ID:

dse-mir-316

 Coordinate:

scaffold_11:1581882-1581970 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.8 -28.5

Flybase annnotation

intron [Dsec\GM22120-in]; pre_miRNA [Dsec\mir-316-RM]; utr3 [utr3_minus_6480]; miRNA [Dsec\miR-316-RA]

No Repeatable elements found

Sense Strand Reads

TCTCATCAAGGCGCCATGTGTGCGGATCGGTATGTGAAAAGTGGATACACAAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCAGGTGATCCAGGTGTGTATAGTATTAGAAAGTATTT

**************************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V113

male body		 V115

head
.................................................................TGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 0 1 26782.00 26782 14797 9911 889 1185
.................................................................TGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 0 1 5570.00 5570 1962 2586 847 175
.................................................................TGTCTTTTTCCGCTTACTGG........................................................................................................ 20 0 1 5359.00 5359 5008 34 98 219
.................................................................TGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 0 1 4633.00 4633 4318 77 88 150
..................................................................GTCTTTTTCCGCTTACTGGCG...................................................................................................... 21 0 1 1195.00 1195 1188 6 0 1
.................................................................TGTCTTTTTCCGCTTACTGGCGA..................................................................................................... 23 1 1 1037.00 1037 716 30 132 159
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTA................................................................ 22 0 1 348.00 348 51 129 167 1
..................................................................GTCTTTTTCCGCTTACTGG........................................................................................................ 19 0 1 319.00 319 318 0 0 1
.................................................................TGTCTTTTTCCGCTTACTGGCGTT.................................................................................................... 24 0 1 284.00 284 87 114 67 16
..................................................................GTCTTTTTCCGCTTACTGGC....................................................................................................... 20 0 1 278.00 278 278 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGA....................................................................................................... 21 1 1 219.00 219 180 0 10 29
.................................................................TGTCTTTTTCCGCTTACTGGCT...................................................................................................... 22 1 1 139.00 139 100 2 22 15
.................................................................TGTCTTTTTCCGCTTACTGGCA...................................................................................................... 22 1 1 121.00 121 91 7 8 15
.................................................................TGTCTTTTTCCGCTTACTGGCGG..................................................................................................... 23 1 1 114.00 114 114 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCGT..................................................................................................... 22 0 1 109.00 109 106 2 0 1
.................................................................TGTCTTTTTCCGCTTACTG......................................................................................................... 19 0 1 99.00 99 85 1 1 12
.................................................................TGTCTTTTTCCGCTTACTGGT....................................................................................................... 21 1 1 92.00 92 68 0 5 19
.................................................................TGTCTTTTTCCGCTTACTTGCG...................................................................................................... 22 1 1 86.00 86 77 4 5 0
.................................................................TGTATTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 83.00 83 78 4 0 1
.................................................................TTTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 82.00 82 70 12 0 0
.................................................................TGTCTTTTTCCGCTTACTGGGG...................................................................................................... 22 1 1 80.00 80 78 2 0 0
.................................................................TGTCTTTTTCCGTTTACTGGCG...................................................................................................... 22 1 1 74.00 74 4 69 1 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAT.................................................................................................... 24 1 1 73.00 73 22 1 36 14
.................................................................TGTCTTTTTCCGCTTACTGGCGAA.................................................................................................... 24 2 1 66.00 66 22 1 23 20
.................................................................TGTCTCTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 63.00 63 14 46 1 2
...................................................................TCTTTTTCCGCTTACTGGCG...................................................................................................... 20 0 1 62.00 62 58 4 0 0
.................................................................TGTCTTTTTCTGCTTACTGGCG...................................................................................................... 22 1 1 58.00 58 11 42 1 4
.................................................................TGTCTTTTTTCGCTTACTGGCG...................................................................................................... 22 1 1 57.00 57 7 50 0 0
....................................................................CTTTTTCCGCTTACTGGCG...................................................................................................... 19 0 1 53.00 53 48 4 1 0
.................................................................TGTCTTTTTCAGCTTACTGGCG...................................................................................................... 22 1 1 52.00 52 44 6 1 1
..................................................................GTCTTTTTCCGCTTACTGGCGA..................................................................................................... 22 1 1 49.00 49 49 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTA.................................................................................................... 24 1 1 48.00 48 17 4 15 12
.................................................................TGTCCTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 47.00 47 19 26 2 0
................................................................CTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 47.00 47 40 6 0 1
......................................................................................................GACAGGAAAGGGAAAAAGGCGTA................................................................ 23 0 1 45.00 45 5 32 8 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................. 21 0 1 44.00 44 6 6 32 0
.................................................................TGGCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 43.00 43 39 4 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGC..................................................................................................... 23 1 1 42.00 42 12 23 3 4
.................................................................CGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 40.00 40 26 13 0 1
.....................................................................TTTTTCCGCTTACTGGCG...................................................................................................... 18 0 1 39.00 39 31 7 0 1
.................................................................TGTCTTTTTCCGCTTACTGCCG...................................................................................................... 22 1 1 36.00 36 25 10 1 0
.................................................................TGTCTTTTTCCGCTTACTGTCG...................................................................................................... 22 1 1 35.00 35 26 6 3 0
.................................................................TGTCTTTTTCCTCTTACTGGCG...................................................................................................... 22 1 1 34.00 34 21 10 1 2
.................................................................TGTCTTTTTCCGCTTTCTGGCG...................................................................................................... 22 1 1 34.00 34 29 4 1 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTT................................................................................................... 25 0 1 32.00 32 13 7 8 4
.................................................................TGTCTTTTTCCGCTTATTGGCG...................................................................................................... 22 1 1 32.00 32 0 30 0 2
.................................................................TGTATTTTTCCGCTTACTGG........................................................................................................ 20 1 1 32.00 32 31 0 0 1
.................................................................TGTATTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 31.00 31 31 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGACG...................................................................................................... 22 1 1 29.00 29 23 3 0 3
.................................................................AGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 27.00 27 26 0 0 1
.................................................................GGTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 25.00 25 24 1 0 0
.................................................................TGCCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 25.00 25 13 10 0 2
.................................................................TGTCTTTTTCCGCTTACTAGCG...................................................................................................... 22 1 1 24.00 24 11 6 6 1
.................................................................TGTCTTTTTCAGCTTACTGG........................................................................................................ 20 1 1 23.00 23 22 0 0 1
.................................................................TTTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 23.00 23 23 0 0 0
.................................................................TTTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 23.00 23 23 0 0 0
.................................................................TGTCTTTTTCCGCTTACT.......................................................................................................... 18 0 1 23.00 23 23 0 0 0
.................................................................TGTCTTTTTCCGCTTACTTG........................................................................................................ 20 1 1 23.00 23 22 0 1 0
.................................................................TGTCTTTTTCCGCTTACCGGCG...................................................................................................... 22 1 1 21.00 21 12 8 0 1
.................................................................TGTCTTTTTCCGCTTACTGT........................................................................................................ 20 1 1 21.00 21 16 0 4 1
.................................................................TGTCTTTTTCCGCTTACTGA........................................................................................................ 20 1 1 20.00 20 19 0 0 1
.................................................................TGTCTTTTTCCGCCTACTGGCG...................................................................................................... 22 1 1 20.00 20 9 7 2 2
.................................................................TGTTTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 20.00 20 7 13 0 0
.................................................................TGTCTTTTTCCCCTTACTGGCG...................................................................................................... 22 1 1 19.00 19 5 12 1 1
.................................................................TGTCTTTTTCCGCTTACTGGG....................................................................................................... 21 1 1 19.00 19 19 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAA................................................................................................... 25 2 1 19.00 19 7 1 5 6
.................................................................TCTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 19.00 19 4 12 2 1
...................................................................TCTTTTTCCGCTTACTGG........................................................................................................ 18 0 1 18.00 18 18 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCT...................................................................................................... 21 1 1 18.00 18 18 0 0 0
.................................................................TGTCTTCTTCCGCTTACTGGCG...................................................................................................... 22 1 1 18.00 18 7 10 0 1
...................................................................TCTTTTTCCGCTTACTGGC....................................................................................................... 19 0 1 18.00 18 18 0 0 0
..................................................................GTCTTTTTCCGCTTACTGGCGG..................................................................................................... 22 1 1 18.00 18 18 0 0 0
.................................................................TGTCTTTTTCCGTTTACTGGCGT..................................................................................................... 23 1 1 17.00 17 0 17 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCC...................................................................................................... 22 1 1 17.00 17 11 6 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGC................................................................... 19 0 1 17.00 17 1 12 4 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAA............................................................... 23 1 1 17.00 17 5 1 11 0
.................................................................TGTCTTTCTCCGCTTACTGGCG...................................................................................................... 22 1 1 16.00 16 6 9 0 1
.................................................................TGTCTTTTTCCGCTTACTTGC....................................................................................................... 21 1 1 16.00 16 16 0 0 0
.................................................................TGTCTTTTTCCGCTCACTGGCG...................................................................................................... 22 1 1 16.00 16 8 7 1 0
.................................................................TGTCTTTTTCCGCTTACTCGCG...................................................................................................... 22 1 1 15.00 15 6 5 3 1
.................................................................TGTCTTTTTCCGCTTACTTGCGT..................................................................................................... 23 1 1 15.00 15 7 1 7 0
.................................................................TGTCTTTTTCCGCTTACTGC........................................................................................................ 20 1 1 15.00 15 13 0 0 2
.................................................................TGGCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 15.00 15 15 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGGC....................................................................................................... 21 1 1 14.00 14 14 0 0 0
.................................................................TGTCTTTTTCCACTTACTGGCG...................................................................................................... 22 1 1 14.00 14 5 6 1 2
.................................................................TGTCTTTTTCCGCTTCCTGGCG...................................................................................................... 22 1 1 14.00 14 0 14 0 0
.................................................................TGTCCTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 14.00 14 3 10 1 0
.................................................................TGTCTTTTTCCGCTTACTGCG....................................................................................................... 21 2 1 14.00 14 11 2 1 0
...................................................................TGTCTTTCCGCTTACTGGCG...................................................................................................... 20 2 1 14.00 14 7 6 1 0
..................................................................GTCTTTTTCCGCTTACTGGCA...................................................................................................... 21 1 1 14.00 14 14 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGTC....................................................................................................... 21 1 1 13.00 13 12 0 1 0
................................................................GTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 13.00 13 13 0 0 0
.................................................................TGTCTTTTTCCGCTTACCGG........................................................................................................ 20 1 1 13.00 13 13 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAT............................................................... 23 0 1 12.00 12 6 0 6 0
.................................................................TGTATTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 12.00 12 12 0 0 0
.................................................................TGTCTTTTTCCGCTTGCTGGCG...................................................................................................... 22 1 1 12.00 12 3 9 0 0
.................................................................TGTCTCTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 12.00 12 2 9 1 0
................................................................TTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 0 1 12.00 12 12 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGTG...................................................................................................... 22 1 1 12.00 12 5 5 1 1
................................................................CTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 12.00 12 12 0 0 0
.................................................................GGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 11.00 11 11 0 0 0
................................................................ATGTCTTTTTCCGCTTACTGGCG...................................................................................................... 23 1 1 11.00 11 11 0 0 0
.................................................................TATCTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 11.00 11 4 5 1 1
.......................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................. 20 0 1 11.00 11 4 0 5 2
.................................................................TGTCTTTTTCCGCTTACTGGAG...................................................................................................... 22 1 1 11.00 11 0 8 2 1
.................................................................TGTCTTTTTCCGCTTACTGGTGT..................................................................................................... 23 1 1 10.00 10 0 10 0 0
.................................................................TGTCTTTTTCAGCTTACTGGCGT..................................................................................................... 23 1 1 10.00 10 7 2 1 0
.......................................................................................................ACAGGAAGGGGAAAAAGGCGTA................................................................ 22 1 1 10.00 10 2 1 6 1
.................................................................TGTCTTTTTCCGCTAACTGGCG...................................................................................................... 22 1 1 10.00 10 1 9 0 0
.................................................................TGTCTTTTTCCGCTTACTCGCGT..................................................................................................... 23 1 1 10.00 10 3 3 4 0
.................................................................TGGCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 10.00 10 10 0 0 0
.................................................................TGTCTTTTCCCGCTTACTGGCG...................................................................................................... 22 1 1 10.00 10 2 8 0 0
.................................................................TGTCTTTTTCCGCTTACTAGCGT..................................................................................................... 23 1 1 10.00 10 1 1 8 0
.................................................................TGTCTTTTTCCGCTTACTGGAA...................................................................................................... 22 2 1 10.00 10 7 0 1 2
.................................................................TGTCTTTTTCCGCTTACTGGGGT..................................................................................................... 23 1 1 9.00 9 8 1 0 0
....................................................................CTTTTTCCGCTTACTGGC....................................................................................................... 18 0 1 9.00 9 9 0 0 0
.................................................................TGTCCTTTTCCGCTTACTGG........................................................................................................ 20 1 1 9.00 9 9 0 0 0
.................................................................TGTCTTTTTCTGCTTACTGGCGT..................................................................................................... 23 1 1 9.00 9 0 8 1 0
.................................................................GGTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 9.00 9 9 0 0 0
.................................................................AGTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 9.00 9 9 0 0 0
.................................................................TGTTTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 9.00 9 1 6 0 2
..................................................................GTCTTTTTCCGCTTACTG......................................................................................................... 18 0 1 9.00 9 9 0 0 0
....................................................................CTTTTTCCGCTTACTGGCGT..................................................................................................... 20 0 1 9.00 9 6 3 0 0
.................................................................TGGCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 9.00 9 7 0 2 0
.................................................................TATCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 9.00 9 0 6 3 0
................................................................TTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 0 1 9.00 9 9 0 0 0
.................................................................TGTCTTTTTACGCTTACTGGCG...................................................................................................... 22 1 1 8.00 8 1 4 0 3
.................................................................TGTCTTTTTCCGCTTACTAGC....................................................................................................... 21 1 1 8.00 8 7 0 1 0
.................................................................TGACTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 8.00 8 7 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCTT..................................................................................................... 23 1 1 8.00 8 5 0 2 1
.................................................................TGTCTTTTTCCGCTTACTGGCGTTA................................................................................................... 25 1 1 8.00 8 3 0 4 1
.................................................................TGTCTTTTTCCTCTTACTGG........................................................................................................ 20 1 1 8.00 8 8 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAAGGTGTA................................................................ 22 1 1 8.00 8 1 6 1 0
..................................................................GTCTTTTTCCGCTTACTGGA....................................................................................................... 20 1 1 8.00 8 8 0 0 0
.................................................................TGTCTTTTTCCGCTTATTGGCGT..................................................................................................... 23 1 1 8.00 8 0 8 0 0
.................................................................CGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 8.00 8 8 0 0 0
.................................................................TTTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 8.00 8 5 3 0 0
.................................................................TGTCTTTTTCCGCTTTCTGGC....................................................................................................... 21 1 1 8.00 8 8 0 0 0
.................................................................TGTCTTTTTCCGCTTTCTGG........................................................................................................ 20 1 1 8.00 8 7 1 0 0
.................................................................TGTCTTTTTTCGCTTACTGGCGT..................................................................................................... 23 1 1 8.00 8 1 7 0 0
................................................................CTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 7.00 7 7 0 0 0
.................................................................TGTCTTTTACCGCTTACTGGCG...................................................................................................... 22 1 1 7.00 7 3 3 0 1
.................................................................CGTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 7.00 7 7 0 0 0
.................................................................TGTCTTATTCCGCTTACTGGCG...................................................................................................... 22 1 1 7.00 7 5 2 0 0
.................................................................TGTCTTTTTCCGCTTACCGGCGT..................................................................................................... 23 1 1 7.00 7 1 4 1 1
.................................................................CGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 7.00 7 3 2 2 0
.................................................................TGTCTCTTTCCGCTTACTGG........................................................................................................ 20 1 1 7.00 7 6 0 0 1
................................................................ATGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 7.00 7 7 0 0 0
.................................................................TGTCTTTTTTCGCTTACTGGC....................................................................................................... 21 1 1 7.00 7 6 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAT................................................................................................... 25 1 1 7.00 7 1 0 5 1
.................................................................TGTCTTTTTCCGCTTACTCGC....................................................................................................... 21 1 1 7.00 7 7 0 0 0
.................................................................TGTCTTTTTCCGCTGACTGGCG...................................................................................................... 22 1 1 7.00 7 7 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGCCGT..................................................................................................... 23 1 1 6.00 6 2 3 0 1
.................................................................TGCCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 6.00 6 1 4 1 0
................................................................TTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 0 1 6.00 6 5 0 1 0
.................................................................TTTCTTTTTCCGCTTACTGGCGA..................................................................................................... 23 2 1 6.00 6 6 0 0 0
.................................................................TGTCTTTTTCCTCTTACTGGC....................................................................................................... 21 1 1 6.00 6 6 0 0 0
.................................................................TGTCTTTTTCCGCGTACTGGCG...................................................................................................... 22 1 1 6.00 6 3 3 0 0
.................................................................TGCCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 6.00 6 4 1 0 1
.................................................................TGTCTTTTTCCGCTTACTCG........................................................................................................ 20 1 1 6.00 6 5 0 1 0
................................................................CTGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 1 1 6.00 6 5 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGTT...................................................................................................... 22 2 1 6.00 6 6 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGTCGT..................................................................................................... 23 1 1 6.00 6 6 0 0 0
...................................................................TCTTTTTCCGCTTACTGGCGT..................................................................................................... 21 0 1 6.00 6 4 2 0 0
................................................................GTGTCTTTTTCCGCTTACTGG........................................................................................................ 21 1 1 5.00 5 5 0 0 0
.................................................................GGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 5.00 5 4 1 0 0
..................................................................GTCTTTTTCCGCTTACTGC........................................................................................................ 19 1 1 5.00 5 5 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGTCG...................................................................................................... 22 2 1 5.00 5 5 0 0 0
.................................................................TGTCTATTTCCGCTTACTGGCG...................................................................................................... 22 1 1 5.00 5 2 1 0 2
.................................................................TGTCTTTTTCCGCCTACTGG........................................................................................................ 20 1 1 5.00 5 5 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAAA................................................................................................... 25 3 1 5.00 5 2 0 1 2
.................................................................TGTCTTTTTCCGCTTACTGACGT..................................................................................................... 23 1 1 5.00 5 2 2 0 1
................................................................ATGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 5.00 5 5 0 0 0
.....................................................................TTTTTCCGCTTACTGGCGT..................................................................................................... 19 0 1 5.00 5 4 1 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................. 21 0 1 5.00 5 3 0 2 0
..................................................................GTCTTTTTCCGCTTACTGTCG...................................................................................................... 21 1 1 5.00 5 5 0 0 0
........................................................................................................CAGGAAAGGGAAAAAGGCGTA................................................................ 21 0 1 5.00 5 5 0 0 0
.................................................................TCTCTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 5.00 5 0 2 3 0
.................................................................TGTCTTTTTCCACTTACTGGC....................................................................................................... 21 1 1 5.00 5 2 0 1 2
.................................................................TGTCCTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 5.00 5 5 0 0 0
.................................................................TGTCTTTTTCCGCATACTGGCG...................................................................................................... 22 1 1 5.00 5 2 3 0 0
................................................................CTGTCTTTTTCCGCTTACTGGCGA..................................................................................................... 24 2 1 4.00 4 4 0 0 0
.................................................................TGTCTTTTTCCGCTCACTGG........................................................................................................ 20 1 1 4.00 4 4 0 0 0
.................................................................TGTGTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 4.00 4 3 0 1 0
.................................................................TGTCTTTTCCCGCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 0 3 1 0
.................................................................TCTCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 4.00 4 4 0 0 0
.................................................................TGTCTTTCTCCGCTTACTGGC....................................................................................................... 21 1 1 4.00 4 3 0 1 0
.................................................................TGTCTTTTTGCGCTTACTGGCG...................................................................................................... 22 1 1 4.00 4 1 1 0 2
.................................................................TGTATTTTTCCGCTTACTTG........................................................................................................ 20 2 1 4.00 4 4 0 0 0
.................................................................TGTCTTTTTTCGCTTACTGG........................................................................................................ 20 1 1 4.00 4 3 0 0 1
..................................................................GTCTTTTTCCGCTTACTGGT....................................................................................................... 20 1 1 4.00 4 4 0 0 0
.................................................................AGTCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 4.00 4 4 0 0 0
.................................................................TGTTTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 4.00 4 3 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTC.................................................................................................... 24 1 1 4.00 4 0 3 0 1
..................................................................GTCTTTTTCCGCTTACTGGCGTT.................................................................................................... 23 0 1 4.00 4 3 1 0 0
.................................................................TGTCCTTTTCCGCTTACTGGA....................................................................................................... 21 2 1 4.00 4 3 0 1 0
.................................................................TGTCTTTCTCCGCTTACTGGCGT..................................................................................................... 23 1 1 4.00 4 3 1 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCAT..................................................................................................... 23 1 1 4.00 4 2 1 1 0
.................................................................TGTCTTTTTCCGCTTACTGGCAA..................................................................................................... 23 2 1 4.00 4 2 0 0 2
..................................................................GTCTTTTTCCGTTTACTGGCG...................................................................................................... 21 1 1 3.00 3 3 0 0 0
..................................................................GGCTTTTTCCGCTTACTGGC....................................................................................................... 20 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTTCTGGCGT..................................................................................................... 23 1 1 3.00 3 1 2 0 0
.................................................................TGTCTTTTTCCGGTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCTCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 2 1 0 0
..................................................................GTCTTTTTCCGCCTACTGGCG...................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTG.................................................................................................... 24 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGTA...................................................................................................... 22 2 1 3.00 3 2 0 0 1
.................................................................TGTCTTTTTCCGCCTACTGGC....................................................................................................... 21 1 1 3.00 3 2 0 1 0
.....................................................................................................CGACAGGAAAGGGAAAAAGGCGTA................................................................ 24 0 1 3.00 3 1 1 1 0
.................................................................TGTCTTTTTCCGCATACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0
...................................................................TGTCTTTCCGCTTACTGGCGT..................................................................................................... 21 2 1 3.00 3 0 1 2 0
..................................................................GTCTTTTTCCGCTTACTAGCG...................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTATTTTTCCGCTTACTGGCGA..................................................................................................... 23 2 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCCCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 2 1 0
.................................................................TGTCTTTTTCCGCTTACTTGCGA..................................................................................................... 23 2 1 3.00 3 3 0 0 0
................................................................TTGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 0 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTGACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
................................................................GTGTCTTTTTCCGCTTACTGGC....................................................................................................... 22 1 1 3.00 3 3 0 0 0
......................................................................TTTTCCGCTTACTGGCGT..................................................................................................... 18 0 1 3.00 3 2 0 1 0
.................................................................TGTCTTTTTCCCCTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTCTCCGCTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCTGCTTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCCTACTGGCGA..................................................................................................... 23 2 1 3.00 3 0 1 1 1
.................................................................TGTCTTTTTCCGCCTACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 2 1 0
..................................................................GTCTTTTTCCGCTTACTGGCTT..................................................................................................... 22 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTCT................................................................................................... 25 1 1 3.00 3 1 1 1 0
.................................................................ACTCTTTTTCCGCTTACTGGCG...................................................................................................... 22 2 1 3.00 3 1 2 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAAA.................................................................................................. 26 3 1 3.00 3 0 1 1 1
.................................................................TGTCTTTTTCCGCTTACCGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTGTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 3.00 3 2 1 0 0
.................................................................TGTCTTTTACCGCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 1 2 0 0
..................................................................GTCTTTTTCCGCTTACTCGCG...................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACGGGCG...................................................................................................... 22 1 1 3.00 3 2 1 0 0
.................................................................TGTCTTCTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0
.................................................................TGTCTTTTTCCGCTTGCTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
.................................................................TGACTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
...................................................................TCTTTTTCCGCTTACTGGCGA..................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTGCTGGCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0
..................................................................GTCTTTTTCCGCTTTCTGGCG...................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCCCTTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTAACTGGCGT..................................................................................................... 23 1 1 3.00 3 0 3 0 0
.................................................................TGTCTTTTTCCGCTTACAGGCG...................................................................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................TTCTTTTTCCGCTTACTGGCG...................................................................................................... 21 1 1 3.00 3 1 2 0 0
.................................................................TGTTTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 3.00 3 3 0 0 0
.................................................................TGTGTTTTTCCGCTTACTGGCG...................................................................................................... 22 1 1 3.00 3 2 1 0 0
.................................................................TGTCTTTTTCCGCTCACTGGCGT..................................................................................................... 23 1 1 3.00 3 1 1 1 0
.................................................................TGTCTTTTTCCGCGTACTGGC....................................................................................................... 21 1 1 3.00 3 3 0 0 0
.................................................................TGTCTTTTTCCGCTTACAGGCGT..................................................................................................... 23 1 1 3.00 3 0 2 1 0
.................................................................TGTCTTTTTCCGCTTACTAGCGA..................................................................................................... 23 2 1 3.00 3 0 0 3 0
..................................................................GTCTTTTTCCGCTTACTGT........................................................................................................ 19 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTACAGCTTACTGGCG...................................................................................................... 22 2 1 2.00 2 2 0 0 0
.................................................................TATCTTTTTCCGCTTACTGG........................................................................................................ 20 1 1 2.00 2 2 0 0 0
.......................................................................................................ACAGGAAGGGGAAAAAGGC................................................................... 19 1 1 2.00 2 0 2 0 0
..................................................................GTCCTTTTCCGCTTACTGGC....................................................................................................... 20 1 1 2.00 2 2 0 0 0
.................................................................TATCTTTTTCCGCTTACTGGCGA..................................................................................................... 23 2 1 2.00 2 1 0 0 1
.................................................................TGTCTTTTTCCGCTTACTGTCGA..................................................................................................... 23 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTACCGCTTACTGG........................................................................................................ 20 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCGAAT................................................................................................... 25 2 1 2.00 2 0 0 1 1
.................................................................TGTCTTTTTCCGGTTACTGGCG...................................................................................................... 22 1 1 2.00 2 0 2 0 0
.................................................................TGTCTTTTTCCGGTTACTGGCGA..................................................................................................... 23 2 1 2.00 2 1 0 0 1
.................................................................TGTCTTTTTCCGCATACTGG........................................................................................................ 20 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGAT...................................................................................................... 22 2 1 2.00 2 2 0 0 0
..................................................................GTCTTTTTCCGCTTATTGGCG...................................................................................................... 21 1 1 2.00 2 2 0 0 0
..................................................................GTCTCTTTCCGCTTACTGGCG...................................................................................................... 21 1 1 2.00 2 2 0 0 0
................................................................ATGTCTTTTTCCGCTTACTGGCGT..................................................................................................... 24 1 1 2.00 2 2 0 0 0
.................................................................TGTATTTTTCCGCTTACTGTCG...................................................................................................... 22 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTTGA....................................................................................................... 21 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTT......................................................................................................... 19 1 1 2.00 2 2 0 0 0
.................................................................TGTACTTTTCCGCTTACTGGCG...................................................................................................... 22 2 2 2.00 4 4 0 0 0
.................................................................TGTCTTTTTCTGCTTACTGG........................................................................................................ 20 1 1 2.00 2 1 0 0 1
.................................................................TGTCTTTTTCCGCTTACTGGAAA..................................................................................................... 23 3 1 2.00 2 1 0 1 0
.......................................................................................................ACAGGAGAGGGAAAAAGGCGTA................................................................ 22 1 1 2.00 2 0 1 1 0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAC............................................................... 23 1 1 2.00 2 0 0 2 0
.................................................................TGTATTTTTCCGCTTACTTGC....................................................................................................... 21 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTATCCGCTTACTGGCG...................................................................................................... 22 1 1 2.00 2 0 1 0 1
......................................................................................................GACAGGAAAGGGAAAAAGG.................................................................... 19 0 1 2.00 2 0 2 0 0
.................................................................CGTCTTTTTCCGCTTACTGGCGA..................................................................................................... 23 2 1 2.00 2 2 0 0 0
.................................................................TGTCTATTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 0 1 1 0
.................................................................TGTCTTTTTCGGCTTACTGGCG...................................................................................................... 22 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTAGTGG........................................................................................................ 20 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGGCT...................................................................................................... 22 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCAGCTTACTGTC....................................................................................................... 21 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTCACTGCCG...................................................................................................... 22 2 1 2.00 2 0 2 0 0
.................................................................TGTCTTTTTCCGATTACTGG........................................................................................................ 20 1 1 2.00 2 1 0 1 0
.................................................................TGTATTTTTCAGCTTACTGGCG...................................................................................................... 22 2 1 2.00 2 2 0 0 0
.................................................................TGACTTTTTCCGCTTACTGGCGT..................................................................................................... 23 1 1 2.00 2 1 1 0 0
......................................................................................................GACAGGAAAGGGAAAAAGGC................................................................... 20 0 1 2.00 2 1 0 1 0
.................................................................TGTCTTTTTCCGATTACTGGCG...................................................................................................... 22 1 1 2.00 2 0 1 0 1
.................................................................TGTATTTTTCCGCTTACTGGT....................................................................................................... 21 2 1 2.00 2 1 0 0 1
.................................................................TCTCTCTTTCCGCTTACTGGCG...................................................................................................... 22 2 1 2.00 2 0 2 0 0
.................................................................TGTCTTTTTCCGCTTAGTGGCG...................................................................................................... 22 1 1 2.00 2 1 1 0 0
.................................................................TGTCTTCTTCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 2 0 0 0
..............................................................CAGTGTCTTTTTCCGCTTACTGGCG...................................................................................................... 25 3 1 2.00 2 2 0 0 0
.......................................................................................................ACAGGAAAGGGAAAAATGCGTA................................................................ 22 1 1 2.00 2 1 1 0 0
.................................................................TATCTTTTTCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 2 0 0 0
.................................................................TGTACTTTTCCGCTTACTGGCGT..................................................................................................... 23 2 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTCCCGCTTACTGGC....................................................................................................... 21 1 1 2.00 2 2 0 0 0
........................................................................................................CAGGAAAGGGAAAAAGGC................................................................... 18 0 1 2.00 2 1 1 0 0
..................................................................GTCTTTTTACGCTTACTGGC....................................................................................................... 20 1 1 2.00 2 2 0 0 0
.................................................................TGTCTTTTTCCGCTTACTGGCCA..................................................................................................... 23 2 1 2.00 2 0 0 1 1
...................................................................TCTCTTTCCGCTTACTGGCG...................................................................................................... 20 1 1 2.00 2 1 1 0 0

Anti-sense strand reads

AGAGTAGTTCCGCGGTACACACGCCTAGCCATACACTTTTCACCTATGTGTTTAAGATCAGCTAAACAGAAAAAGGCGAATGACCGCAAAGTAAAGGTGTTGCTGTCCTTTCCCTTTTTCCGCATAAATGATACTCAAACGGGTCGCTGAACGTCCACTAGGTCCACACATATCATAATCTTTCATAAA

*************************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V115

head
..........................................................................GGCAAATGACCCCGAAGTAAAG............................................................................................. 22 3 3 0.33 1 1 0 0
..............................................................................................................TCCCTAGTTCCGCATGAATG........................................................... 20 3 4 0.25 1 0 1 0
..........................................................................GGCGAATGACCCCGAAGT................................................................................................. 18 2 4 0.25 1 1 0 0
.............................................................................................................................................GGTCGCTGAACGTGCAGT.............................. 18 2 6 0.17 1 1 0 0
..............................................................................................................TCCCTATTTACGCATGAATG........................................................... 20 3 9 0.11 1 1 0 0
..........................................................................GGCAAATGACCCCGAAGTAA............................................................................................... 20 3 9 0.11 1 1 0 0
...........GCGGTAAGCACGCCCAGCC............................................................................................................................................................... 19 3 12 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_11:1581832-1582020 - dse-mir-316 Known_mirbase TCTC-----ATCAAGGCGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTG-----CAGGTGATCCAGGTGT--------GT----------------ATAGTAT-----------------------TAGAAAGTATTT-----------
droSim2 3l:21179426-21179614 - dsi-mir-316 Known_mirbase TCTC-----ATCACGGCGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTG-----CAGGTGATCCAGGTGT--------GT----------------ATAGTAT-----------------------TAGTAAGTATTC-----------
dm3 chr3L:21661764-21661952 - dme-mir-316 Known_mirbase TCTC-----ATCACGGCTCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTG-----CAGGTGATCCAGGTGT--------AT----------------ATAGTAT-----------------------TAGTAAGTATTT-----------
droEre2 scaffold_4784:21318761-21318968 - der-mir-316 Known_mirbase TCTC-----ATCGCGGTGCCATGTGTGCGG-ATC-GGTATGTG------------------------------------------------------------AAATA--CA--------------C--------------------AAAG------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTG-----CAGGTGATCAAGGTGT--------AT----------------GTAGTAT----A-CCCTCTT------GTTTGGGTATGTATTT-----------
droYak3 3L:18849460-18849651 + dya-mir-316-1 Known_mirbase TCTC-----ATCACGGTGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTG-----CAGGTGATCAAGGTGC--------------------------ATAGTATGGGTAG-------------T-AGT----GGTATAC-----------
droEug1 scf7180000409472:489543-489742 - CCTC-----ATCGCGGTGCCATGTGTTCGG-ATC-GGTATGTGTCGATCA---GGC----------------------------------------------T-------ATATCAGTGTAC-----------------------------------------------TATATATCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCG-----CAGTTGGTCATTCTAA------------------------------------------------------ACACCTAAATATCT-----------
droBia1 scf7180000302377:1644719-1644922 + TCTC-----ACCACGGTGCCATGTGTTCGG-ATC-GGGATTCGTCGAGCA---GGC----------------------------------------------C-------AGA-------AG-----------------------------------------------TGTATACGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTG-----CAGGTGACTC-----------------------TCGATCGGTGCAA----------------------GTGCAGGAAAGTATGTTC---------
droTak1 scf7180000411025:47389-47594 + TCTC-----ATCGCGATGCCATGTGTTCAG-ATC-GGTATTTGC-----------C----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTACACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTC-----CAGGTGATCAGGCTAT--------ATAAGCCC---------------------------CGTGTGTAAATGCTGGTAAGTATGTTC---------
droEle1 scf7180000491199:1233779-1233980 + TCTC-----ATCACGGTGCCATGTGTTCGG-ATC-GCTATGTGTCCGACG---GAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTATACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTG-----CACCCAATCAAGCTAT--------------------------TGAC----------------------ATCCATGTAAGTATGTTTC--------
droRho1 scf7180000780271:104990-105187 + TCTC-----ATCACGGTGCCATGTGTTCGG-ATC-GGTATGTGTCGAATA---AAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTATATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-G-----CAAGTAATAAAGCTAT--------CT----------------GCA------------------------TTCCTGTAAGTATGT-----------
droFic1 scf7180000453831:501987-502198 - TCTC-----ATCGCGGCAACATGTGTTCGG-ATC-TGTATGTGTCGGATA---GAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TTAATGCAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCACCTTCAACGGAGCAATGTGT--------CC----ACTC---CT---CTTC----------------------GTTAAGGTGAGTATGC-----------
droKik1 scf7180000302272:829362-829594 + TCTCATCTCATCACGGTGCCATGTGTGCCG-ATG-GCTATATCTCGCGCATCGGGTATAG---------------AGTATA-----------------TAGT---ATATATAC--AGTGTAA-----------------------------------------------CGTCTATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAG--------------------CTAT--------CTGTATTCTGTGATATATGAAT----------------------GTACAGGTGAGTATAT-----------
droAna3 scaffold_13337:3985719-3985918 - dan-mir-316 Known_mirbase TCTC-----ATCG-GGTGCCATGTGTTCGGGGCCAAGTC-------------------TA-----------------AGTATAAAACGATAGTGCTTTTCTTC-------AAG-------AA-----------------------------------------------CATATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCG------------TCAAAGTCTAAA-----------------------------T-----------------------TA--AAAAATGT-----------
droBip1 scf7180000395450:119433-119636 - TCTC-----ATCGGGGTGCCATGTGTTCGG-GCCAAGTC-------------------TAGTGCTTTT------------------------------TTTTCAAAGA------------TA-----------------------------------------------TACATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCG-----AC-------AACGTCTAATTTAGAAC-------------A--TGTC----------------------A-TCATGAAAGT----CTT--------
dp5 XR_group6:4548501-4548716 + dps-mir-316 Known_mirbase CCGC-----CTCGTGGTGCCATGTGTTCAA-AAA-AGTC-------------------CGAGGTTTTCGCAGCTAAATATA-----------------TTGTAAAATA--TA--------------C--------------------AA-----------------------AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA--------CAACCGACCCAATTCA--------GC----------------TTAATAA----------------------TAGGTGAGTACATCCC--------
droPer2 scaffold_9:2845539-2845754 + dpe-mir-316 Known_mirbase CCGC-----CTCGTGGTGCCATGTGTTCAA-AAA-AGTC-------------------CGAGGTTTTCGCAGCTAAATATA-----------------TTGTAAAATA--TA--------------C--------------------AA-----------------------AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA--------CAACCGACCCAATTCA--------GC----------------TTAATAA----------------------TAGGTGAGTACATCCC--------
droWil2 scf2_1100000004511:1092681-1092850 + dwi-mir-316 Known_mirbase -------------------------------ATA-GATATATA-------------------------------------------------------------------TAT-------AA-----------------------------------------------TGTATGTAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTC--------TCCAC-AAAATCT--------------------------CTAC----------------------AACTAAGTAAGTATAAACCTATATAGT
droVir3 scaffold_13049:24266782-24266933 + dvi-mir-316 Known_mirbase TCTT-----GTCAGGGT-CTATATG--------------------------------------------------------------------------------------AA-------AGTATACTTAACTTGATTGT----AT-ATCT------------------TTGATCTATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAAC----------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:18891144-18891305 + dmo-mir-316 Known_mirbase CTAT-----A-----------------------------------------------------------------------------------------------------GA-------AATATACAT-ACTTAATTGTCAAAATAATATTTGATCTAACTGAATCGATTTTTATATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGA--------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:9482004-9482196 - dgr-mir-316 Known_mirbase TTTT-----ACCAGAG--------------------------------------AC--TAAACATTTTGTG--TATAAGTA-----------------TTGTATG-----ATT-------AA-----------------------------------------------GCAATCTTCAGAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAAC----------CT-ATTCAAATAT--------CT----------------ATAAAGCTAGAAC-------------A-ACTGGTGAGT---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TCTC-----ATCAAGGCGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTG-----CAGGTGATCCAGGTGT--------GT----------------ATAGTAT-----------------------TAGAAAGTATTT-----------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22126782.00267821479788999111185
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2315570.00557019628472586175
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2015359.00535950089834219
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2114633.00463343188877150
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2111195.0011951188061
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2311037.00103771613230159
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221348.00348511671291
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191319.00319318001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241284.00284876711416
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201278.00278278000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................211219.0021918010029
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221139.0013910022215
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221121.00121918715
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................231114.00114114000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221109.00109106021
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................19199.0099851112
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21192.0092685019
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................24166.00662223120
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20162.006258040
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................19153.005348140
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................22149.004949000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24148.00481715412
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................23145.004558320
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21144.004463260
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................23142.0042123234
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18139.003931071
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................25132.003213874
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18123.002323000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20121.002116401
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................20120.002019001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21119.001919000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................25119.00197516
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18118.001818000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................21118.001818000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19118.001818000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................22118.001818000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22117.001711060
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19117.001714120
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................23117.001751110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................20115.001513002
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................21114.001411120
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................21114.001414000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................23112.00126600
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23112.001212000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20111.00114502
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................22110.00107102
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................1819.0099000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................1819.0099000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2019.0096030
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2219.0099000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................2518.0083401
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2018.0088000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2116.0065100
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................2216.0066000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2116.0064020
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGC.......................................................................................................................................................................1915.0055000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAA..................................................................................................................................................................2515.0052102
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1915.0054010
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................2115.0053200
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2115.0055000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2014.0044000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................2414.0040031
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2314.0043010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCAA....................................................................................................................................................................2314.0042002
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG...................................................................................................................................................................2413.0033000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTA.....................................................................................................................................................................2213.0032001
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2413.0031110
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2413.0033000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1813.0032100
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA.................................................................................................................................................................2613.0030111
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2113.0033000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGT.......................................................................................................................................................................1912.0022000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAT.....................................................................................................................................................................2212.0022000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTT........................................................................................................................................................................1912.0022000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAAA....................................................................................................................................................................2312.0021100
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2312.0020200
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1912.0020020
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................2012.0021100
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGC..................................................................................................................................1812.0021010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCCA....................................................................................................................................................................2312.0020101
droSim2
TCTC-----ATCACGGCGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTG-----CAGGTGATCCAGGTGT--------GT----------------ATAGTAT-----------------------TAGTAAGTATTC-----------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22110671.00106714677171481364916162392111111781133244328000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................1919867.009867665426191542927812314005000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2219056.0090560110640111616415887228219097297000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2117082.007082208712713469984223131076142303298240000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2013750.0037502862761491292301310965112614224328000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................2111517.0015170001530231224001741266000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2311068.00106846163385535242141262299111000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................231564.005642108900181229321411023000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................231375.00375010110214022340300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................181331.0033146032446800015000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................231309.00309001600122110149236000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................211267.002670012630000002100000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................231255.0025500020101103023224000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221236.002361137312160074001811000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................211113.00113148019004526000001000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221111.0011158217004222414303000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................22191.0091000100000000585000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20190.00900141610100101461000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................24182.008200112001694892300000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................20180.0080000791000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................22175.00750002000000501058000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................19152.0052000510010000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23148.0048001470000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19133.00330000132000018000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................24129.0029000600611131100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21129.0029650110024000100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................20128.0028167030011000000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................19128.0028003900000012400000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20128.0028130220000000200000
........................................................................................................................................................................................................TTTCCGCTTACTGGCG.....................................................................................................................................................................16127.0027000000000027000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18127.0027001800000018000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCTG....................................................................................................................................................................23126.0026169100000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24123.002300020098130000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................18122.0022000013200007000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................22122.0022000210000001000000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................24121.0021000000100000515000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................21120.0020000100000020215000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21114.001400040000000019000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21113.001333040021000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22113.001353100000002200000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20112.001264020000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................24110.001000000000001036000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................1919.00910080000000000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCG.....................................................................................................................................................................1719.00900000000009000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................2319.00902120000102100000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2219.00900090000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................1818.00841030000000000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1917.00700010000005100000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTG........................................................................................................................................................................2017.00743000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTA...........................................................................................................................................................................1617.00700000000007000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2317.00700000010000123000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2016.00600000000006000000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT................................................................................................................................2316.00600000000000015000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTA........................................................................................................................................................................1916.00642000000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2116.00601020003000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2415.00500000000000014000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2215.00500050000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAA.............................................................................................................................2415.00500010000001021000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................2515.00500010000010102000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2315.00500000000100004000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG...............................................................................................................................2214.00400000000000004000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2214.00400310000000000000
.........................................................................................................................................................................................................TTCCGCTTACTGGCGT....................................................................................................................................................................1614.00400000000004000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAG....................................................................................................................................1714.00400000000004000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGA................................................................................................................................2114.00400000000000013000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG..............................................................................................................................2314.00400000000000013000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2314.00400130000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................2214.00410010000000002000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2114.00400040000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAG....................................................................................................................................1814.00400002100001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTC........................................................................................................................................................................1914.00421000000000100000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC...............................................................................................................................2213.00300000000010011000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATA.............................................................................................................................2413.00300000000000021000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCTGG...................................................................................................................................................................2413.00311000000000100000
.........................................................................................................................................................................................................TTCCGCTTACTGGCG.....................................................................................................................................................................1513.00300000000003000000
........................................................................................................................................................................................................TTTCCGCTTACTGGCGT....................................................................................................................................................................1713.00300000000003000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCA.................................................................................................................................2013.00300000000000003000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2113.00300030000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTAC..........................................................................................................................................................................1713.00300000020001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAA..................................................................................................................................................................2513.00300020000000001000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1813.00300000000003000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAA.....................................................................................................................................1613.00300000000003000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2013.00320010000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAAA....................................................................................................................................................................2312.00200000000000002000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACC.........................................................................................................................................................................1812.00201000000001000000
...........................................................................................................................................................................................................................................GGAAAGGGAAAAAGGCGTA...............................................................................................................................1912.00200000000002000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTT........................................................................................................................................................................1912.00211000000000000000
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGT................................................................................................................................1912.00200000000001001000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGCCA..................................................................................................................................................................2512.00200000000002000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2412.00200010000001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTC.................................................................................................................................................................2612.00200001100000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATT.............................................................................................................................2412.00200000000000002000
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGTA...............................................................................................................................2012.00200000000000002000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG...................................................................................................................................................................2412.00201010000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAA......................................................................................................................................1512.00200000000002000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................1812.00200020000000000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................1812.00200010000001000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGA....................................................................................................................................................................1912.00200010000001000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1912.00200001000001000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2312.00200010000000100000
dm3
TCTC-----ATCACGGCTCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTG-----CAGGTGATCCAGGTGT--------AT----------------ATAGTAT-----------------------TAGTAAGTATTT-----------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................221269142.002691420010934107631731305001130264161170290401034264386051104061251670763669383103543682225090471360348880164031055662650001408034000000000000000000000451631291801007644181122253212248613823812110268457123205712281271889267317524327388354114913350664544931337500005274771133191195946636774226513294024539758147500000040040849949059453741708284866408860872200200021922309118610103381540131521398103000002812140030217001455419602251335007210103646058148763520973878381067700010100123014081966300830123004353319260040020600000300108300016627280119451492388135241538988600000319454398493112587863544543853077615740457875305368202584810271728100000100003821527883291001621712101007
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................23185039.008503900000300260010100010413287981100016897000592259312112173145605403801051907029629056614958000755622000000000000000000000304293600055207251447126405282660000331941344126036120306933069444520000434011034922021225424422421179238110726513300000000000115114083109611027316326111001003116803415082891332457726916600000138872542034000113444551126198118172110308770278471715177423100001000010737851112240002208200131003002700000202002000035317032411151557349536621260010012225320520125975949359052346776167451173469316478560260810772280000000400015371366023261014577686000009
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................21150168.0050168000021000511103014202229115600033695119230449698835822293062138832371858126147197000113892000000000000000000000063011000742620245711216400334182150060191715101401415421316401166920961051498109004611334610200061254422491284172213250000000000020533202005469138610631417137210000022129152717000220142300001430000000002771188160161462367763288524736995786279738370001000018120603610017983062706000003800000000001000040147821181321610400000644610091046301707487149242531018200126486800000000000613111240635065000005
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................20124999.002499900001100000020100100267232000000000021017301923198410117973743504200011173260000000000000000000001000000060138105265000494870010176011192113241111287200371371660013001100000001341566305645200000000000149268010401481161084616761799000002271913186000804900010000000000006021954752020381310632280224351411265157700000000460172001791820140000004000000000000000281309351110115105000006248118171071350573651122010001133320000000000048956224294452001000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................22119133.001913300001100390020200000147430000100000010231461311123113120641461114221100000000000000000000000000033019057000374106331231207149802830010255120280310400004000202000007100000027126515854704313329232400000000000181802010421813112035226000014417144507003563077602000739018126260002261078309701929990122534839221236112862900005200303506000002740100000010000000000000001810932125302091410100000232127019436190718133742302701923001293034950000006001091104986118561371000011
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2314934.004934000000000000100000002319000000000003917159030105649621593946310000000000000000000000000000000000000050022140002010000000000000222020524016319250000002020000001871161523163450000000000040560300028200370330510000001153122102000331111000004600000000022111326717130515235894193982470000680042082600003819032000004000000000000000301983021332218281620000042485567010107015521226221901012001210340000000000012112013281725000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2414337.0043370000000000000000010015240000000000004105643155132698411315610600015820000000000000000000000002100000100011301000000000000010001401020502021000000000000300251814201451410936140000000000026040023030500080000214411281600021126200000470000000004931746616566941963645798200000000383506300009002000001000000000000000136564726172158400000891881943556450284981293431040380074741430000002000025926255245240000014
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................2112977.0029770000000000000000000032010000000000067153207212593102400000000000000000000000000000001500031301015310232000000000000001000000000000000000000000000113119189526630000000000011011001010112400000245251100070513010008210111300008514650118174208164583207280156141000000000200000003001000000000000000000000017282123200000100030110158712200000182029010000000007132017720000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2311441.00144100000000200000000000001000001000000001212021324011210000000000000000000000000000210892900050700053200020000070010831500000000001010000000000000000385424111400000000000000302000121110000000007313200021352000007500000000030142274434436615625515822000000005700000002001000000000000000000000050715050000002109828410037826100100343458000000200001078817000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2211227.0012270000000000000000000021230000000000081715203331372166900417310000000000000000000000000000000000001000000270011010000000000021720000030151613000000100000000653142250101000000000004105000103030000000037282000603000000420000010004164114358116735312542000000001120131000038909000001000000000000000626912132128000002167028850961100604200254000000000004362003000001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2211055.001055000022000401000000000101100000000000315351711252002140200000000000000000000000000000000000001100111001103000000000302041000311020720000000000000001001262010000000000000660100630106010000000298131000200200000000000000004283188410121725010536680000410002020000010140170000000000000010000006232105374170000033020510027603101100133000000000001020002000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................241813.008130000000000000000000000000000000000002201056132302390100000000000000000000000000000000000000000001000001000000000000111000110000110000000000000002323655402400000000000130200020006030000003104610003050000001100000150007197151217293414814190000010040024000043020000000000000000000003272153367140000011111213143905133071411018170081130000000000003766131715000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................231767.0076700000000000000000000100100000000000003330021901810163100200000000000000000000000000000000000200000001000000000000000000010100010002011000000000010000134216100000000000000032010011000110000000243220001030000001100010000052049711944245150000000054022000032020000000000000000000002310174825410000033341987906222373604200357000000000003011104000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................231572.0057200000000001000000000001000000000000001000010102001000000000000000000000000000000000020002030000410322170000000000002000000100000000000000000000002414151000000000000003100001200020300000013132000006100000250000000006237173240287933513514000071000000000000100000000000000000000000001302030300000010020200011210001000468000000000000124564000007
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................251567.00567000000000000000000000133000000000000000121370315105610000541000000000000000000000100000000000000000000000000000000000100000000000000000000000000035524860260000000000000100001000010100000008370000601000000210000000005767715131413961714000000002201000002000000000000000000000000060341105000000010035402534110430048310000000000001021502000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191549.005490000000000000000000000080000013701011132026011001001010004320000000000000000000000000000000100003620113100000000000202000000005022008800002000000101213200000000000000041102003714020120000076300000300000000000000000002101211141517181823850000000000035000011180500000100000000000000043105310015000008510180201061100301000221000000000004641143000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................211503.00503000000000000000000000000000000770102200100424020035000000000000000000000000000000000000000000000000000000000000000002100001207179000000002000000015206500210000000000016806009908031800000023100000010100000000000000000974420251054293136000000001100000003003000000000000000000000316031143500000000003000001001000000106000000000000020100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................211435.00435000000000000000000000016000000000000111102801001002000000000000000000000000000000000000000000002210000010000000000000120001310302600000000000000021100900000000000000034030004000202000000002100001000000000000000000023112556112234609220000000000012000091207000001000000000000000240404010000021140001081500100100031000000000005912101000000
........................................................................................................................................................................................................TTTCCGCTTACTGGCGT....................................................................................................................................................................171389.0038900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093712521700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................241383.003830000000000000000000010000000000000020010014021001010000000000000000000000000000000000000000000000000000000000000000020000021020220000000000000002000113002000000000000270200020108040000004330000000200000002000000000051452098810990000000000026000036040000010000000000000006152181132100000017821240010044815101000113000000000003463403000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................211373.0037300000000000000000000000400000000000000020111040000540000000000000000000000000000000000000000100000000000000000000004032030204010020000000000000000010090000000000000002803005001030100000007000000000000000000000000000022120415103251815000013100000110000422010000010000000000000000101000100000606401000301000000000100000000000031100010000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................231340.00340000000000000000000000110000000000000000000003100010000000000000000000000000000000000000000100001010100000000010000000000000000000000000000000000010013001000000000000220000000000000000000001000020500000050000000000210252624237429322719000032000000000001001000000000000000000000030002000000000000001000112100000034000000000000000133000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................201330.0033000000000000000000000200000000000004100002010311000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301230000000000000000101000000000040000021041300000000000100030000001311829141810372139570000000000000000001000000000000000000000002301024010000000101010000201001000125000000000005113302000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGATC....................................................................................................................................................................231311.00311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025556000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................221291.00291000000000000000000000000000000000000000312001000001020000000000000000000000000000000000000000010000000100000000000001000000003001000000000010000120014320000000000000017020010000000000100300100000000000000000000000029061214815365140000000002010000051020000000000000000000002191502301100000101115020316530100000000000000000000000120000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................191256.002560000000000000000000000040000000000000000110010001000100000000000000000000000000000000000000000000100000000000000000021000000000010000000000000002323266000000000000000010200020100000000001200000000000000000000000000338152200010100000000000200000001000000001000000000000000312286135100000010010200000500000000102000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................221231.002310000000000000000000000100000000000001100100021000001100000000000000000000000000000020000001000000000100000000000000000000000000000000000000000000000182000000000000000101000000000300000012041000101000000011000040000121461291094081246000000000000000000000000000000000000000000030000000000000001010000112000000564000000000003212012000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................251212.00212000000000000000000000010000000000000000100000300000000000000000000000000000000000000000000000000200000000000000000003000000003024000000000000000000108000000000000000330300120400050000001031100001000000000200000000003210146113200000000000130000140200000200000000000000025131536000001249130210005711110000031000000000003312237000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................181183.001830000000000000000000000000000000000000000001010001010000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000001001215000000000000000010000000000001000000000000000100000000000000000462150014000000000000000000000000100000000000000000000000030001000000001054008000030150003400000000000225165111311000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATC.............................................................................................................................241161.0016100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................181158.00158000000000000000000001604000000000001000010101002101000000000000000000000000000000000000000000000000000000000000000000200000000010000000000000000010114800000000000000000000002010000000000022000004000000000000000000021522022010644000000001200000001000000000000000000000000010103010000010000000010000000200002000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221149.001490000000000000000000001000000000000001001201020201010000000000000000000000000000000000000000000000000000000000000100000000102010000000000000000000102019000000000000000120200010000030000004500000000020000000000000000021292712655000000001100000000000000000000000000000000270021040000000000612001502201200024000000000000010100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................181142.00142000000000000000000000001000032000100000100001000000000004100000000000000000000000000000000000000210000000000000000000100000001800008160000000000000001300000000000000000022010203200300000410000000000000000000000000034143116300110000000001000000001000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................231138.0013800000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000011000102000000120100000000000000000000000024951211701230000000000000000010000000000000000000000003313210290000015200714043305201300110000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................201126.0012600000000000000000000000000000000000000100000600101100000000000000000000000000000000000001010000010000000000000000000320000000503870000000000000000010110000000000000000010100000100000000002000000000000000000000000000000054150302000000000000000003402000000000000000000000000103000000001000000010000000000000000000000002110011000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................181116.001160000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100090000000000000000000000000000200000000010000100200000000000000001037212100100000000000000000000000000000000000000000000000010011000000000000200000000100000010000000000000000000000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCG.....................................................................................................................................................................171113.00113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624384301010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201112.001120000000000000000000000010000100000010000000100000000000000000000000000000000000000000000000000000000000000000000000012000021020020000000000000000000020000000000000005201000301120100000000000000000000000000000000000000141650516119000010000000000000101000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................221108.0010800000000010000000000000000000000000000000000101001000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000100100000000000000000000000000000000000020200000046000000000000000061321467135337000000000000000000000000000000000000000000000101000000000001000001200000000602000000000000001001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTCA................................................................................................................................................................271108.0010800000000000000000000002900000000000000010001010000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000200220000010000000000000000000000000000000000000000000000000000000001000000304000000005300000000000000001100000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................211108.00108000000000000000000000000000000000010100000001020012000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000005000000000000000000000000000000000000000110000500000002000000000461856395641000000000000000000000000000000000000000000001210020000000001100010000000000724000000000000001103000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................25197.0097000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000002106020100000000000110000010200000000000301000000000000000000000000192123031111000000000001000000100000000000000000000000142421020000024110100011225100200023000000000001001000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTC.................................................................................................................................................................26191.009100000000000000000000002400000000000001010000000100000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000541332110000000000000000000000000000000000000000000100000100000001000000000000000003500000000000000010100000000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................24182.00820000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001100020000000000000000001000000000000000001010000000000000010000000000730395136542000000000000000000000000000000000000000000010000000000000006000010102000000021000000000000001000000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................20181.0081000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000100201200000000000000000000000010000000000001000002000000000000000000001166010000000000000020000000000000000000000000000000000100000100000000104000000100001000150000000000000001000000014
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19171.00710000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000001250000000000000000000000000000010000001100100000002000002000000006621011110001000000004200000000000000000000000000000000010003000000000000100000000000000010020000000002012210100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................24169.0069000000000000000000000000000000000000200000200000112000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020006000000000000000000000000000000000000010000000000000000000000000372020220022000020002000000000000000000000000000000000000102010000010000700001312000200101000000000003000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................23157.0057000000000000000000000000000000000000000000011100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100030000000000000000000000000000000000000000000200000001000000000172201232011000032000000000000000000000000000000000000011200000000000001020000110000000003000000000001000014000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................19156.0056000000000000000000000010000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000430500000000000000000000000000000000000000000000000000000203200000000010000000200000100101000000000006041365000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................19155.00550000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000110021000000000000000000000001000000000000001000000000000000000000000033510110001000000003000000000000000000000000000000000000200020000000000101000000000000030000000000000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20154.0054000000000000000000000000000000000000000000001010002000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000008100000000000000000000010100000000000100000020000000000000000000410000140200000000005100000001000000000000000000000000120211000000031000200000000000100000000000000000110000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................19145.0045000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000110200010002000000003000000000000000000000000000001137104921000000000000000000001000000000000000000000020000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAC...................................................................................................................................................................24142.0042000000000000000000000000000000000000000001300001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000001000000000000000000000000000000000000010004130114000062000000100001000000000000000000000000020000010000000100000010100000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................24142.0042000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000011104052630000000000000000000000000000000000000000000000002000000000001000000122000000101000000000000020001000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAA..................................................................................................................................................................25138.0038000000000000000000000000000000000000100001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000002000000000000000000000100102000000000000000000000000000000000000020000010000000000000001000001202000000000000000000000011000010000000540000000100000000002000000000000110000000000
........................................................................................................................................................................................................TTTCCGCTTACTGGCGTT...................................................................................................................................................................18137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051181300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................24135.0035000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000300000000000000000000000000000000010000000000000000000000000000000000000001000000300000000000000000010021060306000000000000000000000000000000000000000000000100000000000000000000001000000010000000000000000102000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21131.0031000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000131832113000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................20131.0031000000000000000000000001000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000010100000000000000000000000000000000000000000020100100002010000006000000000000000000000000000000003001201000000000001000000000000000000000000000000020100010000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18131.00310000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000110000000000000000110000010100000000000000000000000000000000000000022200100000000000000000000000000000000000000000000000010000000000011000001000000000000001000000000000000100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA.................................................................................................................................................................26128.0028000000000000000000000000000000000000000000201000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000010000000000000000000010001311000000000000001000000300000000000000000000000020001000000022000000000000000000001000000000000001000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................20128.0028000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000002000000000000000010000000001000000001000000000000000000000000000000012471312000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG..............................................................................................................................23128.0028000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010130253125000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGG...................................................................................................................................20127.0027000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200008032000000000000000000000000000000000000000000000000000000000000000400110100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000002100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21126.0026000000000000000000000001000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000001000000000000000000000000000100100010000020000000000000000000000000000000000000003320001000000000000000000101000000000000000000000010000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAG..................................................................................................................................................................25125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000011134000031000000000000000000000000000000000000000000100212010000001000000000000001000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTAA.................................................................................................................................................................26125.0025000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000210001010000001000000000000000000000000000000010000000000000000000000000000000000000000000000000030102000000000200010000200000000000000000000000010002000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................21124.0024000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000001000000000000000000000000000020001130021000000000000000000000000000000000000000000200001000000000000010000000200000000000000000000000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................21124.0024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100010000000000000000000000000000000000000000000022243110000000000000000000000000000000000000000000110001010000000000000000001000000001000000000000000000000000
droEre2
TCTC-----ATCGCGGTGCCATGTGTGCGG-ATC-GGTATGTG------------------------------------------------------------AAATA--CA--------------C--------------------AAAG------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTG-----CAGGTGATCAAGGTGT--------AT----------------GTAGTAT----A-CCCTCTT------GTTTGGGTATGTATTT-----------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22159102.005910251898115288814561017263952
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2019316.0093168767186214782591
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2116963.00696363683492359431210
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2315179.0051793393267144230837205103
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2114052.0040524048101020
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191546.00546545100000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221521.00521721290122771021
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201473.00473473000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................231437.00437435101000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................231310.003101841121102874
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221207.00207142015299120
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221206.00206204100100
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................201192.00192188310000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241182.001829914774195
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191160.001601452012100
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221147.00147136200180
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................191127.00127122401000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................23180.0080205202330
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18175.007565401140
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21169.006960110340
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21165.006557010340
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23155.005555000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................21154.005454000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................22154.005454000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21152.005245700000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21146.0046614002600
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22144.0044201516110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24144.0044230001650
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................21144.004444000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18135.003533000020
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................18134.003420002930
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20129.002926000030
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................23125.0025013011100
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20124.002461001700
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18124.002424000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19122.002222000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................20120.002016310000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG...................................................................................................................................................................24117.001717000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................25117.001711000600
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................22115.001520000013
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................25115.00159000330
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19115.001521001020
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................18114.001414000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGT..................................................................................................................................19113.001310001200
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................24113.00136000331
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................24112.00124100205
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................22112.001212000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................21112.001212000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................23112.00124000800
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18111.00118201000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................20111.00118210000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2119.0099000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1918.0085300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................2018.0088000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................2216.0060400200
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2015.0055000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2115.0054000100
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGCG......................................................................................................................................................................2015.0055000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2015.0055000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1815.0053100100
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2115.0055000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2314.0044000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2214.0044000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGT.......................................................................................................................................................................1914.0044000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2313.0030000300
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................2313.0031000200
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1913.0030000300
droYak3
TCTC-----ATCACGGTGCCATGTGTGCGG-ATC-GGTATGTG-------------------------------------------------------------------AAA-------AG-----------------------------------------------TGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTG-----CAGGTGATCAAGGTGC--------------------------ATAGTATGGGTAG-------------T-AGT----GGTATAC-----------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22218340.503668120527247565624123875252480010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2023690.50738150604612225617350000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2123387.50677543345051687106915200000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2322060.504121018861589288476222400025
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2221247.502495032620822407540020
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2121220.502441024251600000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................192726.5014531185255413410000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................192227.004540451300000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................232193.0038601137220010000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................202181.003620362000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................232130.0026002023260010010
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................212106.5021306214400070000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................192102.0020401802310000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18294.5018901444320000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................22286.0017216132527730000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................24283.00166055791122130004
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................22266.501330126520000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................22261.001221109620220000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................23255.50111192143730000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20255.001100103610000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22254.501092109400210000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18237.0074271100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21234.0068057901100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23227.5055051400000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21222.5045024210000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20218.5037092600110000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21218.0036027900000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21217.5035033110000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23216.5033031110000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18215.5031025600000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................23213.0026015610040000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................22213.0026052100000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................24212.5025042000000001
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................18212.0024123000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19212.0024038000130000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................20211.0022012100000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19210.5021018300000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2029.0018013500000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC................................................................................................................................2128.5017001700000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................2428.0016011001220000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1927.5015051000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................2527.5015011200020000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................1827.5015015000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2227.501506720000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................2527.0014010011110000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2127.0014013100000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................2327.001409300020000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2226.501304800010000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1826.001206600000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................2024.50916101000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................2124.00803500000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGT................................................................................................................................2024.00804400000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2124.00808000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC...............................................................................................................................2223.50700700000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2223.50706010000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2123.50716000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2323.50702500000000
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGTA...............................................................................................................................2022.50503200000000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2422.50500500000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2222.50505000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2122.50505000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2322.00404000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................2522.00402110000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................2222.00404000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG...................................................................................................................................................................2422.00403100000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................2222.00402200000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGC....................................................................................................................................................................1922.00401300000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................1822.00401200010000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2421.50303000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2421.50300210000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1921.50300100020000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2321.50300300000000
droEug1
CCTC-----ATCGCGGTGCCATGTGTTCGG-ATC-GGTATGTGTCGATCA---GGC----------------------------------------------T-------ATATCAGTGTAC-----------------------------------------------TATATATCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCG-----CAGTTGGTCATTCTAA------------------------------------------------------ACACCTAAATATCT-----------SizeHit CountTotal NormTotal
No Reads
droBia1
TCTC-----ACCACGGTGCCATGTGTTCGG-ATC-GGGATTCGTCGAGCA---GGC----------------------------------------------C-------AGA-------AG-----------------------------------------------TGTATACGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTG-----CAGGTGACTC-----------------------TCGATCGGTGCAA----------------------GTGCAGGAAAGTATGTTC---------SizeHit CountTotal NormTotal
No Reads
droTak1
TCTC-----ATCGCGATGCCATGTGTTCAG-ATC-GGTATTTGC-----------C----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTACACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTC-----CAGGTGATCAGGCTAT--------ATAAGCCC---------------------------CGTGTGTAAATGCTGGTAAGTATGTTC---------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTC-----ATCACGGTGCCATGTGTTCGG-ATC-GCTATGTGTCCGACG---GAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTATACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTG-----CACCCAATCAAGCTAT--------------------------TGAC----------------------ATCCATGTAAGTATGTTTC--------SizeHit CountTotal NormTotal
No Reads
droRho1
TCTC-----ATCACGGTGCCATGTGTTCGG-ATC-GGTATGTGTCGAATA---AAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TGTATATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-G-----CAAGTAATAAAGCTAT--------CT----------------GCA------------------------TTCCTGTAAGTATGT-----------SizeHit CountTotal NormTotal
No Reads
droFic1
TCTC-----ATCGCGGCAACATGTGTTCGG-ATC-TGTATGTGTCGGATA---GAC----------------------------------------------T-------AAA-------AG-----------------------------------------------TTAATGCAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCACCTTCAACGGAGCAATGTGT--------CC----ACTC---CT---CTTC----------------------GTTAAGGTGAGTATGC-----------SizeHit CountTotal NormTotal
No Reads
droKik1
TCTCATCTCATCACGGTGCCATGTGTGCCG-ATG-GCTATATCTCGCGCATCGGGTATAG---------------AGTATA-----------------TAGT---ATATATAC--AGTGTAA-----------------------------------------------CGTCTATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAG--------------------CTAT--------CTGTATTCTGTGATATATGAAT----------------------GTACAGGTGAGTATAT-----------SizeHit CountTotal NormTotal
No Reads
droAna3
TCTC-----ATCG-GGTGCCATGTGTTCGGGGCCAAGTC-------------------TA-----------------AGTATAAAACGATAGTGCTTTTCTTC-------AAG-------AA-----------------------------------------------CATATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCG------------TCAAAGTCTAAA-----------------------------T-----------------------TA--AAAAATGT-----------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22119287.001928716815447189751454631
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................20110371.001037110172830143072
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2115346.005346498021316312779
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2313307.003307179724335208908116
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2111394.001394139010201
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191667.0066766700000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221495.0049544712171612
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221405.0040517814255678
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201353.0035335300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241264.00264139140137721
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191228.0022822401012
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................181151.00151480238810
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................211145.0014513701223
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221114.001149920418
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221112.0011211020000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................23183.008355107119
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................25170.007040005214
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................23169.00693610500
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20167.00676610000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................19163.00636010200
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21163.00635900004
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................23154.0054112240116
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21151.0051231701100
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18138.00383170000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20137.00373400012
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19136.003611500191
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18136.00363600000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23133.00333300000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................21133.00333300000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18131.00313100000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20130.00302110071
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................19124.00245000190
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18123.00232300000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19123.00232210000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22120.00208120000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24119.0019800362
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................22119.00191030042
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................25117.00171100150
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21117.00171430000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGT..................................................................................................................................19216.003217000150
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................23114.00141111010
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23113.00131300000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................23113.00131010020
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................21112.0012900030
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................22112.00121100010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................20111.00111100000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................21111.00111100000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................18111.00111100000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGA......................................................................................................................................................................20110.00101000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................24110.0010400114
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2119.009900000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2219.009900000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2218.008610010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2018.008610001
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2318.008510011
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................2117.007600001
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................2016.006010050
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................2116.006330000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2016.006330000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2215.005500000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAG..................................................................................................................................................................2515.005500000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGA..................................................................................................................................1915.005100130
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................2215.005400001
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGC....................................................................................................................................................................1914.004040000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1914.004300100
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2014.004400000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2414.004130000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1814.004220000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTA.................................................................................................................................................................2614.004400000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................2514.004100111
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................2414.004220000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAC.....................................................................................................................................................................2213.003020001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTA.....................................................................................................................................................................2213.003300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTAT.................................................................................................................................................................2613.003300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCAG....................................................................................................................................................................2313.003300000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2113.003300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG..................................................................................................................................................................2513.003300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCTG....................................................................................................................................................................2313.003300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT.................................................................................................................................................................2613.003300000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCTA................................................................................................................................2113.003000003
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2213.003210000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................2212.002200000
...........................................................................................................................................................................................................................................GGAAAGGGAAAAAGGCGTA...............................................................................................................................1912.002110000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC................................................................................................................................2112.002020000
droBip1
TCTC-----ATCGGGGTGCCATGTGTTCGG-GCCAAGTC-------------------TAGTGCTTTT------------------------------TTTTCAAAGA------------TA-----------------------------------------------TACATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCG-----AC-------AACGTCTAATTTAGAAC-------------A--TGTC----------------------A-TCATGAAAGT----CTT--------SizeHit CountTotal NormTotal
No Reads
dp5
CCGC-----CTCGTGGTGCCATGTGTTCAA-AAA-AGTC-------------------CGAGGTTTTCGCAGCTAAATATA-----------------TTGTAAAATA--TA--------------C--------------------AA-----------------------AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA--------CAACCGACCCAATTCA--------GC----------------TTAATAA----------------------TAGGTGAGTACATCCC--------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22158028.005802839501481637236322014286542823768
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................21113516.0013516361202761950013761477766
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................20112269.00122694117062871431932476250
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2318815.00881506679641574962586415371
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2114277.0042770427021300010
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2212920.002920012466601038212130147963
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201941.00941093812000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191898.00898089800000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241531.005310408365262234000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................211423.004230231450011945739
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221386.00386038410001000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................191340.00340032854300000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191276.002763723231110010
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................181222.00222020813600400
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................201219.00219021531000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................231210.00210019300257120
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221198.00198017760644010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221195.00195117410738010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................231190.0019001514917333000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................231180.001800609215065110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................211179.00179016921025000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................211134.001340118100002130
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................251118.001180100101311200
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23189.008908710100000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23172.007207200000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20165.006504830205610
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21164.006406301000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18162.006205912000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22162.006208424125000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19157.005705511000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18152.005205100000010
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18141.004104100000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................23141.004102810013080
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................20139.003903431001000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19137.0037016122310300
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24134.003402500106020
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................19128.002802313001000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20125.002512200101000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................23123.002302200100000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................22122.002201730000101
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................21121.002102100000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................22121.002101610101020
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21120.002002135000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................18120.002002000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................22120.002002000000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGT................................................................................................................................20118.001801500000300
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGTA...............................................................................................................................20118.001801700001000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................18115.001501500000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................22115.001501500000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................22114.001401400000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................23114.001401000000031
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................20111.00110620003000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................21111.001101001000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................20110.001001000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................2119.0090810000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................2419.0090270000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2119.0090900000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2418.0080800000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................2018.0080521000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2017.0070700000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC................................................................................................................................2117.0070070000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2117.0070700000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................2417.0070700000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................2517.0070600010000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................2517.0070700000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1916.0060500001000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................1816.0060300102000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2316.0060510000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................2416.0060600000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2015.0050041000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2115.0050410000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT.................................................................................................................................................................2615.0050400001000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................2114.0040200101000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT................................................................................................................................2314.0040120000010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG..................................................................................................................................................................2514.0040400000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC...............................................................................................................................2214.0040020002000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2414.0040210100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................2223.5070700000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................2213.0030300000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTA.....................................................................................................................................................................2213.0030300000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCA.....................................................................................................................................................................1913.0030300000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGC..................................................................................................................................1813.0030300000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2213.0030210000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2413.0030300000000
droPer2
CCGC-----CTCGTGGTGCCATGTGTTCAA-AAA-AGTC-------------------CGAGGTTTTCGCAGCTAAATATA-----------------TTGTAAAATA--TA--------------C--------------------AA-----------------------AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA--------CAACCGACCCAATTCA--------GC----------------TTAATAA----------------------TAGGTGAGTACATCCC--------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22112477.001247730610160883507518103
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2111953.00195314916648428226
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2311886.00188631296135164164124
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2011433.0014332113561121159
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................211814.0081408140000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191206.00206185153111
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221146.00146432611390
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201131.0013101310000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241101.00101058914137
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................19185.00850850000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................23179.007905911171
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................22168.00680670100
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................19148.00480480000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................22146.00465331520
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20137.00370370000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................22133.00330300120
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18131.00312270011
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................25127.00270162072
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23120.00200180011
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18120.00201190000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................23119.00190230113
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................20118.00180110016
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21118.00180140130
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................23113.0013180130
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21111.00111000010
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23111.00110110000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19110.00100100000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2219.009090000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................2218.008041030
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2118.008080000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................1918.008010007
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................2417.007020140
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2117.007070000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2316.006000015
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................2016.006020004
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................2116.006060000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................1815.005050000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1915.005000005
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2115.005041000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................2114.004000004
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................2214.004020002
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2413.003000003
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................1813.003120000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................2513.003020010
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................1813.003030000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................2513.003010020
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................2013.003020010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................2412.002010010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT.................................................................................................................................................................2612.002010010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................2112.002020000
...........................................................................................................................................................................................................................................GGAAAGGGAAAAAGGCGTA...............................................................................................................................1912.002000002
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2012.002020000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2112.002020000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2212.002020000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2212.002010100
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1912.002020000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2312.002020000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2012.002020000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................2211.001010000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCAC....................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2211.001010000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................2221.002020000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGT..................................................................................................................................2011.001000001
........................................................................................................................................................................................................TTTCCGCTTACTGGCGTT...................................................................................................................................................................1811.001001000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2311.001000001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTGA..................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGGC...................................................................................................................................................................2411.001010000
droWil2
-------------------------------ATA-GATATATA-------------------------------------------------------------------TAT-------AA-----------------------------------------------TGTATGTAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTC--------TCCAC-AAAATCT--------------------------CTAC----------------------AACTAAGTAAGTATAAACCTATATAGTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................22138678.003867841623418494133071043
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2113731.00373159328982815062
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2013545.003545963261168092
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2313108.0031083991487154483
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2111959.00195901949082
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................1911138.001138106370032
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221537.005371228622415
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................241261.002610702714816
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................191237.002370236010
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191228.002280228000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201224.002240224000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................181160.001600153070
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................23192.009225641020
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20188.0088085030
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................22179.007911393215
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................22167.0067066010
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21166.00660445170
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23164.0064064000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................22159.0059146093
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18142.0042042000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................23136.0036062271
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................23133.0033032010
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21125.0025022003
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................20123.0023017420
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22119.0019030133
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19117.0017116000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................21117.0017012113
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18115.0015015000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................23115.0015011121
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................21114.001406080
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................23112.001205052
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21112.0012012000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................24111.001106221
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................24111.001103170
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................25110.001004321
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18110.0010010000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................1919.00901611
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................1818.00808000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2117.00707000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................2016.00614001
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1916.00604110
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2016.00606000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2115.00504010
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................2315.00505000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................1815.00501220
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2215.00505000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2014.00404000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................2214.00403100
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................2514.00401003
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2214.00404000
......................................................................................................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT................................................................................................................................2313.00302010
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2213.00303000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2013.00303000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................2113.00300210
................................................................................................................................................................................................TTTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2413.00303000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2313.00302010
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2113.00303000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................2513.00302001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................2213.00302001
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCA.....................................................................................................................................................................1913.00303000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1813.00303000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2312.00201100
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................2112.00211000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................2012.00200200
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2012.00202000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2212.00200020
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGT................................................................................................................................2012.00202000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................2412.00210001
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCGT.....................................................................................................................................................................2211.00101000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAG...................................................................................................................................................................2411.00101000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCTG....................................................................................................................................................................2311.00110000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2011.00101000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG...................................................................................................................................................................2411.00101000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA.................................................................................................................................................................2611.00100010
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1911.00101000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGT.......................................................................................................................................................................1911.00101000
droVir3
TCTT-----GTCAGGGT-CTATATG--------------------------------------------------------------------------------------AA-------AGTATACTTAACTTGATTGT----AT-ATCT------------------TTGATCTATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAAC----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................221201418.00201418356993844920798505775233169396562690001233103624148448919035855366751930315231174825319737174282949394303980197470016767540301000000011214066528701750144506971444011139814041034637140595613442
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................23120563.00205630122993662741862616138541921100011187245649447088610442528327743733929622253826275505172004163106500000000102001000061415654872116200000711453000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................21114667.001466725225553574468497160720003521817942351332971081187579271225563502000007410110000000010135515231152491172871009661055664371100869902012
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................2018039.0080397036549215994112514000001010225002228394422257332106265028000014561100010000081231341012881605709209000861107645926701002
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2215426.0054265036529837199293001054667900060271340202114523433670441156469165524157301580000239000000000000101000112902740392321425712311110
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2113565.003565003504405300000000000004011020011921301000012000000000000000000001100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................1912319.00231943449115820750000000111111521364243856223508000031300000000000000010020600050002262191147320316500000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2411181.001181007714128229133212000751601534536112117171691285819004000001373000000000000000000083275141400010001000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................2111129.0011292085308645962614126000823422156431752161859547106022000031800000000000000000110045031300025101000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................231859.008590020645316105000024325010588813131812213041112014000061600000000000000000002168032500030120100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................221751.00751711164253924115100030010058142213516107164326903200001029000000000000000000016813011000010200000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................221530.00530111373278102000052132211315311111183522575060000413000000000000000000005402900041225500000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................191529.005291042190240000000100320100143331191851100000004000000000000000000010002000000100000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................201483.00483004820000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................251442.00442003111241112310005110341932753975744231050200000135000000000000000000001603300000000000000
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................181421.0042100318607910100000001002203230361351909000015000000000000000000002001100001000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................191402.00402003991000000000000000000100000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................201240.002400020730000000000000000200011116110201000011000000000000000000010100000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................231211.00211001223215267193000300301600021022522623011000004000000000000110000000900200000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................231205.0020500131070417100043002150015472194113310110000020000000000000000010101401000000003000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................221182.00182001680003000000010000020000010031100000001000000000000000000000100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................231142.001420016560441000000000001512011301495702000027000000000000000000010000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................241141.00141001210431020000020100304235202018821050000320000000000000000000071001100000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGT......................................................................................................................................................................211120.0012002562131000000010000021000013121031300000000000000000000000000003301100001000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................181117.0011720850000000000010100000002012340300000010000000000000000000000002500002002100000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................221113.00113003503011814600010000030012000141341404000000000000000000000000000600100000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................231111.0011100961000000000000000000000001131400000000000000000000000000000000000004000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................201110.0011040830601541100000000002102022012323030000010000000000010000001001202000004060000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................21184.008420571000001000000000000000100371500000000000000000000000000002100000000011100000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA..................................................................................................................................................................25175.0075008013000000000000033011011071252003000022000000000000000000000200000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................22171.007100440818212000000000010000012775302000001000000000000000000000300000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................22169.0069105250010000000000000120012000621301000002000000000000000000011400000000000100000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................18166.006600612000000000001000000000000110000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................23165.006500320100020000000100000011219952001000000000000000000000000001402000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGG...................................................................................................................................18152.005200100322048300000000000000000120402000010000000000000000000000100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................23148.004810390000000000000000000010000010201000001000000000000000000000001100000000000000
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................21147.004700391000200000000000000000000100400000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGC..................................................................................................................................19146.004600170403141000100000000000002015020000000000000000000000000001200010000000000001
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................19141.004100270021000000010000000000000221200000011000000000000000000000100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT.................................................................................................................................................................26137.00370020150101000020000001001001133801000033000000000000000000000000000000000000000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................20134.003400153030000000000000010000000621102000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG..................................................................................................................................................................25133.00330051010000000000000010020122340502000003000000000000000000000100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG...................................................................................................................................................................24128.00280070000000000000001000010010542600000000000000000000000000000001000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGG.......................................................................................................................................................................18127.002700270000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................22124.002400240000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................18122.002200130010000000000000010000000340000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................19121.002100210000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGG......................................................................................................................................................................21120.002030115000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................22120.002000160010000000000000000000000100100000000000000000000000000000000000010000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA..................................................................................................................................................................25118.00180050010000000000000010000000233000000001000000000000000000001100000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCG.................................................................................................................................21118.00180001020323000010000000000000002200000000000000000000000000000200000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................20117.00171230000200000000000010020001111100000010000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGTT.....................................................................................................................................................................22116.00160030000000000000000060000000203100000001000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTG........................................................................................................................................................................18115.001500150000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................21115.00150090000000000000000000000010030100000000000000000000000000000100000000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................21115.001500120000000000000000000000000000000000000000000000000000000000000100000000200000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................21114.00140030100000000000000001000000212200000000000000000000000000010100000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA...................................................................................................................................................................24113.00130020110000000000000010000001320100000000000000000000000000001000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAA.....................................................................................................................................................................22112.00120030000000000000000040000000310000000000000000000000000000001000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................21112.001200120000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................21112.001200110000000000000000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGTA...............................................................................................................................20111.00110021000311000000000000000010000100000000000000000000000000010000000000000000000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................22111.00110000023000000000000000000000102101000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG..............................................................................................................................23111.00110020030000000000000000000000110301000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................24110.00100002010000000000000000010000101200000001000000000000000000010000000000000000000
................................................................................................................................................................................................TTTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2419.0090090000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGAT.....................................................................................................................................................................2218.0080000000000000000000070000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................GAAAGGGAAAAAGGCGTA...............................................................................................................................1818.0080020000103000000000000000000020000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGC..................................................................................................................................2018.0080012000102000000000000100000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC...............................................................................................................................2218.0080001021100200000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTAC..........................................................................................................................................................................1717.0070000000000000000000000000000000000000000000000000000010004200000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC................................................................................................................................2117.0070005000001000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGG...................................................................................................................................1917.0070010000102200000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2417.0070060000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC..............................................................................................................................2317.0070000000002000000000010000000020200000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2416.0060010000000000000000000000100120100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCAA....................................................................................................................................................................2316.0060010000000000000000010000000101000000000000000000000000000001100000000000000000
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG...............................................................................................................................2215.0050000010200000000000010000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2215.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2015.0050012100000000000000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2315.0050000100101100000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGT......................................................................................................................................................................2015.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
CTAT-----A-----------------------------------------------------------------------------------------------------GA-------AATATACAT-ACTTAATTGTCAAAATAATATTTGATCTAACTGAATCGATTTTTATATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGA--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACG.....................................................................................................................................................................221168709.00168709149592165959168415556627
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGT....................................................................................................................................................................23130005.00300051307343190126152471038
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACG.....................................................................................................................................................................21110284.001028410239000441
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGAC......................................................................................................................................................................2116406.006406567007770319
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGC....................................................................................................................................................................2312272.0022723400122343
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGA.......................................................................................................................................................................2011945.001945172718151868
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTA...............................................................................................................................2211700.00170017923111269227
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGTT...................................................................................................................................................................2411340.001340682295754275
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACGT....................................................................................................................................................................221813.00813778000341
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACT.....................................................................................................................................................................221718.00718689514262
.......................................................................................................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTA...............................................................................................................................231637.006371690057240
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGAC......................................................................................................................................................................201459.0045945500040
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGACG.....................................................................................................................................................................201444.00444429010131
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGT................................................................................................................................211399.0039921911167110
......................................................................................................................................................................................................TTTTTCCGCTTACTGACG.....................................................................................................................................................................181381.003812621001180
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACA.....................................................................................................................................................................221370.00370348423121
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGACG.....................................................................................................................................................................191348.00348292201530
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGTC...................................................................................................................................................................241152.00152281001212
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGA.......................................................................................................................................................................191151.0015114900020
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGA....................................................................................................................................................................231149.0014913910180
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................191142.0014213701031
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGACG.....................................................................................................................................................................231140.0014013700030
......................................................................................................................................................................................................TTTTTCCGCTTACTGACGT....................................................................................................................................................................19186.008614100692
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGG....................................................................................................................................................................23185.008557100270
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACC.....................................................................................................................................................................22182.008214011660
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGACGT....................................................................................................................................................................20171.007128000412
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18164.00646300010
.......................................................................................................................................................................................................TTTTCCGCTTACTGACGT....................................................................................................................................................................18155.005523000320
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGTTT..................................................................................................................................................................25153.005340100111
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACT.....................................................................................................................................................................21153.00535300000
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGACGT....................................................................................................................................................................21147.00473601091
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACGTT...................................................................................................................................................................23143.00433800050
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCG.................................................................................................................................20133.0033100001310
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGAA......................................................................................................................................................................21132.00323200000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGTA...................................................................................................................................................................24130.00302420022
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGAT......................................................................................................................................................................21128.002811001160
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACA.....................................................................................................................................................................21125.00252500000
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGAC......................................................................................................................................................................18124.00241900050
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................20121.00211511040
.......................................................................................................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGT................................................................................................................................22120.00203000152
.........................................................................................................................................................................................................................................CAGGGAAGGGAAAAAGGCGTA...............................................................................................................................21120.00204000151
......................................................................................................................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGTA...............................................................................................................................24119.00191000180
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAT..............................................................................................................................23117.0017400049
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAA..............................................................................................................................23116.0016500056
.........................................................................................................................................................................................................................................CAGGGAAGGGAAAAAGGCGT................................................................................................................................20115.00151400010
......................................................................................................................................................................................................TTTTTCCGCTTACTGACGC....................................................................................................................................................................19114.00140000140
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGACGT....................................................................................................................................................................24113.00131000030
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTT...............................................................................................................................22113.0013300073
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACGTG...................................................................................................................................................................24113.00131000030
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGAC......................................................................................................................................................................22112.00121000020
.......................................................................................................................................................................................................................................GGCAGGGAAGGGAAAAAGGCG.................................................................................................................................21111.0011100055
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGC..................................................................................................................................19111.0011200036
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGACGC....................................................................................................................................................................22110.0010200080
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGC................................................................................................................................21110.00100000100
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGAC......................................................................................................................................................................1919.009900000
.......................................................................................................................................................................................................TTTTCCGCTTACTGACGC....................................................................................................................................................................1819.009000090
......................................................................................................................................................................................................TTTTTCCGCTTACTGACGTT...................................................................................................................................................................2018.008300050
..........................................................................................................................................................................................................................................AGGGAAGGGAAAAAGGCGTA...............................................................................................................................2018.008200060
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGACGC....................................................................................................................................................................2017.007000070
.......................................................................................................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTAT..............................................................................................................................2417.007000061
........................................................................................................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTC...............................................................................................................................2217.007000070
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGAAA.....................................................................................................................................................................2217.007700000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGT.......................................................................................................................................................................2016.006600000
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGAG......................................................................................................................................................................2116.006300030
......................................................................................................................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGT................................................................................................................................2316.006100050
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGACAC....................................................................................................................................................................2315.005000050
droGri2
TTTT-----ACCAGAG--------------------------------------AC--TAAACATTTTGTG--TATAAGTA-----------------TTGTATG-----ATT-------AA-----------------------------------------------GCAATCTTCAGAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAAC----------CT-ATTCAAATAT--------CT----------------ATAAAGCTAGAAC-------------A-ACTGGTGAGT---------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2215550.0055505369181
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................211487.004874870
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................231473.00473288185
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................211389.003893863
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGG.......................................................................................................................................................................201146.001461415
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................221102.001026042
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCG.....................................................................................................................................................................18140.0040400
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCG.....................................................................................................................................................................19136.0036360
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................24133.00331914
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGC......................................................................................................................................................................20126.0026260
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................22123.0023230
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................20119.0019190
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACT.........................................................................................................................................................................18118.0018180
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT................................................................................................................................21113.0013103
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................22110.001091
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2319.00972
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGG.......................................................................................................................................................................1918.00880
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2318.00853
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2317.00752
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGCG.....................................................................................................................................................................2317.00770
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGC......................................................................................................................................................................1817.00770
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGC....................................................................................................................................................................2317.00743
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTG........................................................................................................................................................................1916.00660
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA...............................................................................................................................2116.00660
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCA.....................................................................................................................................................................2215.00550
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT..................................................................................................................................................................2514.00422
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCG.................................................................................................................................2013.00321
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA..............................................................................................................................2313.00321
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCGT................................................................................................................................2013.00330
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2213.00321
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2113.00330
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA...................................................................................................................................................................2413.00321
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCT.....................................................................................................................................................................2112.00220
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGT....................................................................................................................................................................2012.00220
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC...................................................................................................................................................................2412.00211
....................................................................................................................................................................................................TCTTTTTCCGCTTACTGGC......................................................................................................................................................................1912.00220
...................................................................................................................................................................................................GTCTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2212.00220
..........................................................................................................................................................................................................................................AGGAAAGGGAAAAAGGCGTA...............................................................................................................................2011.00110
.........................................................................................................................................................................................................................................CAGGAAAGGGAAAAAGGCG.................................................................................................................................1911.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGCC...................................................................................................................................................................2411.00110
.......................................................................................................................................................................................................TTTTCCGCTTACTGGCGT....................................................................................................................................................................1811.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGC.......................................................................................................................................................................2011.00110
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGA....................................................................................................................................................................2011.00110
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAG.............................................................................................................................2411.00110
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT..............................................................................................................................2311.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGCG......................................................................................................................................................................2111.00110
........................................................................................................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTTG..............................................................................................................................2311.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGA......................................................................................................................................................................2111.00110
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGTT...................................................................................................................................................................2111.00110
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT...............................................................................................................................2311.00101
.................................................................................................................................................................................................TTGTCTTTTTCCGCTTACTGGC......................................................................................................................................................................2211.00110
......................................................................................................................................................................................................TTTTTCCGCTTACTGGCGT....................................................................................................................................................................1911.00110
.......................................................................................................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT................................................................................................................................2211.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGGA...................................................................................................................................................................2411.00110
............................................................................................................................................................................................................................................GAAAGGGAAAAAGGCGTAA..............................................................................................................................1911.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCC.....................................................................................................................................................................2211.00110
..................................................................................................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAG..................................................................................................................................................................2511.00110
.....................................................................................................................................................................................................CTTTTTCCGCTTACTGGCGG....................................................................................................................................................................2011.00110

Generated: 10/20/2015 at 06:50 PM