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23151.005105100000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..............................................................................22146.004600424000000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.....................................................................................................................22142.004204200000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24141.0041015126030014
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19140.004002815213000
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18134.003461601201017
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19134.003401750300009
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20132.003204012510001
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................24132.003203100000001
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22129.002901810640000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23124.00240521961000
..................................................................................................................................TCTTTGGTTATCTAGCTGC.......................................................................................................................19124.002410320000000
...................................................................................................................................CTTTGGTTATCTAGCTGTAA.....................................................................................................................20121.002102100000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTG...................................................................................................................23121.002102101600110
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18120.002001010200007
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21120.00201653311000
....................................................................................................................................TTTGGTTATCTAGCTGTA......................................................................................................................18119.00190911014003
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..................................................................................................................23119.001901401000013
..................................................................................................................................TCTTTGGTTATCTAGCT.........................................................................................................................17117.001700000000116
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................18117.001701000100015
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.............................................................................20117.001701201211000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................23117.001701700000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC............................................................................23116.00160171610000
...................................................................................................................................CTTTGGTTATCTAGCTGTT......................................................................................................................19115.001501500000000
droPer2
ATCGTT-----CC---CA----TCGGT-------------------------AGAATGGTGTAATT-TAAAGTTCTT--------------------------------C--AATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAAC----C-AA---AGAAACCCACGTTACGTACTGCGAC----CATAG----CCAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................22147996.00479963602467186044197719719725
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................23142291.00422911652652775829339745486714
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21136435.00364352794128308496792100073163
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................2313266.00326632217134147
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2012134.00213473746626237438230
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2111608.001608010258361761326
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2211508.00150821187305343509143
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................201961.00961293106175
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................221911.00911721715112936047
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................231810.008101771744897203111
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................241579.00579162793155129123
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191494.00494321321011318225
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................221471.00471644056410
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................231388.00388851143789315
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................211366.00366133946115
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231333.0033327232113240
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................221284.00284127447310336
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211218.0021811491418729
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191108.00108055324197
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211106.0010673518181
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................23199.00990343152711
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................24197.009734812121912
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................20196.009601721131629
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................25195.0095388361624
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................22195.00951319132615
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................22180.0080051017471
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................21166.0066524941014
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18164.00645060440
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................21158.0058020102917
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................24155.00553827170
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................20149.0049142102210
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21142.00422451372
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23142.0042014012142
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................20139.00391190784
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24136.00361831365
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................24134.003402162104
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19129.00290290000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22122.00220200200
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22122.0022032782
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19121.0021050763
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21118.00180152100
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20116.0016343015
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18115.00150110220
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21115.00150150000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.....................................................................................................................22113.00130130000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCT...................................................................................................................23111.00111000100
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20111.0011054020
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................18111.00110100010
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19111.0011131123
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20111.0011024140
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................20110.0010020530
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA................................................................................................................26110.0010800020
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAA....................................................................................................................22110.0010020161
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24110.0010220114
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................2418.008010151
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................2317.007011032
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................2317.007001150
droWil2
ATCAAT-----ATGATGAACAATCGAA------------------------------AATGTTGTGACCCTCG--CA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCA------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221328196.0032819615105184811650518746490641
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231199658.001996583726824072489111501918408
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21132524.00325241405110386194929703168
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................22117216.001721659951152126933361
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2118937.0089372840729244313779
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................2316003.006003579427611561
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2314825.0048258250374088442
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2013627.0036272650572126100179
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2413518.003518987522791487443
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2212610.0026100145691760636
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2312115.0021151168524107147169
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2212100.002100151892715333
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111676.001676513309184148
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................2311346.0013461206658247
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................2311333.00133324215833441
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251893.008934206715251140
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191757.00757426193285852
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................201752.007520749003
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................221582.00582115781530074
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221580.005802425610106166
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241564.005642501181111273
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201527.0052759227243160
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211502.005024954003
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221443.00443534419143184
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211351.0035114126617332
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241331.0033119324177
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................191256.0025629218225
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211243.002435568121098
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201241.002410122346160
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241218.002181011018026
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................181211.002112033014
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................241169.00169371337046
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241131.0013197144214
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201122.0012204311104
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................231122.001220235166
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...................................................................................................................231113.0011380190014
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................211109.001097531246
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211104.001040670298
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201102.001027219803
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCCC..................................................................................................................24196.00966870021
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19187.008713032528
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20179.00792502169
..................................................................................................................................TCTTTGGTTATCTAGCTGG.......................................................................................................................19167.0067660010
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................21166.006604121535
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19164.00643460114
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23155.0055054010
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20154.005402811510
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19151.005102701113
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA................................................................................................................26149.00492651134
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTC..................................................................................................................24144.0044325106
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22142.0042141000
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19139.0039039000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24137.0037288100
..................................................................................................................................TCTTTGGTTATCTAGCTGTC......................................................................................................................20134.0034285010
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTCC.................................................................................................................25131.0031196006
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18129.00290100118
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT............................................................................24128.00280101116
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18126.0026518021
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.................................................................................................................25122.0022122044
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGCA..................................................................................................................24121.0021190011
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.................................................................................................................25120.0020120062
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.............................................................................22120.0020070211
..................................................................................................................................TCTTTGGTTATCTAGCTGC.......................................................................................................................19218.0036360000
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................18118.0018010080
..................................................................................................................................TCTTTGGTTATCTAGCTGTCC.....................................................................................................................21118.0018122004
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................24118.0018018000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAA....................................................................................................................22117.0017310103
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTG.............................................................................22116.0016101104
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................23114.0014014000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGACA.................................................................................................................25114.0014120002
..................................................................................................................................TCTTTGGTTATCTAGCTGTG......................................................................................................................20113.0013111010
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGT.................................................................................................................25113.001390112
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................21113.001321136
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.............................................................................20112.001204062
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTT..............................................................................19112.001203054
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.................................................................................................................25112.001283001
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................18112.0012012000
droVir3
ATTA-----A-----------------GGCGAAACACAGCTAACGACCAGCC-----A------------------G--------------------------------G--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAACGTA-------------------CCACAGCGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221237243.00237243128334782134821567183662056455824501133215402231800131048712875831631175320727142901131031851315313125404134121111610322539514265137161661710422996967719416433127014627619432726075107419573156493819603510730432462469106745013666342722894787710
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231194084.00194084281892832547633299942894168166413632453803233345194258516998113543734323274912782821771095242116033699976197394911833935226636573141429252187633522522103797818961644106015851278775647128421287737413143282711216736935212816557523664117894017378251190612668
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21193444.009344412244619147532225116215533316225294600061973830148236413068964222614833649167937917110733775874231465355319751713185546622020024314112218312320125937215038971694654011178435041791106544884922126197197199
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................22123504.002350471411901375202725192112003216190930386097452030411391207101315151092618667242041626211335635335745980532561891894133736465013523762891149559165020755228504400100000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2318260.008260888325615515804600055341999727622815811024639345214276468145381348431321351070801114146119266194192383170291213137128867056103776113110901100000001010100
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2317502.007502118405106774351337211553000222140591928139343382908538514061214043403560101839610121244751881014326192658604664410671281331961211628372950
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2116684.00668419533164616678331274001735347131346408203121483392244531643041122230138305251510004064445107985355256461849700300100001000100
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2216580.00658027772169248132481136520001074117773715481188314101072310120372000011230000000000000000021337842928802000021204000463
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2015436.00543621969364710712709724400000946618483915512440723735710638840890000013111016102224365351886950655945453417072802950157823294417153171122131914
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2414748.004748681675012122112528054100129012443157553817317279238103208328137361117681616612540001434313911138146146041672542572301010211013501118252520
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................2312963.00296370620333650051304000000000040000000471608010001200000210314322330041591901001112202010000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2212434.002434214521240202362330000161743684964419828702252678827683215112903400013971142012198274343165217535404300100000001001
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2212194.002194032050380302020000430000304000204155120200020800000010100010100011141000001000000001000
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111671.0016710015651403000500002002205010000029020400000600000000000000000001282900000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................2411436.0014363785177812230100270000432113291264165713020361074092052021107801210311266796578323219177010408332253512689
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................1911305.0013054310326460771262500004326142821735152962040316531520700100265000001101001300513041564600120000111600222
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2011184.001184001111000000000003303620270000221851102000002000000000000000000002300000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231890.00890013020107030000122541884493176299020123872277403000105000011210011220110321322401100000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251660.00660317761140122201130003913215541434400141131882301201410180000010121122651213164250000344431263298118
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................231627.006279763163124221400001022221381310010251502800001510010138273116285342756441200000000000000100
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................211617.006175325352450200000000350010803000001312030000050000000000000000001115700000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211433.004332538430732190000231857523317000001225709000001200000000000000000001993300000000222000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241420.004202511459140500030000121436511021410000115310011000011100000110111110011121283100000001200211010
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201395.0039503962101070280000031112192400000993100280000131000000000000000000135304800000000000001000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221360.00360321487416032150000125631071200000442905001006000001001021001110133304200000100000000040
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................241306.0030600151010802000038176211514523360010114242181100260000010000100000000016111400000000000000000
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................211292.0029220122290407260000320143204010106861206000105000000010001000110213122100000200000010000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................221292.00292325733021304000074032220071000041012040000010000000000000000000029802701000000000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211288.00288012560112050000181191813821412000108931209000001000000001001020010000315400000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201282.00282011315050209000029138131210330140210079250700000300010001101200002102223600000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................181216.00216236583140403200012004022390000051651801010003001000000121100024130000000101012000010
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................231193.0019310260000103000013532165136291001004120140000060000000000000000000719300000003000000000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211166.00166001151000000000074115002100000365300001100000000000011001100112200000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241165.001654309370302020000000200312000001334020000010001021041232510103104400010200202000131
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191152.001520270112010000003742212140000033413060000130000000000000000000111300001000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201133.0013363931103000000001220113210000001030100000400000000000000000000191100000000010000000
..................................................................................................................................TCTTTGGTTATCTAGC..........................................................................................................................161129.001290000000000000000000000000000000000000000000003391210172791210522800000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................211114.00114165053010000000018000070001000131301000003000000000000000000016200000000000000100
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................201109.001090013000040300005506350860000043140000000000000000000000000001271100000000000000000
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................201103.0010302407070000000001010040400000222807000103000000000000000000023300300000001000000
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................191100.00100003830610000000011000111200000303803000009000000000000000100004400000000000010000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24194.00942181550200000000100100101000101405010100020000000000000000000913800000000020000001
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22194.009400921000000000000000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23190.0090004000000100008831226051200000153301000001000001000001200000043400000000000000000
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18182.00820022002000000003124018030010011703010000004000000000000000000000000000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................22178.0078017100000000009121041071100000242401000001000001000010000000006200000000000000000
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19177.0077001900801000000330200303000102113217000003000000000000000000001000010100001000001
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18168.006801350051000000004110000200010013504000003000000000000000000000100000000000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19167.006700511303010000322325176000000120010000020000000000000000100015000000000000000000
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19161.006100600000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20161.006100400000001000040022102200000220100000000000000000000000000002000000000000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................23158.00580050000000000072263514600000030303000001000000000000000000003400000000000000000
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT............................................................................24151.00510030000001000071292325000110030400001000000000000000010000013100000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................24150.005031081021000000000110001200000010201000001000000000000011000005400000010000000201
..................................................................................................................................TCTTTGGTTATCTAGCTGG.......................................................................................................................19146.004673900000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23144.004400400000000000000000000200000010000000000000000000000000000001000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA................................................................................................................26143.00433720000000000041210000500000212100004000000000000000000000001300000010000001101
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGATC.................................................................................................................25137.00371519000000000000000000000000000000000000000003003023121001500000000000000000000
.........................................................................................................................................................GTGATAAATAACGTC....................................................................................................15137.00370000000000000000000000000000000000000000000334258210113000400000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAT....................................................................................................................22134.003401100000000000000010300000000000000000000000000000000000000422200000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................23132.0032010101000000001100001000000000000100000000000000000000000001410100000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGC.......................................................................................................................19132.003242401000000000000000010000000000000000000000000000000000000001000000001000000000
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.............................................................................22131.00310001010200000020110317300000000100000002000000001000000000014000000000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTACT....................................................................................................................22130.003000000000010000010000170000000000001000000000000000000000000081100000000000000000
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................18129.002900131010000000000100000200000111201100002000000000000000000001000010000000000000
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...................................................................................................................23126.002612110000000000000000000000000000000000000000000000000000000002100000000000000000
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................23126.002600260000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------CAATTGCAGAGAGTCAA--------------------AGCGACAGC-CAATGGG-AA--------------------------------T--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCAGCGTAACAA----------------CACAGTGCGTAT-------------AC----TTAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................231600396.0060039642805391914520649749237915004
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................221363672.00363672321387466684791112120448232786
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21188888.008888853252124738075387181807015
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................20115626.001562617351816923313064407
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................22113858.0013858238117921434228809311
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................2119095.0090957483732665806569559
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................2317091.0070919092211492065322284
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................2216258.006258464176871655111255
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................2315264.0052642139438441362372135
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2214524.00452433692566109721
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2013846.0038463817125156
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................2413741.0037417302221111912246241
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................2213504.003504248158712272859067
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2113041.00304124224271154613
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................2212536.002536107395233343283509
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................2112353.0023531203723256
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................2412053.00205326810130611479114
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................2312030.002030208120731011416112
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................2111038.0010381708251674817
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................231953.009534584121478018
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191856.008565436676942129
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................221795.007956449251862118
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................201676.0067635392956238
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................201654.0065499192182129133
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................231493.00493632942179324
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................241430.004302646223486
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTC..............................................................................211373.0037310013710
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................201349.003493210022969
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................211339.00339156042613644
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................251323.003237136194310747
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC..............................................................................221317.0031711003123
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................211291.00291231122020629
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................211274.00274180300901
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................191224.0022419291015817
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................191218.00218170312111210
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTC..................................................................................................................241145.001452409244048
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................201133.0013346100842
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................241132.00132155568516
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................191122.00122109000130
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................191121.00121144001030
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCC...................................................................................................................231112.00112605816122
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................201111.001113803143818
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................241100.001001722134710
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................24197.00971938271714
.......................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..............................................................................23191.00913000880
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22190.009078001110
...................................................................................................................................CTTTGGTTATCTAGCTGTATC....................................................................................................................21172.00727200000
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18169.006952011132
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18168.006811272433
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGC...............................................................................20166.00660000660
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................18164.00646100570
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................18162.006216800380
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23158.00585200060
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23153.005319911644
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................23152.005212912136
....................................................................................................................................TTTGGTTATCTAGCTGTATT....................................................................................................................20151.005113612200
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................20149.00498342824
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.............................................................................20147.004712400310
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................21145.00456823224
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................23143.0043414111013
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC.............................................................................22141.00414461233
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................23140.00401701895
droGri2
TGCATATTAAAACGAGCAACAAGCAGA-----------------AAGCAAATAGGATTGTGCAAGT-T--TGTGCCG--------------------------------C--ATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCAACGTAACA----------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................TCTTTGGTTATCTAGCTGTATG....................................................................................................................22134668.00346681636218306
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGA...................................................................................................................23126934.0026934206466288
..................................................................................................................................TCTTTGGTTATCTAGCTGTAT.....................................................................................................................21125994.0025994212524742
...................................................................................................................................CTTTGGTTATCTAGCTGTATGA...................................................................................................................2211650.00165016455
...................................................................................................................................CTTTGGTTATCTAGCTGTAT.....................................................................................................................2011593.00159315903
...................................................................................................................................CTTTGGTTATCTAGCTGTATG....................................................................................................................2111320.001320129822
..................................................................................................................................TCTTTGGTTATCTAGCTGTA......................................................................................................................2011180.001180934246
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA.............................................................................2211100.001100943157
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTT..............................................................................211773.00773530243
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGT...................................................................................................................231604.00604435169
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAA..................................................................................................................241454.0045437579
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA.............................................................................231362.0036230557
..................................................................................................................................TCTTTGGTTATCTAGCTGT.......................................................................................................................191345.0034525194
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT..............................................................................221245.0024515986
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAT..................................................................................................................241231.0023117853
..................................................................................................................................TCTTTGGTTATCTAGCTGTATT....................................................................................................................221221.0022118041
....................................................................................................................................TTTGGTTATCTAGCTGTATGA...................................................................................................................21189.0089809
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTTA.............................................................................21188.0088871
....................................................................................................................................TTTGGTTATCTAGCTGTAT.....................................................................................................................19185.0085805
....................................................................................................................................TTTGGTTATCTAGCTGTATG....................................................................................................................20184.00846420
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGC...................................................................................................................23181.00811566
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGG...................................................................................................................23173.00733241
...................................................................................................................................CTTTGGTTATCTAGCTGTA......................................................................................................................19170.0070700
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGT...............................................................................21149.00492524
...................................................................................................................................CTTTGGTTATCTAGCTGTATGT...................................................................................................................22147.0047461
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGT...............................................................................20147.00473116
..................................................................................................................................TCTTTGGTTATCTAGCTGTATA....................................................................................................................22145.00453015
..........................................................................................................................................................................AAAGCTAGCTTACCGAAGTT..............................................................................20140.0040400
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAA..................................................................................................................23135.0035350
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTT..................................................................................................................24128.00281810
.....................................................................................................................................TTGGTTATCTAGCTGTAT.....................................................................................................................18125.0025241
..................................................................................................................................TCTTTGGTTATCTAGCTG........................................................................................................................18125.0025250
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA.................................................................................................................25125.00251510
..................................................................................................................................TCTTTGGTTATCTAGCTGTAA.....................................................................................................................21124.0024195
..................................................................................................................................TCTTTGGTTATCTAGCTGTATC....................................................................................................................22122.0022814
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAG..................................................................................................................24121.0021183
.....................................................................................................................................TTGGTTATCTAGCTGTATG....................................................................................................................19119.0019163
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA............................................................................23119.0019145
.....................................................................................................................................TTGGTTATCTAGCTGTATGA...................................................................................................................20118.0018171
..................................................................................................................................TCTTTGGTTATCTAGCTGTT......................................................................................................................20117.0017116
.................................................................................................................................GTCTTTGGTTATCTAGCTGTAT.....................................................................................................................22115.0015150
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAG................................................................................20114.0014104
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAT..................................................................................................................23113.0013130
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTT...................................................................................................................23112.001275
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATGA...................................................................................................................24112.0012120
...................................................................................................................................CTTTGGTTATCTAGCTGT.......................................................................................................................18112.0012120
...................................................................................................................................CTTTGGTTATCTAGCTGTATT....................................................................................................................21111.0011110
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAG................................................................................19110.001073
......................................................................................................................................TGGTTATCTAGCTGTATGA...................................................................................................................19110.001091
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA............................................................................2419.00963
..................................................................................................................................TCTTTGGTTATCTAGCTGTAC.....................................................................................................................2118.00853
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTG...................................................................................................................2318.00880
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT.............................................................................2217.00770
......................................................................................................................................TGGTTATCTAGCTGTATG....................................................................................................................1817.00770
.........................................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT............................................................................2316.00633
.................................................................................................................................GTCTTTGGTTATCTAGCTGTATG....................................................................................................................2316.00660
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGTA..................................................................................................................2416.00633
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAC..................................................................................................................2416.00660
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT............................................................................2415.00541
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGGC..................................................................................................................2414.00440
.......................................................................................................................................GGTTATCTAGCTGTATGA...................................................................................................................1814.00440
....................................................................................................................................TTTGGTTATCTAGCTGTATGT...................................................................................................................2113.00330
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGGCA.................................................................................................................2513.00330
............................................................................................................................................................................AGCTAGCTTACCGAAGTTA.............................................................................1913.00330
..................................................................................................................................TCTTTGGTTATCTAGCTGTATTC...................................................................................................................2313.00330
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAG..................................................................................................................2313.00330
........................................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT.............................................................................2313.00330
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTTA.............................................................................2013.00330
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC.................................................................................................................2513.00330
...................................................................................................................................CTTTGGTTATCTAGCTGTATA....................................................................................................................2113.00330
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGGCC.................................................................................................................2513.00330
..................................................................................................................................TCTTTGGTTATCTAGCTGTAAA....................................................................................................................2212.00220
...................................................................................................................................CTTTGGTTATCTAGCTGTATGG...................................................................................................................2212.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGCT..................................................................................................................2412.00220
....................................................................................................................................TTTGGTTATCTAGCTGTA......................................................................................................................1812.00220
...................................................................................................................................CTTTGGTTATCTAGCTGTATGAAA.................................................................................................................2412.00211
...................................................................................................................................CTTTGGTTATCTAGCTGTAA.....................................................................................................................2012.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGCC..................................................................................................................2412.00220
.......................................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT..............................................................................2312.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGG.................................................................................................................2512.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAGA.................................................................................................................2512.00220
...................................................................................................................................CTTTGGTTATCTAGCTGTT......................................................................................................................1912.00220
...................................................................................................................................CTTTGGTTATCTAGCTGTATGTT..................................................................................................................2312.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATAT...................................................................................................................2312.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAT................................................................................................................2612.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG.................................................................................................................2512.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTAG.....................................................................................................................2112.00211
...................................................................................................................................CTTTGGTTATCTAGCTGTATC....................................................................................................................2112.00220
...........................................................................................................................................................................AAGCTAGCTTACCGAAGTT..............................................................................1912.00220
..................................................................................................................................TCTTTGGTTATCTAGCTGTATCG...................................................................................................................2312.00220

Generated: 10/20/2015 at 07:40 PM