ID:

dse-mir-5

 Coordinate:

scaffold_1:13063395-13063458 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.1 -23.9 -23.7

Flybase annnotation

utr3 [utr3_minus_3616]; pre_miRNA [Dsec\mir-5-RM]; miRNA [Dsec\miR-5-RA]

No Repeatable elements found

Sense Strand Reads

CAAGTCAGGAAATCAAGTTAAGTGATCCCCAAATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGTTCCCGAACATATCACAGTGATTTTCCTTTATAACGCATGTTTAAAGTCCACAATTCATCAAGGAAAATTAAGCCAAGTTGGCA

*************************************......(((.((.(((((((((.(((((((((((((((..(((....))).)))))))))))))))))))))).)).)).))).......************************************* 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 M054

female body

 V115

head

 V113

male body
....................................................AAAGGAACGATCGTTGTGATATG......................................................................................... 23 0 1 28672.00 28672 27808 392 457 15
....................................................AAAGGAACGATCGTTGTGATAT.......................................................................................... 22 0 1 7289.00 7289 6980 95 192 22
..........................................................................................TATCACAGTGATTTTCCTTTAT.................................................... 22 0 1 1700.00 1700 1594 86 19 1
....................................................AAAGGAACGATCGTTGTGATA........................................................................................... 21 0 1 1183.00 1183 1166 9 6 2
....................................................AAAGGAACGATCGTTGTGAT............................................................................................ 20 0 1 899.00 899 874 2 19 4
..........................................................................................TATCACAGTGATTTTCCTTTATA................................................... 23 0 1 631.00 631 423 184 24 0
.....................................................AAGGAACGATCGTTGTGATATG......................................................................................... 22 0 1 177.00 177 133 44 0 0
...........................................................................................ATCACAGTGATTTTCCTTTAT.................................................... 21 0 1 174.00 174 158 15 1 0
....................................................AAAGGAACGATCGTTGTGATATGT........................................................................................ 24 1 1 139.00 139 135 3 1 0
....................................................AAAGGAACGATTGTTGTGATATG......................................................................................... 23 1 1 122.00 122 119 0 3 0
....................................................AAAGGAACGATCGTTGTGATATGA........................................................................................ 24 0 1 109.00 109 107 2 0 0
....................................................AAAGGAACGATCGTTGTGATATT......................................................................................... 23 1 1 97.00 97 92 1 3 1
....................................................AAAGGAATGATCGTTGTGATATG......................................................................................... 23 1 1 90.00 90 90 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTATA................................................... 22 0 1 75.00 75 44 28 3 0
..................................................TAAAAGGAACGATCGTTGTGAT............................................................................................ 22 0 1 66.00 66 66 0 0 0
.................................TTCATCGGGCCATTCGCTA................................................................................................................ 19 0 1 66.00 66 54 5 7 0
....................................................AAAGGAACGATCGTTGTGATATGC........................................................................................ 24 1 1 57.00 57 56 0 1 0
....................................................AAAGGAACGATCTTTGTGATATG......................................................................................... 23 1 1 53.00 53 51 2 0 0
....................................................AAAGGAACTATCGTTGTGATATG......................................................................................... 23 1 1 45.00 45 44 1 0 0
....................................................AAAGGAACGATCGTCGTGATATG......................................................................................... 23 1 1 44.00 44 43 0 1 0
....................................................AAAGGAACGATCGTTGCGATATG......................................................................................... 23 1 1 44.00 44 44 0 0 0
.....................................................AAGGAACGATCGTTGTGATAT.......................................................................................... 21 0 1 43.00 43 35 7 1 0
....................................................AAAGGAGCGATCGTTGTGATATG......................................................................................... 23 1 1 41.00 41 40 0 1 0
....................................................AAGGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 41.00 41 40 1 0 0
....................................................AAAGGAACGATCGTTGTGATATC......................................................................................... 23 1 1 40.00 40 38 1 1 0
....................................................AAAGGAACGATCGTTGTGGTATG......................................................................................... 23 1 1 36.00 36 35 1 0 0
....................................................AAAGGGACGATCGTTGTGATATG......................................................................................... 23 1 1 35.00 35 35 0 0 0
....................................................AAAGGAACGACCGTTGTGATATG......................................................................................... 23 1 1 34.00 34 31 2 1 0
..........................................................................................TATCACAGTGATTTTCCTTTATAA.................................................. 24 0 1 34.00 34 28 6 0 0
....................................................AAAGGAACGATCGCTGTGATATG......................................................................................... 23 1 1 33.00 33 33 0 0 0
....................................................AAAGTAACGATCGTTGTGATATG......................................................................................... 23 1 1 31.00 31 29 2 0 0
....................................................AAAGGAACGATCGTTGTGA............................................................................................. 19 0 1 31.00 31 30 1 0 0
....................................................AAAGGAACGATCGTTGTGATATA......................................................................................... 23 1 1 31.00 31 31 0 0 0
....................................................AAAGGAATGATCGTTGTGATAT.......................................................................................... 22 1 1 28.00 28 28 0 0 0
....................................................AAAGGAACGATCGTTGTG.............................................................................................. 18 0 1 27.00 27 27 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTT...................................................... 20 0 1 27.00 27 24 2 1 0
..........................................................................................TATCACAGTGATTTTCCT........................................................ 18 0 1 26.00 26 25 0 1 0
....................................................AGAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 26.00 26 25 0 1 0
....................................................AAAGGAACGATCGTTGTGATGTG......................................................................................... 23 1 1 26.00 26 24 2 0 0
....................................................AAAGGAACGATCGTTGTTATATG......................................................................................... 23 1 1 26.00 26 25 0 1 0
....................................................AAAGGAACGATCGTTGTGACATG......................................................................................... 23 1 1 25.00 25 25 0 0 0
....................................................AAATGAACGATCGTTGTGATATG......................................................................................... 23 1 1 25.00 25 21 1 3 0
....................................................AAAGGAACAATCGTTGTGATATG......................................................................................... 23 1 1 25.00 25 21 2 1 1
....................................................AAAGGAACGATCGTTGTGATACG......................................................................................... 23 1 1 24.00 24 24 0 0 0
....................................................AAAGGAACGATTGTTGTGATAT.......................................................................................... 22 1 1 24.00 24 24 0 0 0
....................................................AAAGGAACGATCATTGTGATATG......................................................................................... 23 1 1 24.00 24 22 2 0 0
....................................................AAAGGAACGATCCTTGTGATATG......................................................................................... 23 1 1 23.00 23 23 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTTA..................................................... 21 0 1 23.00 23 21 2 0 0
....................................................AACGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 22.00 22 21 0 1 0
....................................................AAAGGAACGATCGTTGTGATAC.......................................................................................... 22 1 1 22.00 22 22 0 0 0
....................................................GAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 21.00 21 20 0 1 0
....................................................AAAGGAACGGTCGTTGTGATATG......................................................................................... 23 1 1 21.00 21 20 0 1 0
....................................................AAACGAACGATCGTTGTGATATG......................................................................................... 23 1 1 20.00 20 20 0 0 0
....................................................AAAGGAACGATCGTTGTGCTATG......................................................................................... 23 1 1 19.00 19 18 0 1 0
....................................................AAAGGAACGTTCGTTGTGATATG......................................................................................... 23 1 1 19.00 19 19 0 0 0
....................................................AAAAGAACGATCGTTGTGATATG......................................................................................... 23 1 1 19.00 19 18 1 0 0
....................................................AAAGGAACTATCGTTGTGATAT.......................................................................................... 22 1 1 17.00 17 17 0 0 0
....................................................AAAGGAACGATCGTTATGATATG......................................................................................... 23 1 1 17.00 17 17 0 0 0
....................................................AAAGCAACGATCGTTGTGATATG......................................................................................... 23 1 1 17.00 17 15 2 0 0
....................................................AAAGGAACCATCGTTGTGATATG......................................................................................... 23 1 1 16.00 16 15 0 1 0
....................................................AAAGGAAAGATCGTTGTGATATG......................................................................................... 23 1 1 16.00 16 14 2 0 0
....................................................AAAGAAACGATCGTTGTGATATG......................................................................................... 23 1 1 16.00 16 16 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGTT....................................................................................... 25 2 1 16.00 16 15 0 0 1
....................................................AAAGGAACGATCTTTGTGATAT.......................................................................................... 22 1 1 16.00 16 15 1 0 0
....................................................AAAGGAACGATCGTTGATAT............................................................................................ 20 2 1 15.00 15 13 2 0 0
....................................................AAAGGAACGATCGTAGTGATATG......................................................................................... 23 1 1 14.00 14 14 0 0 0
..............................................................................................ACAGTGATTTTCCTTTAT.................................................... 18 0 1 13.00 13 13 0 0 0
....................................................AAAGGAACGAACGTTGTGATATG......................................................................................... 23 1 1 13.00 13 13 0 0 0
....................................................AAAGGAACGATCGTTGTCATATG......................................................................................... 23 1 1 13.00 13 11 1 1 0
....................................................AAGGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 12.00 12 12 0 0 0
....................................................AAAGGAACGATCGTTGTGATCTG......................................................................................... 23 1 1 12.00 12 12 0 0 0
....................................................AAAGGAACGATAGTTGTGATATG......................................................................................... 23 1 1 12.00 12 11 0 1 0
....................................................AAAGGAACGATCGTTGAGATATG......................................................................................... 23 1 1 11.00 11 11 0 0 0
.....................................................AAAGAACGATCGTTGTGATATG......................................................................................... 22 1 1 11.00 11 11 0 0 0
....................................................AAAGGAACGATCGTTCTGATATG......................................................................................... 23 1 1 11.00 11 11 0 0 0
....................................................AAAGGAACGCTCGTTGTGATATG......................................................................................... 23 1 1 11.00 11 11 0 0 0
....................................................ATAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 10.00 10 10 0 0 0
.....................................................AAGTAACGATCGTTGTGATATG......................................................................................... 22 1 1 10.00 10 10 0 0 0
............................................................................................TCACAGTGATTTTCCTTTAT.................................................... 20 0 1 10.00 10 10 0 0 0
....................................................AGAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 10.00 10 9 1 0 0
....................................................AAAGGAACGATCGTTTTGATAT.......................................................................................... 22 1 1 10.00 10 10 0 0 0
....................................................AAAGGAACGATCGTTGTGTTATG......................................................................................... 23 1 1 10.00 10 10 0 0 0
..........................................................................................TATCATAGTGATTTTCCTTTAT.................................................... 22 1 1 10.00 10 9 1 0 0
....................................................AAAGGAACGATCGTTGCGATAT.......................................................................................... 22 1 1 10.00 10 10 0 0 0
....................................................AAAGGAACGATCGTTGTGATGT.......................................................................................... 22 1 1 10.00 10 9 1 0 0
....................................................ACAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 10.00 10 10 0 0 0
..................................................TAAAAGGAACGATCGTTGTGATA........................................................................................... 23 0 1 10.00 10 10 0 0 0
....................................................AAAGTAACGATCGTTGTGATAT.......................................................................................... 22 1 1 9.00 9 9 0 0 0
....................................................AAAGGAACGATCGTTGTAATATG......................................................................................... 23 1 1 9.00 9 9 0 0 0
....................................................AAAGGAACCATCGTTGTGATAT.......................................................................................... 22 1 1 9.00 9 9 0 0 0
....................................................AAAGGAATGATCGTTGTGAT............................................................................................ 20 1 1 9.00 9 9 0 0 0
....................................................AAAGGAACGATCGTCGTGATAT.......................................................................................... 22 1 1 8.00 8 8 0 0 0
....................................................AAATGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 8.00 8 6 0 2 0
....................................................AAAGGAACGATCGTTGTGATG........................................................................................... 21 1 1 8.00 8 8 0 0 0
....................................................AATGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 8.00 8 8 0 0 0
....................................................AAAAGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 7.00 7 6 1 0 0
.....................................................AAGGAACGATCGTTGTGATA........................................................................................... 20 0 1 7.00 7 6 1 0 0
.....................................................AAGTAACGATCGTTGTGATAT.......................................................................................... 21 1 1 7.00 7 7 0 0 0
....................................................AAAGGAACAATCGTTGTGATAT.......................................................................................... 22 1 1 7.00 7 7 0 0 0
....................................................AAAGGAACGATCGATGTGATATG......................................................................................... 23 1 1 7.00 7 7 0 0 0
....................................................TAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 7.00 7 6 1 0 0
....................................................AAAGGAACGATCGTTTTGATATG......................................................................................... 23 1 1 7.00 7 7 0 0 0
....................................................AAAGGACCGATCGTTGTGATATG......................................................................................... 23 1 1 7.00 7 7 0 0 0
...................................................CAAAGGAACGATCGTTGTGATATG......................................................................................... 24 1 1 7.00 7 6 1 0 0
....................................................GAAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 7.00 7 7 0 0 0
....................................................AAAGGCACGATCGTTGTGATATG......................................................................................... 23 1 1 6.00 6 6 0 0 0
....................................................AAAGGAACGATCGTTGTGATACC......................................................................................... 23 2 1 6.00 6 6 0 0 0
......................................................AGGAACGATCGTTGTGATATG......................................................................................... 21 0 1 6.00 6 2 4 0 0
....................................................AAAGGAACGATCGTTGTGAAATG......................................................................................... 23 1 1 6.00 6 5 0 1 0
....................................................AAAGCAACGATCGTTGTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
....................................................AAAGGAACGATCGCTGTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
....................................................ACAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
..........................................................................................TATCACGGTGATTTTCCTTTAT.................................................... 22 1 1 6.00 6 6 0 0 0
....................................................AAAGGAGCGATCGTTGTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
..........................................................................................TATCATAGTGATTTTCCTTTATA................................................... 23 1 1 6.00 6 5 1 0 0
....................................................AAAGGAACGATCGTTCTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
....................................................AAAGGGACGATCGTTGTGATAT.......................................................................................... 22 1 1 6.00 6 6 0 0 0
..........................................................................................TATCACAGCGATTTTCCTTTAT.................................................... 22 1 1 6.00 6 5 1 0 0
....................................................AAAGGAACGATCGTTGTGATATGAA....................................................................................... 25 1 1 5.00 5 5 0 0 0
..............................................................................................ACAGTGATTTTCCTTTATA................................................... 19 0 1 5.00 5 5 0 0 0
........................................................AAACGATCGTTGTGATATG......................................................................................... 19 1 2 5.00 10 10 0 0 0
..........................................................................................TATCACAGTGATTTTCTTTTAT.................................................... 22 1 1 5.00 5 5 0 0 0
....................................................AAAGGAACGATCCTTGTGATAT.......................................................................................... 22 1 1 5.00 5 5 0 0 0
....................................................AAAGGAACGATCGTAGTGATAT.......................................................................................... 22 1 1 5.00 5 5 0 0 0
....................................................AAAGGAACGATAGTTGTGATAT.......................................................................................... 22 1 1 5.00 5 5 0 0 0
....................................................AAAGGAAGGATCGTTGTGATATG......................................................................................... 23 1 1 5.00 5 5 0 0 0
..........................................................................................TATCACAGTGATTTTCCCTTAT.................................................... 22 1 1 5.00 5 5 0 0 0
....................................................AAACGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 5.00 5 5 0 0 0
............................................................................................TATCAGTGATTTTCCTTTAT.................................................... 20 2 3 4.67 14 14 0 0 0
....................................................AAAGGAACGATCGTTGATATG........................................................................................... 21 3 3 4.67 14 11 2 1 0
..........................................................................................TATTACAGTGATTTTCCTTTAT.................................................... 22 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCATTGTGATAT.......................................................................................... 22 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGAGATG......................................................................................... 23 1 1 4.00 4 3 1 0 0
....................................................CAAGGAACGATCGTTGTGATATG......................................................................................... 23 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATTGTTGTGATA........................................................................................... 21 1 1 4.00 4 4 0 0 0
....................................................AAAGTAACGATCGTTGTGAT............................................................................................ 20 1 1 4.00 4 4 0 0 0
....................................................ATAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 4.00 4 4 0 0 0
..........................................................................................TATCACAGTGATTTCCCTTTAT.................................................... 22 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGATAGG......................................................................................... 23 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGATTTG......................................................................................... 23 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGATAAG......................................................................................... 23 1 1 4.00 4 4 0 0 0
..........................................................................................TATCACAGTGATTTTTCTTTAT.................................................... 22 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGCGATA........................................................................................... 21 1 1 4.00 4 4 0 0 0
..........................................................................................TATCACTGTGATTTTCCTTTAT.................................................... 22 1 1 4.00 4 4 0 0 0
............................................................................................TCACAGTGATTTTCCTTTATA................................................... 21 0 1 4.00 4 1 3 0 0
................................ATTCATCGGGCCATTCGCTA................................................................................................................ 20 0 1 4.00 4 4 0 0 0
........................................................GAACGATCGTTGTGATATG......................................................................................... 19 0 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGGTAT.......................................................................................... 22 1 1 4.00 4 4 0 0 0
....................................................AAAGGAACGATCGTTGTGATAA.......................................................................................... 22 1 1 3.00 3 3 0 0 0
..........................................................................................TATCACAGTGATTTTCCCTTATA................................................... 23 1 1 3.00 3 3 0 0 0
.....................................................AATGAACGATCGTTGTGATATG......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGTTT...................................................................................... 26 2 1 3.00 3 3 0 0 0
........................................................GAACGATCGTTGTGATAT.......................................................................................... 18 0 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCTTTGTGATA........................................................................................... 21 1 1 3.00 3 3 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTATAA.................................................. 23 0 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGGTGTGATATG......................................................................................... 23 1 1 3.00 3 3 0 0 0
......................................................AAAAACGATCGTTGTGATATG......................................................................................... 21 2 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGTCATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGTAATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGGTCGTTGTGATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGTACGATCGTTGTGATATG......................................................................................... 23 1 1 3.00 3 2 1 0 0
.........................................................................................CTATCACAGTGATTTTCCTTTAT.................................................... 23 1 1 3.00 3 3 0 0 0
.....................................................AAAGAACGATCGTTGTGATAT.......................................................................................... 21 1 1 3.00 3 3 0 0 0
..........................................................................................CATCACAGTGATTTTCCTTTATA................................................... 23 1 1 3.00 3 1 2 0 0
.........................................................AACGATCGTTGTGATATG......................................................................................... 18 0 1 3.00 3 3 0 0 0
..........................................................................................TCTCACAGTGATTTTCCTTTAT.................................................... 22 1 1 3.00 3 3 0 0 0
..........................................................................................TATCACAGTGATTTTCTTTTATA................................................... 23 1 1 3.00 3 3 0 0 0
....................................................GAAGGAACGATCGTTGTGAT............................................................................................ 20 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGTGATT........................................................................................... 21 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGGGATATG......................................................................................... 23 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTTGGGATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGATCGTCGTGAT............................................................................................ 20 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGCTCGTTGTGAT............................................................................................ 20 1 1 3.00 3 3 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................TAAGGAACGATCGTTGTGATAT.......................................................................................... 22 1 1 3.00 3 3 0 0 0
....................................................AAAGGAACGCTCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGGT....................................................................................... 25 2 1 2.00 2 2 0 0 0
......................................................AGGAACGATCGTTGTGATAT.......................................................................................... 20 0 1 2.00 2 1 1 0 0
....................................................AAAGGAACGATCGCTGTGATCTG......................................................................................... 23 2 1 2.00 2 2 0 0 0
....................................................AAAGGGACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGAACGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
..................................................TAAAAGGAACGATCGTTGTGATAT.......................................................................................... 24 0 1 2.00 2 1 0 1 0
....................................................AAAGGAACGATTGTTGTGGTATG......................................................................................... 23 2 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGATTT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTCATTTTCCTTTATA................................................... 23 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGACCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 1 1 0 0
..........................................................................................TATCACAGTGATTTTCCTTTATAT.................................................. 24 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGTA....................................................................................... 25 2 1 2.00 2 2 0 0 0
......................................................ATGAACGATCGTTGTGATAT.......................................................................................... 20 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGAGCGTTGTGATATG......................................................................................... 23 1 1 2.00 2 2 0 0 0
.....................................................AAAGGATGATCGTTGTGATAT.......................................................................................... 21 3 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTGATCTTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAATGAACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGTAACGATCGTTGTGATATGT........................................................................................ 24 2 1 2.00 2 2 0 0 0
.....................................................AAGAAACGATCGTTGTGATATGAA....................................................................................... 24 2 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGAGATTTTCCTTTATA................................................... 23 1 1 2.00 2 1 1 0 0
...................................................AAAAGGAACGATCGTTGTGAT............................................................................................ 21 0 1 2.00 2 2 0 0 0
....................................................AAAGAAACGATCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAAGAACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGGACCGATCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGACAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTGGTTTTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTAATTTTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
..........................................................................................TATCGCAGTGATTTTCCTTTATA................................................... 23 1 1 2.00 2 1 1 0 0
..........................................................................................TATCACAGTGATTTTCCTTTTT.................................................... 22 1 1 2.00 2 2 0 0 0
..........................................................................................TACCACAGTGATTTTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
..................................................TAAAAGGAACGATCGTTGTGA............................................................................................. 21 0 1 2.00 2 2 0 0 0
.....................................................AAGGAACGATCTTTGTGATATG......................................................................................... 22 1 1 2.00 2 1 1 0 0
.....................................................AAAGGATGATCGTTGTGATATG......................................................................................... 22 3 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATTGTTGTGATATGC........................................................................................ 24 2 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTGCTTTTCCTTTATA................................................... 23 1 1 2.00 2 1 1 0 0
....................................................AAAGGAACGATCGTTGTGATAG.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATTATTGTGATATG......................................................................................... 23 2 1 2.00 2 2 0 0 0
....................................................AAAGGAAGGATCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
......................................................ATGAACGATCGTTGTGATATG......................................................................................... 21 1 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTGATTCTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGGTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGG........................................................................................ 24 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTCGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AGAGGAACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGGATCGATCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTATGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGAAACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
.....................................................AAGTAACGATCGTTGTGAT............................................................................................ 19 1 1 2.00 2 2 0 0 0
............................................................................................TATCAGTGATTTTCCTTTATA................................................... 21 2 1 2.00 2 2 0 0 0
..........................................................................................TATCACAGTTATTTTCCTTTAT.................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAATGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGATATGAT....................................................................................... 25 1 1 2.00 2 1 0 1 0
....................................................AAAGGAACGATCTTTGTGAT............................................................................................ 20 1 1 2.00 2 2 0 0 0
....................................................AAAGAAACGATCGTTGTGAT............................................................................................ 20 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGTTCGTTGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................ATAGGAACGATCGTTGTGATA........................................................................................... 21 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATGGTTGTGATATG......................................................................................... 23 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGTGCTA........................................................................................... 21 1 1 2.00 2 1 0 1 0
..........................................................................................TATCACAGCGATTTTCCTTTATA................................................... 23 1 1 2.00 2 1 1 0 0
....................................................AAAGGAACGATCGATGTGATAT.......................................................................................... 22 1 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTGGTGATATG......................................................................................... 23 1 1 2.00 2 2 0 0 0
.....................................................AATCAACGATCGTTGTGATATG......................................................................................... 22 2 1 2.00 2 2 0 0 0
....................................................AAAGGAACGATCGTTGATA............................................................................................. 19 2 1 2.00 2 2 0 0 0
....................................................AAAGGAACGGTCGTTGTGATATGC........................................................................................ 24 2 1 2.00 2 2 0 0 0
..........................................................................................TATATCAGTGATTTTCCTTTAT.................................................... 22 2 1 1.00 1 1 0 0 0
....................................................AAAAAAACGATCGTTGTGATATG......................................................................................... 23 2 1 1.00 1 0 1 0 0
....................................................AAAGGAACGATCGTTGTGACA........................................................................................... 21 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGATCT.......................................................................................... 22 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGCGATATGT........................................................................................ 24 2 1 1.00 1 1 0 0 0
..........................................................................................TATAACAGTGATTTTCCT........................................................ 18 1 1 1.00 1 1 0 0 0
....................................................AAAGGGACGATCGTTGTGATGTG......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGATATTTT....................................................................................... 25 3 1 1.00 1 1 0 0 0
....................................................AAAGGAAGGATCGTTGTGAT............................................................................................ 20 1 1 1.00 1 1 0 0 0
.................................TTCATTGGGCCATTCGCTA................................................................................................................ 19 1 1 1.00 1 1 0 0 0
..........................................................................................TATCACACTGATTTTCCTTTAT.................................................... 22 1 1 1.00 1 1 0 0 0
....................................................AATGGAACGATTGTTGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
..........................................................................................TATCACAGTGATATTCCTTTATAA.................................................. 24 1 1 1.00 1 1 0 0 0
...........................................................................................GTCACAGTGATTTTCCTTTAT.................................................... 21 1 1 1.00 1 1 0 0 0
..........................................................................................TATTACAGTGATATTCCTTTATA................................................... 23 2 1 1.00 1 1 0 0 0
..........................................................................................TTTCACAGTGATTTTCCTTTAT.................................................... 22 1 1 1.00 1 0 1 0 0
....................................................AAAGGAGCGATCGTTGTGATA........................................................................................... 21 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGCTCGTTGTGCTATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
..........................................................................................TATAACAGTGATTTTCCTTTATA................................................... 23 1 1 1.00 1 0 1 0 0
...........................................................................................ATCACAGTGATTTTCCTT....................................................... 18 0 1 1.00 1 1 0 0 0
......................................................AGGAATGATCGTTGTGATATG......................................................................................... 21 1 1 1.00 1 1 0 0 0
.................................TTCATCGGGCCATTCGTTA................................................................................................................ 19 1 1 1.00 1 1 0 0 0
....................................................AAAGCAACGGTCGTTGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
..............................AAATTCATCGGGCCATTCGCTA................................................................................................................ 22 0 1 1.00 1 1 0 0 0
....................................................AACGGAACGCTCGTTGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
...........................................................................................ATCTCAGTGATTTTCCTTTAT.................................................... 21 1 1 1.00 1 1 0 0 0
....................................................AAAAGAACGATCGTTGTGTTATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTTC............................................................................................. 19 2 1 1.00 1 1 0 0 0
....................................................AAAGGAATGATTGTTGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAACGAACGATCGTTGTGGTAT.......................................................................................... 22 2 1 1.00 1 1 0 0 0
...........................................................................................ATCACAGTGATTTTCCTTTATAG.................................................. 23 1 1 1.00 1 1 0 0 0
....................................................AAGGGAACGATCGTTGTGCTATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
................................................................................................AGTGATTTTCCTTTATAA.................................................. 18 0 1 1.00 1 1 0 0 0
....................................................AAAGGAACCATCGTCGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
..........................................................................................GATCACAGTGATTTTCCTTTAT.................................................... 22 1 1 1.00 1 1 0 0 0
....................................................AAAGGAAAGATCGTTGTGATAAG......................................................................................... 23 2 1 1.00 1 1 0 0 0
.....................................................AAGGAGCGATCGTTGTGATATG......................................................................................... 22 1 1 1.00 1 1 0 0 0
....................................................AAAGGGGCGATCGTTGTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAAGGTACGATCGTTGTGATA........................................................................................... 21 1 1 1.00 1 1 0 0 0
..........................................................................................TATCACAGTGATTTTCCTTATA.................................................... 22 3 2 1.00 2 2 0 0 0
................................ATTCATCGGGCCATTCGTTA................................................................................................................ 20 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGATACT......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAATGAACGATCGTTGTGGTAT.......................................................................................... 22 2 1 1.00 1 1 0 0 0
.................................................CTAAAAGGAACGATCGTTGTGAT............................................................................................ 23 0 1 1.00 1 1 0 0 0
....................................................AAATGAACGATCGTTCTGATATG......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGATATTT........................................................................................ 24 2 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCCTTGTGATA........................................................................................... 21 1 1 1.00 1 0 0 1 0
....................................................AAAGGGACGATCGTTGTGATATGC........................................................................................ 24 2 1 1.00 1 0 0 1 0
..................................................TAAAAGGAACGATCTTTGTGAT............................................................................................ 22 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCCTCCTGATATG......................................................................................... 23 3 1 1.00 1 1 0 0 0
....................................................AGAGGAACGATCGTTGTGATATGA........................................................................................ 24 1 1 1.00 1 1 0 0 0
....................................................AAAGGACCGATCGTTGTGAT............................................................................................ 20 1 1 1.00 1 1 0 0 0
....................................................AAAGGTCCGATCGTTGTGATAT.......................................................................................... 22 2 1 1.00 1 0 0 1 0
...........................................................................................ATCACAGTGATTTTCCTTTGT.................................................... 21 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGT............................................................................................. 19 1 1 1.00 1 1 0 0 0
..........................................................................................TATTACAGTGATTTTCCTTTATA................................................... 23 1 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTTTGAT............................................................................................ 20 1 1 1.00 1 1 0 0 0
....................................................AAAGGGACGATCGTTGTGATATAA........................................................................................ 24 2 1 1.00 1 1 0 0 0
....................................................AAAGGAACGATCGTTGTGGTATC......................................................................................... 23 2 1 1.00 1 1 0 0 0
....................................................AAAGTAACGATCGTTGTGATCTT......................................................................................... 23 3 1 1.00 1 1 0 0 0
....................................................AAGGGAACGATCGTTGTGTTATG......................................................................................... 23 2 1 1.00 1 1 0 0 0

Anti-sense strand reads

GTTCAGTCCTTTAGTTCAATTCACTAGGGGTTTAAGTAGCCCGGTAAGCGATTTTCCTTGCTAGCAACACTATACTCAACAAGGGCTTGTATAGTGTCACTAAAAGGAAATATTGCGTACAAATTTCAGGTGTTAAGTAGTTCCTTTTAATTCGGTTCAACCGT

*************************************......(((.((.(((((((((.(((((((((((((((..(((....))).)))))))))))))))))))))).)).)).))).......************************************* 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V115

head
........................................................................................GTATAGTGTTGCTACAAGGAAA...................................................... 22 3 1 15.00 15 14 1
.........................................................................................TATAGTGTTGCTACAAGGAAA...................................................... 21 3 2 3.50 7 7 0
........................................................................................GTATAGTGTTGCTAGAAGGAAA...................................................... 22 3 2 0.50 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_1:13063345-13063508 - dse-mir-5 Known_mirbase CAAGTC---AGGAAATCA---------------------------------------------------AGT-------TAAGT---GAT--------CCCC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TC--C--CGAACATATCACAGTGATTTTCCTTTATAACGCATGTTTA--AAGTCCACAATTC---ATCAA-GGAAAATT---A-AG--CC---AAGTTGGCA
droSim2 2r:16195887-16196050 - dsi-mir-5 Known_mirbase CAAGTC---AAGAAATCA---------------------------------------------------AGT-------TAAGT---TAT--------CACC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TC--C---CAACATATCACAGTGATTTTCCTTTATATCGCATGTTAA--AAGTCCACAATTC---ATCAA-GGAAAATG---AAAG--CC---AAGTTGGCA
dm3 chr2R:15548614-15548779 - dme-mir-5 Known_mirbase CGAGTC---AAGAAATTA---------------------------------------------------TGT-------TAAGT---GAT--------CCCC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TT--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTTTA--AAGTCCACAACTC---ATCAA-GGAAAATG---AAAG--TC--AAAGTTGGCA
droEre2 scaffold_4845:9748864-9749030 - der-mir-5 Known_mirbase AGAGTT---AGCAAATCC---------------------------------------------------AGT-------TAAGT---GAT--------CCCC-T--------------A-ATTTGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTAAA--AAGTCCAAAACTC---ATCAATGGGAAATG---AAAG--CC--AAAGTTGCCA
droYak3 2R:13624012-13624177 + dya-mir-5 Known_mirbase CGGGTC---AAGAAATCG---------------------------------------------------AGT-------TAAGT---GTT--------CCCC-C--------------A-ATTTAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TC--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTACA--AAGTCCACAACTC---ATCAA-GGGAAATG---AAAG--CC--AAAGTCGGCA
droEug1 scf7180000409474:2397090-2397237 + CAAGCC---A-----------------------------------------------------------AGT-------TAAGT---GTT--------ACCA-A--------------A-ACTACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TT--T--GTTACATATCACAGTGATTTTCCTTTGTAACGCATGTCTA--ATGCCCACTATTC---ATCAA-GGTTATTA---AA----C----------TAA
droBia1 scf7180000302143:3059517-3059681 - CAAGCC---A-TAAATCA---------------------------------------------------ATT-------TGAGT---GAT--------CCCC-A--------------C-GTATCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCATG--AAGCCCAAAGCTC---ATCAA-GGGAAATA---CCAT--CC--GAAATTACCT
droTak1 scf7180000415384:84298-84459 + CAAGCC---AGTGAATTA---------------------------------------------------AGT-------TGAGT---GAT--------CCCA-G--------------C-ATAACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCTT--AAGCCCCAAAAAC---ATCAA-GGGATATACTATTAA--CC---------AAG
droEle1 scf7180000491201:2013691-2013853 - CAAGCC---AATACAAAA---------------------------------------------------AGT-------TGAGT---GAA--------CCCC-G--------------C-TTACTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TC--C--TTAACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GAGCCCAAAACTC---ATCGATGGGAAATA---CAAT--CC--AAA---AACA
droRho1 scf7180000780066:73902-74066 + CAATTC---AATAAAACA---------------------------------------------------AGT-------TGAGT---GAT--------CCCT-A--------------C-ATTTTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TC--C--GTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GAGCCCAATACTC---ATCGA-GGGAAATA---AGAT--TC--GAAATTATCA
droFic1 scf7180000454039:847755-847912 - CAA------------TAA---------------------------------------------------AGT-------TTAGT---GAT--------TCCT-A--------------A-AGTACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TT--A--GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCG---TTGTCCAAAGCTC---ATCAA-AGGAAAAA---ACATACTT--AAAGTTACAA
droKik1 scf7180000302679:89060-89224 - TGATATTC-AGGATAT------------------------------------------------------GTCCTAAACCAAGT---GAT--------ATCT-CAA------------G-CTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TC--CCCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTTC---AAGTCCAAGATTC---AACGA-TTGA--T-----------C----AGTTCTAA
droAna3 scaffold_13266:9731619-9731788 + dan-mir-5 Known_mirbase TTAACA---AGAATTTCA----------------------------------------------AATGTGAC--TATTCGAAAAAAA-AT-------GTA-AAA--------------T-ATTCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TC-CCTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGCAG---TTGTCCAAAATGC---ATCAA-AAATAACG---A------------GTT---A
droBip1 scf7180000396427:874585-874741 + AAATTT---AAAAAATTA---------------------------------------------------AAT-------AAA------------AAAGTG-AAA--------------T-ATCCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TC-CCTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGTCA---TTGTCCAAAATTC---ATCAG-AGA--------------TC---GAGTTAGTG
dp5 3:12677196-12677403 - dps-mir-5 Known_mirbase CCTACCACA--ACCAC--ACCCACAC------C-AACACCCACACCCACCCTCACATCCATCCCAGTGTCAT-------TGATT---AGT-------TCC-CAA--------------C-TTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TT-CACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GCGCCCACAGCCA---CACAT-GGGAAACG---AAAC--------GCTCAGCG
droPer2 scaffold_2:8906263-8906478 + dpe-mir-5 Known_mirbase CCTACCACA--ACCAC--ACCCACACCAACACC-AACACCCATACCCACCCTCACATCCATCCCAGTGTCAT-------TGATT--AGCT--------CC-CAA--------------C-TTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TT-CACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GCGCCCACAGCCA---CACAT-GGGAAACG---AAACACTC--AGC----GAT
droWil2 scf2_1100000004514:1651422-1651595 - dwi-mir-5 Known_mirbase TAAGG-------ACATCA----------------------------------------------------AT-------AGC------------AAAGTT-C--AAGTTTCATCGTCGTTTTTTTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATT-CACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTTCTGTCCAATA--TATCAACAA-----TATC-----CA--GC--AAAGTTTTCA
droVir3 scaffold_12875:4112408-4112580 + dvi-mir-5 Known_mirbase ATAATC---TGACCATAT--ATATAT------CTGATATTCT---------------------------CGT-------ATACT----------------AT-A--------------T-ATAAATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TT-AACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GCCCGTAAAGC---AACAC-CACATACG---A--T--CT---ATATCCATG
droMoj3 scaffold_6496:20936422-20936592 - dmo-mir-5 Known_mirbase CATCT----A-----------------------------------------------------------TGA-------AAAGT---TTTTATGAAAGTT-C--AAAATGCAAACTCGA---TGAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TC-GACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GTCCCCCAGAC---TACAA-----TATG---AATG--TG-AATATTTATAA
droGri2 scaffold_5621:3076-3241 + dgr-mir-5-2 Known_mirbase TTATAT---AGTGTATAT----------------------------------------------AATAT--TCC-----TGATATAT-GT-------GTT-AAA--------------G-TCGTTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCT----CTGCCCAAAACTC---AACTA---------------A--CCA-GTGTTGAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CAAGTC---AGGAAATCA---------------------------------------------------AGT-------TAAGT---GAT--------CCCC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TC--C--CGAACATATCACAGTGATTTTCCTTTATAACGCATGTTTA--AAGTCCACAATTC---ATCAA-GGAAAATT---A-AG--CC---AAGTTGGCASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................23128672.00286723921527808457
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2217289.00728995226980192
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2211700.001700861159419
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2111183.0011839211666
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................201899.008992487419
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................231631.00631184042324
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................221177.001774401330
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211174.001741501581
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................241139.00139301351
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241109.00109201070
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................23197.009711923
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................22175.0075280443
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................22166.006600660
.........................................................................................................................TTCATCGGGCCATTCGCTA....................................................................................................................................19166.006650547
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24157.005700561
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21143.004370351
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................23140.004010381
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................24134.003460280
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19131.003110300
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................23131.003100310
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................18127.002700270
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20127.002720241
.......................................................................................................................................................................................TATCACAGTGATTTTCCT.......................................................................18126.002600251
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21123.002320210
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................22122.002200220
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25116.001601150
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18113.001300130
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20110.001000100
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................23110.001000100
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................2118.0080080
.............................................................................................................................................AAGGAACGATCGTTGTGATA...............................................................................................................2017.0071060
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................2316.0060060
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................2116.0064020
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAA...........................................................................................................2515.0050050
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1915.0050050
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................2114.0043010
........................................................................................................................ATTCATCGGGCCATTCGCTA....................................................................................................................................2014.0040040
................................................................................................................................................GAACGATCGTTGTGATATG.............................................................................................................1914.0040040
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................2213.0030030
................................................................................................................................................GAACGATCGTTGTGATAT..............................................................................................................1813.0030030
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................2313.0030030
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................1813.0030030
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2113.0030030
............................................................................................................................................AAAGGAACGATCGTTGTGATATGGT...........................................................................................................2512.0020020
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................2012.0021010
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATAT..............................................................................................................2412.0020011
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................2412.0020020
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTA...........................................................................................................2512.0020020
...........................................................................................................................................AAAAGGAACGATCGTTGTGAT................................................................................................................2112.0020020
..........................................................................................................................................TAAAAGGAACGATCGTTGTGA.................................................................................................................2112.0020020
............................................................................................................................................AAAGGAACGATCGTTGTGATAG..............................................................................................................2212.0020020
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................2412.0020020
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................2512.0020011
............................................................................................................................................AAAGGAACGATCGTTGTGATATTTT...........................................................................................................2511.0010010
........................................................................................................................................................................................ATCACAGTGATTTTCCTT......................................................................1811.0010010
.......................................................................................................A--------------A-ATTCATCGGGCCATTCGCTA....................................................................................................................................2211.0010010
............................................................................................................................................AAAGGAACGATCGTTGTTC.................................................................................................................1911.0010010
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAG.................................................................2311.0010010
.............................................................................................................................................................................................AGTGATTTTCCTTTATAA.................................................................1811.0010010
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTATA...................................................................2221.0020020
............................................................................................................................................AAAGGAACGATCGTTGTGATACT.............................................................................................................2311.0010010
.........................................................................................................................................CTAAAAGGAACGATCGTTGTGAT................................................................................................................2311.0010010
............................................................................................................................................AAAGGAACGATCGTTGTGATATTT............................................................................................................2411.0010010
............................................................................................................................................AAAGGAACGATCGTTGTGT.................................................................................................................1911.0010010
droSim2
CAAGTC---AAGAAATCA---------------------------------------------------AGT-------TAAGT---TAT--------CACC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TC--C---CAACATATCACAGTGATTTTCCTTTATATCGCATGTTAA--AAGTCCACAATTC---ATCAA-GGAAAATG---AAAG--CC---AAGTTGGCASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................231153742.001537429463548381180010874145074440006315824125397001
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................221122204.00122204876453472531332012331001341923219911406957320
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................21136713.00367131053228658501132193673382332396103004
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................20110151.0010151198418774301874443142318336002
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2314563.00456300714317418150214390145100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2213927.00392700754117307186970237705030
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................2411342.001342108801002219723202403000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2411338.001338139561002013221402603000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221927.0092700340240327463012400000
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221851.00851118030000021190204000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211808.0080800861300252228030910000
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................231712.007120032600033152126040062000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................241347.003470134500000010000000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................191321.0032181209005303137311013000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................201278.002786027100000000100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................231247.00247009900000626911600000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................241222.00222001130003155390902000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................231218.0021800960002050490849000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................221217.00217001620003022240600000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................231182.0018200690001149620000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAG..............................................................................................................221180.001801017600000010101000
.........................................................................................................................TTCATCGGGCCATTCGCTA....................................................................................................................................191159.001590114900010010700000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................241152.00152001010020344006500000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................221121.00121128100010101101113000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................211116.001160010700010160100000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................231111.001110095000001130200000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................22193.0093003314000031140100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20179.007900000010201704100000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21170.0070002512000015170100000
............................................................................................................................................AAAGGAACGATCGTTGTGG.................................................................................................................19169.0069006800000100000000
.............................................................................................................................................................................................AGTGATTTTCCTTTATA..................................................................17167.00670000000049180000000
............................................................................................................................................AAAGGAACGATCGTTGTGAG................................................................................................................20165.0065006500000000000000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................18156.0056004100000681000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21147.0047004103103403001000
............................................................................................................................................AAAGGAACGATCGTTGTGATATTT............................................................................................................24133.0033000000101100030000
................................................................................................................................................GAACGATCGTTGTGATAT..............................................................................................................18129.0029002400000140000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................19129.0029000012003210200000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................18126.00260020010011110100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAA...........................................................................................................25126.0026001300000670000000
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................20125.0025001610000350000000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................20123.002300810000680000000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................21123.002300900000770000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................21121.002100200100750600000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................19120.0020000000000301700000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATAT..............................................................................................................23119.0019001100000530000000
................................................................................................................................................GAACGATCGTTGTGATATG.............................................................................................................19119.001900600000480100000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18118.0018000000000001800000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25118.0018001400000010300000
...............................................................................................................................................GGAACGATCGTTGTGATAT..............................................................................................................19116.0016001200000220000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................25115.0015001300000000101000
.............................................................................................................................................AAGGAACGATCGTTGTGATA...............................................................................................................20114.0014001200000110000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................23114.001400100001450300000
............................................................................................................................................AAAGGAACGATCGTT.....................................................................................................................15114.001400000001670000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20113.001300000000240700000
............................................................................................................................................AAAGGAACGATCGTTGTGATAAA.............................................................................................................23112.001202400000310002000
.......................................................................................................................................................................................TATCACAGTGATTTTCCT.......................................................................18111.001100000300110600000
.................................................................................................................................................AACGATCGTTGTGATAT..............................................................................................................17111.001100000000362000000
..............................................................................................................................................AGGAACGATCGTTGTGAT................................................................................................................18111.0011001100000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................25110.001000110000220400000
.............................................................................................................................................AAGGAACGATCGTTGTGAT................................................................................................................19110.001000900000000100000
............................................................................................................................................AAAGGAACGATCGTTG....................................................................................................................16110.001000000000451000000
............................................................................................................................................................................................CAGTGATTTTCCTTTATA..................................................................1819.00900000000270000000
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2119.00900700000010001000
..............................................................................................................................................................................................GTGATTTTCCTTTATA..................................................................1618.00800000000620000000
...............................................................................................................................................GGAACGATCGTTGTGATA...............................................................................................................1818.00800300000140000000
.............................................................................................................................................................................................AGTGATTTTCCTTTAT...................................................................1618.00800000000800000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................2317.00700000000100600000
..............................................................................................................................................AGGAACGATCGTTGTGATA...............................................................................................................1917.00700600000010000000
...........................................................................................................................................AAAAGGAACGATCGTTGTGAT................................................................................................................2117.00700600000010000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................2316.00600000000100500000
........................................................................................................................ATTCATCGGGCCATTCGCTA....................................................................................................................................2016.00600600000000000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................2016.00600010100010300000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................2216.00600000000320100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................2416.00600000000110400000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTC...........................................................................................................2515.00500400000010000000
dm3
CGAGTC---AAGAAATTA---------------------------------------------------TGT-------TAAGT---GAT--------CCCC-A--------------A-ATTCATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TT--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTTTA--AAGTCCACAACTC---ATCAA-GGAAAATG---AAAG--TC--AAAGTTGGCASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................2311000024.0010000240000901821884576116301200000040800820100000160193341410313501291331312123283000000000000000000000000310002855254128050921826560333216124120292013211110140114164381100298013111308391201099320100000000317008361651676532916740257211326171960291844303132101170961026570110091106193161172122042757710201068411285361256823090001626134323717341362717439223715962172162713000002114310650822047323056732361729321051383712937514337201744291892317691515232238192625671914625156684134716100361322331910751721781201532184255710251163817812521113750724101643111010240
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................221136122.001361220000315486131818440100000000250023010000010260311018160215434010460270000000000000000000001533014815163157326372793224694121511632119385701311313013500015742061680032000110010000000003200394198921522265396804151118471132010120060021440111024110516225615002207317411000106980310415912522400036201017208122315523134361563139114534652283000044243866322250215214010055801140520547304643522243322164101277101371110118864342137322613504124215441183334523424716910822278146110136123681264828107316111660
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................23147228.004722800002052527178241000000000000001020051101390000000000000002110003000000000000000000010111123512521450726201220810411310400933859031820631091119548845030350003510000700000000000243658749103356300010000000000000000153809429130503015100010310001000000000000000000000510000396512120183961788150110000028718910000000006001021910000000000101001000301100001010146811741140030100001632101010000100002028381101100
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................22117174.00171740000207951181031110000000001000100000001900000002071000100100012000000000000000000431401898770160622711773267760316024722632111711038572041001334423502000011404066000000000010941389921014000000570000000000000153201620816012061152024005901020000000000000000000000001002880215082439626160214000054442602110021026101121400010000000411071402166900203212531649291040130000012420160200002010040910140212220
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................21113538.0013538000000440323900100000000020010000000010160100012301000100300000100000000000000000000100040613918776144002030021001153640052105000121400340000000000000010000000009445885112922130111100305100050010039011000110220001001330110000020013050730000001110102111012650463271019000090551702000000201000026100001211123112118062101421134334332573757329138011204122226418220414030080948370412150
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................20111581.0011581000000000200000000000000001000000086480000000108000002000000000000000000000000001100422016000001000100010000000000002200000000000000000001000000464144381012000032000000003001000202000010000040031012001000000114050500000100096623283512070121700150000146133002200011020301313020003000004000219041100523212213542011614113110024355361072085458714347211103225986731259440
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................2316896.006896000000052000000000000000000000000030001011102010000000000000000000000000000000000885123345641210001000100100000000230106009000000000000000000000000117836878104520011000000000010000010000000010000000121100010000000011003000000000002000100050382020000268811000000000000001110010000010202001020100001000011204318101201010020102020004010050100200780301000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................2213934.003934000000844174000000000000000000000000400000000000000000000000000000000000000000000009124212142341940012040000013011000122300005940470000000030000000000000001754506012000000000000000000000613000101110000000000500000000002000000000000000000002309041090000000003619000000000000000150000000000000000000000100000000112302611000000000050000000000000000101060000100
.........................................................................................................................TTCATCGGGCCATTCGCTA....................................................................................................................................1912959.0029590000000000000000000000000000000000420000000000000000000000000000000000000000000000300132141239201000200200201010000044653004721158000000000000000000000000242209488136230000000000000000000000000000000100100000000000000001000000000000000000000000001010000000037220000001000000000100000000000000000000000000000001560200000000000000000000001000000000010000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................2112939.00293900000032014600000000000000000000000090000000000000000000001010000000000000000000000546151331425610001000340072310010062110068100420000000000000000000000001757108356100000000000000000000050210211101050000008000100000000000000000000000000011306237064000100005461000000000010000010000000001000001700030000000100057611000000020000000000001010000000000400000100
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................2312237.0022370000004840000000000000000000000000000000000010000000000000000000000000000000000001075047000000000000000020000000002003000000000000000000000000261771995681010000010000000000000001000000000000000010001000000000000000000001000000000004020000000037260000000000000000100000000000000024000101000000001135812100000210000000000001001010000000520000010
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................2411676.001676000000167000000000000000000000000010000000001000000000000000000000000000000000000371987851001000000002000000000000014107000000000010000000000000413252101000000000000000000000000000000000000000001000000001807000300000000000001010102604000000003935000000000000000010000000000000000014240201000000084033700000100000001021010110130000003060001000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2411627.001627000000058100000000000000000000000010000000000100000000000000000000000000000000000631168772000010000001001200000100011401000010000000000000000000732451602000000000000000001000000001100000100000020000000000008010200000000000100040314412810105000055450000100000000000200000000000100022001504001000101755235001001000100020100130200000002049120000000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATATG.............................................................................................................2411316.001316000020416974000000000000000000000000000000000000000000000000000000000000000000000004651111561757000000000400010040000617000502029000000000000000000000000073000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................2311250.0012500000001819544130000000000000000000000003000000000100000000000000000000000000000000000011348252630000000000000000000018600010101200100000000000000000000011768012000000000000000000000000000000000000000000001000000000000000000000000000000000030600000000191301001000000000000000000000000000030001010000000014204900001101000000023000000010000102210000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................2411108.001108000000041030100000000000000000000002000000000000010000000100000000000000000000000010658159104221000010010041100001018000427080000000000000000000000001248512410000000000000000000000000000000000000000000000000000000000200000000000000120703123500000000141100000000000000002000000000000000000001000000000003071000000000000000000000000000000000000000000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................2211009.0010090000005361110000000000000000000000001000000000000000000000000000000000000000000000033838821022700000100000000000000870002610100000000000000000000000003442921700000000000000000000000000000000000000000000000000000000000000000000002000021019150000000010900000000001000000000000000000000000000000000000001421500000000000000000000000000000000130000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................241768.007680000000000000000000000000000000000400000000000000000000000000000000000000000000001705410000000000010000000000000200000000000000000000000000014567018000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000301600000000000000001000000000000000010000000000010004467300100000000000000000000000000000130100000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATAT..............................................................................................................231678.00678000000139520000000000000000000000000000000000000000000000000000000000000000000000026651105117130000000100011040000112000203027000000000000000000000000011000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000011000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................231647.0064700000001100000000000000000000000000000000000100000000000000000000000000000000000090861000000000000000000000000020000000000000000000000000003674772461000000000000000000000000000000000000000000000000000000000200000000000000000101020001000013700000000000000001000000000000001000000000000000003263900000000000000000000010001000000130000000
........................................................................................................................ATTCATCGGGCCATTCGCTA....................................................................................................................................201592.00592000010110000000000000000000000000024000000000000000000000000000000000000000000000031009000010000000000000000100000000000000000000000000000002891138321100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000220000000000000000000000000000000000000000000000000242000000000000000002000000000000000010000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221531.0053100000011071000000000000000000000000020000000000000000010000000000000000000000000000441123161000001000001000100000000040040000000000000000000000001030252200001000000000010000000000000000010000000000000000000000000000000000010010110010010030000111400000000000000000000000000000000000100020100000002404000000000000000100000011000000000100000000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................191512.00512000000000000000000000000000000000021000000000010000000000000000000000000000000000006000000000000000000100000000000001000000000000000000000000313170050000000000000030000001000000000100000000100000000000000000000000000000000000030110000000261500000000000000000000000000000001010011000200010126810400100000000111010108000000000400120000000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................211401.00401000000186400000000000000000000000020000000000000000000000000000000000000000000000138136468170000000000011020000023000203040000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000102014030000000010000000000000000000000000000000000000000000001000016300000000000000000000000000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................211354.003540000001313000000000000000000100000300000000000000000000000000000000000000000010004527263250000100000021000000004000231040000000010100000000000001083800000000000000000000000000100011100000001010000000000000000000000000000010040009021110100001013100000000000000010000010000000000000000000100100052800000000000040000100000000000000200000000
.........................................................................................................................TTCATCGGGCCATTCGCTAC...................................................................................................................................201345.0034500000000000000000000000000000000003450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................181290.0029000000000000000000000000000000000000000000000100000000000000000000000000000000000010003000000000000000000000000000000000000000000001030000002721280220000000000000000000000000000000100000000000000000000000000000000000000000000000000000000191200000000000000000000000000001000000000000000000001243600000000000211000000000000001000101100000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................211284.002840000000300000000000000000000000000000000000000000000000000000000000000000000000009131472260000000000000200000004000160013000000000000000000000000011700000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000020000000000000000000000000000000034000000000000000000000000000000000000000000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................231237.00237000000011000000000000000000000000010000000000000000000000000000000000000000000000472081210000000000000000000000000110000000000000000000000000008910800000000000000000000000000000000000000000000000000000000000000000000000000000000030000000064000000000000000000000000000000000000000000000000084300000000000000000000000000000000000000000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................181163.001630000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000131150000000000000000000000000000000000000000000000000000000050200000000000000000000000000000000650000000000000000000000000000000000000001000000000105900000000000000000000000000000000000000000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................191154.001540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129242300000000000000000000000100000000000000000000000000000000000000000000000000000001030000000032000000000000000010000000000000000000000000000000065100000000000000000000000000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................231151.00151000000000000000000000000000000000000000000000000000000000000000000000000000000000200340000000000000000000000000001010000000000000000000000000201100000000000000000000001000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000104200000000000000000000000000000000000000000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................211148.0014800000002000000000000000000000000000000000000000000000000000000000000000000000000048226121200000000000000000000020004004000000000000000000001000301020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041000000000000000000000000000000000000000000000000019500000000000000000000000000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................201145.0014500000000110000000000000000000000004700000000030000010000000000000000000000000000004224000000000000000000000000001300010000000000020000000000112000000000000000000000000202000000000100000010000000000000000000000000000000090005040001000055001000005000000120000000010000000000000001010000012700000000000000000000000000000200000000010
................................................................................................................................................GAACGATCGTTGTGATATG.............................................................................................................191133.0013300000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000010000000000000000000000000006965000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000105000000000000000000000000000000001000000000000000077700000000000000000000000000000000000000000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................221127.00127000000001000000000000000000000000000000000000000000000000000000000000000000000000407200000000000000000000000000210700000000000000000000000010220400000000000000000000000000000000000000010000000000000000000000000000000000100000000000000860000000000000000000000000000000000000000000000000312700000000000000000000000010000001540000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................231125.001250000000102000000000000000000000000100000000000000000000000000000000000000000000001772613700000000000000000000000001008000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000005080000000011000000000000000000000000000000000000000000000000025000000000000000000000000000000000000000000
.........................................................................................................................TTCATCGGGCCATTCGCTACTG.................................................................................................................................221117.0011700000000000000000000000000000000001170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................221108.00108000000522109000000000000000000000000000000000000000000000000000000000000000000000009143100000000000001010000010000100000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000001000000000002012001000033000000000000000000000000000000000000000000000000016500000001000000000000010000000100000000000
......................................................................................................................................................................................ATATCACAGTGATTTTCCTTTATA..................................................................241107.001070000000010000000000000000000000000000000000000000000000000000000000000000000000003041511200000000000000000000100001001000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000037000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................181100.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317317400000000000000000000000000000010000000000000000000000000000000000000000000001010300000000470000000000000000000000000000100000000000000000000101000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGATC..........................................................................................................26194.009400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATC...............................................................................................................21176.007600000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000342000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000120000000000000000000000000000000000000000000000000362000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20176.0076000000001000000000000000000000000000000000000000000000000000000000000000000000000210721301000000000000000000020001010000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000112000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
droEre2
AGAGTT---AGCAAATCC---------------------------------------------------AGT-------TAAGT---GAT--------CCCC-T--------------A-ATTTGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTAAA--AAGTCCAAAACTC---ATCAATGGGAAATG---AAAG--CC--AAAGTTGCCASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................2316818.00681811512632230038166
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2213303.003303361170401233140
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2212638.00263830013661954980
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2312516.00251651214570545020
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................211465.00465282610174110
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211324.00324481520123010
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221229.0022952143034000
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................201229.002294740145240
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................231194.001948280158000
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221112.00112110803000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................221109.00109107101000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................221103.0010309904000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21166.00661534017000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................24165.00651032023000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................24155.005534209100
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................23143.0043414025000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20137.003718028000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21134.003431201000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................24130.003061608000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24119.001901207000
.........................................................................................................................TTTGACGGGCCGTTCGCTA....................................................................................................................................19117.001740013000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18116.001601015000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19113.00130606010
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................21111.001101100000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................23110.00103403000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................24110.00101306000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23110.00100901000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................2319.0092007000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................2018.0082204000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................2017.0070700000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC.................................................................2416.0060600000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................1916.0061104000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................2116.0060501000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1915.0050203000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................2514.0040102100
............................................................................................................................................AAAGGAACGATCGTTGTGATACT.............................................................................................................2314.0040103000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................1814.0040102010
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG..................................................................2314.0041201000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................2114.0043100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................2313.0030201000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................2013.0033000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT..................................................................2213.0030102000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTATA..................................................................2013.0031200000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTAT...................................................................1913.0031101000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................2313.0030102000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................1812.0020002000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................2212.0020101000
.............................................................................................................................................AAGGAACGATCGTTGTGAT................................................................................................................1912.0021100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATTA............................................................................................................2412.0020002000
................................................................................................................................................GAACGATCGTTGTGATATG.............................................................................................................1912.0021001000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................2512.0020101000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................2212.0021001000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................2112.0021100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCT.......................................................................1812.0020001010
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................2012.0022000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAAT.............................................................................................................2312.0020002000
droYak3
CGGGTC---AAGAAATCG---------------------------------------------------AGT-------TAAGT---GTT--------CCCC-C--------------A-ATTTAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TC--C--CTAACATATCACAGTGATTTTCCTTTATAACGCATGTACA--AAGTCCACAACTC---ATCAA-GGGAAATG---AAAG--CC--AAAGTCGGCASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................231203258.0020325828641926911043572652000
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................22176864.00768642831739572786425951180
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................21110780.0010780215104113361101040
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................2215615.00561500561140000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2213667.003667032191217230000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2313427.003427013198614280000000
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2012567.00256736223301940130010
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................2311430.001430001370600000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2411377.001377201346280100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241748.0074800729180100000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211505.00505013271770000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221481.00481033671110000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................241426.0042600407190000000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................201396.003964039200000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................231325.0032500311140000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................231246.0024600235110000000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................221193.001930718510000000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................191153.001534013990001000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................221116.001160011330000000
.........................................................................................................................TTTAACGGGCCGTTCGCTA....................................................................................................................................19194.00940056380000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21190.00900367200000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................24173.00730136360000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................22171.0071006740000000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23167.0067006520000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20159.0059009500000000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21153.0053035000000000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................21149.0049004900000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................24147.0047004430000000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................21132.0032003110000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................21130.0030003000000000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18124.0024002220000000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................19120.0020015140000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20120.0020011090000000
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................21120.0020002000000000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................18117.0017001700000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................21114.0014011210000000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................20114.0014001400000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................23113.0013001030000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25113.0013001120000000
............................................................................................................................................AAAGGAACGATCGTTGTGATC...............................................................................................................21112.001200930000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................20112.0012001110000000
.............................................................................................................................................AAGGAACGATCGTTGTGATAC..............................................................................................................21111.0011001100000000
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................20111.0011001100000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATTT............................................................................................................24111.0011001100000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................25111.0011001100000000
droEug1
CAAGCC---A-----------------------------------------------------------AGT-------TAAGT---GTT--------ACCA-A--------------A-ACTACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TT--T--GTTACATATCACAGTGATTTTCCTTTGTAACGCATGTCTA--ATGCCCACTATTC---ATCAA-GGTTATTA---AA----C----------TAASizeHit CountTotal NormTotal
No Reads
droBia1
CAAGCC---A-TAAATCA---------------------------------------------------ATT-------TGAGT---GAT--------CCCC-A--------------C-GTATCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCATG--AAGCCCAAAGCTC---ATCAA-GGGAAATA---CCAT--CC--GAAATTACCTSizeHit CountTotal NormTotal
No Reads
droTak1
CAAGCC---AGTGAATTA---------------------------------------------------AGT-------TGAGT---GAT--------CCCA-G--------------C-ATAACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TC--C--GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCTT--AAGCCCCAAAAAC---ATCAA-GGGATATACTATTAA--CC---------AAGSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGCC---AATACAAAA---------------------------------------------------AGT-------TGAGT---GAA--------CCCC-G--------------C-TTACTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TC--C--TTAACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GAGCCCAAAACTC---ATCGATGGGAAATA---CAAT--CC--AAA---AACASizeHit CountTotal NormTotal
No Reads
droRho1
CAATTC---AATAAAACA---------------------------------------------------AGT-------TGAGT---GAT--------CCCT-A--------------C-ATTTTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TC--C--GTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GAGCCCAATACTC---ATCGA-GGGAAATA---AGAT--TC--GAAATTATCASizeHit CountTotal NormTotal
No Reads
droFic1
CAA------------TAA---------------------------------------------------AGT-------TTAGT---GAT--------TCCT-A--------------A-AGTACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TT--A--GTTACATATCACAGTGATTTTCCTTTATAACGCATGTCG---TTGTCCAAAGCTC---ATCAA-AGGAAAAA---ACATACTT--AAAGTTACAASizeHit CountTotal NormTotal
No Reads
droKik1
TGATATTC-AGGATAT------------------------------------------------------GTCCTAAACCAAGT---GAT--------ATCT-CAA------------G-CTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TC--CCCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTTC---AAGTCCAAGATTC---AACGA-TTGA--T-----------C----AGTTCTAASizeHit CountTotal NormTotal
No Reads
droAna3
TTAACA---AGAATTTCA----------------------------------------------AATGTGAC--TATTCGAAAAAAA-AT-------GTA-AAA--------------T-ATTCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TC-CCTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGCAG---TTGTCCAAAATGC---ATCAA-AAATAACG---A------------GTT---ASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................2313433.0034331402558681212013
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2211891.001891331648199128
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2211454.00145431114125271013
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................231721.007214059387001
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................211243.00243221720031
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................201154.001542105264116
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211147.00147512813001
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221117.0011701170000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................221110.0011001100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21164.00640613000
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................23164.006412139003
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................24164.00642556100
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................22154.00546435000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20123.0023299003
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................24123.00230194000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24119.00190190000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................24117.00170133010
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................20116.00160160000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................22113.00131030000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................21110.00100100000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................1919.009072000
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................2318.008071000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................2517.007043000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................2117.007160000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................2117.007430000
.........................................................................................................................TTCTAAGGACCATTCGCTA....................................................................................................................................1916.006051000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................2316.006060000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................2016.006060000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................2315.005041000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................1815.005031001
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................2115.005230000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1914.004031000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................2314.004040000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA...................................................................2214.004040000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................2314.004040000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTAT...................................................................1914.004040000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTC.....................................................................2013.003030000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................1913.003012000
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................2013.003030000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................2313.003021000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................2413.003030000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG..................................................................2312.002020000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTATA..................................................................2012.002020000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC.................................................................2412.002020000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTTA..........................................................................................................2612.002002000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................2012.002011000
............................................................................................................................................AAAGGAACGATCGTTGTGATATTA............................................................................................................2412.002002000
............................................................................................................................................AAAGGAACGATCGTTGTGATAG..............................................................................................................2212.002002000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................2212.002020000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................1812.002002000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................2512.002000002
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................2212.002011000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTT.....................................................................1912.002110000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................2212.002020000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTGC...................................................................2211.001010000
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2111.001000100
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATATT................................................................2411.001010000
......................................................................................................................T-ATTCTAAGGACCATTCGCTA....................................................................................................................................2111.001010000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT..................................................................2211.001010000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTC....................................................................2111.001001000
droBip1
AAATTT---AAAAAATTA---------------------------------------------------AAT-------AAA------------AAAGTG-AAA--------------T-ATCCTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TC-CCTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGTCA---TTGTCCAAAATTC---ATCAG-AGA--------------TC---GAGTTAGTGSizeHit CountTotal NormTotal
No Reads
dp5
CCTACCACA--ACCAC--ACCCACAC------C-AACACCCACACCCACCCTCACATCCATCCCAGTGTCAT-------TGATT---AGT-------TCC-CAA--------------C-TTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TT-CACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GCGCCCACAGCCA---CACAT-GGGAAACG---AAAC--------GCTCAGCGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................23120861.00208612264210780287312423808
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................22111323.0011323041978584304100010
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................23110758.0010758041884614187200030
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2217060.00706017084499201796050238
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2111461.0014610928840454000292
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221783.00783055589113800000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................221780.00780007770300000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211762.00762041524019600001
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221640.00640016342300000
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................201598.005982262740265170149
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................241570.0057008938319500020
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................221268.002680236250300040
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................241260.0026001615808500010
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................231224.0022411012318800010
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................211202.0020201415313200020
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................241139.001390012201700000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241113.001130177002500010
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................231107.00107018001801070
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21182.008207650100000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................22178.0078024303300000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................20164.006400640000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20160.006002805000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................21160.006000590100000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................21159.0059054101300000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19142.0042022101300033
.........................................................................................................................TCCTAGGGGCCATACGCTA....................................................................................................................................19140.004004403200000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18138.003800203600000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC.................................................................24137.003700370000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................23136.0036002101500000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20135.0035041601500000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................22131.0031021701200000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................21130.003002370000000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23129.002902180900000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................23128.002803170800000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................23126.0026021101300000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................19126.002600402200000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................24124.0024021101100000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................23121.002100180300000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................20117.001704130000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................23115.001501101300000
........................................................................................................................TTCCTAGGGGCCATACGCTA....................................................................................................................................20115.001500101400000
.............................................................................................................................................AAGGAACGATCGTTGTGATA...............................................................................................................20114.001401130000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25114.00140040800020
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................22112.00120150300030
.............................................................................................................................................AAGGAACGATCGTTGTGATATGT............................................................................................................23111.00110920000000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................20110.00100820000000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAC................................................................................................................22110.001000100000000
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................21110.00100160300000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATAT..............................................................................................................2319.0090450000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................1919.0090070200000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................2519.0090270000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAGC................................................................2318.0080050300000
.......................................................................................................................................................................................TATCACAGTGATTTTCCT.......................................................................1818.0080030500000
.................................................................................................................................................................TGCGTTAA-TT-CACCGTTACATA.......................................................................................2217.0070030400000
............................................................................................................................................................................................CAGTGATTTTCCTTTATA..................................................................1817.0070060100000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTAT...................................................................1917.0070300400000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG..................................................................2317.0070050200000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................1816.0060110400000
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................2016.0060420000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA...................................................................2216.0060040200000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTATA..................................................................2016.0060050100000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................2115.0050040100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTC...........................................................................................................2515.0050120100010
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................2415.0050140000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATTT............................................................................................................2415.0050020300000
droPer2
CCTACCACA--ACCAC--ACCCACACCAACACC-AACACCCATACCCACCCTCACATCCATCCCAGTGTCAT-------TGATT--AGCT--------CC-CAA--------------C-TTCCTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TT-CACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGTCT---GCGCCCACAGCCA---CACAT-GGGAAACG---AAACACTC--AGC----GATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2217491.00749169693540826611
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................2316462.006462464568164528517
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2116180.0061806099371133
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2013284.00328431951613222
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................221721.007212247648121
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................241371.00371347418020
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................231353.00353641306000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................221164.0016416003010
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241161.0016115506000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................191125.0012511608001
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................22170.00706811000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................20167.00676700000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................24163.00636300000
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................23158.005842013012
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23151.00515001000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................21146.00463340000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................23142.00423704010
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24139.00393602010
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................22127.00270522000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................22127.00272142000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................21124.00242400000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................22123.00232300000
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................23121.00211505010
............................................................................................................................................AAAGGAACGATCGTTGTGG.................................................................................................................19120.00202000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAG..............................................................................................................22120.00202000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21116.0016448000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25116.00161501000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20115.00150015000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................24111.0011037010
............................................................................................................................................AAAGGAACGATCGTTGTGAG................................................................................................................20111.00111100000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................23110.0010901000
..............................................................................................................................................AGGAACGATCGTTGTGATAT..............................................................................................................2019.009900000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................2119.009801000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................1819.009009000
................................................................................................................................................GAACGATCGTTGTGATAT..............................................................................................................1819.009900000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................2018.008026000
..............................................................................................................................................AGGAACGATCGTTGTGAT................................................................................................................1818.008800000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................2018.008800000
.........................................................................................................................TCCTAGGGGCCATACGCTA....................................................................................................................................1917.007007000
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................2116.006330000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1916.006006000
.............................................................................................................................................AAGGAACGATCGTTGTGATA...............................................................................................................2016.006600000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATAT..............................................................................................................2316.006501000
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................1815.005410000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATAA..............................................................................................................2415.005500000
...........................................................................................................................................AAAAGGAACGATCGTTGTGAT................................................................................................................2115.005500000
...............................................................................................................................................GGAACGATCGTTGTGATAT..............................................................................................................1914.004400000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATA...............................................................................................................2214.004301000
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2113.003200001
..............................................................................................................................................AGGAACGATCGTTGTGATA...............................................................................................................1913.003300000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGA.................................................................................................................2113.003201000
............................................................................................................................................AAAGGAACGATCGTTGTGATATAA............................................................................................................2413.003300000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................2312.002002000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................1912.002002000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAAA..........................................................................................................2612.002200000
.............................................................................................................................................AAGGAACGATCGTTGTGATATGG............................................................................................................2312.002200000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAT.................................................................2212.002002000
...............................................................................................................................................GGAACGATCGTTGTGATA...............................................................................................................1812.002200000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAG.................................................................2412.002011000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................2312.002011000
..............................................................................................................................................AGGAACGATCGTTGTGATATC.............................................................................................................2112.002200000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................2412.002011000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................2112.002002000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................2512.002200000
............................................................................................................................................AAAGGAACGATCGTTGTGATACT.............................................................................................................2312.002200000
.............................................................................................................................................AAGGAACGATCGTTGTGAT................................................................................................................1912.002200000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTT.....................................................................1911.001001000
............................................................................................................................................AAAGGAACGATCGTTGTGATC...............................................................................................................2111.001100000
droWil2
TAAGG-------ACATCA----------------------------------------------------AT-------AGC------------AAAGTT-C--AAGTTTCATCGTCGTTTTTTTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATT-CACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTTCTGTCCAATA--TATCAACAA-----TATC-----CA--GC--AAAGTTTTCASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................23151810.005181038332351336101
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................22123023.002302356158722698104
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................22111546.0011546019601130842
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2314116.00411601150399110
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2112328.00232841100226413
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2011803.0018038868166536
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................2111381.001381030013465
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221408.0040801603911
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................231351.003511013490
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................241283.0028301002730
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241276.002761602690
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................241275.002750502700
.........................................................................................................................TTTTCTGGGCCATTCGCTA....................................................................................................................................191181.001810401770
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................201140.001400101390
.......................................................................................................................................................................................TATCACAGTGATTTTCCT.......................................................................181117.001170001161
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................23182.0082110800
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................22179.00790370420
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21175.0075020721
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................23162.0062010610
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19149.0049100480
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24148.0048000480
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................22147.0047001460
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................18146.0046010450
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................24144.0044010430
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................21131.00310150151
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................22130.0030000300
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................23127.0027000270
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25126.0026000260
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................18124.0024000240
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20122.0022010210
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................21120.0020020180
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................25119.0019000190
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................22114.0014000140
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................22114.0014000140
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................22113.0013010120
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................23113.0013000130
........................................................................................................................TTTTTCTGGGCCATTCGCTA....................................................................................................................................20113.0013000130
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAA...........................................................................................................25112.0012000120
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAT.................................................................22112.0012000120
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23111.0011000110
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................21110.001005050
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTT....................................................................21110.0010000100
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1919.00900090
........................................................................................................................................................................................ATCACAGTGATTTTCCTTT.....................................................................1918.00800080
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................1917.00700070
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................2416.00600060
...................................................................................................................................................................CGTTAGATT-CACCGTTATA.........................................................................................1916.00600060
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................2116.00600060
.................................................................................................................................................AACGATCGTTGTGATATG.............................................................................................................1815.00501040
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAG.................................................................2415.00500050
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................2015.00520021
............................................................................................................................................................................................CAGTGATTTTCCTTTATA..................................................................1815.00500050
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA...................................................................2215.00502030
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTAT....................................................................2115.00501040
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAT.................................................................2314.00400040
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................2014.00400040
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTA...........................................................................................................2514.00400040
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTC...........................................................................................................2514.00400040
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................2313.00300030
............................................................................................................................................AAAGGAACGATCGTTGTT..................................................................................................................1813.00300030
............................................................................................................................................AAAGGAACGATCGTTGTGT.................................................................................................................1913.00300030
.......................................................................................................................TTTTTTCTGGGCCATTCGCTA....................................................................................................................................2113.00300030
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG..................................................................2313.00300030
............................................................................................................................................AAAGGAACGATCGTTGTGATTG..............................................................................................................2213.00300030
............................................................................................................................................AAAGGAACGATCGTTGTGATC...............................................................................................................2113.00310020
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................2012.00211000
............................................................................................................................................AAAGGAACGATCGTTGTGATATAA............................................................................................................2412.00200020
droVir3
ATAATC---TGACCATAT--ATATAT------CTGATATTCT---------------------------CGT-------ATACT----------------AT-A--------------T-ATAAATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TT-AACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GCCCGTAAAGC---AACAC-CACATACG---A--T--CT---ATATCCATGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................23166177.006617729701213801360121122029101040251241043292641675411536188215704310102704298290939452967244945032170358719711171144510649120298932204764024104312426155914761861585499280327
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................22111567.0011567325653522350012011143104024643023141196041071963021921134131971283362382664222975734023183462591101269500211101010312332432512529816216389128
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2116493.00649323341737010000000400001000100110001061122017220016374252943973263004942765173462302811922109077120000302413273242313141343953
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2014656.0046561135214900030620011000001000000010010002220152129282498819116320833136820730624417132183466130001615190011121748396671
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2312561.00256100592200000000070000000020010011118401122474072520000224820262030162912121160002220900001532000000015111231
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2212463.00246302910290000000001732551141140103115442781871478800001148172013292145241726170001212341000151013340000003553421011
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2411002.0010021102540000000001000000000000000000004111450020019123335376144805134383600012218000004911000220141118810
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................231460.00460000113000000000100000000000000000000137200000810101711310237686000121660000041400000043200
..........................................................................................................................................TAAAAGGAACGATCGTTGTGAT................................................................................................................221295.00295000100000000000000000000000000000000000000006216710251432281525220007630000000000000001102
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................221282.00282000279000000000000000000000000000000010000000000000000000000020000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241257.00257200590000000000000000001000000000201361000005110106183141248800024600000541300000075946
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................211173.001730018600000000011000000000000000001062479000001001102124100004120000000100000041110
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................241164.001640001700000000000000100100000000001101725291600000301111220111000370000020500000007513
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................221129.00129000460000000010000000000000010000305111719000002000110100000000140000000500000020000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................231129.00129000730000000000000000000000000100000000000002000033732430002530000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................231127.0012701032010000001000000000000000000000112200000516455311412200019160100000100000000000
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................211105.001050001200000000000000000000000000000000140001414106246173140000230000000800000062211
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................21197.0097000360000000000000000001000000000102132000006550320344110002150000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19178.007802070000000000000000000000001000001100000104662152335431001340000010200000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................23177.0077020130000000000000000000000000000201252000002252411112211000730200001300000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................24175.007500057000000000100000000000000000000100300000001000002110000170000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................22157.005700056000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATATG.............................................................................................................24145.004500000000000000000000000000000000000000000003508113152203000200000000000000000000
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................22140.004000015000000000100000000000000000000233200000002102200200000110000001100000001000
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................20138.003812027000000000000000000000000000000000000000000001102001010200000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25134.00340003000000000000000000000000000000002000000012233321130000420000000000000011000
..........................................................................................................................................TAAAAGGAACGATCGTTGTGATA...............................................................................................................23131.00310002000000000000000000000000000000010000000202210130210000110000000800000021100
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTC...........................................................................................................25128.00280005000000000000000000000000000001000000000101002223110000360000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................20125.002500011000000000000000001100010000000102300000000000000000000050000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATC...............................................................................................................21122.00220104000000000000000000000000000000000000000100220202001000520000000000000000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................21117.00170005000000000000000000000000000020021000000000000000110000000000000300000020000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................20116.00160016000000000000000000000000010010001100000000000000000000010000001000000001110
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................24116.00160001000000000000000000000000000010042300000001001010000000010000000000000000100
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC.................................................................24113.00130006000000000000000000000000000000000000000000000111000000400000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAT...........................................................................................................25113.00130000000000000000000000000000000000000000000001001121210000200000000000000100100
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTCC..........................................................................................................26112.00120000000000000000000000000000000000000000000000200002011000600000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................25112.00120003000000000000000000000000000000121100000000000000001000000000001000000002000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATCC.................................................................24112.00120016000000000000000000000000000000000000000000000001100000300000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGG.................................................................................................................19111.00110100000000000000000000000000000000000000000101100002010000400000000000000000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................21111.00110009000000000000000000000000000000101000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23110.00100003000000000000000000000000000000000000000011001110000000000000000000000000101
............................................................................................................................................AAAGGAACGATCGTTG....................................................................................................................16110.00100000000000000000000000000000000000000000000012011000011000300000000000000000000
..............................................................................................................................................AGGAACGATCGTTGTGATA...............................................................................................................19110.00100000000000000000000000000000000000000000000110100000103000010000010000000010000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................19110.00100000000000000000000000000000000000013100000001000201100000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................2219.0090001000000000000000000000000000000000000000000100001000000310000000000000011000
.........................................................................................................................TAAATTGGGTCATGCTCTA....................................................................................................................................1919.0090000000000000000000000000000000000000000001120001000000000000000000100000020010
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2118.0080001000000000000000000000000000000000000000001010010000000310000000000000000000
...........................................................................................................................................AAAAGGAACGATCGTTGTGAT................................................................................................................2118.0080000000000000000000000000000000000000000000000001041100000100000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGAA...........................................................................................................2518.0080000000000000000000000000000000000001000000000001010000000020000000000000011100
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................1918.0080002000000000000000000000000000000003100000000000000000000020000000000000000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................2318.0080000000000000100000000000000000000002200000010100000000000000000000000000001000
............................................................................................................................................AAAGGAACGATCGTTGTG..................................................................................................................1818.0080003010000000000000000000000000000000100000000000000000000020000000100000000000
..............................................................................................................................................AGGAACGATCGTTGTGAT................................................................................................................1817.0070000000000000000000000000000000000100000001011001000000000000000000000000000101
...........................................................................................................................................AAAAGGAACGATCGTTGTGATA...............................................................................................................2217.0070000000000000000000000000000000000000000000001001112100000000000000000000000000
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................2217.0070003000000000000000000000000000000000000000000000000000000010000000100000011000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................2417.0070004000000000000000000000000000000000000000000000000011000100000000000000000000
...................................................................................................................................................................CGTTCA-TT-AACCGTTACA.........................................................................................1816.0060000000000000000000000000000000010111000000000000000000000020000000000000000000
...........................................................................................................................................AAAAGGAACGATCGTTGTGATAT..............................................................................................................2316.0060000000000000000000000000000000000000000000001201010001000000000000000000000000
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................2316.0060004000000000000000000000000000000000000000001000000000000100000000000000000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATC..................................................................2216.0060006000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................1816.0060000000000000100000000000000000000110000000000001000000000110000000000000000000
................................................................................................................................................GAACGATCGTTGTGATATG.............................................................................................................1915.0050000000000000000000000000000000000001000000000000000000000100000000000000011010
............................................................................................................................................AAAGGAACGATCGTTGTGATATTT............................................................................................................2415.0050002000000000000000000000000000000000000000000000000000000120000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATG...............................................................................................................2115.0050002000000000000000000000000000000000000000000001001000000000000000000000010000
..............................................................................................................................................AGGAACGATCGTTGTGATATGT............................................................................................................2215.0050003000000000000000000000000000000000000000000010010000000000000000000000000000
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................2015.0050000000000000000000000000000000000010100000010001000010000000000000000000000000
...............................................................................................................................................GGAACGATCGTTGTGATATG.............................................................................................................2014.0040001000000000000000000000000000000000000000110000000000000000000000000000010000
..........................................................................................................................................................................................CACAGTGATTTTCCTTTATA..................................................................2014.0040002000000000000000000000000000000011000000000000000000000000000000000000000000
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTTC..........................................................................................................2614.0040002000000000000000000000000000000000000000000000000000000200000000000000000000
droMoj3
CATCT----A-----------------------------------------------------------TGA-------AAAGT---TTTTATGAAAGTT-C--AAAATGCAAACTCGA---TGAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TC-GACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCA------GTCCCCCAGAC---TACAA-----TATG---AATG--TG-AATATTTATAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................231103385.00103385208896689444411
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................22163878.006387823480521590461
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................22162994.006299462770316020410
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................23157007.00570076209100549100
............................................................................................................................................AAAGGAACGATCGTTGTGATA...............................................................................................................2117688.00768803760173110
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT...................................................................2115487.00548712900051960
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA..................................................................2214838.00483801060047320
............................................................................................................................................AAAGGAACGATCGTTGTGATAC..............................................................................................................2214143.004143030041400
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC...................................................................2213555.0035550100035450
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC..................................................................2311942.0019422240019160
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2411743.0017430810016620
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2011261.00126122270210228
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................2111095.0010951300010640
............................................................................................................................................AAAGGAACGATCGTTGTGATATT.............................................................................................................2311093.0010930811010110
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA.................................................................2411051.0010511108009420
............................................................................................................................................AAAGGAACGATCGTTGTGATATGC............................................................................................................241829.00829097007284
............................................................................................................................................AAAGGAACGATCGTTGTGATATGA............................................................................................................241578.00578038105390
............................................................................................................................................AAAGGAACGATCGTTGTGATATC.............................................................................................................231468.00468029004390
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC...................................................................211292.0029200002920
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATA..................................................................211260.00260011002490
.............................................................................................................................................AAGGAACGATCGTTGTGATATG.............................................................................................................221256.0025614002510
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT.................................................................241188.00188027001610
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT..................................................................231177.0017705001720
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC.................................................................241173.0017301001720
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTAT...................................................................201173.00173016001570
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATC..................................................................221160.0016010001590
.............................................................................................................................................AAGGAACGATCGTTGTGATAT..............................................................................................................211142.0014200001420
...........................................................................................................................................................................................ACAGTGATTTTCCTTTAT...................................................................181132.0013205700750
............................................................................................................................................AAAGGAACGATCGTTGTGATATA.............................................................................................................231130.00130013001170
............................................................................................................................................AAAGGAACGATCGTTGTGAC................................................................................................................201130.0013000001300
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTC...........................................................................................................251113.0011313200800
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA.................................................................231110.0011005001050
..........................................................................................................................................................................................CACAGTGATTTTCCTTTAT...................................................................191108.0010801001070
..........................................................................................................................................................................................CACAGTGATTTTCCTTTATA..................................................................201103.0010300001030
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTT.....................................................................201101.0010134000580
...........................................................................................................................................................................................ACAGTGATTTTCCTTTATA..................................................................19195.009502700680
............................................................................................................................................AAAGGAACGATCGTTGTGA.................................................................................................................19181.00810210780
............................................................................................................................................................................................CAGTGATTTTCCTTTATA..................................................................18179.00790000790
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTA....................................................................20179.00790300760
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG..................................................................23153.00530100520
.........................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA.................................................................22152.00520300490
............................................................................................................................................AAAGGAACGATCGTTGTGATATGTT...........................................................................................................25147.004702600210
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA................................................................25145.00450300420
............................................................................................................................................AAAGGAACGATCGTTGTGATAA..............................................................................................................22140.00400100390
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATCC.................................................................24136.00360000360
..............................................................................................................................................AGGAACGATCGTTGTGATATG.............................................................................................................21133.00331000320
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT..................................................................22130.00300000300
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAC.................................................................23129.00290000290
........................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAT.................................................................23128.00280300250
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA...................................................................22128.00280000280
............................................................................................................................................AAAGGAACGATCGTTGTGATACC.............................................................................................................23127.00270100260
............................................................................................................................................AAAGGAACGATCGTTGTGATATGG............................................................................................................24125.00250100240
.......................................................................................................................................................................................TATCACAGTGATTTTCCTT......................................................................19124.00240100230
.............................................................................................................................................AAGGAACGATCGTTGTGATA...............................................................................................................20121.00210000210
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................21121.00211100190
......................................................................................................................A---TGAATGGGCCATGCGCTA....................................................................................................................................19121.00210500160
droGri2
TTATAT---AGTGTATAT----------------------------------------------AATAT--TCC-----TGATATAT-GT-------GTT-AAA--------------G-TCGTTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCT----CTGCCCAAAACTC---AACTA---------------A--CCA-GTGTTGAATASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................AAAGGAACGATCGTTGTGATATG.............................................................................................................2325.001055
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT...................................................................2222.00440
............................................................................................................................................AAAGGAACGATCGTTGTGATAT..............................................................................................................2221.50321
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTA....................................................................2121.50330
............................................................................................................................................AAAGGAACGATCGTTGTGAT................................................................................................................2020.50101
............................................................................................................................................AAAGGAACGATCGTTGTGATT...............................................................................................................2120.50101
............................................................................................................................................AAAGGAACGATCGTTGTGATATGT............................................................................................................2420.50101
.......................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA..................................................................2320.50110

Generated: 10/20/2015 at 07:33 PM