ID:

dse-mir-312

 Coordinate:

scaffold_1:14025763-14025828 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.9 -25.8 -25.8

Flybase annnotation

pre_miRNA [Dsec\mir-312-RM]; utr3 [utr3_minus_3796]; miRNA [Dsec\miR-312-RA]

No Repeatable elements found

Sense Strand Reads

ACAATTTAAATTTTTAAATTATTATAAATAATGGGAATTAAGTTTAAAGCGTTTTGGTTCGTCACAAGGGCAATTCTGCATTTTTAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAAAGAATCATCATTGAGCAAAGTAATTAGTTTTTTTTCCTTGC

***************************************...(((((((...((((((.((((.((((.(((((...(((..........)))))))).)))).))))))))))...)))))))....************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V113

male body		 V115

head
............................................................................................TATTGCACTTGAGACGGCCGA..................................................... 21 0 1 6003.00 6003 3515 1963 321 204
............................................................................................TATTGCACTTGAGACGGCCGAA.................................................... 22 0 1 5112.00 5112 3805 960 200 147
............................................................................................TATTGCACTTGAGACGGCCGAAA................................................... 23 1 1 2950.00 2950 1767 1006 69 108
............................................................................................TATTGCACTTGAGACGGCCGAAAA.................................................. 24 2 1 626.00 626 253 321 22 30
......................................................TGGTTCGTCACAAGGGCAATT........................................................................................... 21 0 1 602.00 602 406 129 51 16
......................................................TGGTTCGTCACAAGGGCAATTCT......................................................................................... 23 0 1 470.00 470 276 114 50 30
............................................................................................TATTGCACTTGAGACGGCCG...................................................... 20 0 1 466.00 466 184 219 44 19
......................................................TGGTTCGTCACAAGGGCAATTC.......................................................................................... 22 0 1 326.00 326 137 122 48 19
............................................................................................TATTGCACTTGAGACGGCCGAAT................................................... 23 0 1 292.00 292 125 81 82 4
............................................................................................TATTGCACTTGAGACGGCCGAT.................................................... 22 1 1 251.00 251 98 74 68 11
.............................................................................................ATTGCACTTGAGACGGCCGAA.................................................... 21 0 1 238.00 238 228 8 2 0
.............................................................................................ATTGCACTTGAGACGGCCGA..................................................... 20 0 1 195.00 195 182 9 2 2
.............................................................................................ATTGCACTTGAGACGGCCGAAA................................................... 22 1 1 140.00 140 128 8 1 3
............................................................................................TATTGCACTTGAGACGGCCGAAAAA................................................. 25 2 1 139.00 139 61 66 4 8
......................................................TGGTTCGTCACAAGGGCAAT............................................................................................ 20 0 1 105.00 105 28 50 25 2
............................................................................................TATTGCACTTGAGACGGCCGATA................................................... 23 2 1 75.00 75 13 22 34 6
............................................................................................TATTGCACTTGAGACGGCCGAAC................................................... 23 1 1 59.00 59 44 9 4 2
......................................................TGGTTCGTCACAAGGGCAATTCTGCA...................................................................................... 26 0 1 44.00 44 22 8 9 5
............................................................................................TATTGCACTTGAGACGGCCGAAG................................................... 23 1 1 44.00 44 26 16 2 0
............................................................................................TATTGCACTTGAGACGGCCGAAAT.................................................. 24 1 1 41.00 41 8 11 20 2
............................................................................................TATTGCACTTGAGACGGCCGATT................................................... 23 1 1 38.00 38 3 3 31 1
............................................................................................TATTGCACTTGAGACGGCCGT..................................................... 21 1 1 37.00 37 4 16 14 3
............................................................................................TATTGCACTTGAGACGGCCGGA.................................................... 22 1 1 36.00 36 34 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGG..................................................... 21 1 1 31.00 31 28 3 0 0
............................................................................................TATTGCACTTGAGACGGCCGATAA.................................................. 24 3 1 30.00 30 4 22 4 0
............................................................................................TATTGCACTTGAGACGGCCGAC.................................................... 22 1 1 30.00 30 19 9 2 0
............................................................................................TATTGCACTTGAGACGGCCGAAAAAA................................................ 26 3 1 29.00 29 8 14 1 6
.............................................................................................ATTGCACTTGAGACGGCCGAAT................................................... 22 0 1 29.00 29 21 3 4 1
............................................................................................TATTGCCCTTGAGACGGCCGAA.................................................... 22 1 1 28.00 28 27 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTCA......................................................................................... 23 1 1 24.00 24 10 11 1 2
............................................................................................TATTGCCCTTGAGACGGCCGA..................................................... 21 1 1 24.00 24 24 0 0 0
......................................................TGGTTCGTCACAAGGGCAA............................................................................................. 19 0 1 23.00 23 3 9 10 1
............................................................................................TATTGCACTTGAGACGGCC....................................................... 19 0 1 23.00 23 6 11 3 3
............................................................................................TATTGCACTTGAGACGGACGA..................................................... 21 1 1 23.00 23 23 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTCTA........................................................................................ 24 1 1 22.00 22 20 1 1 0
..............................................................................................TTGCACTTGAGACGGCCGA..................................................... 19 0 1 22.00 22 14 8 0 0
.......................................................GGTTCGTCACAAGGGCAATTCT......................................................................................... 22 0 1 21.00 21 21 0 0 0
............................................................................................TATTGCACTTGAGACGGC........................................................ 18 0 1 21.00 21 1 16 0 4
.............................................................................................ATTGCACTTGAGACGGCCGAAAA.................................................. 23 2 1 20.00 20 18 0 2 0
.......................................................GGTTCGTCACAAGGGCAATT........................................................................................... 20 0 1 20.00 20 20 0 0 0
............................................................................................TATTGCACTTGAGACGGCCAAA.................................................... 22 1 1 18.00 18 15 2 0 1
......................................................TGGTTCGTCACAAGGGCAATTT.......................................................................................... 22 1 1 18.00 18 0 4 14 0
............................................................................................TATTGCACTTGAGACTGCCGA..................................................... 21 1 1 18.00 18 14 2 1 1
............................................................................................TATTCCACTTGAGACGGCCGAA.................................................... 22 1 1 17.00 17 13 2 1 1
............................................................................................TATTGCACTTGAGACGGCCGATAT.................................................. 24 2 1 17.00 17 0 1 15 1
............................................................................................TATTGCACTTGAGACTGCCGAA.................................................... 22 1 1 16.00 16 14 2 0 0
............................................................................................TATTGCACTTGAGATGGCCGA..................................................... 21 1 1 16.00 16 5 10 1 0
............................................................................................TATTGCACTTGAGATGGCCGAA.................................................... 22 1 1 15.00 15 6 8 0 1
............................................................................................TATTGTACTTGAGACGGCCGA..................................................... 21 1 1 15.00 15 6 9 0 0
............................................................................................TATTGCACTTGAGACGGCCAAAA................................................... 23 2 1 14.00 14 10 3 0 1
............................................................................................TATTGCACTTGAGACAGCCGAA.................................................... 22 1 1 13.00 13 7 5 0 1
............................................................................................TATTGCACTTGAGACGGACGAA.................................................... 22 1 1 13.00 13 13 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTA.......................................................................................... 22 1 1 13.00 13 7 3 3 0
............................................................................................TATTGCACTTGAGACGGCCGTT.................................................... 22 2 1 13.00 13 2 5 4 2
.............................................................................................ATTGCACTTGAGACGGCCG...................................................... 19 0 1 13.00 13 12 1 0 0
...........................................................................................CTATTGCACTTGAGACGGCCGA..................................................... 22 1 1 13.00 13 12 1 0 0
............................................................................................TATTGCACTTGAGACGTCCGAA.................................................... 22 1 1 12.00 12 11 0 1 0
............................................................................................TATTGCCCTTGAGACGGCCGAAA................................................... 23 2 1 12.00 12 12 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAG.................................................... 22 1 1 12.00 12 4 5 2 1
............................................................................................TATTGCACTTGAGACGGCCTAA.................................................... 22 1 1 12.00 12 11 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTAAA........................................................................................ 24 3 1 12.00 12 6 4 1 1
............................................................................................TATTGCACTTGAGACGGCCGAATT.................................................. 24 0 1 12.00 12 2 0 9 1
............................................................................................TATTGCACTTGAGACGGCCGGAA................................................... 23 2 1 11.00 11 10 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGATTT.................................................. 24 1 1 11.00 11 0 1 10 0
............................................................................................TATTGCAATTGAGACGGCCGA..................................................... 21 1 1 11.00 11 9 2 0 0
..............................................................................................TTGCACTTGAGACGGCCGAA.................................................... 20 0 1 11.00 11 9 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGACA................................................... 23 2 1 11.00 11 4 6 0 1
............................................................................................TATTGCATTTGAGACGGCCGAA.................................................... 22 1 1 10.00 10 2 7 1 0
............................................................................................TATTGCACTTGAGGCGGCCGA..................................................... 21 1 1 10.00 10 2 7 1 0
............................................................................................TATTGCACTTGAGACGCCCGAA.................................................... 22 1 1 10.00 10 7 1 2 0
............................................................................................TATTGCACTTGTGACGGCCGAA.................................................... 22 1 1 10.00 10 9 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGTTT................................................... 23 2 1 10.00 10 0 0 9 1
...........................................................................................CTATTGCACTTGAGACGGCCGAA.................................................... 23 1 1 10.00 10 8 2 0 0
......................................................TGGTTCGTCACAAGGGCAATTCTG........................................................................................ 24 0 1 10.00 10 5 3 2 0
......................................................TGGTTCGTCACAAGGGCAATTCTGC....................................................................................... 25 0 1 9.00 9 5 4 0 0
............................................................................................CATTGCACTTGAGACGGCCGA..................................................... 21 1 1 9.00 9 8 1 0 0
......................................................TGTTTCGTCACAAGGGCAATT........................................................................................... 21 1 1 9.00 9 9 0 0 0
............................................................................................TATTGCACTTGATACGGCCGAA.................................................... 22 1 1 9.00 9 8 1 0 0
............................................................................................TATTACACTTGAGACGGCCGA..................................................... 21 1 1 9.00 9 7 1 0 1
............................................................................................AATTGCACTTGAGACGGCCGAA.................................................... 22 1 1 8.00 8 7 1 0 0
............................................................................................TATTGCACTTGAGACGGCTGA..................................................... 21 1 1 8.00 8 1 3 4 0
............................................................................................TATTGCACTTGAGACGGCCGATAAA................................................. 25 3 1 8.00 8 3 1 3 1
............................................................................................TATTGCACTTGAGACTGCCGAAA................................................... 23 2 1 8.00 8 6 1 1 0
..............................................................................................TTGCACTTGAGACGGCCGAAA................................................... 21 1 1 8.00 8 5 3 0 0
............................................................................................TATTGCACTTGAGACGGCCTAAA................................................... 23 2 1 8.00 8 3 3 0 2
...........................................................................................GTATTGCACTTGAGACGGCCGAA.................................................... 23 0 1 8.00 8 8 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTCC......................................................................................... 23 1 1 8.00 8 4 3 1 0
............................................................................................TATTGCACTTGAGCCGGCCGA..................................................... 21 1 1 7.00 7 0 4 3 0
............................................................................................TATTGCACCTGAGACGGCCGA..................................................... 21 1 1 7.00 7 1 6 0 0
............................................................................................GATTGCACTTGAGACGGCCGA..................................................... 21 1 1 7.00 7 5 2 0 0
............................................................................................TATTGCACTTAAGACGGCCGAA.................................................... 22 1 1 7.00 7 4 1 0 2
............................................................................................TATCGCACTTGAGACGGCCGAA.................................................... 22 1 1 7.00 7 6 1 0 0
............................................................................................TATTGCACTTGAGACGGCCTGA.................................................... 22 2 1 7.00 7 0 7 0 0
............................................................................................TATTGCACTTGAGACGGCCAA..................................................... 21 1 1 7.00 7 6 0 1 0
............................................................................................TATTGCACTTGAGACGGCCGTA.................................................... 22 1 1 7.00 7 0 2 5 0
............................................................................................TATTGCACTTGAGACAGCCGA..................................................... 21 1 1 7.00 7 3 4 0 0
............................................................................................TATTGCATTTGAGACGGCCGA..................................................... 21 1 1 7.00 7 1 6 0 0
............................................................................................TAGTGCACTTGAGACGGCCGAA.................................................... 22 1 1 6.00 6 6 0 0 0
............................................................................................TATTGCACTTGAGAAGGCCGAAA................................................... 23 2 1 6.00 6 0 5 1 0
......................................................TGGTTCGTCACAAGGGCAATA........................................................................................... 21 1 1 6.00 6 3 0 2 1
............................................................................................TATTGCACTTGAGACGGCCGAACA.................................................. 24 2 1 6.00 6 3 2 1 0
............................................................................................TATTGCACTTGAGAAGGCCGA..................................................... 21 1 1 6.00 6 0 5 0 1
............................................................................................TATTTCACTTGAGACGGCCGAAA................................................... 23 2 1 6.00 6 3 3 0 0
............................................................................................TATTGCACTTGAGACGGACGAAA................................................... 23 2 1 6.00 6 6 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAATTT................................................. 25 1 1 6.00 6 1 0 5 0
............................................................................................TATTGCACTTGAGACGGCCGAATA.................................................. 24 1 1 6.00 6 3 0 3 0
............................................................................................TATTGCACTTGAGACGACCGA..................................................... 21 1 1 6.00 6 1 4 0 1
............................................................................................CATTGCACTTGAGACGGCCGAA.................................................... 22 1 1 6.00 6 4 1 0 1
...........................................................................................GTATTGCACTTGAGACGGCCGA..................................................... 22 0 1 6.00 6 6 0 0 0
............................................................................................TATTCCACTTGAGACGGCCGA..................................................... 21 1 1 6.00 6 5 1 0 0
............................................................................................TATTGCGCTTGAGACGGCCGAAA................................................... 23 2 1 6.00 6 2 4 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAAAT................................................. 25 3 1 6.00 6 1 3 2 0
......................................................TGGTTTGTCACAAGGGCAATT........................................................................................... 21 1 1 6.00 6 1 5 0 0
............................................................................................TATTGCACTTGAGATGGCCGAAA................................................... 23 2 1 5.00 5 1 2 0 2
............................................................................................TATTGCACTTGTGACGGCCGAAA................................................... 23 2 1 5.00 5 5 0 0 0
............................................................................................TATTGCACTTGAGACGGCCTA..................................................... 21 1 1 5.00 5 5 0 0 0
............................................................................................TATTGCACTTGAGACGCCCGA..................................................... 21 1 1 5.00 5 3 2 0 0
............................................................................................TATTGCACTTGAGACGGCAGA..................................................... 21 1 1 5.00 5 1 1 3 0
......................................................TGGTTCGTCACAAGGGCACTT........................................................................................... 21 1 1 5.00 5 1 1 3 0
............................................................................................TATTGCACTTGAGACGGCCGATTAT................................................. 25 3 1 5.00 5 0 0 4 1
............................................................................................TGTTGCACTTGAGACGGCCGAA.................................................... 22 1 1 5.00 5 4 1 0 0
............................................................................................TATTGCACTTGAGACGGCGGA..................................................... 21 1 1 5.00 5 1 0 4 0
............................................................................................TATCGCACTTGAGACGGCCGA..................................................... 21 1 1 5.00 5 3 1 0 1
............................................................................................TATTGCACTTCAGACGGCCGA..................................................... 21 1 1 5.00 5 4 1 0 0
............................................................................................TATTGCACTTGAGACGGCTGAAA................................................... 23 2 1 5.00 5 1 1 3 0
............................................................................................TATTTCACTTGAGACGGCCGAA.................................................... 22 1 1 5.00 5 4 0 0 1
............................................................................................TATTGCACTTGAGACGGTCGA..................................................... 21 1 1 5.00 5 0 4 1 0
............................................................................................TATTGCACTTGAGTCGGCCGA..................................................... 21 1 1 5.00 5 2 3 0 0
............................................................................................AATTGCACTTGAGACGGCCGA..................................................... 21 1 1 5.00 5 5 0 0 0
............................................................................................TATTGCACTTGAGGCGGCCGAA.................................................... 22 1 1 5.00 5 3 0 2 0
............................................................................................TCTTGCACTTGAGACGGCCGA..................................................... 21 1 1 5.00 5 0 4 0 1
............................................................................................TGTTGCACTTGAGACGGCCGAAA................................................... 23 2 1 5.00 5 5 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAAG.................................................. 24 2 1 5.00 5 3 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAAC.................................................. 24 2 1 5.00 5 4 0 0 1
............................................................................................TATTGCACTTGAGACTGCCGAT.................................................... 22 2 1 5.00 5 3 0 2 0
...........................................................................................TTATTGCACTTGAGACGGCCGA..................................................... 22 1 1 5.00 5 5 0 0 0
............................................................................................TATTGCACTTGAGACGCCCGAAA................................................... 23 2 1 5.00 5 4 1 0 0
............................................................................................TATTGCATTTGAGACGGCCGAAA................................................... 23 2 1 5.00 5 0 5 0 0
............................................................................................TATTGCACTTGAGACCGCCGA..................................................... 21 1 1 4.00 4 1 2 0 1
............................................................................................TATTGCACTTGAGACGGCCGAACT.................................................. 24 1 1 4.00 4 0 1 3 0
............................................................................................TATTGCACTTGAGACGGCCGC..................................................... 21 1 1 4.00 4 0 3 1 0
............................................................................................TATTGCACTTGATACGGCCGAAA................................................... 23 2 1 4.00 4 3 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTCTGCAA..................................................................................... 27 1 1 4.00 4 3 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGACT................................................... 23 1 1 4.00 4 2 1 1 0
............................................................................................AATTGCACTTGAGACGGCCGAAA................................................... 23 2 1 4.00 4 4 0 0 0
............................................................................................TATTGCACTTGAGACGGTCGAAA................................................... 23 2 1 4.00 4 1 3 0 0
............................................................................................TATTGCACTAGAGACGGCCGA..................................................... 21 1 1 4.00 4 1 3 0 0
............................................................................................TATTGCACTTGGGACGGCCGA..................................................... 21 1 1 4.00 4 0 3 0 1
......................................................TGGTTCGTCACAAGGGCA.............................................................................................. 18 0 1 4.00 4 1 2 1 0
.............................................................................................ATTGCACTTGAGACGGCCGAAAAA................................................. 24 2 1 4.00 4 2 2 0 0
......................................................TGGTTCGTCACAAGGGCAATTTT......................................................................................... 23 1 1 4.00 4 1 0 3 0
.............................................................................................ATTGCAATTGAGACGGCCGAA.................................................... 21 1 1 4.00 4 4 0 0 0
......................................................TGGTTCGTCACAAGGGCCATT........................................................................................... 21 1 1 4.00 4 4 0 0 0
............................................................................................TATTGCACTTGAGTCGGCCGAAA................................................... 23 2 1 4.00 4 3 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTAA......................................................................................... 23 2 1 4.00 4 0 4 0 0
.............................................................................................ATTGCACTTGAGACGGCCGAAC................................................... 22 1 1 4.00 4 4 0 0 0
............................................................................................TATTGCACTTGAGACGACCGAA.................................................... 22 1 1 4.00 4 4 0 0 0
............................................................................................TATTGCACTCGAGACGGCCGA..................................................... 21 1 1 4.00 4 2 2 0 0
............................................................................................TATTGCAATTGAGACGGCCGAA.................................................... 22 1 1 4.00 4 4 0 0 0
............................................................................................TATTGCACTTGAGACGTCCGA..................................................... 21 1 1 4.00 4 3 1 0 0
..............................................................................................TTGCACTTGAGACGGCCG...................................................... 18 0 1 4.00 4 1 3 0 0
...........................................................................................CTATTGCACTTGAGACGGCCGAAA................................................... 24 2 1 4.00 4 3 1 0 0
......................................................TGGTTCGTCACAAGGTCAATT........................................................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCAGAA.................................................... 22 1 1 3.00 3 0 0 2 1
............................................................................................TATTGCACTTGAGACGACCGAAA................................................... 23 2 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAAAC................................................. 25 3 1 3.00 3 2 1 0 0
............................................................................................TATTGCACTTGTGACGGCCGA..................................................... 21 1 1 3.00 3 2 1 0 0
............................................................................................TATTGCACTTGAGACGGCTGAA.................................................... 22 1 1 3.00 3 2 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGATC................................................... 23 2 1 3.00 3 2 0 1 0
............................................................................................TATTGCAATTGAGACGGCCGAAA................................................... 23 2 1 3.00 3 3 0 0 0
............................................................................................TATTGCACCTGAGACGGCCGAA.................................................... 22 1 1 3.00 3 2 0 1 0
........................................................GTTCGTCACAAGGGCAATT........................................................................................... 19 0 1 3.00 3 3 0 0 0
............................................................................................TGTTGCACTTGAGACGGCCGA..................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGTAT................................................... 23 1 1 3.00 3 0 0 3 0
............................................................................................AATTGCACTTGAGACGGCCGAAT................................................... 23 1 1 3.00 3 3 0 0 0
............................................................................................TATTTCACTTGAGACGGCCGA..................................................... 21 1 1 3.00 3 1 2 0 0
............................................................................................TTTTGCACTTGAGACGGCCGAA.................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TATTCCACTTGAGACGGCCGAAAA.................................................. 24 3 1 3.00 3 0 3 0 0
..............................................................................................TTGCACTTGAGACGGCCGAAT................................................... 21 0 1 3.00 3 1 2 0 0
......................................................TGGTTCGTCACAATGGCAATT........................................................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGATTTAT................................................ 26 2 1 3.00 3 0 0 3 0
......................................................TTGTTCGTCACAAGGGCAATT........................................................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAATT................................................. 25 2 1 3.00 3 1 2 0 0
...........................................................................................ATATTGCACTTGAGACGGCCGAA.................................................... 23 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTTAGACGGCCGAA.................................................... 22 1 1 3.00 3 2 0 0 1
.......................................................GGTTCGTCACAAGGGCAATTCTA........................................................................................ 23 1 1 3.00 3 3 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTCCA........................................................................................ 24 2 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAATAAA................................................ 26 2 1 3.00 3 1 0 2 0
.......................................................GGTTCGTCACAAGGGCAATTC.......................................................................................... 21 0 1 3.00 3 3 0 0 0
............................................................................................TATAGCACTTGAGACGGCCGA..................................................... 21 1 1 3.00 3 1 2 0 0
............................................................................................TATTGCACTTGAGACCGCCGAA.................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTAAGACGGCCGAAA................................................... 23 2 1 3.00 3 2 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGATTA.................................................. 24 2 1 3.00 3 0 0 3 0
............................................................................................TATTCCACTTGAGACGGCCGAAA................................................... 23 2 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAATAA................................................. 25 1 1 3.00 3 0 3 0 0
............................................................................................TATTGCACTTGAGACGGCCGGAAAA................................................. 25 3 1 3.00 3 3 0 0 0
............................................................................................TATTGCACCTGAGACGGCCGAAA................................................... 23 2 1 3.00 3 1 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGAATATA................................................ 26 3 1 3.00 3 0 0 3 0
............................................................................................TTTTGCACTTGAGACGGCCGA..................................................... 21 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTCGAGACGGCCGAAA................................................... 23 2 1 3.00 3 1 2 0 0
............................................................................................TATTGCACTTGAGCCGGCCGAA.................................................... 22 1 1 3.00 3 0 2 0 1
...........................................................................................GTATTGCACTTGAGACGGCCGAAA................................................... 24 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCGCTTGAGACGGCCGA..................................................... 21 1 1 3.00 3 1 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGATATA................................................. 25 2 1 3.00 3 0 0 3 0
............................................................................................TATCGCACTTGAGACGGCCGAAAA.................................................. 24 3 1 3.00 3 3 0 0 0
............................................................................................TATTGCACTTGAGTCGGCCGAA.................................................... 22 1 1 3.00 3 3 0 0 0
............................................................................................TATTGCCCTTGAGACGGCCGAAAA.................................................. 24 3 2 2.50 5 5 0 0 0
...........................................................................................ATATTGCACTTGAGACGGCCGA..................................................... 22 1 1 2.00 2 2 0 0 0
.............................................................................................ATTGCACTTGAGACGGCC....................................................... 18 0 1 2.00 2 2 0 0 0
........................................................GTTCGTCACAAGGGCAATTCT......................................................................................... 21 0 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGATG................................................... 23 2 1 2.00 2 0 0 2 0
.......................................................TGTTCGTCACAAGGGCAAT............................................................................................ 19 1 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACGGACGAAAAA................................................. 25 3 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAATTA................................................. 25 0 1 2.00 2 1 0 1 0
......................................................TGGTTCGTCACAAGGGCAATTCAAA....................................................................................... 25 3 1 2.00 2 0 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGCA.................................................... 22 1 1 2.00 2 0 1 1 0
...........................................................................................ATATTGCACTTGAGACGGCCG...................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGACGAAC................................................... 23 2 1 2.00 2 2 0 0 0
.............................................................................................ATTGCACTTGAGACGGCAGA..................................................... 20 1 1 2.00 2 2 0 0 0
......................................................TGGTTCGTCACAAGTGCAATT........................................................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGGGACGGCCGAA.................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGTCCGAAA................................................... 23 2 1 2.00 2 2 0 0 0
......................................................TGTTTCGTCACAAGGGCAATTCT......................................................................................... 23 1 1 2.00 2 2 0 0 0
.............................................................................................ATTGCACTTGAGACTGCCGAA.................................................... 21 1 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGTATT.................................................. 24 1 1 2.00 2 0 0 2 0
............................................................................................TATTGCACTTGAGACGGCGAA..................................................... 21 2 1 2.00 2 0 1 1 0
......................................................TGGTTCGTCACAAGGGCAATTAT......................................................................................... 23 1 1 2.00 2 0 1 1 0
............................................................................................TATTGCACTTGAGACGGCCGAAAAG................................................. 25 3 1 2.00 2 1 1 0 0
............................................................................................TATTGAACTTGAGACGGCCGAAA................................................... 23 2 1 2.00 2 0 2 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAATA................................................. 25 1 1 2.00 2 0 0 2 0
.............................................................................................ATTGCACTTGCGACGGCCGA..................................................... 20 1 1 2.00 2 2 0 0 0
......................................................TGGTTCGTCACAAGGGCAATG........................................................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGATACGGCCTAA.................................................... 22 2 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGTCGAA.................................................... 22 1 1 2.00 2 1 1 0 0
............................................................................................TATTGTACTTGAGACGGCCG...................................................... 20 1 1 2.00 2 0 1 1 0
.....................................................TTGGTTCGTCACAAGGGCAATT........................................................................................... 22 0 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGATATAA................................................ 26 3 1 2.00 2 0 0 2 0
............................................................................................TATTGTACTTGAGACGGCCGAAA................................................... 23 2 1 2.00 2 1 1 0 0
.............................................................................................ATTGCACTTGAGACGGCCTAA.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGTACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGCGACGGCCGAA.................................................... 22 1 1 2.00 2 0 1 1 0
.............................................................................................ATTGCACTTGAGACGGCCGAAG................................................... 22 1 1 2.00 2 2 0 0 0
.......................................................GGTTCGTCACAAGGTCAATT........................................................................................... 20 1 1 2.00 2 2 0 0 0
............................................................................................TAGTGCACTTGAGACGGCCGA..................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGCGACGGCCGAAA................................................... 23 2 1 2.00 2 0 2 0 0
............................................................................................TCTTGCACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 0 2 0 0
.............................................................................................ATTGCACTTGAGACGGCCAA..................................................... 20 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGCAAA.................................................. 24 3 1 2.00 2 0 1 0 1
............................................................................................TATTGCACTTGAGACGGCTG...................................................... 20 1 1 2.00 2 0 1 1 0
............................................................................................TATTGCTCTTGAGACGGCCGA..................................................... 21 1 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACGGCCCA..................................................... 21 1 1 2.00 2 1 1 0 0
................................................................................................GCACTTGAGACGGCCGAA.................................................... 18 0 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACCGCCGAAA................................................... 23 2 1 2.00 2 2 0 0 0
............................................................................................GATTGCACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 2 0 0 0
......................................................TGGTTCGTCATAAGGGCAATTC.......................................................................................... 22 1 1 2.00 2 0 2 0 0
......................................................TGGTTCGTCACAGGGGCAATT........................................................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGGAAA.................................................. 24 3 1 2.00 2 2 0 0 0
.....................................................CTGGTTCGTCACAAGGGCAATTCT......................................................................................... 24 1 1 2.00 2 2 0 0 0
.......................................................TGTTCGTCACAAGGGCAATTC.......................................................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGAACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGAAACT................................................. 25 3 1 2.00 2 2 0 0 0
......................................................TGGATCGTCACAAGGGCAA............................................................................................. 19 1 1 2.00 2 0 0 2 0
............................................................................................TATTGCACTTGAGACGGCCGGT.................................................... 22 2 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCCGGAT................................................... 23 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGATGGCCGAAT................................................... 23 1 1 2.00 2 1 1 0 0
......................................................TGGTTCGTCACAAGGGCAAAA........................................................................................... 21 2 1 2.00 2 0 0 2 0
............................................................................................TATCGCACTTGAGACGGCCGAAA................................................... 23 2 1 2.00 2 1 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTCAA........................................................................................ 24 2 1 2.00 2 2 0 0 0
......................................................TGGTTCGTCACAAGGGCAATTCTT........................................................................................ 24 1 1 2.00 2 2 0 0 0
.............................................................................................ATTGAACTTGAGACGGCCGAA.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTCCACTTGAGACGGCCGAT.................................................... 22 2 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGCTGATT................................................... 23 2 1 2.00 2 0 0 2 0
............................................................................................TATTGCACTTGAGACGGCCGACAA.................................................. 24 3 1 2.00 2 0 2 0 0
......................................................TGGTTCGTCACAAGGGAAATTCT......................................................................................... 23 1 1 2.00 2 1 1 0 0
......................................................TGGTTCGTCAAAAGGGCAATT........................................................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTCCACTTGAGACGGCCG...................................................... 20 1 1 2.00 2 0 2 0 0
.....................................................CTGGTTCGTCACAAGGGCAATT........................................................................................... 22 1 1 2.00 2 2 0 0 0
..............................................................................................TTGCACTTGAGACGGCCGAAAA.................................................. 22 2 1 2.00 2 2 0 0 0
.............................................................................................TTTGCACTTGAGACGGCCGAA.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGATACGGCCGA..................................................... 21 1 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACAGCCGAAA................................................... 23 2 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGATATT................................................. 25 3 1 2.00 2 0 0 2 0
............................................................................................TATTGCACTTGAGACGGCCGTTAT.................................................. 24 3 1 2.00 2 0 0 1 1
............................................................................................TATTGCTCTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 1 1 0 0
......................................................TGGTTCGTCACAAGGGCAATTCTAAA...................................................................................... 26 2 1 2.00 2 0 2 0 0
............................................................................................TACTGCACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 2 0 0 0
............................................................................................TATAGCACTTGAGACGGCCGAA.................................................... 22 1 1 2.00 2 1 0 0 1
............................................................................................TATTGCACTTGATACGGCCGAAAA.................................................. 24 3 1 2.00 2 1 0 0 1
............................................................................................TATTGCACTTGAGACGGCCGTTA................................................... 23 3 1 2.00 2 0 0 2 0
............................................................................................CATTGCACTTGAGACGGCCGAAA................................................... 23 2 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGACGGCCGTTC................................................... 23 3 1 2.00 2 1 0 1 0
...........................................................................................TTATTGCACTTGAGACGGCCGAAA................................................... 24 2 1 2.00 2 2 0 0 0
......................................................TGGTTCGTCACAATGGCAATTCT......................................................................................... 23 1 1 2.00 2 2 0 0 0
............................................................................................GATTGCACTTGAGACGGCCGAAA................................................... 23 2 1 2.00 2 1 1 0 0
............................................................................................TATTGCACTTGAGGCGGCCGAAA................................................... 23 2 1 2.00 2 0 2 0 0
.............................................................................................ATTGCACTTGAGACGGCCGATA................................................... 22 2 1 2.00 2 0 0 2 0
.............................................................................................ATTGCACTTGAGACGGCCGGA.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACAGCCG...................................................... 20 1 1 2.00 2 0 2 0 0
............................................................................................TATTGCGCTTGAGACGGCCGAAAA.................................................. 24 3 1 2.00 2 0 2 0 0
.............................................................................................ATTGCACTTGAGACGGCCGAG.................................................... 21 1 1 2.00 2 2 0 0 0
............................................................................................TATTGCACTTGAGACGGTCGAAT................................................... 23 1 1 2.00 2 1 1 0 0

Anti-sense strand reads

TGTTAAATTTAAAAATTTAATAATATTTATTACCCTTAATTCAAATTTCGCAAAACCAAGCAGTGTTCCCGTTAAGACGTAAAAATTTGAACATAACGTGAACTCTGCCGGCTTAATGAAATTTTTCTTAGTAGTAACTCGTTTCATTAATCAAAAAAAAGGAACG

**************************************...(((((((...((((((.((((.((((.(((((...(((..........)))))))).)))).))))))))))...)))))))....*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_1:14025713-14025878 - dse-mir-312 Known_mirbase ACAATTT------A-----------------AATTTTTAAATTATTATAAATAA----TGGGAATTAAGT---------TTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCATT-GAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTTTTT------------------------------TCCTTGC----------
droSim2 2r:17040978-17041142 - dsi-mir-312 Known_mirbase ACAATTT------A-----------------AATTTTTAAATTATTATAAATAA----TGTGAATTAAGT---------TTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCATT-GAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTT-TT------------------------------TCCTTGC----------
dm3 chr2R:16471498-16471673 - dme-mir-312 Known_mirbase ACAATTA------G-----------------CATTTTTAAATTATTAGAA---A----TGTGAATTAAGT---------TTGAAGCGATTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TTAACTAGTATTGCACTTGAGACGGCCTGATTACTTTAAAA-CGAATCATTTTATGAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTTGTT------------------GTGTTTTTAAACTCCTTGC----------
droEre2 scaffold_4845:10618122-10618274 - der-mir-312-1 Known_mirbase AAAATGA------C-----------------CATATTTATATAATT---GATAA----TGTGAATTAAGT---------TTGAAGCGCTTCGGTTCGTACCAGG-AGCAATTCTGCATT----TT--TAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CAAAACATTTTAA--A---TAAA---------------AACTA-----------------------------------------------------------------------------------------------A------------------------------TACTAGT----------
droYak3 2R:12724647-12724801 + dya-mir-312 Known_mirbase ACAATTA------C-----------------CATATTTATATTATTATAAATAAAGT-TACAAATTGCGT---------TTGAAGCGCTTCGGTTCGTCCCAGG-AGCAATTCTGCACT----ATT-AAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CGAATCATTTAA---AC----------AACGCA-T--------------------------------------------------------------------------------------TAAAA------------------------------------------------------------
droEug1 scf7180000409474:1490019-1490215 + ACGGCTT----AAGTGA-------------------------------------AAT-TTAAAATAAAAT---------TTCTAGTATTTCGGTTCGCCTTTTG-TGCAATTTTAGAGT----CA----ATAGAAAATTGCACTTCAGACGGCCGGATGACTTGAAATACAAAACATCTTA---A---A------------------ATCTA---------GAAAA---------------------------------------------------------CTAAGTGTTAATTTTTTGTT-AATAG-----TTGTA--GTTTTCGGCTTATAAAGTTCCAGCAGAATAAATA
droBia1 scf7180000302291:2816200-2816428 + CAGC-GG----AGGTGA-----------------------------------------TATAGGC-ATAT---------TTTTGGCGTTTCGGTCCGTCCCAGG-AGCAATCCTGTATT----T---CCGACTAGAATTGCACTTGAGACGGCCGGAGTGCTTGAAAA-CAAGGAA--------------------AGTGCA-TAGAAACTAACTTAAAACTAG--CAG--------------TCGACCAGCTTTATTTTGCAGGCCGAGGTGGGTGGCAATGCGAT------GC-------TTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAA-CTCGAGC----------
droTak1 scf7180000415401:99888-100090 - ACAGTGT----AA-------------------AAAT----------------TGTGTGTGTAAAC-ATAT---------TTCTGGTGTTCCGGTCCGTCTCAGG-CGCAATTCTGAATT----T---TCACCTAGTATTGCACTTGAGACGGCCGGAATACTTTAAATACGAAACATAAA-A--A---TGAA-----------------------------AATAA--TAG----------TGAAACTTTGCTGTAATTTACATGTCGCGGGCGGTGACAATGCGAGTTAT--GT---------TTATTACGTAT---------------------------TGC----------
droEle1 scf7180000491201:736182-736355 - AGTGA------AAA--CATTTAAATTTTATC---------------------------TGTGTAC-TAAT---------TTCTGGTGTTTCGGTACGTCTATGG-GGCAATTCTGCGTT----TT--CTGGTTAGCATTGCACTTGAGACGGCCGCAACACTTTGGAATAAAAACATTTA-A--G---ACAGTTTA-------A--------------GAAAAT--ATT--------------TAATTCGGCATTAATTTATATGT----------------------------------------------------------------------------CGC----------
droRho1 scf7180000780104:82204-82447 - AGTGC------AAA--TATTTAAATATAATC---------------------------TGCGAAC-AAAT---------TTCTGGTGTTTCGGCTCGTCTCAAA-AGCAATTCTTCGTT----TTTCTTGGCTAGCATTGCACTTGAGACGGCCGCAATACTTTGGATTTAAAACATTTA-A--G---CAAGTTTA-------T--------------TGAAAA--AGT--------------TATTTTTGCATTAATTTATATGTCGCTGGCGGTGACAATACAAGTTGTTGGT-------T-TTTTTTCGTATTGCACTGGCCCCGGCTTATAAAATCCTGGC----------
droFic1 scf7180000454039:1776183-1776394 - AAGTTTG---CAAG----TTTTAATTAAATC----------------------G----GGAAAAC-CAAT---------TTCGAGTGTTTCGGT-CGTCTTGGGTGGCAATACTAAATTAACTTT--ATGGCTAGCATTGCACTTGAGACGGCCGAAATGCTTTAAATTTATAACATCTA-A--G---CAAG---------------ACCCA-------------------------------------------AAATTCTGAGCCGTGGACAGTGATAATGCGATTT-------------T-TATTTGCGTATTGCACTGGTCCCGGCCTATAA-------------------
droKik1 scf7180000302471:941706-941938 - AGTCTTCTTGAAAG--AAGATAAACAAA----------------------------------AGCTCCGG---------CCGTAAAGGTCTGTGCTGTTTGAGG-TGCAAATCTGTGGT----TA--ATAGCCAGAATTGCACTTGAAACGGCCAGATCAAGGCGGCC-CAAAACATCGCA---A---CAAA---------------AATTT------A--GACAA--TTGTTCGGGTACTTGGAATTTGCCTTTGATCTGTACGTCGGTGGGGGTGGCAATGGGCATTAC-----------C-AACGTACTTATTGCACTCGCCC----------------CGG----------
droAna3 scaffold_13266:4132626-4132786 + dan-mir-312 Known_mirbase TCAATTT--AATAA--AAAATAAATAAT--------------AGTGTT----------TGTGCTTTTTAAAAAAAACATCTACAATTTTCCGGTGCGTCTCTAG-TGCAACTCTTGGTT----TTT-TATACAAGTATTGCACTTGAGACGGCCGAAATATAGTGGAT-CTAAGCGGCTAT-AACC----------GAAAA--------------------------------------------------------------------------------------------GT----------------------------------------------TTTC----------
droBip1 scf7180000396427:2575348-2575505 + TTAAAAA------A-----------------AAAATAATAATTGCAAGTGTGTGTGT-TTGGATTTATGT---------CTACAATTTTCGGGGTCATCTCCAG-TGCAAATCTTGGTT----TTT-CCAACAAGAATTGCACTCGAGACGGCCAGAATATTGTGGAT-CTATGCAGCTAC-AAGCCG--------AAAGTGT---------------------------------------------------------------------------------------TTA---------------------------------------------------G----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
ACAATTT------A-----------------AATTTTTAAATTATTATAAATAA----TGGGAATTAAGT---------TTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCATT-GAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTTTTT------------------------------TCCTTGC----------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................TATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................2116003.00600335153211963204
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................2215112.0051123805200960147
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................2312950.0029501767691006108
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................241626.006262532232130
..........................................................................................TGGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................211602.006024065112916
..........................................................................................TGGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................231470.004702765011430
.......................................................................................................................................TATTGCACTTGAGACGGCCG........................................................................................................................................................................................................201466.004661844421919
..........................................................................................TGGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................221326.003261374812219
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................231292.0029212582814
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT......................................................................................................................................................................................................221251.0025198687411
........................................................................................................................................ATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................211238.00238228280
........................................................................................................................................ATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................201195.00195182292
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................221140.00140128183
..........................................................................................TGGTTCGTCACAAG-GGCAAT....................................................................................................................................................................................................................................................201105.001052825502
.......................................................................................................................................TATTGCACTTGAGACGGCCGATA.....................................................................................................................................................................................................23175.00751334226
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC.....................................................................................................................................................................................................23159.005944492
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGCA..............................................................................................................................................................................................................................................26144.004422985
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG.....................................................................................................................................................................................................23144.0044262160
.......................................................................................................................................TATTGCACTTGAGACGGCCGT.......................................................................................................................................................................................................21137.0037414163
.......................................................................................................................................TATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................21131.003128030
.......................................................................................................................................TATTGCACTTGAGACGGCCGATAA....................................................................................................................................................................................................24130.003044220
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC......................................................................................................................................................................................................22130.003019290
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................22129.002921431
..........................................................................................TGGTTCGTCACAAG-GGCAATTCA.................................................................................................................................................................................................................................................23124.0024101112
..........................................................................................TGGTTCGTCACAAG-GGCAA.....................................................................................................................................................................................................................................................19123.002331091
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................19123.002363113
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTA................................................................................................................................................................................................................................................24122.002220110
.........................................................................................................................................TTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................19122.002214080
...........................................................................................GGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................22121.002121000
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................18121.002110164
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................23120.002018200
...........................................................................................GGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................20120.002020000
..........................................................................................TGGTTCGTCACAAG-GGCAATTT..................................................................................................................................................................................................................................................22118.001801440
..........................................................................................TGGTTCGTCACAAG-GGCAATTA..................................................................................................................................................................................................................................................22113.00137330
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT......................................................................................................................................................................................................22113.00132452
........................................................................................................................................ATTGCACTTGAGACGGCCG........................................................................................................................................................................................................19113.001312010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG......................................................................................................................................................................................................22112.00124251
..........................................................................................TGGTTCGTCACAAG-GGCAATTAAA................................................................................................................................................................................................................................................24112.00126141
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATT....................................................................................................................................................................................................24112.00122901
.........................................................................................................................................TTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................20111.00119020
.......................................................................................................................................TATTGCACTTGAGACGGCCGACA.....................................................................................................................................................................................................23111.00114061
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTG................................................................................................................................................................................................................................................24110.00105230
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGC...............................................................................................................................................................................................................................................2519.0095040
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................2118.0085030
......................................................................................................................................GTATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................2318.0088000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCC.................................................................................................................................................................................................................................................2318.0084130
..........................................................................................TGGTTCGTCACAAG-GGCAATA...................................................................................................................................................................................................................................................2116.0063201
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA....................................................................................................................................................................................................2416.0063120
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATTT...................................................................................................................................................................................................2516.0061500
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA....................................................................................................................................................................................................2416.0063300
......................................................................................................................................GTATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................2216.0066000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT...................................................................................................................................................................................................2516.0061230
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG....................................................................................................................................................................................................2415.0053020
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC....................................................................................................................................................................................................2415.0054001
.......................................................................................................................................TATTGCACTTGAGACGGCCGC.......................................................................................................................................................................................................2114.0040130
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAA.............................................................................................................................................................................................................................................2714.0043010
..........................................................................................TGGTTCGTCACAAG-GGCA......................................................................................................................................................................................................................................................1814.0041120
..........................................................................................TGGTTCGTCACAAG-GGCAATTAA.................................................................................................................................................................................................................................................2314.0040040
........................................................................................................................................ATTGCACTTGAGACGGCCGAAC.....................................................................................................................................................................................................2214.0044000
.........................................................................................................................................TTGCACTTGAGACGGCCG........................................................................................................................................................................................................1814.0041030
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC...................................................................................................................................................................................................2513.0032010
.......................................................................................................................................TATTGCACTTGAGACGGCCGATC.....................................................................................................................................................................................................2313.0032100
............................................................................................GTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................1913.0033000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................2113.0031020
...........................................................................................GGTTCGTCACAAG-GGCAATTCTA................................................................................................................................................................................................................................................2313.0033000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCCA................................................................................................................................................................................................................................................2413.0033000
...........................................................................................GGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................2113.0033000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATATA..................................................................................................................................................................................................2613.0030300
......................................................................................................................................GTATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................2413.0033000
........................................................................................................................................ATTGCACTTGAGACGGCC.........................................................................................................................................................................................................1812.0022000
............................................................................................GTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................2112.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATG.....................................................................................................................................................................................................2312.0020200
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATTA...................................................................................................................................................................................................2512.0021100
..........................................................................................TGGTTCGTCACAAG-GGCAATTCAAA...............................................................................................................................................................................................................................................2512.0020020
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAG...................................................................................................................................................................................................2512.0021010
..........................................................................................TGGTTCGTCACAAG-GGCAATG...................................................................................................................................................................................................................................................2112.0022000
.........................................................................................TTGGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................2212.0022000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAG.....................................................................................................................................................................................................2212.0022000
...........................................................................................................................................GCACTTGAGACGGCCGAA......................................................................................................................................................................................................1812.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAACT...................................................................................................................................................................................................2512.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT......................................................................................................................................................................................................2212.0022000
..........................................................................................TGGTTCGTCACAAG-GGCAAAA...................................................................................................................................................................................................................................................2112.0020200
..........................................................................................TGGTTCGTCACAAG-GGCAATTCAA................................................................................................................................................................................................................................................2412.0022000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTT................................................................................................................................................................................................................................................2412.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACAA....................................................................................................................................................................................................2412.0020020
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................2212.0022000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTTA.....................................................................................................................................................................................................2312.0020200
.......................................................................................................................................TATTGCACTTGAGACGGCCGTTC.....................................................................................................................................................................................................2312.0021100
........................................................................................................................................ATTGCACTTGAGACGGCCGATA.....................................................................................................................................................................................................2212.0020200
........................................................................................................................................ATTGCACTTGAGACGGCCGAG......................................................................................................................................................................................................2112.0022000
droSim2
ACAATTT------A-----------------AATTTTTAAATTATTATAAATAA----TGTGAATTAAGT---------TTAAAGCGTTTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TAAACTTGTATTGCACTTGAGACGGCCGAATTACTTTAAAA-AGAATCATCATT-GAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTT-TT------------------------------TCCTTGC----------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................TATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................211124803.0012480301166577401262208182302132942314797598145310924750225
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................22189294.00892942342763301871251852478715971140486128539824979111
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................23184398.008439808303625009108857630216275806241567907267000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................24136006.0036006005425600344133751575910778192715722039000
..........................................................................................TGGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................21111357.0011357013601912445399188918711111396474688128
.......................................................................................................................................TATTGCACTTGAGACGGCCG........................................................................................................................................................................................................2018251.008251755914937714042953338087485551901022936211
..........................................................................................TGGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................2317910.00791000036188318231716181814294555066325001
..........................................................................................TGGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................2217132.00713200038106619111882231661960792403137203
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................2312596.002596031315903193368356901803535125001
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT......................................................................................................................................................................................................2211685.0016850543001801983614211402018335000
..........................................................................................TGGTTCGTCACAAG-GGCAAT....................................................................................................................................................................................................................................................2011633.001633010939983232201156237517531005
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC.....................................................................................................................................................................................................2311221.00122102346002332593522375771321000
........................................................................................................................................ATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................2111218.001218002291002772592362361417417000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................2211192.0011920004700141165304307209478000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATA.....................................................................................................................................................................................................2311064.0010640101001171324093212410940000
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................191882.008820163111189212447485471217000
..........................................................................................TGGTTCGTCACAAG-GGCAA.....................................................................................................................................................................................................................................................191868.00868010134112141268774242294000
........................................................................................................................................ATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................201812.008120044721114124201193764541000
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................181710.007100340145221193427453101000
...........................................................................................................................................GCACTTGAGACGGCCGA.......................................................................................................................................................................................................171545.005450000001213538000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTT..................................................................................................................................................................................................................................................221478.004780000000101301471001
...........................................................................................................................................GCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................191451.004510000000163441000000
...........................................................................................................................................GCACTTGAGACGGCCGAA......................................................................................................................................................................................................181450.004500000001012446000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTA................................................................................................................................................................................................................................................241445.00445000700333616314752061000
.......................................................................................................................................TATTGCACTTGAGACG............................................................................................................................................................................................................161413.004130000003479390000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG.....................................................................................................................................................................................................231411.00411006300434614210751742000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................231381.00381000130042371459350010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGT.......................................................................................................................................................................................................211343.003430720001615302320173210000
..........................................................................................TGGTTCGTCACAAG-GGC.......................................................................................................................................................................................................................................................171325.003250000000232318000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCA.................................................................................................................................................................................................................................................231304.00304000300251212288343134000
..........................................................................................TGGTTCGTCACAAG-GGCA......................................................................................................................................................................................................................................................181303.003030001172100512960115000
..........................................................................................TGGTTCGTCACAAG-GGCAATTA..................................................................................................................................................................................................................................................221274.0027400030042232427429158000
..........................................................................................TGGTTCGTCACAAG-G.........................................................................................................................................................................................................................................................151270.00270000000302653188000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................211237.0023731411520024251117121202000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT......................................................................................................................................................................................................221191.001910210005667310160000
.............................................................................................................................................ACTTGAGACGGCCGAAA.....................................................................................................................................................................................................171177.001770000000140172000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTAAA................................................................................................................................................................................................................................................241176.0017600040092856410110000
.......................................................................................................................................TATTGCACTTGAGACGG...........................................................................................................................................................................................................171170.001700000001925161198001000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC......................................................................................................................................................................................................221163.00163351100016183339184016000
.............................................................................................................................................ACTTGAGACGGCCGAA......................................................................................................................................................................................................161161.001610000001200158000000
..........................................................................................TGGTTCGTCACAAG-GGCAATA...................................................................................................................................................................................................................................................211149.0014900000022126904114000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA....................................................................................................................................................................................................241149.0014900100024135428511112000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................221148.001480004102320402228046000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC....................................................................................................................................................................................................241146.001460031001716553123000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCAA................................................................................................................................................................................................................................................241140.00140000110032514618027000
.......................................................................................................................................TATTGCACTTGAGACGGCCGC.......................................................................................................................................................................................................211137.0013700100028445641615000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGCA..............................................................................................................................................................................................................................................261114.0011400030029288143110000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA....................................................................................................................................................................................................241103.00103000000312372122521000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATAA....................................................................................................................................................................................................241102.001020000005427487515000
.............................................................................................................................................ACTTGAGACGGCCGA.......................................................................................................................................................................................................15194.00940000002331076000000
..........................................................................................TGGTTCGTCACAAG-GG........................................................................................................................................................................................................................................................16191.0091000000001288000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACA.....................................................................................................................................................................................................23185.008500000054212871118000
..........................................................................................TGGTTCGTCACAAG-GGCAATTAA.................................................................................................................................................................................................................................................23180.008000010023332410223000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG......................................................................................................................................................................................................22175.0075005000811171021300000
..............................................................................................................................................CTTGAGACGGCCGAA......................................................................................................................................................................................................15171.0071000000202166000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCAAA...............................................................................................................................................................................................................................................25171.00710005000327332001000
.......................................................................................................................................TATTGCACTTGAGACGGCCT........................................................................................................................................................................................................20170.00700212000223340033000
...........................................................................................................................................GCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................20267.501350000000000135000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATT....................................................................................................................................................................................................24167.0067000020101410840118000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTAA...............................................................................................................................................................................................................................................25161.006100000045162610000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTG................................................................................................................................................................................................................................................24161.006100025091151315001000
.........................................................................................................................................TTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................20159.00590005009185220000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGC...............................................................................................................................................................................................................................................25157.0057000020758129500000
.......................................................................................................................................TATTGCACTTGAGACGGCCTG.......................................................................................................................................................................................................21154.005400000014241114000000
.........................................................................................................................................TTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................19150.005000010051271015000000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................21146.00460002005316812000000
..........................................................................................................................................TGCACTTGAGACGGCCGA.......................................................................................................................................................................................................18146.0046000000134038000000
.......................................................................................................................................TATTGCACTTGAGACGGCCA........................................................................................................................................................................................................20141.00410130003211281010000
...........................................................................................................................................GCACTTGAGACGGCCG........................................................................................................................................................................................................16141.0041000000000041000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAGA....................................................................................................................................................................................................24141.0041000000751397000000
...........................................................................................GGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................20140.0040000200007410224000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAC.....................................................................................................................................................................................................22140.00400001001013483001000
..............................................................................................................................................CTTGAGACGGCCGAAA.....................................................................................................................................................................................................16337.331120000000024106000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG....................................................................................................................................................................................................24136.0036000000611439210000
........................................................................................................................................ATTGCACTTGAGACGGCCG........................................................................................................................................................................................................19135.0035021351030260111000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAGA.....................................................................................................................................................................................................23135.0035000000227519000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC...................................................................................................................................................................................................25133.003300010045687110000
..........................................................................................................................................TGCACTTGAGACGGCCGAA......................................................................................................................................................................................................19132.0032000010232222000000
..........................................................................................TGGTTCGTCACAAG-GGCAT.....................................................................................................................................................................................................................................................19132.0032000000000000032000
........................................................................................................................................ATTGCACTTGAGACGGCC.........................................................................................................................................................................................................18131.0031000020001226000000
..........................................................................................................................................TGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................20131.0031000000004324000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT...................................................................................................................................................................................................25130.0030002100321444000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAAA----........................................................................................................................................................................................................................................28129.00290000001412300000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGCAA.............................................................................................................................................................................................................................................27125.0025000000109024000000
............................................................................................................................................CACTTGAGACGGCCGA.......................................................................................................................................................................................................16125.002500000045646000000
.......................................................................................................................................TATTGCACTTGAGAC.............................................................................................................................................................................................................15223.50470000001341326000000
...........................................................................................GGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................22123.002300050003850011000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCC.................................................................................................................................................................................................................................................23123.0023000000111017201000
........................................................................................................................................ATTGCACTTGAGACGGC..........................................................................................................................................................................................................17122.0022000000000121000000
..........................................................................................TGGTTCGTCACAAG-GGCAAA....................................................................................................................................................................................................................................................20122.0022000000002120215000
..........................................................................................TGGTTCGTCACAAG-GGCAATAA..................................................................................................................................................................................................................................................22119.0019000000004220110000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................22118.001800020032722000000
..............................................................................................TCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................18118.0018000000000018000000
...........................................................................................GGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................21118.0018000330000020010000
.......................................................................................................................................TATTGCACTTGAGACGGCGA........................................................................................................................................................................................................20115.001500000033621000000
............................................................................................................................................CACTTGAGACGGCCGAAA.....................................................................................................................................................................................................18115.001500000012309000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGACAA....................................................................................................................................................................................................24115.001500000000651210000
..........................................................................................................................................TGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................21114.0014000000112010000000
dm3
ACAATTA------G-----------------CATTTTTAAATTATTAGAA---A----TGTGAATTAAGT---------TTGAAGCGATTTGGTTCGTCACAAG-GGCAATTCTGCATT----TT--TTAACTAGTATTGCACTTGAGACGGCCTGATTACTTTAAAA-CGAATCATTTTATGAGC----------AAAGTAA---------------------------------------------------------------------------------------TTAGT-------TTTGTT------------------GTGTTTTTAAACTCCTTGC----------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................TATTGCACTTGAGACGGCCTGA......................................................................................................................................................................................................221823125.0082312570714301582511311603800000200109622155716000134031314014533853295533511551411339526142008306150040457264063430234264031597512920003744532030000000000000000023111323475024502143390333542721438850141913164305464553143255461545540812568714124501100000120628101410234380145120462262650064929496232861944539133714558173137232713840645127060000027130531219013002219143112442010008218203834193519809981992442411832012025442295235638997235123501541188481248342215562425013465180321492680761302916723850013011400622717181003201232012264116610622430120218174102532312021548339027187105457018789632152856710041251966682102164052525418744492201784112553302951562231611473124260624491231311912428248712039685479176375136175693605366275687151647837
.......................................................................................................................................TATTGCACTTGAGACGGCCTG.......................................................................................................................................................................................................211229467.00229467000134395715501100000000178407692605022000000022708634898615036521099336304402446691196369168341174831236000243080000000000000000000001568159215254917023133116818149371211323662051121058441081891943680000000100102210041528111123162841872620223614461014124918131467815100102910412073623000000000602402001500000000000048501063128786952024735058513510000046510626910952735420001114140387232341001888114013811216862832166650011000031031901990121225006517900131400020105430257594103321807138911083132091022235861179310316293000127472518697142843057607167581678315211912152170315108137851395255012794611518241180647324224636387202926333309642
..........................................................................................TGGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................23172068.007206800010519431671130000000055404533000008241058410716371102212492431103511994115228261495186710001200000000000000000011000424173355239351000371011131603332713340046347813389313919310800000000001000124541374621119117506446541723207556479478206503515176682400000000000012020004920000401000112111036828324615194941375454101062973431620125102000208011041342789094771434162011487091044965000300008844039000015102308105500000205007470002131510365226422718334283499001170000111767129172465229010471696586240165666300404666127500114845662141573190040610051311689116631911104
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAA.....................................................................................................................................................................................................23170905.0070905000025285131206000000007415562380200000000791771142967824316202771844430219265190172188303600000000000000000000000000000637187522465696000055028919632204118300950793403926411528701000000001000020026801823580826748035613881472692391611032515017230612100000000000230600160100010000005525301317121902169402387501201306300758201300023219864743089962263226603331232929434338110020571400725604200002400190300030000000200332100125833211282382912524183132346460041000000200627770174388146981631861521002554120015110216000744200208152762314282203109
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAAA....................................................................................................................................................................................................24159402.00594020000032430640100000000561631001000000000011124584388902141440273131293617229178101711715100000000000000000000000000007122443522226590001211161216690020120000365304715192153178000000000001100000303577250681058120946825427317954298196291391011687000000000000440300130110000000000268499921543317927619332010583100252330800013233497143273227241661189132021366353570041020033390200000020015010004000000000021000140035529362949114039214441588002000000101822000403336165361416101400328111941990000400100000012289918174559100100
.......................................................................................................................................TATTGCACTTGAGACGGCCT........................................................................................................................................................................................................20130804.00308040000107173305200000001973212194000000040027031345412216485331431455010182772839614696360004210000000000000000000000128259295165002033059226300078260218361627704111700000000000111003200002121555350244526915411626283100278187179770000000000000000005000000100000235618854758500216214683000004271314764500011327416310274525467124441252217300040000283112400000200016016004100000001640951000079418859182732655214746315210042010000824271520452554513628144344414802121148558011058001501220130459033688126107010
..........................................................................................TGGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................22128166.0028166000002618310300000000333916343000020100378366135521990664213751480871051249024000516000000000000000000100020528403517301011007503120125282510223851348301007000000000000100106711778367342471912102771321972411698415871431991040000000000010000001200000600000223414555416537102182253613010000117424399113718000935396173454136742002181781221341650110000016190900000100904001200000002106710001291048274164717013283052153003800200055428983249233055319122964274110154017431811040107205441330018426196330152204500114
.......................................................................................................................................TATTGCACTTGAGACGGCCTGT......................................................................................................................................................................................................22125331.002533100000015000000000000850895200000000001149664851422060766020541576173581161046500000000000000000000000000005276744531002061721990114210002103101540270100001000001000000000205737929220296811011259976237765994400000000100100100000000010000001584105865806052472273326400000679421121000004514179400498612415466125591291003000033150160010111060270020000001010003862004451048671212752816694111562003800000046191632151703093868933616661350034695138700131240026017212163411002362071451201110
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAT.....................................................................................................................................................................................................2319478.00947800000252310400000000112410230000000000327211317418273527735113226213933120006477240000000000000000010000471351304500100003601111007402001380516190017000000000000000000041250158810958192646384312124343292600000000000100000040000000000000247471241100070510710000002422002000000492031957152921882382021551522314001600069060000010030100200000000000160000129371286774220711267101600170000001195121267133972261213800421911681102300502100341015563325300112
...........................................................................................GGTTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................2218085.0080850000000000000000000000000000000000000100000000000010000000000000000000000000000002006100000000000000000000000001000000000000000000000817040000000311000000000000000000000000000000000000000001102001000000000100000000010130461426731416498391591135800000000000000000000000000000000000000000032221411082200000000020000000030000004101000100000000001001000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGC......................................................................................................................................................................................................2215031.0050310000000200000000000015141340000000000312501623181511721512131615852721920910450000000000000000000000000000905251300000003140000010000020002001101000000000210000163380436464649121920980273254430000000000000010000000000000000010642000013700000912000000000694116710137751700000000610310201100102000000000002008100036256362084839273515005000000115210002843244811923120084162510070080000100121078000000
..........................................................................................TGGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................2114034.00403400000113201300000000810482200010000016713255216831531291576200010000000000000000000000004173947001020066291600120200135213117105300000000000020108535114045346309820242625115102826220000000000001000000101000000000045271902735003531112200010112916053000006163481641942551113435274300010000711020000030000300010000000100900001279251192106141200060000006533101543631761110168001271672060101410402100201114372622100000
........................................................................................................................................ATTGCACTTGAGACGGCCTGA......................................................................................................................................................................................................2113611.00361100000000000000000000211700000000000415370232152365461000131160000000000000000000000954121200100004040000200000200111003000000000000000000411160112914114172115167300000000000000000000000000000000011310004221010004400000000020221182764619352433380000000000010000010010000100000000000160000886659558958444635810050000002210100126417730200004235500001700352000000281031000015
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTA................................................................................................................................................................................................................................................2413494.00349400000116100000000000311200000000000324948011432111159851100000000000000000000000000000502025570001000011181000180000108052501120000000000000000001500502564664391228432170101426600000000000000000000000000000000923182310264327000003677223100000141360221240293330436200000000020100000000000000000000000000000019150515121251510800000000084110051254973113012001703085390001002000000021602540000000
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................1912382.0023820000000000000000000072747300000000001581165277611853360131181110700000000000000000000000000002130200000000105000000000000111000000000000000001081200002215433610750181719226641430000000000000000000000000000000065277330004903122000004730314080001452731681112010110000000470200000200305001000000003001700003456431042677451230031000004465001031373059326117008139460003001600003081021413100003
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................1812029.0020290000000000000000000013432120000000000012910101635128169411472722195000241000000000000000000000010303000000000220000110000100110010000000000000000480000039331728112515161492974030000000000000000000000000000000023346342000502531000007980200000059773364000000000000000096020000000000200000000000210140110305920492162431160030000005672102217313550154300745443100600700001059392414201000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGG......................................................................................................................................................................................................2211691.001691000000112100000000000111000000000002151121515930171023029147160000000000000000000000000000403161000000200140000001001150731200700000000000000000002105001186643444018550000000000000000000000000000000081120000201100000330000000002100101001041270000000032016000000002000000000000000041000396541813517550223002000000490020014401161001100402823000400920000002822000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAC.....................................................................................................................................................................................................2311449.001449000000001000000000001512000000000013103410191262704209711400000000000000000000000000001207680000000102100000000012201100301000000000000000022001012021173835213545000000000000000000000000000000001176300001400000063000000000102242301328423126213500001040002020000010000000000000000000300002277411193712538129007000000322000018194029200200441429000000500000013444000000
..........................................................................................TGGTTCGTCACAAG-GGCAAT....................................................................................................................................................................................................................................................2011405.00140500000002000300000000012460000000000491002200220220002511000000000000000000000000000060101280000300130215002104001000010220120000000000000100410000000163121523636100550000000000700000001000000000000050386360025042900000340000400009231976395140566001000002100000000001010000000000000000000013119016519001000000112100100498311900162522000300600003174531000000
...........................................................................................GGTTCGTCACAAG-GGCAATTC..................................................................................................................................................................................................................................................2111273.0012730000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000001100000301010000010000002000000000000000000000000000000000000000000000000000000000002000154983945230215205233000000000000000000000000000000000000000000371317150000000000000000013000000240000000100000000100000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTT.......................................................................................................................................................................................................2111123.00112300000000000000000000361037010000000001541422394010122241208000000000000000000000000000081100100000003014000000000000022007000000000000010000000000334116281116236232220000000000000000000000000000000015233100011012100000480010000002331313524340120001000020027000010000010000000000000031000119129113913001000000470000810532081622471000164300010000000002122515000000
........................................................................................................................................ATTGCACTTGAGACGGCCTGAA.....................................................................................................................................................................................................221979.009790000000200000000000001000000000000000002052102021000000000000000000000000000000005003100000000011000000000000102001000000000000000000000000033540032002000000000000000000000000000000000001230000022000000000000000003612241032242519282000010000000000001000000000000000000007000013120261511211211149006000000701000516320001000121490005001100000000322000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCA.................................................................................................................................................................................................................................................231929.009290000003410020000000034120000000000020400022002134332100000000000000000000000000002817162226000000020611000000001401372028000000000000000000140000114161325821042130930000000000000000000000000000000056377400152000009110020200007431212225510000000003000000000000000000000000000000000414732617021000000000386100149136900000044571150001000100000141058000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAG.....................................................................................................................................................................................................231914.009140000000000000000000000000000000000365644043313131048810000000000000000000000000000025420000000101000000000001012100400000000000000000001001018531645100302251000000000000000000000000000000004587000307000000970000010004713107112010911190000000030010000000010100000000000000100008241038102913490020000003931201112325431120006144600007001400000005211514000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGATA....................................................................................................................................................................................................241842.008420000000210000000000021000000000000153626151205071010620000000000000000000000000000502215000001020400000000007300110010000000000000000000000001202915145513020110000000000001000001000000000000022410400020200000048000000000432014917111012132000001100100000000000000000000000000000000010341536185915450000000002000000519633100000672337000100100000006833000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGATC....................................................................................................................................................................................................241755.007550000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000100000000000000000000000000000004000001000000000000000000000000000000000000001000000000000000000000000000100101121020000615107000000000000000000000000000000000000010004040000000002000001010000000101000000000000000000000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTA.......................................................................................................................................................................................................211721.007210000002400010000000001480000000000213646082003031460100000000000000000000000000001360210000000000110000010000101110010000000000000000000000001261625355116312351000000000000000000000000000000006105100020300000004000000000202526462339000001001101000000002010000000000010000000175717411151314000000000200000312724181520005313210000001200000061313000000
.........................................................................................................................................TTGCACTTGAGACGGCCTGA......................................................................................................................................................................................................201652.006520000000000000000000013000000000000020003020000012002000010000000000000000000000001509101000000001071000000000100401103000000000000000000000040011000212001140000000000000000000000000000000000401000001800000220000000004102135302312614200000000000000000000010000000000000000000001519942724147400100000020000018150000001113000100310000000011000000
...........................................................................................................................................GCACTTGAGACGGCCTGA......................................................................................................................................................................................................181651.006510000000000000000000010140000000000000000220201010221040000101000000000000000000000000000000000000000000000000000000000010000000000000000000201564005311021000000000000000000000000000000000038000000000000005200000000086216010100000000000000010000000000000000000000000000002516916646571910300000000090000098020000002336000000100000000100000002
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAAC....................................................................................................................................................................................................241651.00651000000000000000000001020000000000003020312560040015344000000000000000000000000000001123300000001010000000000010002001000000000000000000021000051466014120202200000000000000000000000000000002251000000000000046000000000400017129122628202900001042900110000000000100000000000000000000010285175184130000000001610000132171000000018413000000000000002311000000
..........................................................................................TGGTTCGTCACAAG-GGCAA.....................................................................................................................................................................................................................................................191613.00613000000000000000000000101800000000004000000211100000211000100000000000000000000000040013000010000090002010000000401010000000000000010020010012230050110000000000000000002000000010000000000035114812003006800000000201420000068665051100230000000001000000010010000000000000100300000506291400000000040100100154298009580001001920004091120000100
.......................................................................................................................................TATTGCACTTGAGACGGCCTGTA.....................................................................................................................................................................................................231578.0057800000000000000000000010200000000000221300011042885133000000000000000000000000000043187800000000032000001000100102001200000000000000100001001017112412002001730000000000000000000000000000000038232000015026000000530000000002122104111318000000000002000000001000000000000000000000830422741530000000000100300044316001100444110000001000000101014000000
........................................................................................................................................ATTGCACTTGAGACGGCCTGAAA....................................................................................................................................................................................................231551.0055100000001000000000000000000000000000100000000010021101000000000000000000000000000010024000000000000000000000001000000000000000000000000100000437021011000000000000000000000000000000000000011000000203000003100000000012131022541317819000000000000000000000000000000000000020000139015737875470010000002000000113101000008126000300000000000111000000
........................................................................................................................................ATTGCACTTGAGACGGCCTG.......................................................................................................................................................................................................201549.00549000000000000000000001013000000000072000001011002013000000100000000000000000000000600230000100101000000000001000000000000000000000000001005041030030620210030000000000000000000000000000000020330000002000000100110000015321603121430000000000000000000000000000000000000000002188363851443000000000800001115430030000101313010100600000002945000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGATT....................................................................................................................................................................................................241547.00547000000000000000000000000000000000001022102020000001100008714579000000000000000000000000042000000010010100200000000021000000000000000000000000002057002001202000000000000000000000000000000000032011000081190000001000000000011011368937020000000000000000000000000000000000000000006534332160000000002000001121100000703000100100001020100000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAAG....................................................................................................................................................................................................241460.004600000001100000000000010000000000000031202111202001020000000000000000000000000000005013240000000002000000000001000200000000000000000000002100003109012112001310000000000000000000000000000000021300001010000001801010000000001310131216176230000000002000000000000000000000000000000002193117215110000000002000000614620000000292519000000000000006684000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTC.......................................................................................................................................................................................................211448.004480000000000000000000000000000000000020100093100001160000000000000000000000000000000100000000001000000000000000000000000000000000000000000010113743539220634100000000010000000000000000000000000000000000000052000000000001401041040000000000000000000000010000000000000000000929101341881400100000038000024629010193200434000000100000004513000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGTAA....................................................................................................................................................................................................241442.00442000001000000000000000120000000000010012012110101321130000000000000000000000000000160565000000000210000000000100010030000000000000000000100001161401205022000000000000000000000000000000000000282101000303000000950000000000000328951951400000000000000000000000000000000000000000042171411420100000000004100002021100300043412000000000000003418000000
...........................................................................................GGTTCGTCACAAG-GGCAATTCTA................................................................................................................................................................................................................................................231425.0042500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000006116107626183120000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000000000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTT................................................................................................................................................................................................................................................241407.00407000000010000000000000000000000000012110002030203300000000000000000000000000000000115202000010010000000000000000010000000000000000000000200000530010110004200000000000000000000000000000000011014400031150000001000000000000601285971126000000002000000001001000000000000010000000211016012216000000000900002015331131001726330004001110000025633000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGCA.....................................................................................................................................................................................................231405.004050000000100000000000021000000000000025111012121011039191132000000000000000000000000000011132000000000000000000000001010010000000000000000000200000264301400002330000000000001000000000000000000141310001010000001100000000000001102230400000000110100000000100000000000000000000033152253553100000000014000001813213000000101000000000000000000000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGACA....................................................................................................................................................................................................241402.0040200000002000000000000023000000000000102140121202207261120000000000000000000000000000005175000000001000000000000202200010000000000000000000000005188221602001320000000000000000000000000000000010000000100000001100000000000003344335700000000200000000000000000000000000000000054831944531300000000018000001111280000001431000000000000001701000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTAA...............................................................................................................................................................................................................................................251394.003940000000300000000000000000000000000100001200100000100000000000000000000000000000000331281140000000001000000000018010400100000000000000000003100000661162230100000000000000000000000000000000000003204000010000000760000000006000305344570000000000000000000000000000000000000000001702010120000000001500002351019000000163449000000000000011022000000
...........................................................................................GGTTCGTCACAAG-GGCAATT...................................................................................................................................................................................................................................................201392.0039200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001003772161650604491000000000000000000000000000000000000000000000101010000000000000000000000000000000000100000000000000000
........................................................................................................................................ATTGCACTTGAGACGGCCTGAT.....................................................................................................................................................................................................221372.003720000000000000000000001020000000000000000101010010000000040000000000000000000000001004000000001001000100000000011000000000000000000000000000011000010001000000000000000000000000000000000001310000202000000010000000002412311763420000000001000000000000000000000000000300005331773649562002000000100000311260010001503000100101000000000000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCAA................................................................................................................................................................................................................................................241359.003590000001000000000000010000000000000111010021002000100000000000000000000000000000001338017000000000200000000000100110020000000000000000000300000490342410030000000000000000000000000000000000013150001007000002150000000000000141329450000000000000000000000000000000000000000002721001214000000000151000113723000000211955000000000000003807000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCC.................................................................................................................................................................................................................................................231349.003490000000001020000000010000000000000000000001211022112100000000000000000000000000000110000000000000000000000000000000000000000000000000000100040021123301601000000000000000000000000000000000062400002100000041000000001631520103133000000000001000000001000000000000000000000115330115538000000000400100561621000000122722000400200000005731000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGCAA....................................................................................................................................................................................................241298.00298000000000000000000001000000000000000023108900000257401000000000000000000000000000000002000000000000000000000000000010000000000000000000000000108540040100122000000000000100000000000000000001000000000100000030000000000000001201010000000011000000000000000000000000000000006322149341150000000001300000112288000000322000000000000000200000000
..........................................................................................................................................TGCACTTGAGACGGCCTGA......................................................................................................................................................................................................191296.002960000000000000000000012020000000000002100021000003100000000000000000000000000000000012320000000000000000000010000000000000000000000000000000000110112000006000000000000000000000000000000000000000000000000010000000000420111000010000000000000000000000000000000000000000000141056271226460000000000000003400000000321000000000000000000000000
..........................................................................................TGGTTCGTCACAAG-GGCA......................................................................................................................................................................................................................................................181282.002820000000000000000000010060000000000002000001000000101100000000000000000000000000001000100001000001000000000000000000000000000000000034490000050100010310000000000000000000000000000000000000081112000707001000010011000001271818000001000000000000010000000000000000000000110100000113065800000000030100402141100007510001000000001121020000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAAAT...................................................................................................................................................................................................251251.0025100000001000000000000000000000000001103100100000010000000000000000000000000000000000643000000000110000000000001030000000000000000000000000000101200011010000000000000000000000000000000000000410190000110170000005300000000000002321311470000820000000000000000000000000000000000000723112140000000008000010211200000911000000000000001110000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTTT......................................................................................................................................................................................................221160.0016000000000000000000000014170000000000001000010011002000000000000000000000000000000003230100000000024000000000000010001000000000000000000000000024111000210000000000000000001000000000000000011001410005060000000100000000000002100114020000000000040000000000200000000000000000000110030400000000030000020402100001310000000100001010000000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTA..................................................................................................................................................................................................................................................221156.00156000000010002000000001101200000000002000120040010062300000000000000000000000000000010303000010020011000000000300100010000000000000000000000000130001011000010000000000001000000000000100000090170100100200000000000000000100100000002000000000000000000000000000000000000000000010307240000000001000001124300100156000000000002011110000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGGA.....................................................................................................................................................................................................231150.00150000001021000000000000000000000000000100010100020260001000000000000000000000000000031250000000000100000000000103130030000000000000000000000100110010210000000000000000000000000000000000000000000000000000002000000000000100210111100000000000100000000000000000000000000000021117311780000000006100002232100000302000000000000000100000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTGC...............................................................................................................................................................................................................................................251149.001490000000000000000000000100000000000002000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000101000200001000000040000000000000000000000000000000000001306011000000000000000000101000000000000000001000000000000000000000000000000000001020000000000020000001190100008654000000200000000300300000
..........................................................................................TGGTTCGTCACAAG-GGCAATTT..................................................................................................................................................................................................................................................221146.0014600000010000200000000000700000000000100000020000110000000000000000000000000000000000101000000000130000010000000000020000000000000000000000000110701101000000000000000000000000000000000000090250000502400000001000000000210500020204000000000001000000000000000000000000010000110302000010000000000000002302200142000000100000020010000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAAAC...................................................................................................................................................................................................251141.0014100000000000000000000001000000000002002000401000131010000000000000000000000000000002020000000000100000000000010020000000000000000000000000000350010200000000000000000000000000000000000000000000000000000003100000000000002170410190000112000000000000000000000000000000000000192411010000000006000005194000000621000000000000000200000000
.........................................................................................................................................TTGCACTTGAGACGGCCTG.......................................................................................................................................................................................................191130.00130000000000000000000000000000000000000002000000000000000000000000000000000000000000101050000000000000000000000001000000000000000000000000002001000110000000000000000000000000000000000000000000000000200000000000000000111101231311000000000000000000000000000000000000000000638110062130000000002000001304000000271000000000000001000000000
.......................................................................................................................................TATTGCACTTGAGACGGCCA........................................................................................................................................................................................................201127.00127000010110000000000000030000000000040111003010000000010000000000000000000000000000000020001010000000000000000000110000000000000000000000000014200112100100000000000000000000000000000000000102000010200000000001000000001001000002000000000000000000000000000000000000000000133135170000000000020000031340000001243000000000000000401000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGGAA....................................................................................................................................................................................................241124.00124000000011000000000001010000000000000110000400000150101000000000000000000000000000001021000000000000000000001100110020000000000000000000000000231000100000000000000000000000000000000000000000010001000000001200000100000001001110000000000200300000000000000000000000000000021445215290000000004000001200000000011000000000000001101000000
.............................................................................................TTCGTCACAAG-GGCAATTCT.................................................................................................................................................................................................................................................201116.00116000000000000000000000100000000000000020000001000100100000000000000000000000000000200100000000000000000000000000000000000000000000000000000012030010000000000000000000000000000000000000000001000000020000001100000000110000000000000000000100000000000000000000000000000000156323102200000000000000000012000000311000000200000000201000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTGAGA....................................................................................................................................................................................................241100.001000000000200000000000000000000000000010020010001027000000000000000000000000000000000010100000000000000000000000000001000000000000000000000000050000000000000000000000000000000000000000000001000000000000000000000000000110034013120000000000000000000000000000000000000000002548211020010000001000000512000000235000000000000000302000000
.........................................................................................................................................TTGCACTTGAGACGGCCTGAAA....................................................................................................................................................................................................22190.00900000000000000000000000000000000000000100000000000000000000000000000000000000000004000400000001020000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000030000000000000313256160000000000000000000000000000000000000000006281601020000000000000000001000000000000000000000000001000000
..........................................................................................TGGTTCGTCACAAG-GGCAATTCTG................................................................................................................................................................................................................................................24183.00830000000000000000000000000000000000300100000000001000000011100000000000000000000000000000000000000000000000000011000000000000000000000000000002400011000010000000000000000000000000000000000000000000010010510000000001100000001300000000000000000000000000000000000000000000200020100000000030000011380000008511000000300000001100000000
.......................................................................................................................................TATTGCACTTGAGACGGCCTTC......................................................................................................................................................................................................22182.008200000010000000000000110000000000000010000103000001360100000000000000000000000000000000000000000000000000000000000000000000000000010000000000010020101001100000000000000000000000000000000000100000000000000000000000000001000000000000100000010000000000000000000000000000000221000600000000020000072163000000000000000000000001000000000
droEre2
AAAATGA------C-----------------CATATTTATATAATT---GATAA----TGTGAATTAAGT---------TTGAAGCGCTTCGGTTCGTACCAGG-AGCAATTCTGCATT----TT--TAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CAAAACATTTTAA--A---TAAA---------------AACTA-----------------------------------------------------------------------------------------------A------------------------------TACTAGT----------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................TATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................2226715.50134319540694162476641212149
.......................................................................................................................................TATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................2121811.5036232962208981294672
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................2321563.0031262344377069336297
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................242992.00198417991300294121
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................232729.5014596457551511818583
.......................................................................................................................................TATTGCACTTGAGACGGCCG........................................................................................................................................................................................................202418.0083650445816216452
........................................................................................................................................ATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................212346.0069265740013216
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT......................................................................................................................................................................................................222163.5032714014761183210
........................................................................................................................................ATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................20290.00180168200820
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAC.....................................................................................................................................................................................................23287.5017553150151100
........................................................................................................................................ATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................22285.50171157701105
........................................................................................................................................ATTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................23254.00108107000100
.......................................................................................................................................TATTGCACTTGAGACGGCCGT.......................................................................................................................................................................................................21242.00842603142120
........................................................................................................................................ATTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................22238.0076551101207
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATT....................................................................................................................................................................................................24235.50711430119232
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................19230.00601814011980
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATA....................................................................................................................................................................................................24223.504733101336
.......................................................................................................................................TATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................21222.5045251703000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAG.....................................................................................................................................................................................................23221.504336201004
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTA.....................................................................................................................................................................................................23219.0038142101038
.........................................................................................................................................TTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................20215.003029000100
.......................................................................................................................................TATTGCACTTGAGACGGCCT........................................................................................................................................................................................................20213.002610102040
.......................................................................................................................................TATTGCACTTGAGACGGCCGGC......................................................................................................................................................................................................22213.002671012105
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT......................................................................................................................................................................................................22212.502520101930
........................................................................................................................................ATTGCACTTGAGACGGCCG........................................................................................................................................................................................................19211.502321000200
.......................................................................................................................................TATTGCACTTGAGACGGCCGGG......................................................................................................................................................................................................2229.50199004105
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAC....................................................................................................................................................................................................2429.001841201100
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................1827.50157600020
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAA....................................................................................................................................................................................................2427.501510101300
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAG....................................................................................................................................................................................................2426.00129300000
..........................................................................................CGGTTCGTACCAGG-AGCAATTCT.................................................................................................................................................................................................................................................2325.50115000420
.........................................................................................................................................TTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................2125.501110100000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAT...................................................................................................................................................................................................2525.50117101002
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTT...................................................................................................................................................................................................2524.5092110500
.........................................................................................................................................TTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................2224.5099000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGT......................................................................................................................................................................................................2124.0085000300
.........................................................................................................................................TTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................2124.0083000005
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAC...................................................................................................................................................................................................2524.0086200000
.......................................................................................................................................TATTGCACTTGAGACGGCCA........................................................................................................................................................................................................2023.5072001400
........................................................................................................................................ATTGCACTTGAGACGGCCGGG......................................................................................................................................................................................................2123.5077000000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................2323.5073000004
..........................................................................................CGGTTCGTACCAGG-AGCAATTC..................................................................................................................................................................................................................................................2223.0066000000
......................................................................................................................................GTATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................2223.0066000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAC.....................................................................................................................................................................................................2223.0065000100
.......................................................................................................................................TATTGCACTTGAGACGGCCGC.......................................................................................................................................................................................................2123.0065000010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCA.....................................................................................................................................................................................................2322.5051103000
.........................................................................................................................................TTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................1922.5055000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTCAC.................................................................................................................................................................................................2722.5050000005
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTTT..................................................................................................................................................................................................2622.5050000302
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCAA....................................................................................................................................................................................................2422.5051103000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................2422.0044000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAT...................................................................................................................................................................................................2522.0043000100
........................................................................................................................................ATTGCACTTGAGACGGCCGGATT....................................................................................................................................................................................................2322.0043000100
..........................................................................................................................................TGCACTTGAGACGGCCGGA......................................................................................................................................................................................................1922.0042100010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTG.....................................................................................................................................................................................................2322.0040000130
.......................................................................................................................................TATTGCACTTGAGACGGT..........................................................................................................................................................................................................1821.5030000120
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAACT...................................................................................................................................................................................................2521.5032100000
.......................................................................................................................................TATTGCACTTGAGACGGCCC........................................................................................................................................................................................................2021.5033000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTC...................................................................................................................................................................................................2521.5030000003
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATC....................................................................................................................................................................................................2421.5030001002
..............................................................................................................................................CTTGAGACGGCCGGA......................................................................................................................................................................................................1521.5030000003
.......................................................................................................................................TATTGCACTTGAGACGGCCGGGA.....................................................................................................................................................................................................2321.5030003000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATA....................................................................................................................................................................................................2321.0022000000
droYak3
ACAATTA------C-----------------CATATTTATATTATTATAAATAAAGT-TACAAATTGCGT---------TTGAAGCGCTTCGGTTCGTCCCAGG-AGCAATTCTGCACT----ATT-AAAGCTAGTATTGCACTTGAGACGGCCGGATTACTTTTAAA-CGAATCATTTAA---AC----------AACGCA-T--------------------------------------------------------------------------------------TAAAA------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................TATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................22140588.004058829141162379517564177410112360
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................23116980.00169802332113043554415370013
.......................................................................................................................................TATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................21113682.0013682248887759860112012110020
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................2318548.0085481361525664417746560000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................2417817.0078171193255001845616000173
.......................................................................................................................................TATTGCACTTGAGACGGCCG........................................................................................................................................................................................................2011902.001902467399518343290047
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAC.....................................................................................................................................................................................................2311824.001824441381621140220003
.......................................................................................................................................TATTGCACTTGAGACGGCCGGT......................................................................................................................................................................................................2211366.00136603468738617520010
........................................................................................................................................ATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................2111237.0012370103019440020007
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATT....................................................................................................................................................................................................241563.00563159438925101200027
.......................................................................................................................................TATTGCACTTGAGACGGCCGGC......................................................................................................................................................................................................221401.00401111361191350000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATA....................................................................................................................................................................................................241379.00379094265110000018
........................................................................................................................................ATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................221364.00364024012310000000
........................................................................................................................................ATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................201351.0035103183100010010
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................191321.0032101629380110020
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAC....................................................................................................................................................................................................241282.0028201326630000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAG.....................................................................................................................................................................................................231218.0021845814670030000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................231195.0019501623200010000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................221193.0019301236720010000
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................181132.001320312511010010
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTA.....................................................................................................................................................................................................231124.001240358320040000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAT...................................................................................................................................................................................................251111.001110188530000005
.......................................................................................................................................TATTGCACTTGAGACGGCCGGG......................................................................................................................................................................................................221103.0010323827300330000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATC....................................................................................................................................................................................................241103.00103159520000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................21193.00930127820010000
.........................................................................................................................................TTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................20189.00890522800000009
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAG....................................................................................................................................................................................................24184.00840126820000002
..........................................................................................CGGTTCGTCCCAGG-AGCAATTCT.................................................................................................................................................................................................................................................23181.0081078100020000
.......................................................................................................................................TATTGCACTTGAGACGGCCGT.......................................................................................................................................................................................................21177.007701539600170000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCA.....................................................................................................................................................................................................23171.00710433320200000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAT...................................................................................................................................................................................................25169.00690233800010007
.......................................................................................................................................TATTGCACTTGAGACGGCCGGACA....................................................................................................................................................................................................24168.0068184561010006
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAA....................................................................................................................................................................................................24159.00590203720000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTT...................................................................................................................................................................................................25159.0059854020030001
.......................................................................................................................................TATTGCACTTGAGACGGCCGC.......................................................................................................................................................................................................21153.0053015010010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAC...................................................................................................................................................................................................25151.0051024700000002
........................................................................................................................................ATTGCACTTGAGACGGCCG........................................................................................................................................................................................................19137.0037032500000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCAA....................................................................................................................................................................................................24133.00330218130000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGT......................................................................................................................................................................................................21133.0033026700000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATG....................................................................................................................................................................................................24131.0031661540000000
.........................................................................................................................................TTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................19130.0030024600000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAC.....................................................................................................................................................................................................22128.00281101700000000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................21128.00280141400000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGGA.....................................................................................................................................................................................................23128.00280134110000000
.......................................................................................................................................TATTGCACTTGAGACGGCG.........................................................................................................................................................................................................19126.0026002600000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATAC...................................................................................................................................................................................................25123.0023051610100000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTC.....................................................................................................................................................................................................23122.0022021900010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGACC....................................................................................................................................................................................................24121.0021102000000000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGA......................................................................................................................................................................................................23118.0018016200000000
.......................................................................................................................................TATTGCACTTGAGACGGCCC........................................................................................................................................................................................................20118.0018111510000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATA....................................................................................................................................................................................................23117.0017013400000000
..........................................................................................................................................TGCACTTGAGACGGCCGGA......................................................................................................................................................................................................19116.0016010600000000
.........................................................................................................................................TTGCACTTGAGACGGCCGGAAA....................................................................................................................................................................................................22116.0016012400000000
..........................................................................................CGGTTCGTCCCAGG-AGCAATTC..................................................................................................................................................................................................................................................22116.001608530000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATCT...................................................................................................................................................................................................25114.0014001310000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTAA..................................................................................................................................................................................................26114.001408600000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGCC.....................................................................................................................................................................................................23112.0012001100100000
.......................................................................................................................................TATTGCACTTGAGACGGCT.........................................................................................................................................................................................................19112.0012001200000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTTTA.................................................................................................................................................................................................27112.0012000000000012
.........................................................................................................................................TTGCACTTGAGACGGCCGGAT.....................................................................................................................................................................................................21112.001209200010000
.......................................................................................................................................TATTGCACTTGAGACGGCCT........................................................................................................................................................................................................20111.001112620000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGTAC....................................................................................................................................................................................................24110.001001710010000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAACT...................................................................................................................................................................................................25110.0010001000000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGAAAG...................................................................................................................................................................................................25110.001003610000000
........................................................................................................................................ATTGCACTTGAGACGGCCGGATT....................................................................................................................................................................................................23110.001008100010000
......................................................................................................................................GTATTGCACTTGAGACGGCCGGAA.....................................................................................................................................................................................................2419.00909000000000
.......................................................................................................................................TATTGCACTTGAGACGGCCGGATTAAA.................................................................................................................................................................................................2719.00923300010000
........................................................................................................................................ATTGCACTTGAGACGGCCGGAG.....................................................................................................................................................................................................2219.00908100000000
droEug1
ACGGCTT----AAGTGA-------------------------------------AAT-TTAAAATAAAAT---------TTCTAGTATTTCGGTTCGCCTTTTG-TGCAATTTTAGAGT----CA----ATAGAAAATTGCACTTCAGACGGCCGGATGACTTGAAATACAAAACATCTTA---A---A------------------ATCTA---------GAAAA---------------------------------------------------------CTAAGTGTTAATTTTTTGTT-AATAG-----TTGTA--GTTTTCGGCTTATAAAGTTCCAGCAGAATAAATASizeHit CountTotal NormTotal
No Reads
droBia1
CAGC-GG----AGGTGA-----------------------------------------TATAGGC-ATAT---------TTTTGGCGTTTCGGTCCGTCCCAGG-AGCAATCCTGTATT----T---CCGACTAGAATTGCACTTGAGACGGCCGGAGTGCTTGAAAA-CAAGGAA--------------------AGTGCA-TAGAAACTAACTTAAAACTAG--CAG--------------TCGACCAGCTTTATTTTGCAGGCCGAGGTGGGTGGCAATGCGAT------GC-------TTTCTTCCCGTATTGCACTTGCCCCGGCCTATAAA-CTCGAGC----------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAGTGT----AA-------------------AAAT----------------TGTGTGTGTAAAC-ATAT---------TTCTGGTGTTCCGGTCCGTCTCAGG-CGCAATTCTGAATT----T---TCACCTAGTATTGCACTTGAGACGGCCGGAATACTTTAAATACGAAACATAAA-A--A---TGAA-----------------------------AATAA--TAG----------TGAAACTTTGCTGTAATTTACATGTCGCGGGCGGTGACAATGCGAGTTAT--GT---------TTATTACGTAT---------------------------TGC----------SizeHit CountTotal NormTotal
No Reads
droEle1
AGTGA------AAA--CATTTAAATTTTATC---------------------------TGTGTAC-TAAT---------TTCTGGTGTTTCGGTACGTCTATGG-GGCAATTCTGCGTT----TT--CTGGTTAGCATTGCACTTGAGACGGCCGCAACACTTTGGAATAAAAACATTTA-A--G---ACAGTTTA-------A--------------GAAAAT--ATT--------------TAATTCGGCATTAATTTATATGT----------------------------------------------------------------------------CGC----------SizeHit CountTotal NormTotal
No Reads
droRho1
AGTGC------AAA--TATTTAAATATAATC---------------------------TGCGAAC-AAAT---------TTCTGGTGTTTCGGCTCGTCTCAAA-AGCAATTCTTCGTT----TTTCTTGGCTAGCATTGCACTTGAGACGGCCGCAATACTTTGGATTTAAAACATTTA-A--G---CAAGTTTA-------T--------------TGAAAA--AGT--------------TATTTTTGCATTAATTTATATGTCGCTGGCGGTGACAATACAAGTTGTTGGT-------T-TTTTTTCGTATTGCACTGGCCCCGGCTTATAAAATCCTGGC----------SizeHit CountTotal NormTotal
No Reads
droFic1
AAGTTTG---CAAG----TTTTAATTAAATC----------------------G----GGAAAAC-CAAT---------TTCGAGTGTTTCGGT-CGTCTTGGGTGGCAATACTAAATTAACTTT--ATGGCTAGCATTGCACTTGAGACGGCCGAAATGCTTTAAATTTATAACATCTA-A--G---CAAG---------------ACCCA-------------------------------------------AAATTCTGAGCCGTGGACAGTGATAATGCGATTT-------------T-TATTTGCGTATTGCACTGGTCCCGGCCTATAA-------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGTCTTCTTGAAAG--AAGATAAACAAA----------------------------------AGCTCCGG---------CCGTAAAGGTCTGTGCTGTTTGAGG-TGCAAATCTGTGGT----TA--ATAGCCAGAATTGCACTTGAAACGGCCAGATCAAGGCGGCC-CAAAACATCGCA---A---CAAA---------------AATTT------A--GACAA--TTGTTCGGGTACTTGGAATTTGCCTTTGATCTGTACGTCGGTGGGGGTGGCAATGGGCATTAC-----------C-AACGTACTTATTGCACTCGCCC----------------CGG----------SizeHit CountTotal NormTotal
No Reads
droAna3
TCAATTT--AATAA--AAAATAAATAAT--------------AGTGTT----------TGTGCTTTTTAAAAAAAACATCTACAATTTTCCGGTGCGTCTCTAG-TGCAACTCTTGGTT----TTT-TATACAAGTATTGCACTTGAGACGGCCGAAATATAGTGGAT-CTAAGCGGCTAT-AACC----------GAAAA--------------------------------------------------------------------------------------------GT----------------------------------------------TTTC----------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................231108255.0010825514561054241248131068
.......................................................................................................................................TATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................211103377.0010337739189642025834838820
.......................................................................................................................................TATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................22131472.0031472147328985720262626
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................24125826.0025826557245087346210
.......................................................................................................................................TATTGCACTTGAGACGGCCG........................................................................................................................................................................................................20110555.00105558509044492151459
..........................................................................................CGGTGCGTCTCTAG-TGCAACT...................................................................................................................................................................................................................................................2113186.00318612119251130172
.......................................................................................................................................TATTGCACTTGAGACGGCC.........................................................................................................................................................................................................1912545.00254523249027140
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................2312291.002291412148555420
.......................................................................................................................................TATTGCACTTGAGACGGCCGAT......................................................................................................................................................................................................2211407.001407351307303302
........................................................................................................................................ATTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................2211249.0012497311714010
........................................................................................................................................ATTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................2011115.0011152668369130
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAG.....................................................................................................................................................................................................2311110.0011109108316110
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAC.....................................................................................................................................................................................................231973.009731294316020
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAT....................................................................................................................................................................................................241616.00616659114140
.......................................................................................................................................TATTGCACTTGAGACGGCCGAC......................................................................................................................................................................................................221526.00526351211000
........................................................................................................................................ATTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................211458.004581033502030
..........................................................................................CGGTGCGTCTCTAG-TGCAACC...................................................................................................................................................................................................................................................211440.0044014372000
.......................................................................................................................................TATTGCACTTGAGACGGCCGG.......................................................................................................................................................................................................211375.0037517117131110
.......................................................................................................................................TATTGCACTTGAGACGGC..........................................................................................................................................................................................................181341.0034193283010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAC....................................................................................................................................................................................................241341.00341332412011
.......................................................................................................................................TATTGCACTTGAGACGGCCGT.......................................................................................................................................................................................................211335.0033517269252193
........................................................................................................................................ATTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................231314.00314342791000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................211215.0021552100000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAG......................................................................................................................................................................................................221203.00203131759141
.........................................................................................................................................TTGCACTTGAGACGGCCGA.......................................................................................................................................................................................................191178.00178151620010
.......................................................................................................................................TATTGCACTTGAGACGGCCGATT.....................................................................................................................................................................................................231170.00170514521161
..........................................................................................CGGTGCGTCTCTAG-TGCAACTCT.................................................................................................................................................................................................................................................231162.00162123304257
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAG....................................................................................................................................................................................................241156.0015631485000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAT...................................................................................................................................................................................................251130.0013011235010
..........................................................................................CGGTGCGTCTCTAG-TGCAACTC..................................................................................................................................................................................................................................................221129.00129862015350
..........................................................................................CGGTGCGTCTCTAG-TGCAAC....................................................................................................................................................................................................................................................201127.0012709631000
.......................................................................................................................................TATTGCACTTGAGACGGCCGC.......................................................................................................................................................................................................211112.0011206546100
.......................................................................................................................................TATTGCACTTGAGACGGCCA........................................................................................................................................................................................................20199.009911853000
.......................................................................................................................................TATTGCACTTGAGACGGCCC........................................................................................................................................................................................................20197.00970925000
........................................................................................................................................ATTGCACTTGAGACGGCCG........................................................................................................................................................................................................19191.009137530010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAACA....................................................................................................................................................................................................24174.00744637000
.........................................................................................................................................TTGCACTTGAGACGGCCGAA......................................................................................................................................................................................................20173.00733690010
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAC...................................................................................................................................................................................................25169.00692652000
.........................................................................................................................................TTGCACTTGAGACGGCCGAAAA....................................................................................................................................................................................................22166.00664620000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAATA....................................................................................................................................................................................................24162.00621574000
..........................................................................................................................................TGCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................20160.00601590000
.......................................................................................................................................TATTGCACTTGAGACGGCCT........................................................................................................................................................................................................20155.00556386041
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAAAG...................................................................................................................................................................................................25149.00491471000
.......................................................................................................................................TATTGCACTTGAGACGGCCGAAGA....................................................................................................................................................................................................24143.00431402000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATC.....................................................................................................................................................................................................23137.00370343000
..........................................................................................................................................TGCACTTGAGACGGCCGA.......................................................................................................................................................................................................18135.00351340000
.......................................................................................................................................TATTGCACTTGAGACGGCCGTT......................................................................................................................................................................................................22131.00313251020
.......................................................................................................................................TATTGCACTTGAGACGGCT.........................................................................................................................................................................................................19129.00290281000
...........................................................................................................................................GCACTTGAGACGGCCGAAA.....................................................................................................................................................................................................19127.00270270000
........................................................................................................................................ATTGCACTTGAGACGGCCGAAT.....................................................................................................................................................................................................22126.00260260000
........................................................................................................................................ATTGCACTTGAGACGGCC.........................................................................................................................................................................................................18125.00253220000
.......................................................................................................................................TATTGCACTTGAGACGGCCGATG.....................................................................................................................................................................................................23124.00242180040
droBip1
TTAAAAA------A-----------------AAAATAATAATTGCAAGTGTGTGTGT-TTGGATTTATGT---------CTACAATTTTCGGGGTCATCTCCAG-TGCAAATCTTGGTT----TTT-CCAACAAGAATTGCACTCGAGACGGCCAGAATATTGTGGAT-CTATGCAGCTAC-AAGCCG--------AAAGTGT---------------------------------------------------------------------------------------TTA---------------------------------------------------G----------SizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 06:49 PM