ID:

dse-mir-310

 Coordinate:

scaffold_1:14025480-14025568 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.5

Flybase annnotation

pre_miRNA [Dsec\mir-310-RM]; utr3 [utr3_minus_3794]; miRNA [Dsec\miR-310-RA]; pre_miRNA [Dsec\mir-311-RM]; utr3 [utr3_minus_3795]; miRNA [Dsec\miR-311-RA]

No Repeatable elements found

Sense Strand Reads

GAAAATATCAAGAATTAGCATCGAAAAAGAAAAATAAAAGTGCTTGCAAAAACATAAACATTTGCAGGACGGGTCGTGTGTCAGTGTATTTACTTCTTAACTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTTCAACTTTAATATCTGTGAAATCATAAAATTATATAACGCAAGTTGCGCT

**************************************************(((((..(((((((.(((.((((..(((((.(((((((.(((.....))).))))))))))))..)))).))).)))))))...))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V114

embryo

 V115

head

 V113

male body
.......................................................................................................TATTGCACACTTCCCGGCCTTT................................................................ 22 0 1 12571.00 12571 12156 349 56 10
.......................................................................................................TATTGCACACTTCCCGGCCTT................................................................. 21 0 1 2018.00 2018 1803 186 24 5
........................................................................................................ATTGCACACTTCCCGGCCTTT................................................................ 21 0 1 731.00 731 731 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTA............................................................... 23 0 1 446.00 446 421 20 3 2
.......................................................................................................TATTGCACACTTCCCGGCCT.................................................................. 20 0 1 194.00 194 119 65 3 7
.......................................................................................................TATTGCACACTTCCCGGCCTTTAA.............................................................. 24 0 1 154.00 154 126 26 2 0
.......................................................................................................TATTGCCCACTTCCCGGCCTTT................................................................ 22 1 1 100.00 100 100 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTT................................................................. 20 0 1 82.00 82 81 1 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTGT................................................................ 22 1 1 80.00 80 80 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTT............................................................... 23 1 1 80.00 80 74 4 0 2
.......................................................................................................TATTGCACACTTCCCGGCCTTTAAA............................................................. 25 0 1 77.00 77 70 7 0 0
.................................................................AGGACGGGTCGTGTGTCAGTGTA..................................................................................................... 23 0 1 71.00 71 60 2 4 5
.......................................................................................................TATTGCACACTTCCCGCCCTTT................................................................ 22 1 1 54.00 54 52 2 0 0
.......................................................................................................TATTGCACCCTTCCCGGCCTTT................................................................ 22 1 1 51.00 51 51 0 0 0
.........................................................................................................TTGCACACTTCCCGGCCTTT................................................................ 20 0 1 48.00 48 46 2 0 0
.......................................................................................................TATTGCACACTTCCCTGCCTTT................................................................ 22 1 1 46.00 46 45 1 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTA................................................................ 22 1 1 43.00 43 31 7 5 0
.......................................................................................................TATTGCAAACTTCCCGGCCTTT................................................................ 22 1 1 31.00 31 31 0 0 0
.......................................................................................................TATTCCACACTTCCCGGCCTTT................................................................ 22 1 1 31.00 31 30 1 0 0
.......................................................................................................TATTGCACACTTCCCGGACTTT................................................................ 22 1 1 30.00 30 30 0 0 0
.......................................................................................................TATTTCACACTTCCCGGCCTTT................................................................ 22 1 1 27.00 27 27 0 0 0
......................................................................................................CTATTGCACACTTCCCGGCCTTT................................................................ 23 1 1 27.00 27 27 0 0 0
.......................................................................................................TATTGCACACTTCTCGGCCTTT................................................................ 22 1 1 26.00 26 16 10 0 0
.......................................................................................................AATTGCACACTTCCCGGCCTTT................................................................ 22 1 1 26.00 26 26 0 0 0
.......................................................................................................TATTGCACACTTCCTGGCCTTT................................................................ 22 1 1 26.00 26 24 1 1 0
........................................................................................................ATTGCACACTTCCCGGCCTTTA............................................................... 22 0 1 24.00 24 24 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTG............................................................... 23 1 1 21.00 21 21 0 0 0
.......................................................................................................GATTGCACACTTCCCGGCCTTT................................................................ 22 1 1 20.00 20 20 0 0 0
......................................................................................................GTATTGCACACTTCCCGGCCTTT................................................................ 23 1 1 19.00 19 19 0 0 0
.......................................................................................................TATTGTACACTTCCCGGCCTTT................................................................ 22 1 1 18.00 18 18 0 0 0
.......................................................................................................CATTGCACACTTCCCGGCCTTT................................................................ 22 1 1 17.00 17 17 0 0 0
.......................................................................................................TATTGCACACTTCCCGTCCTTT................................................................ 22 1 1 16.00 16 15 1 0 0
.......................................................................................................TGTTGCACACTTCCCGGCCTTT................................................................ 22 1 1 16.00 16 16 0 0 0
.......................................................................................................TATCGCACACTTCCCGGCCTTT................................................................ 22 1 1 15.00 15 15 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAAAA............................................................ 26 1 1 15.00 15 14 1 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTG................................................................. 21 1 1 15.00 15 14 1 0 0
.................................................................AGGACGGGTCGTGTGTCAGTGT...................................................................................................... 22 0 1 15.00 15 12 1 1 1
.......................................................................................................TAGTGCACACTTCCCGGCCTTT................................................................ 22 1 1 14.00 14 14 0 0 0
......................................................................................................ATATTGCACACTTCCCGGCCTTT................................................................ 23 0 1 13.00 13 13 0 0 0
.......................................................................................................TATTGCACATTTCCCGGCCTTT................................................................ 22 1 1 12.00 12 11 1 0 0
.......................................................................................................TATTACACACTTCCCGGCCTTT................................................................ 22 1 1 11.00 11 10 1 0 0
.......................................................................................................TTTTGCACACTTCCCGGCCTTT................................................................ 22 1 1 11.00 11 11 0 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCTT................................................................. 21 1 1 11.00 11 11 0 0 0
.......................................................................................................TATTGCACACTTCCCGGTCTTT................................................................ 22 1 1 11.00 11 5 6 0 0
.......................................................................................................TATTGCATACTTCCCGGCCTTT................................................................ 22 1 1 10.00 10 10 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTAA............................................................... 23 1 1 10.00 10 6 4 0 0
.......................................................................................................TATTGCACACTTTCCGGCCTTT................................................................ 22 1 1 10.00 10 9 1 0 0
......................................................................................................TTATTGCACACTTCCCGGCCTTT................................................................ 23 1 1 10.00 10 10 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCCTT................................................................ 22 1 1 9.00 9 9 0 0 0
.......................................................................................................TATTGCGCACTTCCCGGCCTTT................................................................ 22 1 1 9.00 9 9 0 0 0
.......................................................................................................TATTGCACACTCCCCGGCCTTT................................................................ 22 1 1 9.00 9 9 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCC................................................................... 19 0 1 8.00 8 6 2 0 0
........................................................................................................ATTGCACACTTCCCGGCCT.................................................................. 19 0 1 8.00 8 8 0 0 0
.......................................................................................................TATTGCACACTTCCCGGACTT................................................................. 21 1 1 8.00 8 8 0 0 0
.......................................................................................................TATAGCACACTTCCCGGCCTTT................................................................ 22 1 1 8.00 8 8 0 0 0
.......................................................................................................TATTGCACACTTCCCGACCTTT................................................................ 22 1 1 7.00 7 6 0 1 0
.................................................................AGGACGGGTCGTGTGTCAGTG....................................................................................................... 21 0 1 7.00 7 6 0 1 0
.......................................................................................................TATTGCACACTTCCCGGCCTTAAA.............................................................. 24 1 1 7.00 7 7 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTC................................................................ 22 1 1 7.00 7 6 0 1 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTC............................................................... 23 1 1 7.00 7 7 0 0 0
.......................................................................................................TATTGCACACCTCCCGGCCTTT................................................................ 22 1 1 7.00 7 7 0 0 0
.......................................................................................................TATTGCACGCTTCCCGGCCTTT................................................................ 22 1 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCCTT................................................................. 21 1 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA........................................................... 27 2 1 6.00 6 4 2 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCTTTA............................................................... 23 1 1 6.00 6 6 0 0 0
.......................................................................................................CATTGCACACTTCCCGGCCTT................................................................. 21 1 1 6.00 6 6 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTTT............................................................... 22 1 1 6.00 6 6 0 0 0
...........................................................................................................GCACACTTCCCGGCCTTT................................................................ 18 0 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCTTTT................................................................ 22 1 1 6.00 6 2 4 0 0
.......................................................................................................TATTGCACACTTCCCGGCCGTT................................................................ 22 1 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCACACTTCCCTGCCTT................................................................. 21 1 1 6.00 6 6 0 0 0
........................................................................................................ATTGCACACTTCCCGGCATTT................................................................ 21 1 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCCCCCTTCCCGGCCTTT................................................................ 22 2 1 6.00 6 6 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCGTTT................................................................ 22 1 1 5.00 5 5 0 0 0
.......................................................................................................AATTGCACACTTCCCGGCCTT................................................................. 21 1 1 5.00 5 5 0 0 0
.......................................................................................................TATTGCACACTGCCCGGCCTTT................................................................ 22 1 1 5.00 5 5 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTTAA.............................................................. 23 0 1 5.00 5 4 1 0 0
.......................................................................................................TATTGAACACTTCCCGGCCTTT................................................................ 22 1 1 5.00 5 5 0 0 0
.......................................................................................................TATTGCACACTTCCCCGCCTTT................................................................ 22 1 1 5.00 5 5 0 0 0
..........................................................................................................TGCACACTTCCCGGCCTTT................................................................ 19 0 1 5.00 5 5 0 0 0
........................................................................................................ATTGAACACTTCCCGGCCTTT................................................................ 21 1 1 5.00 5 5 0 0 0
........................................................................................................ATTGCACACTTCCCTGCCTTT................................................................ 21 1 1 5.00 5 5 0 0 0
.......................................................................................................TATTGCACACTTCCCAGCCTTT................................................................ 22 1 1 5.00 5 3 1 1 0
........................................................................................................ATTGCACACTTCCCGGCCTTTAAA............................................................. 24 0 1 4.00 4 4 0 0 0
.......................................................................................................TATTGCACACTTCCCAGCCTT................................................................. 21 1 1 4.00 4 3 1 0 0
......................................................................................................CTATTGCACACTTCCCGGCCTT................................................................. 22 1 1 4.00 4 4 0 0 0
.......................................................................................................TACTGCACACTTCCCGGCCTTT................................................................ 22 1 1 4.00 4 4 0 0 0
......................................................................................................CTATTGCACACTTCCCGGCCTTTA............................................................... 24 1 1 4.00 4 4 0 0 0
.......................................................................................................TAGTGCACACTTCCCGGCCTGT................................................................ 22 2 1 4.00 4 4 0 0 0
..................................................................GGACGGGTCGTGTGTCAGTGTA..................................................................................................... 22 0 1 4.00 4 4 0 0 0
.......................................................................................................GATTGCACACTTCCCGGCCTT................................................................. 21 1 1 4.00 4 3 1 0 0
.......................................................................................................TATTGCACCCTTCCCGGCCTT................................................................. 21 1 1 4.00 4 4 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTA................................................................ 21 1 1 4.00 4 4 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCTTT................................................................. 21 1 1 4.00 4 1 3 0 0
.......................................................................................................TATTGCACACTTCGCGGCCTTT................................................................ 22 1 1 4.00 4 4 0 0 0
.......................................................................................................TGTTGCACACTTCCCGGCCTT................................................................. 21 1 1 4.00 4 4 0 0 0
........................................................................................................ATTGCACACTTCCCGTCCTTT................................................................ 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTTCACACTTCCCGGCCTTTA............................................................... 23 1 1 3.00 3 3 0 0 0
..................................................................GGACGGGTCGTGTGTCAGTGT...................................................................................................... 21 0 1 3.00 3 3 0 0 0
.........................................................................................................TTGCACACTTCCCGGCCTT................................................................. 19 0 1 3.00 3 2 1 0 0
.......................................................................................................TATTACACACTTCCCGGCCTT................................................................. 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACACTTCACGGCCTTT................................................................ 22 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTGTA............................................................... 23 1 1 3.00 3 3 0 0 0
.................................................................AGGACGGGTCGTGTGTCAGT........................................................................................................ 20 0 1 3.00 3 3 0 0 0
........................................................................................................ATTGCACACTTCCCGGGCTTG................................................................ 21 2 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCAAACTTCCCGGCCTT................................................................. 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACCCTTCCCGGCCGTT................................................................ 22 2 1 3.00 3 3 0 0 0
......................................................................................................ATATTGCACACTTCCCGGCCTT................................................................. 22 0 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTA................................................................. 21 1 1 3.00 3 0 3 0 0
........................................................................................................TTTGCACACTTCCCGGCCTTT................................................................ 21 1 1 3.00 3 3 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTG................................................................ 21 1 1 3.00 3 3 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTC................................................................ 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTTCACACTTCCCGGCCTT................................................................. 21 1 1 3.00 3 3 0 0 0
........................................................................................................ATTGCACACTTCCCGCCCTTT................................................................ 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTCT................................................................ 22 1 1 3.00 3 2 1 0 0
.......................................................................................................TATTGCCCCCTTCCCGGACTTT................................................................ 22 3 1 3.00 3 3 0 0 0
........................................................................................................ATTGCAAACTTCCCGGCCTTT................................................................ 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATTGCACACTTCCTGGCCTT................................................................. 21 1 1 3.00 3 3 0 0 0
.......................................................................................................TATAGCACACTTCCCGGCCTT................................................................. 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTGCCGGCCTTT................................................................ 22 1 1 2.00 2 2 0 0 0
........................................................................................................ATTGCACACTTCCCTGCCTT................................................................. 20 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACCCTTCCCGGCCGT................................................................. 21 2 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCGGC.................................................................... 18 0 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCAGACTTCCCGGCCTT................................................................. 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCTGCCTGT................................................................ 22 2 1 2.00 2 2 0 0 0
.................................................................AGGACGGGTCGTGGGTCAGGGTA..................................................................................................... 23 2 1 2.00 2 2 0 0 0
........................................................................................................ATTGCTCACTTCCCGGCCTTT................................................................ 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCGTCCTTTAAA............................................................. 25 1 1 2.00 2 2 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCTGT................................................................ 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCAAACTTCCCGGCCTTTA............................................................... 23 1 1 2.00 2 2 0 0 0
........................................................................................................ATTGCACAATTCCCGGCCTTT................................................................ 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCGGGCTTT................................................................ 22 1 1 2.00 2 1 1 0 0
........................................................................................................ATTGCACACTTCCCGCCCTT................................................................. 20 1 1 2.00 2 2 0 0 0
.........................................................................................................TTGTACACTTCCCGGCCTTT................................................................ 20 1 1 2.00 2 2 0 0 0
.......................................................................................................TATACCACACTTCCCGGCCTTT................................................................ 22 2 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACAGTTCCCGGCCTTT................................................................ 22 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCCGCCTT................................................................. 21 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGCACCCTTCCCGTCCTTT................................................................ 22 2 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTTA.............................................................. 24 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAG.............................................................. 24 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGCAGACTTCCCGGCCTTT................................................................ 22 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCCCCCTTCCCGGCCTT................................................................. 21 2 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTGCCCGGCCTT................................................................. 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTTCTCGGCCTT................................................................. 21 1 1 2.00 2 0 2 0 0
.......................................................................................................TATTGCACACTTCCCGTCCTTTA............................................................... 23 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGCGCACTTCCCGGCCTTTA............................................................... 23 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGGACACTTCCCGGCCTTT................................................................ 22 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGCACACTCCCCGGCCTT................................................................. 21 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCACACTACCCGGCCTTT................................................................ 22 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCCCACTTCCCGCCCTTT................................................................ 22 2 1 2.00 2 2 0 0 0
......................................................................................................GTATTGCACACTTCCCGGCCTT................................................................. 22 1 1 2.00 2 2 0 0 0
..........................................................................................................TTCACACTTCCCGGCCTTT................................................................ 19 1 1 2.00 2 2 0 0 0
.......................................................................................................TATTGCGCACTTCCCGGCCTT................................................................. 21 1 1 2.00 2 1 1 0 0
.......................................................................................................TATTGCACACTTCCCCCCTTT................................................................. 21 3 7 1.43 10 10 0 0 0
........................................................................................................TATTCACACTTCCCGGCCTTT................................................................ 21 3 4 1.25 5 5 0 0 0
.......................................................................................................TATTGCACACTTCCTGGCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCCTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTGA.............................................................. 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTCCGCACTTCCCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATTTCCCGGCCTTTAAA............................................................. 25 1 1 1.00 1 0 0 1 0
........................................................................................................ATGGCACACTTCCCGGCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCCTTAA............................................................... 23 2 1 1.00 1 1 0 0 0
.....................................................................................................AGTATTGCACACTTCCCGGCCTTT................................................................ 24 2 1 1.00 1 1 0 0 0
.........................................................................................................TTGCACACTTCCCGGCCTCT................................................................ 20 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCTCACTTCCCGGCCTTT................................................................ 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCTCGGCCTTTAAAA............................................................ 26 2 1 1.00 1 0 1 0 0
.......................................................................................................TCTTGCGCACTTCCCGGCCTTT................................................................ 22 2 1 1.00 1 0 1 0 0
.................................................................AGGACGGGGCGTGTGTCAGTGT...................................................................................................... 22 1 1 1.00 1 1 0 0 0
.................................................................AGGACGTGTCGTGTGTCAGTG....................................................................................................... 21 1 1 1.00 1 0 0 0 1
.......................................................................................................AATTGCACACTTCCCGGACTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACTCTTCCCGGCCT.................................................................. 20 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCACACTTACCGGCCTTT................................................................ 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCGT................................................................. 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTGCCCGTCCTT................................................................. 21 2 1 1.00 1 1 0 0 0
......................................................................................................ATATTGCACACTTCCCGGCCCTT................................................................ 23 1 1 1.00 1 1 0 0 0
......................................................................................................CCATTGCACACTTCCCGGCCTTT................................................................ 23 2 1 1.00 1 1 0 0 0
..........................................................................................................TGCACACTTCCCGGCCTT................................................................. 18 0 1 1.00 1 1 0 0 0
.......................................................................................................CATTGCACACTTCCCGGCCT.................................................................. 20 1 1 1.00 1 1 0 0 0
.................................................................AGGACGCGTCGTGTGTCAGTGTA..................................................................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCTCGGCCTTA................................................................ 22 2 1 1.00 1 0 1 0 0
........................................................................................................ATTCCACACTTCCCGGCCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTTAAGA........................................................... 27 3 1 1.00 1 1 0 0 0
..................................................................GGACGGGTCGTGTTTCAGTGTA..................................................................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCTTTAA.............................................................. 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACGCTTCCCGGCCTTTA............................................................... 23 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCACACTTCCCGGACTTA................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACATCCCGGCCTTT................................................................ 22 1 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCAGCCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATTTCCCGGCCTTTAA.............................................................. 24 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCAAACTTCCCGGCCTGC................................................................ 22 3 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCGACCTTTA............................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCTTTT............................................................... 23 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCCTTT............................................................... 23 2 1 1.00 1 0 1 0 0
......................................................................................................GTATTGCACAATTCCCGGCCTT................................................................. 22 2 1 1.00 1 1 0 0 0
.........................................................................................................TATCACACTTCCCGGCCTTT................................................................ 20 2 2 1.00 2 2 0 0 0
........................................................................................................ATTGCACACTCCCCTGCCTTT................................................................ 21 2 1 1.00 1 1 0 0 0
.........................................................................................................TTTCACACTTCCCGGCCTTT................................................................ 20 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTCCCCGGACTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.....................................................................................................ACTATTGCACACTTCCCGGCCTTT................................................................ 24 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTCCACACTTCCCGGCCTA................................................................. 21 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATCTCCCGGCCTATAA.............................................................. 24 3 1 1.00 1 1 0 0 0
...........................................................................................................GCACACTTCCCGTCCTTTAT.............................................................. 20 2 1 1.00 1 1 0 0 0
........................................................................................................AGTGCACACTTCCCGGCCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
.......................................................................................................AATTGCACACTTCCCGGCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
........................................................................................................ATTGCAAACTTCCCGGCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
.................................................................AGGACGGGTCGTGTGTCAGTGTAAAA.................................................................................................. 26 3 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCACACTTCCCGCTCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGAGTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCTTT................................................................. 21 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATCTCCCGGCCTT................................................................. 21 2 1 1.00 1 1 0 0 0
.................................................................AGGACGGGTCGTGTGTCAGTAT...................................................................................................... 22 1 1 1.00 1 1 0 0 0
....................................................................................................AGCTATTGCACACTTCCCGGCCTTT................................................................ 25 3 1 1.00 1 1 0 0 0
...................................................................................................AAATTATTGCACACTTCCCGGCCTTT................................................................ 26 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCAAACTTCCCGGCCTTA................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCTTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATCTCCCGGCCTA................................................................. 21 3 2 1.00 2 2 0 0 0
........................................................................................................GTTGCACACTTCCCGGCCTTTT............................................................... 22 2 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCGTCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
.....................................................................................................AATATTGCACACTTCCCGGCCTTT................................................................ 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCCCTTCCCGGCCTTG................................................................ 22 3 1 1.00 1 1 0 0 0
.....................................................................................................ATTATTGCACACTTCCCGGCCTTT................................................................ 24 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCACTTCCCGGCCT.................................................................. 20 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACGTCCCGGCCTTT................................................................ 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTACA............................................................. 25 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGTACTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACCCTTCCCGTACTT................................................................. 21 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTCTG............................................................. 25 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACATTTCCCGGCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
.................................................................AGGACGGGTCGTGTGTCAGTGTAAAAA................................................................................................. 27 3 1 1.00 1 1 0 0 0
.......................................................................................................TCTTGCACACTTCCCGGCCTTT................................................................ 22 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCACCCATCCCGTCCTTT................................................................ 22 3 1 1.00 1 1 0 0 0
........................................................................................................ATTCCACACTTCCCGGCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCGGCCGTTA............................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTGGC............................................................. 25 3 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCTCCCTTT................................................................ 21 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTCCCCACTTCCCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTTCCGGCCTT................................................................. 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTCAAA............................................................. 25 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCCGCCTTTAA.............................................................. 24 1 1 1.00 1 0 1 0 0
......................................................................................................CTATTGCACACTTCCCGGCCTTTT............................................................... 24 2 1 1.00 1 1 0 0 0
.....................................................................................................CTTATTGCACACTTCCCGGCCTTT................................................................ 24 2 1 1.00 1 1 0 0 0
..................................................................TGACGGGTCGTGTGTCAGTGTA..................................................................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGACTTTAAA............................................................. 25 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACCCTTCCCGGCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCCGCCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
........................................................................................................AGTGCACACTTCCCGGCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
.......................................................................................................AATTGCACACTTCCCGGCCTTTAA.............................................................. 24 1 1 1.00 1 1 0 0 0
.....................................................................................................CATATTGCACACTTCCCGGCCTTT................................................................ 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGTCTT................................................................. 21 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCCCACTTCCCGGACTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGTCT.................................................................. 20 1 1 1.00 1 0 1 0 0
........................................................................................................ATTGCACACTTCCCGGCCTTTC............................................................... 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGTACACTTCCCGGCCTTTA............................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCGGGCCTTT................................................................ 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGGCTTC................................................................ 22 2 1 1.00 1 1 0 0 0
.........................................................................................................TTGCACACTTCCCGGCCTTTA............................................................... 21 0 1 1.00 1 0 1 0 0
.......................................................................................................TATGGCACACTTCCCGGCCTGT................................................................ 22 2 1 1.00 1 1 0 0 0
.................................................................AGGACGGGTCGTGTGTCAGTGTT..................................................................................................... 23 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCCCACATCCCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAT.............................................................. 24 1 1 1.00 1 1 0 0 0
.................................................................AGGACGGGTTGTGTGTCAGTGTA..................................................................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCCGCCTC................................................................. 21 2 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCCCACCTCCCGGCCTTT................................................................ 22 2 1 1.00 1 0 1 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTAT................................................................ 22 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCCCACTTCCCGTCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAGA............................................................. 25 1 1 1.00 1 0 0 0 1
.......................................................................................................AATTGCACACTCCCCGGCCTGT................................................................ 22 3 1 1.00 1 1 0 0 0
........................................................................................................ATTACACACTTCCCGGCCTT................................................................. 20 1 1 1.00 1 1 0 0 0
......................................................................................................CTATTGCACACTTCCCGTCCTT................................................................. 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACGCTTCCCGGCCTT................................................................. 21 1 1 1.00 1 0 1 0 0
.......................................................................................................ATTTGCACACTTCCCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCTGCCTG................................................................. 21 2 1 1.00 1 1 0 0 0
.....................................................................................................GTTATTGCACACTTCCCGGCCTTT................................................................ 24 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTGTT............................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................ACGACGGGTCGTGTGTCAGTGTA..................................................................................................... 23 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTTCACACTTCCCGGCCTTTAA.............................................................. 24 1 1 1.00 1 1 0 0 0
......................................................................................................CTATTGCACACTTCCCTGCCTTT................................................................ 23 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTTAAA............................................................ 26 2 1 1.00 1 1 0 0 0
......................................................................................................CTATTGCACACCTCCCGGCCTTT................................................................ 23 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCAACCTTCCCGGCCGTT................................................................ 22 3 1 1.00 1 1 0 0 0
.........................................................................................................TTGCACACTTCCCGGCCTTTAAA............................................................. 23 0 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTCCCCTTCCTTT................................................................ 22 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGTACCCTTCCCGGACTTT................................................................ 22 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTTAC.............................................................. 24 1 1 1.00 1 1 0 0 0
........................................................................................................ATGGCACACTTCCCGGCCGTT................................................................ 21 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACGCTTCCCGGACTTT................................................................ 22 2 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACCCTTCCCGGCCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCC.................................................................. 20 1 1 1.00 1 0 1 0 0
.......................................................................................................TATTTCACACTTCTCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCTTAT............................................................... 23 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACCCATCCCGGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
........................................................................................................ATTGCACACTTCCCGCTCTTTAAA............................................................. 24 2 1 1.00 1 1 0 0 0
......................................................................................................TTATTGAACACTTCCCGGCCTTT................................................................ 23 2 1 1.00 1 1 0 0 0
...................................................................................................CGTCTATTGCACACTTCCCGGCCTTT................................................................ 26 3 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGGCCA.................................................................. 20 1 1 1.00 1 0 1 0 0
........................................................................................................ATTGCACACTTCCCGGGCTTT................................................................ 21 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCTCCGCCTTT................................................................ 22 2 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTCCCCGGCCTTTAA.............................................................. 24 1 1 1.00 1 1 0 0 0
.......................................................................................................TATTGCACACTTCCCGCCCTTTAA.............................................................. 24 1 1 1.00 1 1 0 0 0
......................................................................................................GGATTGCACACTTCCCGGCCTTT................................................................ 23 2 1 1.00 1 1 0 0 0

Anti-sense strand reads

CTTTTATAGTTCTTAATCGTAGCTTTTTCTTTTTATTTTCACGAACGTTTTTGTATTTGTAAACGTCCTGCCCAGCACACAGTCACATAAATGAAGAATTGATATAACGTGTGAAGGGCCGGAAATTTACAGGTTACAAAGTTGAAATTATAGACACTTTAGTATTTTAATATATTGCGTTCAACGCGA

*************************************************(((((..(((((((.(((.((((..(((((.(((((((.(((.....))).))))))))))))..)))).))).)))))))...))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body

 V115

head
............................................................................................................GTGTGATGGGCTGGAAATCT............................................................. 20 3 1 1.00 1 1 0 0
...................TAGCTTTTTCTTTTTATTACC..................................................................................................................................................... 21 2 3 0.33 1 0 1 0
............................................................................................................GAGTGATGGGCTGGAAAT............................................................... 18 3 20 0.15 3 0 2 1
........................................................................................................................GGAGATTTACTGGTTCCAA.................................................. 19 3 17 0.06 1 1 0 0
..................GTAGCTATTTCTTTTTGGTTT...................................................................................................................................................... 21 3 18 0.06 1 0 1 0
..............................................................................................................GTGATGGGCTGGAAATCT............................................................. 18 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_1:14025430-14025618 - dse-mir-310 Known_mirbase GAAAATATCAAGAATTAGCATCG---AAAAAGAAAAATAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTGTATTTAC-----TTCTT-------------AACTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-T
droSim2 2r:17040685-17040872 - dsi-mir-310 Known_mirbase GAAAATATCAAGAATTAGCATCG---AAAAAGAAAA-AAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTATATTTAC-----TTCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-T
dm3 chr2R:16471207-16471394 - dme-mir-310 Known_mirbase GAAAATATCAAGAATTAACATCG---AAAAGTGAAA-AAAAAGTGT----------TT---G------CGAA----AACATAAACATTTG-CAGGGCGGGTCGTGTGTCAGTGTATTTAT-----ATCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACA---TTTAAATCTGTGAAA--TCGTAAAATTATAAA----AATCCAGTTG------------------------CGC-T
droEre2 scaffold_4845:10616385-10616559 - der-mir-310a Known_mirbase GAAAATATCAAGGACTTACATCA---A------------AAAGT-C----------TT---G------CAAA----TACACAAATATTTG-CAGGACGGGTCGTGTGTCAATGTATTGAT-----CTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CAACT---TGAATATCTGTGAAA--TCATAAAATTATATA----A-TCAATTTG------------------------GAC-T
droYak3 2R:12724896-12725072 + dya-mir-310 Known_mirbase GAAAATATCAAGGACTTGCATCG---A------------AAAGTGC----------TT---G------CAAA----TACACAAACATTTG-CAGGACGGGTCGTGTGGCAGTGTATTGAT-----TTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CGACT---TGGATATCTGTGAAA--TCATAAAATTATATA----ATTCAATTTG------------------------GGC-T
droEug1 scf7180000409474:1490314-1490492 + GAAAAGATTAGGGATATTCTTTA---A------------AAAGTGA----------GT---G------CACG----TACACAAACATTTG-CAGGTGGGGTTGTGGGCAAATATATTTAT-----TTTTC------------AAGTTATATTGCACACTTCCCGGCCTTTAAATGTCCAGTGTTT-CGACCC--TAAACATCTGTGAAA--TCATAAAATTATATA----ATTTCATATT------------------------CGC-T
droBia1 scf7180000302291:2816528-2816721 + CTAAACATCAAGGGCATTCCTCA---A------------AAAGCGC----------CT---G------CAAA----TACACAAGCATTTG-CAGGCCGGGTCGCGTGCCAATGTATTGAC-----T-TCA-------------GGCTATATTGCACACCTCCCGGCCCATAAATGCAAGGTGTTT-CAACA---AAAACATCTGAG--G--TTGTGAAGTTA--------ACTCCATATTTGTTATATTATATATTGTACATTTTAT-T
droTak1 scf7180000415401:99578-99759 - GAAAATATCAAGGGTGTTCCTCA---A------------AAAGTTC----------CT---G------CAAATACACACACACACATTTG-CAGGCTGGGTTGTGTGTTAATATATTGAT-----T-TTA-------------AGCTATATTGCACACTTCCCGGCCTATAAATGCCAAGTGTTT-CGACC---AAAATATCTGTGAAA--TCGTGGAATTACATGTATTACTTAATTTT------------------------G---T
droEle1 scf7180000491201:735821-736008 - GAAATTATCATGGATATTCATCA---AGATA--TTT-TAAAAGCTT----------TT---G------CAAT---GTACACAAACATTTG-CAGGCGGGGTGGTGCGTCAATATATTTTG-----TTTTT-------------ATCTATATTGCACACTTCCCGGCCTATAAATGCACAGTGTTT-CGACT---TAAATATTTGTGAAA--ACATTAAATTATATA----ATTTTATTTG------------------------GACGT
droRho1 scf7180000780104:81913-82102 - GAAATTAACATGGATATTCTTCG---ATATT----T-GTAAAGTTC----------CT---G------GCAGT--ACACACAAACATTTG-TAGGCGGGGTGGTGCGTCAATATATATATGTCG-TTTTT-------------ACCTATATTGCACACTTCCCGGCCTCTAAATGC-CAGTGTTT-CGACA---TAAATATCTGTGCAA--GCATCAAATTACATA----ATTTAATTTG------------------------GTTAT
droFic1 scf7180000454039:1775878-1776060 - AGTAATGCACTGGCTATTCATCA---A------------TTAT-TT----------AT---G------CAAAT--GCACAAAAACATTTG-CAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTTCT-------------AACTATATTGCACACTTCCCGGCCTATAAATGCGTATTGTGCTCACCT---AAAATATCTGTGAAA--TCAAAAAAATAA-TT----ATGTAATTTA------------------------TTT-T
droKik1 scf7180000302471:941449-941581 - TATAATATTCAGACTGATCAACA---G------------AATTTGCGTTTTTGTTTTGGGTA-------AAA--TATTACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGT-GAT------TTTG-------------ATTCATATTGCACACATACCGGCCTGATAATGTC--------------------------------------------------------------------------------------------
droAna3 scaffold_13266:4133000-4133193 + dan-mir-310 Known_mirbase GATGATCTCCGGCGCT--CGTCATCTGTGA-----C-TAAAAGTGC----------GA----AAATAGCA-A----AACATAAACACTTG-CAGGACGGGGAGCGTGACAATATATATAT-----TTTAT--A---------AACATATATTGCACACCTCCCGGCCTATAAGTGTA-AATGTTC-CTACAGGTAAAACTTCTAAGGAAAAACTTCATTTTTGAGA----AGCTCAGAAT------------------------TTA-T
droBip1 scf7180000396427:2575716-2575900 + GATAATATCTGGCATT--CGTCATCTGTGAGTCTGT-GAAAAGTGC----------GC---GAAATATC-AA----AACATAAACACTTG-CAGGACGGGATGTGTGACAATATTTTAAT-----TATTA------------AACAAATATTGCACACCTCCTGGCCTTTAAATGTA-AATGTTT-CTACT------------GCCGAA--GGAAAAACTTCATTT----TCGTAGCTCG------------------------CAT-T
dp5 3:8679803-8679811 + dps-mir-311 Known_mirbase GAAAGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:2566808-2566910 + ACA-----------------CCA---A------------CATTTGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATATACATACATAGTTTA-------------AAAAATATTGCACACTTCTCAGACTACAAATGTGAACTGTCT-GGTCT---TCAA-----------------------------------------------------------------------
droGri2 scaffold_15245:17564461-17564548 + TA--------------------------------------------------------------------------------ACCATTTT-CAGGATGGAAGCTGTGACAATATGTAGGT-----T-TTAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATG----------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GAAAATATCAAGAATTAGCATCG---AAAAAGAAAAATAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTGTATTTAC-----TTCTT-------------AACTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................22112571.0012571121561034956
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................2112018.0020181803518624
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................211731.00731731000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................231446.004464212203
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................201194.001941197653
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................241154.001541260262
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20182.008281010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................23180.008074240
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................25177.007770070
............................................................................................AGGACGGGTCGTGTGTCAGTGTA..........................................................................................................................................................23171.007160524
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................20148.004846020
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................22143.004331075
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22124.002424000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................23121.002121000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................26115.001514010
....................................................................................................................................................TATTGCACACTTCCCGGCCTG....................................................................................................21115.001514010
............................................................................................AGGACGGGTCGTGTGTCAGTGT...........................................................................................................................................................22115.001512111
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23113.001313000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1918.0086020
.....................................................................................................................................................ATTGCACACTTCCCGGCCT.....................................................................................................1918.0088000
............................................................................................AGGACGGGTCGTGTGTCAGTG............................................................................................................................................................2117.0076001
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................2217.0076001
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................2317.0077000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................2716.0064020
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTT..................................................................................................2216.0066000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................1816.0066000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................2315.0054010
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................1915.0055000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA................................................................................................2414.0044000
.............................................................................................GGACGGGTCGTGTGTCAGTGTA..........................................................................................................................................................2214.0044000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTA...................................................................................................2114.0044000
.............................................................................................GGACGGGTCGTGTGTCAGTGT...........................................................................................................................................................2113.0033000
......................................................................................................................................................TTGCACACTTCCCGGCCTT....................................................................................................1913.0032010
............................................................................................AGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2013.0033000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTT....................................................................................................2213.0033000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................2113.0030030
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTG...................................................................................................2113.0033000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTC...................................................................................................2113.0033000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................1812.0022000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................2412.0021010
.......................................................................................................................................................TGCACACTTCCCGGCCTT....................................................................................................1811.0011000
............................................................................................AGGACGGGTCGTGTGTCAGTGTAAAA.......................................................................................................................................................2611.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTCTG................................................................................................2511.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTGGC................................................................................................2511.0011000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTC..................................................................................................2211.0011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................2111.0010010
............................................................................................AGGACGGGTCGTGTGTCAGTGTT..........................................................................................................................................................2311.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................2411.0011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................2311.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC.................................................................................................2411.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCC.....................................................................................................2011.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTAT..................................................................................................2311.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................2011.0010010
droSim2
GAAAATATCAAGAATTAGCATCG---AAAAAGAAAA-AAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTATATTTAC-----TTCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................22125506.0025506322336450721599026582736353336831506147911861606011
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................2115419.0054192333915815111440239694773134944196525000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................2512995.002995012524910192171144686527882000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................2312479.00247907302753791415514568754853754863000
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................2011872.0018721288480830237357206117184744111000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................2411708.0017080262313472928348847236484617000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1911693.00169307190142249891920137102000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................2611019.0010190046600104845002564001000
............................................................................................AGGACGGGTCGTGTGTCAGTG............................................................................................................................................................211606.006060000009415235210067237000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................181432.00432016026211104152796000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................211337.00337000258310529928310000
....................................................................................................................................................TATTGCACACTTCCCG.........................................................................................................161241.002410000001014235000000
............................................................................................AGGACGGGTCGTGTGTCAGTAT...........................................................................................................................................................221226.0022600277040000135701000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................221216.0021601323008108650101546000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................271210.002100012400292081550000000
............................................................................................AGGACGGGTCGTGTGTCAGT.............................................................................................................................................................201193.00193008315127468966415000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................231149.0014901226001171321129443000
............................................................................................AGGACGGGTCGTGTGTCAGTA............................................................................................................................................................211118.001180021502111052215000
............................................................................................AGGACGGGTCGTGTGTCAG..............................................................................................................................................................19162.00620001370271010004000
....................................................................................................................................................TATTGCACACTTCCCGG........................................................................................................17162.0062000000696635000000
............................................................................................AGGACGGGTCGTGTGTCAGTATA..........................................................................................................................................................23161.0061000461000050000000
............................................................................................AGGACGGGTCGTGTGTCA...............................................................................................................................................................18152.00520000230580212002000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................18146.0046000000000045100000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20144.0044000298100111102000
...................................................................................................................TTTAC-----TTCTT-------------AGCTA.........................................................................................................................15141.004100000015121130000000
....................................................................................................................................................TATTGCACACTTCCC..........................................................................................................15135.0035000000000035000000
............................................................................................AGGACGGGTCGTGTGTC................................................................................................................................................................17133.0033000000670020000000
.....................................................................................................................................................ATTGCACACTTCCCGGCC......................................................................................................18131.0031000030000001000000
............................................................................................AGGACGGGTCGTGTGT.................................................................................................................................................................16130.0030000000110028000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23124.0024000200000020119000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................23124.0024000212000100000000
............................................................................................AGGACGGGTCGTGTGTCAGTATAAA........................................................................................................................................................25124.0024000100000023000000
............................................................................................AGGACGGGTCGTGTGTCAGTAA...........................................................................................................................................................22123.0023000200000217101000
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................20121.0021000150002010003000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................23120.0020004110000022100000
............................................................................................AGGACGGGTCGTGTGTCAGTATAA.........................................................................................................................................................24120.0020000200000018000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCT.....................................................................................................19119.0019000313100001100000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................23118.001800010023620103000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22117.0017000113110010000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................24116.001600020001430303000
....................................................................................................................................................TATTGCACACTTCCCGGCCTC....................................................................................................21116.0016111100001011000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAAA.............................................................................................28116.001600060031500010000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................22114.001402210001123110000
........................................................................................................................................................GCACACTTCCCGGCCTT....................................................................................................17113.0013000000000211000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................21113.001300010010511202000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA................................................................................................24113.0013000110000110000000
.................................................................................................GGGTCGTGTGTCAGTATA..........................................................................................................................................................18112.0012000000000012000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTG....................................................................................................21111.001100440010001100000
............................................................................................AGGACGGGTCGTGTGTCAGTGA...........................................................................................................................................................22111.001100000043210001000
....................................................................................................................................................TATTGCACACTTCCCGGCCC.....................................................................................................20111.001105500000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTG...................................................................................................22110.001000020000005021000
............................................................................................AGGACGGGTCGTGTG..................................................................................................................................................................15110.0010000000000010000000
............................................................................................AGGACGGGTCGTGTGTCAGTT............................................................................................................................................................2119.00900000000000009000
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................1919.00900032000003001000
..........................................................................................................................................................ACACTTCCCGGCCTTT...................................................................................................1618.00800000000008000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTT....................................................................................................2217.00700010000000006000
....................................................................................................................................................TATTGCACACTTCCCGGCCG.....................................................................................................2017.00701500000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT.................................................................................................2417.00700000000100006000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................2417.00700310000210000000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................2017.00700000000302011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................2115.00500000000002003000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTT..................................................................................................2215.00500010000000004000
........................................................................................TG-CAGGACGGGTCGTGTGTCAG..............................................................................................................................................................2215.00500000002210000000
........................................................................................................................................................GCACACTTCCCGGCCT.....................................................................................................1615.00500000000005000000
.................................................................................................GGGTCGTGTGTCAGTAT...........................................................................................................................................................1715.00500000000005000000
....................................................................................................................................................TATTGCACACTTCCCGGCA......................................................................................................1915.00500000011110001000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAAA...............................................................................................2514.00400040000000000000
........................................................................................TG-CAGGACGGGTCGTGTGTCA...............................................................................................................................................................2114.00400000020010001000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTTA..................................................................................................2414.00400000000000022000
........................................................................................................................................................GCACACTTCCCGGCC......................................................................................................1514.00400000000004000000
...............................................................................................ACGGGTCGTGTGTCAGTAT...........................................................................................................................................................1914.00400000000004000000
..................................................................................................GGTCGTGTGTCAGTATA..........................................................................................................................................................1714.00400000000004000000
........................................................................................TG-CAGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2314.00400000003100000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAG..............................................................................................................................................................2114.00400000012010000000
............................................................................................AGGACGGGTCGTGTGTCAGTATAAAA.......................................................................................................................................................2613.00300000000003000000
............................................................................................AGGACGGGTCGTGTGTCAGG.............................................................................................................................................................2013.00300200000001000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2213.00300000021000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAA.................................................................................................2213.00300000000200001000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................2313.00300000001110000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAACA...............................................................................................2613.00300000000210000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTTAA.................................................................................................2512.00200010000000001000
........................................................................................TG-CAGGACGGGTCGTGTGTCAGTG............................................................................................................................................................2412.00200000001000001000
.........................................................................................................................................................CACACTTCCCGGCCTTT...................................................................................................1712.00200000000011000000
...................................................................................................................TTTAC-----TTCTT-------------AGCTAA........................................................................................................................1632.00600000021120000000
.................................................................................................GGGTCGTGTGTCAGT.............................................................................................................................................................1512.00200000000002000000
.............................................................................................................................................................CTTCCCGGCCTTTAAA................................................................................................1612.00200000000011000000
................................................................................................CGGGTCGTGTGTCAGTAT...........................................................................................................................................................1812.00200000000002000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT...............................................................................................2612.00200200000000000000
..................................................................................................GGTCGTGTGTCAGTA............................................................................................................................................................1512.00200000000002000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTG...................................................................................................2112.00200020000000000000
dm3
GAAAATATCAAGAATTAACATCG---AAAAGTGAAA-AAAAAGTGT----------TT---G------CGAA----AACATAAACATTTG-CAGGGCGGGTCGTGTGTCAGTGTATTTAT-----ATCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACA---TTTAAATCTGTGAAA--TCGTAAAATTATAAA----AATCCAGTTG------------------------CGC-TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................221478114.0047811400006274482887718013240000000882248316580000024171030621610799465730903684287033659149265187864050479928400010769280000000000000000069533428713411361104891087215116445710748517152206357813744622175586214814346882210569020451402180103130142116101458164110704790789155747875862397464872311877448160671146300000000000132602000131924010500000032223444294306150010112937211120326432301410000020581304169300457013945040196471494351349285602618061823033400004743014301215211218904500118000000013201524100048611011253223971263596173000490200008925414253375933587546247301767105081625062004725400001164354150135103207
............................................................................................AGGGCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................23130376.0030376000002000000000000001014300000000000091711815318101421224115123742130000000000000000000000000000401430000000502200011000000307900000000000000000000001132400100040114761274773866962600000000000000000000000000000000192212180011063000000178300130000002713563759299381855306439000300002000000000006000010000000020013400080240335232355776448187346240011010000980090013055368329533398100365018591931100910031042400513232931392010100
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................21120055.00200550000232627111012000000004161763300000000001325294031471039522552322344045423619000511000000000000000000000026812517113644502416011455673802791460046259619831082133500100000000041207100203263167053473531293310161202419200000000000011030023000000000000389479922300360263300000102100000000012619028918893316107912961122225513492724100200008506001009001803003000000003101270004912619504814343128005000000730010219562636410130073775700040020000003939414000020
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................23113263.001326300001643188033610000000292668000000000071517291219214712143511726101021110009530000000000000000000000441173142977521022223423776794101937191410410310972326012081488002000000010110000161610122528401261014331139960000000000012000015030002000000410616121160004822725100005180001000001711417457345755017461241110619950000200023040000080090000000000000000100001854714186913520000000008113001142715226022004850480000000000000331335000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................2417612.0076120010324331520172000000007528000000000010132251112083541508112572000401000000000000000000000045528317273661000211308235357415151661015798616601133228500000000000010000014020002930711342426157480000000000003010013000001000000349122350001809140000011250000000001310266440231157254123742199500000000100200000000500000000000000000000026731720605250000000006810001410814400100243034000000000000041831000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................2216059.0060590000000200010000000037110000000000054144232222105008610000000000000000000000000000110050000000304000000000001022000000000000000000000020013005362612211810061331100000000000000000000000000000000050442010601200000371301001000011015788811637917220000000010000000000000000000000000000440001536211497551157952041067000000000440100115697138002120327522021402322001207100000196113300000
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................2015361.0053610000004330040000000026143020000000000132129159103822927112111914780003300000000000000000000000241729105400102102531213004682002850115152153010000000000004017200000835373616201161689341314600000000000100000110100000000001117261031010042011400000104000000000425614881851061140175159449155417000200000205000009004020000000000020065200406823594814746130005010000611000112229174510004327160002006000000121053000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................2315001.005001000002813000301000000202164000000000012414410313616720310000000000000000000000010000481925692001100019111200015060049162520151158000000000000100000010000094165051310124100000000000000100000000010000000292223000609000000000000000007161339870230848631868445576000001000010000000000301000000000001002000043224635004000000900000233800010016810000000000000000001000100
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................2514329.004329000001133000000000000146000000000001251538193211303201200000000000000000000000000000747511315200011101021860032030002018376113070000000000000000000050000019963112190611300000000000001200000100000000000001161110000401000000719000000000300021420124912021612802526810000000010010000000030000000000000000000002252571535214000000000231000167516100000432854000000000000012326000000
............................................................................................AGGGCGGGTCGTGTGTCAGTG............................................................................................................................................................2114251.0042510000001000010000000012820000000000234112510074433650620311000000000000000000000000000010000000000000000000000000200100030000000000000000000021101543518712222932263163311600000000000000000000000000000000459220037243000002945112050001092201617231110345100000000032000000000000200000000000000500004219256239502898039000001000039103001754803422131200656225240000910131700020223241518100000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAA.........................................................................................................................................................2411730.00173000000000000000000000010000000000000001010000000100140000000000000000000000000000020003000001010100000000000000100000000000000000000000000000210038010012361000000000000000000000000000000000001300030400000201001000000891050201154000000000000000000000000000000000000000000542743922963311512600000000006000003122399000000535761000000300001002212000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................2111386.00138600000033000000000000010300000000000000021124011121232000100000000000000000000000010102250000000304000020000001020110500000000000000000001111201040201101001030000000000010010000000000000000102000000005000000000000000031001411221295612313522525500010000000000000000000000000000000002000021930110190000000005000000113000000530000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1911177.001177000000000000000000002403100000000001330120210110210001000560000000000000000000000040013001000020430001000001000300020000000000000081290293000051201200132021222300000000000000000000000000000000913000030200000010000000000141231442693837465525320000000010000000010010000000000000000110001412034140000000005000021000100000110000000000000000211000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATT........................................................................................................................................................251983.00983000000000000000000002200000000000004100001000113000120000000000000000000000000000000030000000000000000000000000100200000000000000000010000000011655272007540000000000000010000000000000000000034000101102000120000000000131105131861080000000000000000000000000000000000000000002310823702918320131000000000400000041982000000153058000000300000000452000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAAA........................................................................................................................................................251949.0094900000000000000000000001000000000000520100104000000111000000000000000000000000000020000000000000000000000000000000010000000000000000000000000210036311112352000000000000000000000000000000000006000030130000015002100000080201020310100000000000000000000000000000000000000000011761978121005600000000008000004524120011000123647900000020000000116138100000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................261833.008330000001000000000000011300000000000002340022101000000000000000000000000000000000009000140000000101100010000003000310260000000000000000000000000253000303000000000000000010000000000000000000021010000012000004500000000000003342731245273371550000000000000000000000000000000000000000002601280100000000030000101050000005410000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................201691.0069100000000000000000000101200000000000000000000010000000000000000000000000000000010013111230000001409100000000052023800900000000000000000000000001000010000000000000000000000000000000000000000000000000120000001000000000000058519462576779120000000000000000000000000000000000000000000120102000000000000000000200000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................181653.006530000000000000000000014011000000000001101100000002102100006300000000000000000000000000010000000001100000000001000000000000000000000042262910000071100014000000000000000000000000000000000000000032100001000000000000000000013605101790000000000000100000000000000000000000000000000121201230000000000000000020000000141000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................221498.0049800000112401030100000001230000000000001020011002006112500000000000000000000000000007443100111000015100010000043001200600000000000000000001000002002020213141200000000000000000000000000000000031100010100000001000000000400125371835243233710000000000010000000010000000000000000010001632112700000000020000010430000004023000000000000000120000000
............................................................................................AGGGCGGGTCGTGTGTCAGT.............................................................................................................................................................201489.0048900000000000000000000001000000000003500010000000011001000000000000000000000000000000301100001000010000000000000000000000000000000000000100000031000122202203000000000000000000100000000000000000200112000000010002300001712310100101100010000100000000000000000000000000002000083344383611740000000001000000610390200003714130002002200000002301000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................221483.0048300000011121004000000000022200000000000011240002020110222000000000000000000000000000012613290000010211200100100044101300400000000000000000000000001100001110001000000000000000000000000000000000412000000200000010000000000010115441530134525660000000000000000000020000000000000000000006710151200000000020000013010000002820000000000000000100000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................231330.00330000000100000000000000009000000000000001000111000400000000000000000000000000000000531315000010170100000000000201330050000000000000000000000000010001000001000000000000000000000000000000000000000001010000001000000000022002135242425431937000010000000000000000000000000000000000000120104030000000000000000211000000421000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................241314.00314000001010001000000000001400000000000000000000100021000000000000000000000000000000010314120000000800270000110000300720018000000000000000000000000004000000000003000000000000000000100000000000001701600002030000000200000000001007216612311932000020000000000003000000000000000000010000000102000000000000000000011000000010000000000000000100000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAAAA.......................................................................................................................................................261254.00254000000000000000000000100000000000001200100010010000200000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000331400051200000000000000000000000000000000000000000070000050010000000122011002002000000000000000000000000000000000000000000212163193900000000000000001621000000666160000001000000062183000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................271247.0024700000000000000000000000000000000000000010000000000000000000000000000000000000000004005000000000000000000000000000000000000000000000000300000110000000000000000000000000000000000000000000002000000000000001100000000000007818514100851000000000000000000001000000000000000000000030102010000000000000000002000000106000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAG..............................................................................................................................................................191210.0021000000000000000000000010000000000001300010010010000101000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000222010130000000000000000000000000000000000100000000000001000000100009133000001001000000000000000000000000000000000010000000312411283250000000001000000432001000019810001200700000001101000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTC..........................................................................................................................................................231172.001720000000000000000000000000000000000001100011000100310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000011221000000000000000000000000000000000001000000000000200000000000000000000000000000000000000000000000000000000000000004302953232500000000010000022311011000012000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................231145.0014500000000000200000000000100000000000000001010000000011000000000000000000000000000000000100000002010001000001000010104000000000000000000000000000010000001000000000000000000000000000000000002130000200000000000000000001400720792201116000000000000000000000000000000000000000000110211000000000002000000000000000101000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT.................................................................................................241139.001390000000100000000000000040000000000100000000001000000000000000000000000000000000001000210000001003000003000020010000000000000000000000000000000000100000000000000000000000000000000000000004050000000000000000000000000100726495211118000000000000000001000000000000000000000000000000000000000000000000012100000010000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTATC................................................................................................251116.0011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000110000000008924000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCA...............................................................................................................................................................18199.00990000000000000000000000100000000000000000000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010101000000000000000000000100000000000001010000000000000000000000004420000000000000000000000000000000000000000000000000000516153210000000001000001227200000736000100300000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTG...................................................................................................22193.00930000008221020000000000030000000000100001000000000100400000000000000000000000000006100400200000010000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100030924118000000000000000000000000000000000000000000220010100000000000000000001000000600000000000000000000000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23184.00840000001001010000000000080000000000000002020000000200000000000000000000000000000005121130000000111000000001015000000300000000000000000002000002000000000000000000000000000000000000000000000000000000000000000000000000000014213349000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAT.........................................................................................................................................................24184.008400000000000000000000010000000000000010000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000001100000000042000101011100000000000000000000000000000000000000000033074111140000000000000001316000000143000000100000000101000000
.................................................................................................GGGTCGTGTGTCAGTGTA..........................................................................................................................................................18184.00840000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000002242130175170000000000000000100000000010000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGA...........................................................................................................................................................22181.00810000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000600000000002000000001010000000000000000000000000000000000000000001100817340000000001000000229000100827000000200000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC.................................................................................................24178.007800000000000100000000000100000000000000000110100021000000000000000000000000000000000035000000010010000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934413410000020000000000000000000000000000000000000200000000000000000000003010000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGC...........................................................................................................................................................22170.007000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000001328116190000000000000000126000000113000000000000000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................20165.0065000000000000000000001102000000000000000001001000000000000000000000000000000000000303050000000000100000000000000000000000000000000000000000001300001001101000000000000000000000000000000000210100030000000000000000000010017101213000000000000000000000000000000000000000000112104110000000002000000000000000101000000000000000000000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22161.00610000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000010000000000020000000000000000000000000000000010000001000000000000000000000000000000000000000000000001000000000000000000000443281167000000000000000000000000000000000000000000020001010000000001000000001000000002000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTT..........................................................................................................................................................23157.0057000000000000100000000000000000000000000000101000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000101100010000000000000000000000000000000000000000000000000000000030000000000000000000000000004000000000000000000000000000000122204020000000000000000038010000733000000300000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAAA.............................................................................................28154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252124212000000000000000000000000000000000000000000000010010000000000000000000000100200000000000000000000000000
.............................................................................................GGGCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................22151.00510000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000100000010000000000000000000000000000000000000000000000500030800000000000000001514000000044000100000000000100000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20147.00470000000000000000000000000000000000000000000001000000000000000000000000000000000000000200000000000000000000000000000000000000000000001000000020000000001000000000000000000000000000000000000000000000000000000000000000001412213535000000000000000000000000000000000000000000011000010000000000000000000000000010000000000000000000000000
.............................................................................................GGGCGGGTCGTGTGTCAGTG............................................................................................................................................................20142.0042000000000000000000000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000030010000000000000000000000000000000000000000000000000000000000000000420000000000000000000000000000000000000000000000000000010000000000000000000000139000000225000000400000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................24141.0041000000020000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000004000000000000000100000000000000000001000020000000001000000000000035131214000000000000000000000000000000000000000000000001000000000003000000000000000002000000000000000001000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATTA.......................................................................................................................................................26139.0039000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000040003040000000002000000033000000428000000000000000020000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................21139.00390000001000010000000001015000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000001010010000000000000000000000000000000000000001100010000000000000000000000022000301000000000000000000000000000000000000000000100100110000000000000000100000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTGT.................................................................................................24137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904000020100000000000000000100005020421000000000000000000000000000000000000000000001101000000000000000000000001000001000000000000010000000000
...............................................................................................GCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................20135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000811261100000000000000000000000000011000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTG..........................................................................................................................................................23134.0034000000000000000000000000000000000000000000200000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000370305030000000000000000001000000122000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................21134.0034000000000000000000000002000000000000000000000000000000000000000000000000000000000001050000000001000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033211533000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TG-CAGGGCGGGTCGTGTGTCA...............................................................................................................................................................21133.0033000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010100000000000000000000000000000000000000000000000000020304030000000001100000001000000042000100110000000041000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAA.................................................................................................22131.0031000000000000000000000000000000000000001000000000001000000000000000000000000000000130010000000200000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100011012425000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................23131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000510000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032123552000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTTT................................................................................................25131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151026610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................18130.0030000000000000000000001300000000000000011000000000000100000000000000000000000000000100400000000000000000000001000000000000000000000000000000000000020000002000000000000000000000000000000000000000000000000000000000000200100111000000000000000000000000000000000000000000000001101020000000000000000000000000020000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAT................................................................................................25130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000100000000000300000000000000000000000000000000000000000000000000000000000000000000000201000000100000000000000000000010114534000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTC....................................................................................................21127.0027000000000003000000000000000000000000100000000000100000000000000000000000000000000000100000000000000000000200000000200000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000110023120101000000000000000000000000000000000000000000000000100000000001000000110000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATA........................................................................................................................................................25126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010007000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012040000000001000000001000000222000000000001000010000000
.............................................................................................GGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000010000020002020000000000000000004000000163000000100000000010000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................23124.0024000000000000000000000001000000000000000000000000000000000000000000000000000000000000050000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000002001633000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAGGGCGGGTCGTGTGTCAGTG............................................................................................................................................................22122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010101040000000002000000001000000103000000100000000020000000
......................................................................................................................................................TTGCACACTTCCCGGCCTT....................................................................................................19121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005110342000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAG................................................................................................25121.0021000000000000000000000000000000000000000000000000010000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022101214000000000000000001000000000000000000000000000003000000000001000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTC................................................................................................................................................................17121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001130500110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTT............................................................................................................................................................21121.0021000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000021000000000000000000000000000000000000000000000000000000000000000000200000100001000000000000000001000000000000000000000000000200010000000000000001042000000010000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT...............................................................................................26120.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000003002704000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAC................................................................................................25120.0020000000000000000000000000000000000010000001000000100000000000000000000000000000000000000000000200000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000317000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCT......................................................................................................19119.0019000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000010000000000000000000000003500000000000000000000000000000000000000000000000000000202000010000000000000000000000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAC.........................................................................................................................................................24118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000050002010000000000000000000000000122000000100000000000000000
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................19118.0018000000000000000000000000000000000000000001000000100000000000000000000000000000000000030000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130111000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGG...........................................................................................................................................................22118.0018000000000000000000000000000000000000000000100000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010315010000000000000000020000000000000000100000000000000000
.........................................................................................G-CAGGGCGGGTCGTGTGTCAG..............................................................................................................................................................21117.0017000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000040400010000000000000000000000000023000000000000000000000000
...........................................................................................CAGGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................23117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000110114050000000000000000000000000011000000000000000000000000
droEre2
GAAAATATCAAGGACTTACATCA---A------------AAAGT-C----------TT---G------CAAA----TACACAAATATTTG-CAGGACGGGTCGTGTGTCAATGTATTGAT-----CTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CAACT---TGAATATCTGTGAAA--TCATAAAATTATATA----A-TCAATTTG------------------------GAC-TSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGCCCTTT...................................................................................................22113097.0013097108042134113116110
....................................................................................................................................................TATTGCACACTTCCCGCCCTT....................................................................................................2111101.001101945117025950
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTT...................................................................................................211901.009018732701000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA.................................................................................................241334.003343102202000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTA..................................................................................................231325.003252793808000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA................................................................................................251197.00197195200000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTC...................................................................................................221150.00150514500000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTT..................................................................................................23172.007260821010
....................................................................................................................................................TATTGCACACTTCCCGCCCT.....................................................................................................20170.0070531300130
.....................................................................................................................................................ATTGCACACTTCCCGCCCTT....................................................................................................20169.006969000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTT...................................................................................................20168.006863500000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA...............................................................................................26153.005352000001
............................................................................................AGGACGGGTCGTGTGTCAATGTA..........................................................................................................................................................23150.005040000505
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTG..................................................................................................23126.002626000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................27126.002626000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTA..................................................................................................22125.002525000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA.................................................................................................23125.002525000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTA...................................................................................................22123.002320300000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA................................................................................................24122.002222000000
............................................................................................AGGACGGGTCGTGTGTCAATGT...........................................................................................................................................................22117.001711110310
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTT...................................................................................................23116.001615100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTC..................................................................................................23113.001310102000
............................................................................................AGGACGGGTCGTGTGTCAATG............................................................................................................................................................21111.001110000100
.......................................................................................................................................................TGCACACTTCCCGCCCTTT...................................................................................................1919.0098100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2818.0088000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTT..................................................................................................2217.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTG....................................................................................................2117.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTA....................................................................................................2117.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCC......................................................................................................1917.0074300000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA...............................................................................................2517.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG.................................................................................................2415.0055000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTC....................................................................................................2115.0050500000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTA...................................................................................................2114.0044000000
.............................................................................................GGACGGGTCGTGTGTCAATGTA..........................................................................................................................................................2214.0044000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTG...................................................................................................2214.0044000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTC...................................................................................................2114.0040400000
............................................................................................AGGACGGGTCGTGTGTCAATGTATTGAT-----................................................................................................................................................2814.0040000004
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTG...................................................................................................2114.0044000000
....................................................................................................................................................TATTGCACACTTCCCGCC.......................................................................................................1814.0044000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCT.....................................................................................................1913.0033000000
.............................................................................................GGACGGGTCGTGTGTCAATGT...........................................................................................................................................................2113.0033000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTG..................................................................................................2213.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG.................................................................................................2413.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAC................................................................................................2513.0033000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAA.................................................................................................2213.0033000000
......................................................................................................................................................TTGCACACTTCCCGCCCTT....................................................................................................1913.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT.................................................................................................2413.0032100000
.............................................................................................GGACGGGTCGTGTGTCAATG............................................................................................................................................................2012.0022000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................2612.0022000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTGG.................................................................................................2312.0022000000
........................................................................................................................................................GCACACTTCCCGCCCTTT...................................................................................................1812.0022000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTA..................................................................................................2412.0022000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC.................................................................................................2412.0022000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTAAA................................................................................................2611.0011000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTGGC................................................................................................2411.0011000000
............................................................................................AGGACGGGTCGTGTGTCAATTA...........................................................................................................................................................2211.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAT..............................................................................................2711.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAC..............................................................................................2711.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTC.................................................................................................2411.0011000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2711.0011000000
............................................................................................AGGACGGGTCGTGTGTCAATGA...........................................................................................................................................................2211.0010001000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTGG..................................................................................................2311.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCAC....................................................................................................2111.0010100000
........................................................................................................................................................GCACACTTCCCGCCCTTTAAAA...............................................................................................2211.0011000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTTAA.................................................................................................2111.0011000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAATGT...........................................................................................................................................................2411.0011000000
droYak3
GAAAATATCAAGGACTTGCATCG---A------------AAAGTGC----------TT---G------CAAA----TACACAAACATTTG-CAGGACGGGTCGTGTGGCAGTGTATTGAT-----TTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CGACT---TGGATATCTGTGAAA--TCATAAAATTATATA----ATTCAATTTG------------------------GGC-TSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGCCCTTT...................................................................................................22130388.0030388019757101714463920000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTT...................................................................................................2112170.0021700201915100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTT....................................................................................................2111594.0015940907611740020000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTC...................................................................................................2211155.00115506114900000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTA..................................................................................................231522.005220387125100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA.................................................................................................241337.0033702626870000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTT..................................................................................................231256.0025611807050000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTT...................................................................................................201174.0017401344000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA................................................................................................251155.0015501441010000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTC....................................................................................................211107.001070010700000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTT....................................................................................................201106.001060931300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCT.....................................................................................................20199.00990524520000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTA..........................................................................................................................................................23186.0086084200000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTG...................................................................................................22152.0052052000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTT...................................................................................................23149.0049047200000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTA...................................................................................................22145.00450311310000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTG..................................................................................................23141.0041038300000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTT...................................................................................................19140.00400291100000000
........................................................................................................................................................GCACACTTCCCGCCCTTT...................................................................................................18137.0037030700000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTA..................................................................................................22134.0034033100000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA.................................................................................................23131.0031028300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT.................................................................................................24126.0026024110000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA...............................................................................................26126.0026025000100000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTT..................................................................................................22125.0025022300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTC..................................................................................................23124.00240141000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGT...........................................................................................................................................................22120.0020014500010000
....................................................................................................................................................TATTGCACACTTCCCGCCC......................................................................................................19119.0019010810000000
............................................................................................AGGACGGGTCGTGTGGCAGTG............................................................................................................................................................21115.001509310020000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................27115.0015015000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCC.....................................................................................................20112.0012101100000000
.............................................................................................GGACGGGTCGTGTGGCAGTGTA..........................................................................................................................................................22112.0012012000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA................................................................................................24112.0012012000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTT.................................................................................................24110.001009100000000
......................................................................................................................................................TTGCACACTTCCCGCCCTT....................................................................................................19110.001009100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2819.00908000100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG.................................................................................................2419.00909000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC.................................................................................................2419.00907200000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTC...................................................................................................2119.00901800000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAT.................................................................................................2316.00606000000000
....................................................................................................................................................TATTGCACACTTCCCGCC.......................................................................................................1816.00604200000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTG..................................................................................................2215.00505000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAAA........................................................................................................................................................2515.00502000000003
............................................................................................AGGACGGGTCGTGTGGCAGTGC...........................................................................................................................................................2215.00500500000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTC...................................................................................................2015.00500500000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAA.................................................................................................2214.00404000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTA..................................................................................................2114.00403100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG.................................................................................................2414.00404000000000
.............................................................................................GGACGGGTCGTGTGGCAGTGT...........................................................................................................................................................2114.00404000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGT.................................................................................................2414.00404000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA...............................................................................................2513.00303000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTT..................................................................................................2113.00302100000000
.......................................................................................................................................................TGCACACTTCCCGCCCTT....................................................................................................1813.00302100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTG.................................................................................................2413.00303000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTT....................................................................................................2213.00303000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAA.........................................................................................................................................................2413.00303000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTCT.................................................................................................2413.00303000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCT.....................................................................................................1912.00201100000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTC..................................................................................................2212.00202000000000
......................................................................................................................................................TTGCACACTTCCCGCCCT.....................................................................................................1812.00202000000000
........................................................................................................................................................GCACACTTCCCGCCCTTTT..................................................................................................1912.00201100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTG....................................................................................................2112.00201100000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTAAA................................................................................................2612.00202000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTA..................................................................................................2412.00202000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAAA................................................................................................2312.00202000000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTTA..................................................................................................2012.00202000000000
............................................................................................AGGACGGGTCGTGTGGCAGT.............................................................................................................................................................2012.00220000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTC.................................................................................................2412.00202000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAT.........................................................................................................................................................2412.00202000000000
droEug1
GAAAAGATTAGGGATATTCTTTA---A------------AAAGTGA----------GT---G------CACG----TACACAAACATTTG-CAGGTGGGGTTGTGGGCAAATATATTTAT-----TTTTC------------AAGTTATATTGCACACTTCCCGGCCTTTAAATGTCCAGTGTTT-CGACCC--TAAACATCTGTGAAA--TCATAAAATTATATA----ATTTCATATT------------------------CGC-TSizeHit CountTotal NormTotal
No Reads
droBia1
CTAAACATCAAGGGCATTCCTCA---A------------AAAGCGC----------CT---G------CAAA----TACACAAGCATTTG-CAGGCCGGGTCGCGTGCCAATGTATTGAC-----T-TCA-------------GGCTATATTGCACACCTCCCGGCCCATAAATGCAAGGTGTTT-CAACA---AAAACATCTGAG--G--TTGTGAAGTTA--------ACTCCATATTTGTTATATTATATATTGTACATTTTAT-TSizeHit CountTotal NormTotal
No Reads
droTak1
GAAAATATCAAGGGTGTTCCTCA---A------------AAAGTTC----------CT---G------CAAATACACACACACACATTTG-CAGGCTGGGTTGTGTGTTAATATATTGAT-----T-TTA-------------AGCTATATTGCACACTTCCCGGCCTATAAATGCCAAGTGTTT-CGACC---AAAATATCTGTGAAA--TCGTGGAATTACATGTATTACTTAATTTT------------------------G---TSizeHit CountTotal NormTotal
No Reads
droEle1
GAAATTATCATGGATATTCATCA---AGATA--TTT-TAAAAGCTT----------TT---G------CAAT---GTACACAAACATTTG-CAGGCGGGGTGGTGCGTCAATATATTTTG-----TTTTT-------------ATCTATATTGCACACTTCCCGGCCTATAAATGCACAGTGTTT-CGACT---TAAATATTTGTGAAA--ACATTAAATTATATA----ATTTTATTTG------------------------GACGTSizeHit CountTotal NormTotal
No Reads
droRho1
GAAATTAACATGGATATTCTTCG---ATATT----T-GTAAAGTTC----------CT---G------GCAGT--ACACACAAACATTTG-TAGGCGGGGTGGTGCGTCAATATATATATGTCG-TTTTT-------------ACCTATATTGCACACTTCCCGGCCTCTAAATGC-CAGTGTTT-CGACA---TAAATATCTGTGCAA--GCATCAAATTACATA----ATTTAATTTG------------------------GTTATSizeHit CountTotal NormTotal
No Reads
droFic1
AGTAATGCACTGGCTATTCATCA---A------------TTAT-TT----------AT---G------CAAAT--GCACAAAAACATTTG-CAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTTCT-------------AACTATATTGCACACTTCCCGGCCTATAAATGCGTATTGTGCTCACCT---AAAATATCTGTGAAA--TCAAAAAAATAA-TT----ATGTAATTTA------------------------TTT-TSizeHit CountTotal NormTotal
No Reads
droKik1
TATAATATTCAGACTGATCAACA---G------------AATTTGCGTTTTTGTTTTGGGTA-------AAA--TATTACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGT-GAT------TTTG-------------ATTCATATTGCACACATACCGGCCTGATAATGTC--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GATGATCTCCGGCGCT--CGTCATCTGTGA-----C-TAAAAGTGC----------GA----AAATAGCA-A----AACATAAACACTTG-CAGGACGGGGAGCGTGACAATATATATAT-----TTTAT--A---------AACATATATTGCACACCTCCCGGCCTATAAGTGTA-AATGTTC-CTACAGGTAAAACTTCTAAGGAAAAACTTCATTTTTGAGA----AGCTCAGAAT------------------------TTA-TSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................TATTGCACACCTCCCGGCCTAT...................................................................................................221128673.0012867319561228543853541
....................................................................................................................................................TATTGCACACCTCCCGGCCTAC...................................................................................................22126620.00266201266127000
....................................................................................................................................................TATTGCACACCTCCCGGCCTA....................................................................................................21115798.0015798320142951174324
....................................................................................................................................................TATTGCACACCTCCCGGCCTATA..................................................................................................23113540.001354029312930316010
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAA.................................................................................................2414483.0044831074229147000
....................................................................................................................................................TATTGCACACCTCCCGGCCT.....................................................................................................2013454.0034542582959228513
....................................................................................................................................................TATTGCACACCTCCCGGCCTATT..................................................................................................2311738.00173847166526000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAT...................................................................................................2111643.00164313814987000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAA................................................................................................2511287.001287137105298000
....................................................................................................................................................TATTGCACACCTCCCGGCCTAA...................................................................................................2211139.00113926106944000
............................................................................................AGGACGGGGAGCGTGACAATAT...........................................................................................................................................................221898.0089811473640071
....................................................................................................................................................TATTGCACACCTCCCGGCCC.....................................................................................................201837.0083708370000
....................................................................................................................................................TATTGCACACCTCCCGGCC......................................................................................................191593.00593145754000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAC...................................................................................................211345.0034503450000
............................................................................................AGGACGGGGAGCGTGACAATA............................................................................................................................................................211336.0033632275190100
............................................................................................AGGACGGGGAGCGTGACAAT.............................................................................................................................................................201278.002782922023060
......................................................................................................................................................TTGCACACCTCCCGGCCTAT...................................................................................................201273.00273142581000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATC..................................................................................................231232.0023202275000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTAT...................................................................................................231229.0022952195000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATA..................................................................................................221206.00206251801000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAAA...............................................................................................261185.001855111420000
............................................................................................AGGACGGGGAGCGTGACAATATA..........................................................................................................................................................231172.00172491182021
.....................................................................................................................................................ATTGCACACCTCCCGGCCTA....................................................................................................201145.00145241147000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATG..................................................................................................231130.0013031216000
............................................................................................AGGACGGGGAGCGTGACAATATAA.........................................................................................................................................................24184.008414680020
............................................................................................AGGACGGGGAGCGTGACAA..............................................................................................................................................................19180.008065516030
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAT.................................................................................................24177.00770761000
............................................................................................AGGACGGGGAGCGTGACAATAC...........................................................................................................................................................22161.00610610000
............................................................................................AGGACGGGGAGCGTGACA...............................................................................................................................................................18160.0060103911000
....................................................................................................................................................TATTGCACACCTCCCGGCCTT....................................................................................................21159.00597448000
......................................................................................................................................................TTGCACACCTCCCGGCCTAC...................................................................................................20159.00590590000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAC.................................................................................................24159.00590581000
............................................................................................AGGACGGGGAGCGTGACAATAA...........................................................................................................................................................22158.00586501010
...................................................................................................................................................ATATTGCACACCTCCCGGCCTAC...................................................................................................23158.00580580000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATAA.................................................................................................23154.00542520000
.......................................................................................................................................................TGCACACCTCCCGGCCTAT...................................................................................................19146.00460460000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAAAA..............................................................................................27143.004323164000
.....................................................................................................................................................ATTGCACACCTCCCGGCCT.....................................................................................................19142.004216260000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATT..................................................................................................22140.00402380000
....................................................................................................................................................TATTGCACACCTCCCGGCCTGC...................................................................................................22140.00400400000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTA....................................................................................................22135.00351331000
......................................................................................................................................................TTGCACACCTCCCGGCCTATA..................................................................................................21134.00340340000
....................................................................................................................................................TATTGCACACCTCCCGGCCTAG...................................................................................................22134.00347243000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATTT.................................................................................................24134.00342310100
....................................................................................................................................................TATTGCACACCTCCCGGC.......................................................................................................18131.00310247000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAG.................................................................................................24129.00292270000
....................................................................................................................................................TATTGCACACCTCCCGGCCA.....................................................................................................20128.00282224000
...................................................................................................................................................ATATTGCACACCTCCCGGCCT.....................................................................................................21127.00272250000
............................................................................................AGGACGGGGAGCGTGACAAC.............................................................................................................................................................20124.00241230000
........................................................................................................................................................GCACACCTCCCGGCCTAT...................................................................................................18124.00240222000
....................................................................................................................................................TATTGCACACCTCCCGGCCTC....................................................................................................21121.00210912000
............................................................................................AGGACGGGGAGCGTGACAAA.............................................................................................................................................................20121.00210192000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTATA..................................................................................................24120.00201190000
....................................................................................................................................................TATTGCACACCTCCCGGCCTG....................................................................................................21119.00190190000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAT................................................................................................25117.00171151000
............................................................................................AGGACGGGGAGCGTGACAATT............................................................................................................................................................21116.00162121010
......................................................................................................................................................TTGCACACCTCCCGGCCTA....................................................................................................19115.00152121000
.............................................................................................GGACGGGGAGCGTGACAATAT...........................................................................................................................................................21114.00141400000
......................................................................................................................................................TTGCACACCTCCCGGCCTATAA.................................................................................................22114.00140140000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATAAA................................................................................................24113.00133100000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAG................................................................................................25113.00130130000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAC................................................................................................25113.00131111000
droBip1
GATAATATCTGGCATT--CGTCATCTGTGAGTCTGT-GAAAAGTGC----------GC---GAAATATC-AA----AACATAAACACTTG-CAGGACGGGATGTGTGACAATATTTTAAT-----TATTA------------AACAAATATTGCACACCTCCTGGCCTTTAAATGTA-AATGTTT-CTACT------------GCCGAA--GGAAAAACTTCATTT----TCGTAGCTCG------------------------CAT-TSizeHit CountTotal NormTotal
No Reads
dp5
GAAAGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
No Reads
droPer2
ACA-----------------CCA---A------------CATTTGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATATACATACATAGTTTA-------------AAAAATATTGCACACTTCTCAGACTACAAATGTGAACTGTCT-GGTCT---TCAA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................................................TTGCACACTTCTCAGACTACA..................................................................................................211577.005775748931000
......................................................................................................................................................TTGCACACTTCTCAGACTACAA.................................................................................................221502.00502144799000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................201208.00208028110178
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................211148.00148849100081
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................231133.0013303901093
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................231122.00122280162022
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................221104.0010411962076
......................................................................................................................................................TTGCACACTTCTCAGACTACAAA................................................................................................23169.00691653000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CA...............................................................................................................................................................20163.00630810054
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................23147.004701770023
...........................................................................................TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................22144.00440305009
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................21136.003611910015
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-C................................................................................................................................................................19134.00340400030
......................................................................................................................................................TTGCACACTTCTCAGACTAC...................................................................................................20131.00313253000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTC............................................................................................................................................................22129.00290000029
.......................................................................................................................................................TGCACACTTCTCAGACTACA..................................................................................................20128.00280280000
.......................................................................................................................................................TGCACACTTCTCAGACTACAA.................................................................................................21127.00270270000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................22125.00250910015
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-T................................................................................................................................................................19223.50470000047
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTT............................................................................................................................................................22121.00213010017
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAA...............................................................................................24121.00210201000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CA...............................................................................................................................................................19115.00150002013
....................................................................................................................................................TATTGCACACTTCTCAGACTAC...................................................................................................22115.00152103000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................22114.0014152006
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAAA..............................................................................................25112.00120111000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TT...............................................................................................................................................................20311.67350000035
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................23111.0011051005
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................24110.0010210007
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CC...............................................................................................................................................................2019.009000009
...........................................................................................TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................2118.008030005
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTC............................................................................................................................................................2317.007000007
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAA..............................................................................................................................................................2017.007000007
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TC...............................................................................................................................................................2026.50130100012
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAA..............................................................................................................................................................2116.006021003
...........................................................................................TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................2016.006030003
....................................................................................................................................................TATTGCACACTTCTCAGACTACA..................................................................................................2315.005041000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CT...............................................................................................................................................................2015.005000005
........................................................................................................................................................GCACACTTCTCAGACTACAA.................................................................................................2015.005050000
............................................................................................CGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2115.005030002
...........................................................................................TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................1915.005050000
.....................................................................................................................................................ATTGCACACTTCTCAGACTACA..................................................................................................2214.004040000
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAAAA.............................................................................................2614.004040000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-A................................................................................................................................................................1914.004000004
...........................................................................................TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................2214.004000004
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2414.004040000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAA................................................................................................2213.003030000
.....................................................................................................................................................ATTGCACACTTCTCAGACTAC...................................................................................................2113.003021000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATCC.........................................................................................................................................................2513.003000003
......................................................................................................................................................TTGCACACTTCTCAGACTACG..................................................................................................2113.003300000
....................................................................................................................................................TATTGCACACTTCTCAGACTA....................................................................................................2113.003111000
......................................................................................................................................................TTGCACACTTCTCAGACTA....................................................................................................1913.003030000
......................................................................................................................................................TTGCACACTTCTCAGACTACAG.................................................................................................2213.003210000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATC..........................................................................................................................................................2413.003000003
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATCCC........................................................................................................................................................2613.003000003
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................2313.003300000
............................................................................................CGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2313.003030000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-.................................................................................................................................................................1813.003000003
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2413.003011001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CCT..............................................................................................................................................................2112.002000002
....................................................................................................................................................TATTGCACACTTCTCAGACTACAA.................................................................................................2412.002020000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTCC...........................................................................................................................................................2312.002000002
............................................................................................CGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2212.002010001
......................................................................................................................................................TTGCACACTTCTCAGACT.....................................................................................................1812.002200000
........................................................................................................................................................GCACACTTCTCAGACTACA..................................................................................................1912.002020000
.......................................................................................................................................................TGCACACTTCTCAGACTAC...................................................................................................1912.002020000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAT..............................................................................................................................................................2112.002000002
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CTT..............................................................................................................................................................2112.002000002
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................2412.002110000
......................................................................................................................................................TTGCACACTTCTCAGACTACAC.................................................................................................2212.002110000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2512.002020000
....................................................................................................................................................TATTGCACACTTCTCAGACTACAAAA...............................................................................................2612.002020000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAA...............................................................................................2312.002020000
......................................................................................................................................................TTGCACACTTCTCAGACTACAAG................................................................................................2311.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2411.001010000
...............................................................................................CTAAGTTCTGTG-CAGTAA...........................................................................................................................................................1811.001010000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAAAA.............................................................................................2511.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTA-A................................................................................................................................................................1911.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGG.............................................................................................................................................................2111.001100000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTCC...........................................................................................................................................................2511.001000001
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAAA..............................................................................................2411.001010000
....................................................................................................................................................TATTGCACACTTCTCAGACT.....................................................................................................2011.001100000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGC.............................................................................................................................................................2111.001100000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTT............................................................................................................................................................2311.001000001
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-C................................................................................................................................................................2011.001000001
.................................................................................................................TATACATACATAGTTTA-------------AAAAAT........................................................................................................................2311.001010000
.............................................................................................GTCTAAGTTCTGTG-CAGTA............................................................................................................................................................1911.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTT-.................................................................................................................................................................1811.001000001
.....................................................................................................................................................ATTGCACACTTCTCAGACTACAAAA...............................................................................................2511.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATTC.........................................................................................................................................................2511.001010000
.............................................................................................GTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2011.001010000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGA.............................................................................................................................................................2311.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAC..............................................................................................................................................................2011.001000001
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATTA.........................................................................................................................................................2411.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATG..........................................................................................................................................................2411.001010000
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATCCC........................................................................................................................................................2511.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATT..........................................................................................................................................................2411.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAAA.............................................................................................................................................................2211.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTG............................................................................................................................................................2211.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CG...............................................................................................................................................................2011.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2511.001010000
.....................................................................................................................................................ATTGCACACTTCTCAGACTACAA.................................................................................................2311.001010000
....................................................................................................................................................TATTGCACACTTCTCAGACTACAAA................................................................................................2511.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-TT...............................................................................................................................................................1940.502000002
......................................................................................................................................................TTGCACACTTCTCAGACG.....................................................................................................1820.501100000
............................................................................................................................................................ACTTCTCAGACTACAAAA...............................................................................................1820.501010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TCC..............................................................................................................................................................2130.331000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TTC..............................................................................................................................................................2150.201000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTT-T................................................................................................................................................................1960.171000001
droGri2
TA--------------------------------------------------------------------------------ACCATTTT-CAGGATGGAAGCTGTGACAATATGTAGGT-----T-TTAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATG----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................TATTGCACACCTCCCGGCCTAT...................................................................................................22120.0020200
....................................................................................................................................................TATTGCACACCTCCCGGCCT.....................................................................................................2019.00990
....................................................................................................................................................TATTGCACACCTCCCGGCCTA....................................................................................................2115.00550
............................................................................................AGGATGGAAGCTGTGACAATAT...........................................................................................................................................................2215.00505
............................................................................................AGGATGGAAGCTGTGACAATATG..........................................................................................................................................................2314.00404
....................................................................................................................................................TATTGCACACCTCCCGGCCTT....................................................................................................2113.00330
............................................................................................AGGATGGAAGCTGTGACAAT.............................................................................................................................................................2013.00312
............................................................................................AGGATGGAAGCTGTGACAA..............................................................................................................................................................1912.00211
............................................................................................AGGATGGAAGCTGTGACAATA............................................................................................................................................................2112.00202
.....................................................................................................................................................ATTGCACACCTCCCGGCCT.....................................................................................................1912.00220
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAT...................................................................................................2111.00110
....................................................................................................................................................TATTGCACACCTCCCGGCC......................................................................................................1911.00110
............................................................................................AGGATGGAAGCTGTGACAATATGT.........................................................................................................................................................2411.00101
.....................................................................................................................................................ATTGCACACCTCCCGGCCTA....................................................................................................2011.00110
............................................................................................AGGATGGAAGCTGTGACA...............................................................................................................................................................1811.00101

Generated: 10/20/2015 at 07:33 PM

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_1:14025430-14025618 - dse-mir-310 Known_mirbase GAAAATATCAAGAATTAGCATCG---AAAAAGAAAAATAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTGTATTTAC-----TTCTT-------------AACTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-T
droSim2 2r:17040685-17040872 - dsi-mir-310 Known_mirbase GAAAATATCAAGAATTAGCATCG---AAAAAGAAAA-AAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTATATTTAC-----TTCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-T
dm3 chr2R:16471207-16471394 - dme-mir-310 Known_mirbase GAAAATATCAAGAATTAACATCG---AAAAGTGAAA-AAAAAGTGT----------TT---G------CGAA----AACATAAACATTTG-CAGGGCGGGTCGTGTGTCAGTGTATTTAT-----ATCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACA---TTTAAATCTGTGAAA--TCGTAAAATTATAAA----AATCCAGTTG------------------------CGC-T
droEre2 scaffold_4845:10616385-10616559 - der-mir-310a Known_mirbase GAAAATATCAAGGACTTACATCA---A------------AAAGT-C----------TT---G------CAAA----TACACAAATATTTG-CAGGACGGGTCGTGTGTCAATGTATTGAT-----CTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CAACT---TGAATATCTGTGAAA--TCATAAAATTATATA----A-TCAATTTG------------------------GAC-T
droYak3 2R:12724896-12725072 + dya-mir-310 Known_mirbase GAAAATATCAAGGACTTGCATCG---A------------AAAGTGC----------TT---G------CAAA----TACACAAACATTTG-CAGGACGGGTCGTGTGGCAGTGTATTGAT-----TTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CGACT---TGGATATCTGTGAAA--TCATAAAATTATATA----ATTCAATTTG------------------------GGC-T
droEug1 scf7180000409474:1490314-1490492 + GAAAAGATTAGGGATATTCTTTA---A------------AAAGTGA----------GT---G------CACG----TACACAAACATTTG-CAGGTGGGGTTGTGGGCAAATATATTTAT-----TTTTC------------AAGTTATATTGCACACTTCCCGGCCTTTAAATGTCCAGTGTTT-CGACCC--TAAACATCTGTGAAA--TCATAAAATTATATA----ATTTCATATT------------------------CGC-T
droBia1 scf7180000302291:2816528-2816721 + CTAAACATCAAGGGCATTCCTCA---A------------AAAGCGC----------CT---G------CAAA----TACACAAGCATTTG-CAGGCCGGGTCGCGTGCCAATGTATTGAC-----T-TCA-------------GGCTATATTGCACACCTCCCGGCCCATAAATGCAAGGTGTTT-CAACA---AAAACATCTGAG--G--TTGTGAAGTTA--------ACTCCATATTTGTTATATTATATATTGTACATTTTAT-T
droTak1 scf7180000415401:99578-99759 - GAAAATATCAAGGGTGTTCCTCA---A------------AAAGTTC----------CT---G------CAAATACACACACACACATTTG-CAGGCTGGGTTGTGTGTTAATATATTGAT-----T-TTA-------------AGCTATATTGCACACTTCCCGGCCTATAAATGCCAAGTGTTT-CGACC---AAAATATCTGTGAAA--TCGTGGAATTACATGTATTACTTAATTTT------------------------G---T
droEle1 scf7180000491201:735821-736008 - GAAATTATCATGGATATTCATCA---AGATA--TTT-TAAAAGCTT----------TT---G------CAAT---GTACACAAACATTTG-CAGGCGGGGTGGTGCGTCAATATATTTTG-----TTTTT-------------ATCTATATTGCACACTTCCCGGCCTATAAATGCACAGTGTTT-CGACT---TAAATATTTGTGAAA--ACATTAAATTATATA----ATTTTATTTG------------------------GACGT
droRho1 scf7180000780104:81913-82102 - GAAATTAACATGGATATTCTTCG---ATATT----T-GTAAAGTTC----------CT---G------GCAGT--ACACACAAACATTTG-TAGGCGGGGTGGTGCGTCAATATATATATGTCG-TTTTT-------------ACCTATATTGCACACTTCCCGGCCTCTAAATGC-CAGTGTTT-CGACA---TAAATATCTGTGCAA--GCATCAAATTACATA----ATTTAATTTG------------------------GTTAT
droFic1 scf7180000454039:1775878-1776060 - AGTAATGCACTGGCTATTCATCA---A------------TTAT-TT----------AT---G------CAAAT--GCACAAAAACATTTG-CAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTTCT-------------AACTATATTGCACACTTCCCGGCCTATAAATGCGTATTGTGCTCACCT---AAAATATCTGTGAAA--TCAAAAAAATAA-TT----ATGTAATTTA------------------------TTT-T
droKik1 scf7180000302471:941449-941581 - TATAATATTCAGACTGATCAACA---G------------AATTTGCGTTTTTGTTTTGGGTA-------AAA--TATTACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGT-GAT------TTTG-------------ATTCATATTGCACACATACCGGCCTGATAATGTC--------------------------------------------------------------------------------------------
droAna3 scaffold_13266:4133000-4133193 + dan-mir-310 Known_mirbase GATGATCTCCGGCGCT--CGTCATCTGTGA-----C-TAAAAGTGC----------GA----AAATAGCA-A----AACATAAACACTTG-CAGGACGGGGAGCGTGACAATATATATAT-----TTTAT--A---------AACATATATTGCACACCTCCCGGCCTATAAGTGTA-AATGTTC-CTACAGGTAAAACTTCTAAGGAAAAACTTCATTTTTGAGA----AGCTCAGAAT------------------------TTA-T
droBip1 scf7180000396427:2575716-2575900 + GATAATATCTGGCATT--CGTCATCTGTGAGTCTGT-GAAAAGTGC----------GC---GAAATATC-AA----AACATAAACACTTG-CAGGACGGGATGTGTGACAATATTTTAAT-----TATTA------------AACAAATATTGCACACCTCCTGGCCTTTAAATGTA-AATGTTT-CTACT------------GCCGAA--GGAAAAACTTCATTT----TCGTAGCTCG------------------------CAT-T
dp5 3:8679803-8679811 + dps-mir-311 Known_mirbase GAAAGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_4:2566808-2566910 + ACA-----------------CCA---A------------CATTTGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATATACATACATAGTTTA-------------AAAAATATTGCACACTTCTCAGACTACAAATGTGAACTGTCT-GGTCT---TCAA-----------------------------------------------------------------------
droGri2 scaffold_15245:17564461-17564548 + TA--------------------------------------------------------------------------------ACCATTTT-CAGGATGGAAGCTGTGACAATATGTAGGT-----T-TTAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATG----------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GAAAATATCAAGAATTAGCATCG---AAAAAGAAAAATAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTGTATTTAC-----TTCTT-------------AACTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................22112571.0012571121561034956
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................2112018.0020181803518624
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................211731.00731731000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................231446.004464212203
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................201194.001941197653
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................241154.001541260262
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20182.008281010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................23180.008074240
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................25177.007770070
............................................................................................AGGACGGGTCGTGTGTCAGTGTA..........................................................................................................................................................23171.007160524
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................20148.004846020
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................22143.004331075
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22124.002424000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................23121.002121000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................26115.001514010
....................................................................................................................................................TATTGCACACTTCCCGGCCTG....................................................................................................21115.001514010
............................................................................................AGGACGGGTCGTGTGTCAGTGT...........................................................................................................................................................22115.001512111
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23113.001313000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1918.0086020
.....................................................................................................................................................ATTGCACACTTCCCGGCCT.....................................................................................................1918.0088000
............................................................................................AGGACGGGTCGTGTGTCAGTG............................................................................................................................................................2117.0076001
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................2217.0076001
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................2317.0077000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................2716.0064020
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTT..................................................................................................2216.0066000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................1816.0066000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................2315.0054010
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................1915.0055000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA................................................................................................2414.0044000
.............................................................................................GGACGGGTCGTGTGTCAGTGTA..........................................................................................................................................................2214.0044000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTA...................................................................................................2114.0044000
.............................................................................................GGACGGGTCGTGTGTCAGTGT...........................................................................................................................................................2113.0033000
......................................................................................................................................................TTGCACACTTCCCGGCCTT....................................................................................................1913.0032010
............................................................................................AGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2013.0033000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTT....................................................................................................2213.0033000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................2113.0030030
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTG...................................................................................................2113.0033000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTC...................................................................................................2113.0033000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................1812.0022000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................2412.0021010
.......................................................................................................................................................TGCACACTTCCCGGCCTT....................................................................................................1811.0011000
............................................................................................AGGACGGGTCGTGTGTCAGTGTAAAA.......................................................................................................................................................2611.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTCTG................................................................................................2511.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTGGC................................................................................................2511.0011000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTC..................................................................................................2211.0011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................2111.0010010
............................................................................................AGGACGGGTCGTGTGTCAGTGTT..........................................................................................................................................................2311.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................2411.0011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................2311.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC.................................................................................................2411.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCC.....................................................................................................2011.0010010
....................................................................................................................................................TATTGCACACTTCCCGGCCTTAT..................................................................................................2311.0011000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................2011.0010010
droSim2
GAAAATATCAAGAATTAGCATCG---AAAAAGAAAA-AAAAAGTGC----------TT---G------CAAA----AACATAAACATTTG-CAGGACGGGTCGTGTGTCAGTATATTTAC-----TTCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACT---TTAATATCTGTGAAA--TCATAAAATTATATA----ACGCAAGTTG------------------------CGC-TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................22125506.0025506322336450721599026582736353336831506147911861606011
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................2115419.0054192333915815111440239694773134944196525000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................2512995.002995012524910192171144686527882000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................2312479.00247907302753791415514568754853754863000
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................2011872.0018721288480830237357206117184744111000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................2411708.0017080262313472928348847236484617000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1911693.00169307190142249891920137102000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................2611019.0010190046600104845002564001000
............................................................................................AGGACGGGTCGTGTGTCAGTG............................................................................................................................................................211606.006060000009415235210067237000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................181432.00432016026211104152796000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................211337.00337000258310529928310000
....................................................................................................................................................TATTGCACACTTCCCG.........................................................................................................161241.002410000001014235000000
............................................................................................AGGACGGGTCGTGTGTCAGTAT...........................................................................................................................................................221226.0022600277040000135701000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................221216.0021601323008108650101546000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................271210.002100012400292081550000000
............................................................................................AGGACGGGTCGTGTGTCAGT.............................................................................................................................................................201193.00193008315127468966415000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................231149.0014901226001171321129443000
............................................................................................AGGACGGGTCGTGTGTCAGTA............................................................................................................................................................211118.001180021502111052215000
............................................................................................AGGACGGGTCGTGTGTCAG..............................................................................................................................................................19162.00620001370271010004000
....................................................................................................................................................TATTGCACACTTCCCGG........................................................................................................17162.0062000000696635000000
............................................................................................AGGACGGGTCGTGTGTCAGTATA..........................................................................................................................................................23161.0061000461000050000000
............................................................................................AGGACGGGTCGTGTGTCA...............................................................................................................................................................18152.00520000230580212002000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................18146.0046000000000045100000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20144.0044000298100111102000
...................................................................................................................TTTAC-----TTCTT-------------AGCTA.........................................................................................................................15141.004100000015121130000000
....................................................................................................................................................TATTGCACACTTCCC..........................................................................................................15135.0035000000000035000000
............................................................................................AGGACGGGTCGTGTGTC................................................................................................................................................................17133.0033000000670020000000
.....................................................................................................................................................ATTGCACACTTCCCGGCC......................................................................................................18131.0031000030000001000000
............................................................................................AGGACGGGTCGTGTGT.................................................................................................................................................................16130.0030000000110028000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23124.0024000200000020119000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................23124.0024000212000100000000
............................................................................................AGGACGGGTCGTGTGTCAGTATAAA........................................................................................................................................................25124.0024000100000023000000
............................................................................................AGGACGGGTCGTGTGTCAGTAA...........................................................................................................................................................22123.0023000200000217101000
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................20121.0021000150002010003000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................23120.0020004110000022100000
............................................................................................AGGACGGGTCGTGTGTCAGTATAA.........................................................................................................................................................24120.0020000200000018000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCT.....................................................................................................19119.0019000313100001100000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................23118.001800010023620103000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22117.0017000113110010000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................24116.001600020001430303000
....................................................................................................................................................TATTGCACACTTCCCGGCCTC....................................................................................................21116.0016111100001011000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAAA.............................................................................................28116.001600060031500010000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................22114.001402210001123110000
........................................................................................................................................................GCACACTTCCCGGCCTT....................................................................................................17113.0013000000000211000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................21113.001300010010511202000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAA................................................................................................24113.0013000110000110000000
.................................................................................................GGGTCGTGTGTCAGTATA..........................................................................................................................................................18112.0012000000000012000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTG....................................................................................................21111.001100440010001100000
............................................................................................AGGACGGGTCGTGTGTCAGTGA...........................................................................................................................................................22111.001100000043210001000
....................................................................................................................................................TATTGCACACTTCCCGGCCC.....................................................................................................20111.001105500000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTG...................................................................................................22110.001000020000005021000
............................................................................................AGGACGGGTCGTGTG..................................................................................................................................................................15110.0010000000000010000000
............................................................................................AGGACGGGTCGTGTGTCAGTT............................................................................................................................................................2119.00900000000000009000
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................1919.00900032000003001000
..........................................................................................................................................................ACACTTCCCGGCCTTT...................................................................................................1618.00800000000008000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTT....................................................................................................2217.00700010000000006000
....................................................................................................................................................TATTGCACACTTCCCGGCCG.....................................................................................................2017.00701500000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT.................................................................................................2417.00700000000100006000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................2417.00700310000210000000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................2017.00700000000302011000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................2115.00500000000002003000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTT..................................................................................................2215.00500010000000004000
........................................................................................TG-CAGGACGGGTCGTGTGTCAG..............................................................................................................................................................2215.00500000002210000000
........................................................................................................................................................GCACACTTCCCGGCCT.....................................................................................................1615.00500000000005000000
.................................................................................................GGGTCGTGTGTCAGTAT...........................................................................................................................................................1715.00500000000005000000
....................................................................................................................................................TATTGCACACTTCCCGGCA......................................................................................................1915.00500000011110001000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAAAA...............................................................................................2514.00400040000000000000
........................................................................................TG-CAGGACGGGTCGTGTGTCA...............................................................................................................................................................2114.00400000020010001000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTTA..................................................................................................2414.00400000000000022000
........................................................................................................................................................GCACACTTCCCGGCC......................................................................................................1514.00400000000004000000
...............................................................................................ACGGGTCGTGTGTCAGTAT...........................................................................................................................................................1914.00400000000004000000
..................................................................................................GGTCGTGTGTCAGTATA..........................................................................................................................................................1714.00400000000004000000
........................................................................................TG-CAGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2314.00400000003100000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAG..............................................................................................................................................................2114.00400000012010000000
............................................................................................AGGACGGGTCGTGTGTCAGTATAAAA.......................................................................................................................................................2613.00300000000003000000
............................................................................................AGGACGGGTCGTGTGTCAGG.............................................................................................................................................................2013.00300200000001000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAGT.............................................................................................................................................................2213.00300000021000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAA.................................................................................................2213.00300000000200001000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................2313.00300000001110000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAACA...............................................................................................2613.00300000000210000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTTAA.................................................................................................2512.00200010000000001000
........................................................................................TG-CAGGACGGGTCGTGTGTCAGTG............................................................................................................................................................2412.00200000001000001000
.........................................................................................................................................................CACACTTCCCGGCCTTT...................................................................................................1712.00200000000011000000
...................................................................................................................TTTAC-----TTCTT-------------AGCTAA........................................................................................................................1632.00600000021120000000
.................................................................................................GGGTCGTGTGTCAGT.............................................................................................................................................................1512.00200000000002000000
.............................................................................................................................................................CTTCCCGGCCTTTAAA................................................................................................1612.00200000000011000000
................................................................................................CGGGTCGTGTGTCAGTAT...........................................................................................................................................................1812.00200000000002000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT...............................................................................................2612.00200200000000000000
..................................................................................................GGTCGTGTGTCAGTA............................................................................................................................................................1512.00200000000002000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTG...................................................................................................2112.00200020000000000000
dm3
GAAAATATCAAGAATTAACATCG---AAAAGTGAAA-AAAAAGTGT----------TT---G------CGAA----AACATAAACATTTG-CAGGGCGGGTCGTGTGTCAGTGTATTTAT-----ATCTT-------------AGCTATATTGCACACTTCCCGGCCTTTAAATGTCCAATGTTT-CAACA---TTTAAATCTGTGAAA--TCGTAAAATTATAAA----AATCCAGTTG------------------------CGC-TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGGCCTTT...................................................................................................221478114.0047811400006274482887718013240000000882248316580000024171030621610799465730903684287033659149265187864050479928400010769280000000000000000069533428713411361104891087215116445710748517152206357813744622175586214814346882210569020451402180103130142116101458164110704790789155747875862397464872311877448160671146300000000000132602000131924010500000032223444294306150010112937211120326432301410000020581304169300457013945040196471494351349285602618061823033400004743014301215211218904500118000000013201524100048611011253223971263596173000490200008925414253375933587546247301767105081625062004725400001164354150135103207
............................................................................................AGGGCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................23130376.0030376000002000000000000001014300000000000091711815318101421224115123742130000000000000000000000000000401430000000502200011000000307900000000000000000000001132400100040114761274773866962600000000000000000000000000000000192212180011063000000178300130000002713563759299381855306439000300002000000000006000010000000020013400080240335232355776448187346240011010000980090013055368329533398100365018591931100910031042400513232931392010100
....................................................................................................................................................TATTGCACACTTCCCGGCCTT....................................................................................................21120055.00200550000232627111012000000004161763300000000001325294031471039522552322344045423619000511000000000000000000000026812517113644502416011455673802791460046259619831082133500100000000041207100203263167053473531293310161202419200000000000011030023000000000000389479922300360263300000102100000000012619028918893316107912961122225513492724100200008506001009001803003000000003101270004912619504814343128005000000730010219562636410130073775700040020000003939414000020
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTA..................................................................................................23113263.001326300001643188033610000000292668000000000071517291219214712143511726101021110009530000000000000000000000441173142977521022223423776794101937191410410310972326012081488002000000010110000161610122528401261014331139960000000000012000015030002000000410616121160004822725100005180001000001711417457345755017461241110619950000200023040000080090000000000000000100001854714186913520000000008113001142715226022004850480000000000000331335000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAA.................................................................................................2417612.0076120010324331520172000000007528000000000010132251112083541508112572000401000000000000000000000045528317273661000211308235357415151661015798616601133228500000000000010000014020002930711342426157480000000000003010013000001000000349122350001809140000011250000000001310266440231157254123742199500000000100200000000500000000000000000000026731720605250000000006810001410814400100243034000000000000041831000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................2216059.0060590000000200010000000037110000000000054144232222105008610000000000000000000000000000110050000000304000000000001022000000000000000000000020013005362612211810061331100000000000000000000000000000000050442010601200000371301001000011015788811637917220000000010000000000000000000000000000440001536211497551157952041067000000000440100115697138002120327522021402322001207100000196113300000
....................................................................................................................................................TATTGCACACTTCCCGGCCT.....................................................................................................2015361.0053610000004330040000000026143020000000000132129159103822927112111914780003300000000000000000000000241729105400102102531213004682002850115152153010000000000004017200000835373616201161689341314600000000000100000110100000000001117261031010042011400000104000000000425614881851061140175159449155417000200000205000009004020000000000020065200406823594814746130005010000611000112229174510004327160002006000000121053000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTT..................................................................................................2315001.005001000002813000301000000202164000000000012414410313616720310000000000000000000000010000481925692001100019111200015060049162520151158000000000000100000010000094165051310124100000000000000100000000010000000292223000609000000000000000007161339870230848631868445576000001000010000000000301000000000001002000043224635004000000900000233800010016810000000000000000001000100
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAA................................................................................................2514329.004329000001133000000000000146000000000001251538193211303201200000000000000000000000000000747511315200011101021860032030002018376113070000000000000000000050000019963112190611300000000000001200000100000000000001161110000401000000719000000000300021420124912021612802526810000000010010000000030000000000000000000002252571535214000000000231000167516100000432854000000000000012326000000
............................................................................................AGGGCGGGTCGTGTGTCAGTG............................................................................................................................................................2114251.0042510000001000010000000012820000000000234112510074433650620311000000000000000000000000000010000000000000000000000000200100030000000000000000000021101543518712222932263163311600000000000000000000000000000000459220037243000002945112050001092201617231110345100000000032000000000000200000000000000500004219256239502898039000001000039103001754803422131200656225240000910131700020223241518100000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAA.........................................................................................................................................................2411730.00173000000000000000000000010000000000000001010000000100140000000000000000000000000000020003000001010100000000000000100000000000000000000000000000210038010012361000000000000000000000000000000000001300030400000201001000000891050201154000000000000000000000000000000000000000000542743922963311512600000000006000003122399000000535761000000300001002212000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTT...................................................................................................2111386.00138600000033000000000000010300000000000000021124011121232000100000000000000000000000010102250000000304000020000001020110500000000000000000001111201040201101001030000000000010010000000000000000102000000005000000000000000031001411221295612313522525500010000000000000000000000000000000002000021930110190000000005000000113000000530000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCC......................................................................................................1911177.001177000000000000000000002403100000000001330120210110210001000560000000000000000000000040013001000020430001000001000300020000000000000081290293000051201200132021222300000000000000000000000000000000913000030200000010000000000141231442693837465525320000000010000000010010000000000000000110001412034140000000005000021000100000110000000000000000211000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATT........................................................................................................................................................251983.00983000000000000000000002200000000000004100001000113000120000000000000000000000000000000030000000000000000000000000100200000000000000000010000000011655272007540000000000000010000000000000000000034000101102000120000000000131105131861080000000000000000000000000000000000000000002310823702918320131000000000400000041982000000153058000000300000000452000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAAA........................................................................................................................................................251949.0094900000000000000000000001000000000000520100104000000111000000000000000000000000000020000000000000000000000000000000010000000000000000000000000210036311112352000000000000000000000000000000000006000030130000015002100000080201020310100000000000000000000000000000000000000000011761978121005600000000008000004524120011000123647900000020000000116138100000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAA...............................................................................................261833.008330000001000000000000011300000000000002340022101000000000000000000000000000000000009000140000000101100010000003000310260000000000000000000000000253000303000000000000000010000000000000000000021010000012000004500000000000003342731245273371550000000000000000000000000000000000000000002601280100000000030000101050000005410000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTT...................................................................................................201691.0069100000000000000000000101200000000000000000000010000000000000000000000000000000010013111230000001409100000000052023800900000000000000000000000001000010000000000000000000000000000000000000000000000000120000001000000000000058519462576779120000000000000000000000000000000000000000000120102000000000000000000200000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGC.......................................................................................................181653.006530000000000000000000014011000000000001101100000002102100006300000000000000000000000000010000000001100000000001000000000000000000000042262910000071100014000000000000000000000000000000000000000032100001000000000000000000013605101790000000000000100000000000000000000000000000000121201230000000000000000020000000141000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTC...................................................................................................221498.0049800000112401030100000001230000000000001020011002006112500000000000000000000000000007443100111000015100010000043001200600000000000000000001000002002020213141200000000000000000000000000000000031100010100000001000000000400125371835243233710000000000010000000010000000000000000010001632112700000000020000010430000004023000000000000000120000000
............................................................................................AGGGCGGGTCGTGTGTCAGT.............................................................................................................................................................201489.0048900000000000000000000001000000000003500010000000011001000000000000000000000000000000301100001000010000000000000000000000000000000000000100000031000122202203000000000000000000100000000000000000200112000000010002300001712310100101100010000100000000000000000000000000002000083344383611740000000001000000610390200003714130002002200000002301000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTA...................................................................................................221483.0048300000011121004000000000022200000000000011240002020110222000000000000000000000000000012613290000010211200100100044101300400000000000000000000000001100001110001000000000000000000000000000000000412000000200000010000000000010115441530134525660000000000000000000020000000000000000000006710151200000000020000013010000002820000000000000000100000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTC..................................................................................................231330.00330000000100000000000000009000000000000001000111000400000000000000000000000000000000531315000010170100000000000201330050000000000000000000000000010001000001000000000000000000000000000000000000000001010000001000000000022002135242425431937000010000000000000000000000000000000000000120104030000000000000000211000000421000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAT.................................................................................................241314.00314000001010001000000000001400000000000000000000100021000000000000000000000000000000010314120000000800270000110000300720018000000000000000000000000004000000000003000000000000000000100000000000001701600002030000000200000000001007216612311932000020000000000003000000000000000000010000000102000000000000000000011000000010000000000000000100000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAAAA.......................................................................................................................................................261254.00254000000000000000000000100000000000001200100010010000200000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000331400051200000000000000000000000000000000000000000070000050010000000122011002002000000000000000000000000000000000000000000212163193900000000000000001621000000666160000001000000062183000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAA..............................................................................................271247.0024700000000000000000000000000000000000000010000000000000000000000000000000000000000004005000000000000000000000000000000000000000000000000300000110000000000000000000000000000000000000000000002000000000000001100000000000007818514100851000000000000000000001000000000000000000000030102010000000000000000002000000106000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAG..............................................................................................................................................................191210.0021000000000000000000000010000000000001300010010010000101000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010000222010130000000000000000000000000000000000100000000000001000000100009133000001001000000000000000000000000000000000010000000312411283250000000001000000432001000019810001200700000001101000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTC..........................................................................................................................................................231172.001720000000000000000000000000000000000001100011000100310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000011221000000000000000000000000000000000001000000000000200000000000000000000000000000000000000000000000000000000000000004302953232500000000010000022311011000012000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTG..................................................................................................231145.0014500000000000200000000000100000000000000001010000000011000000000000000000000000000000000100000002010001000001000010104000000000000000000000000000010000001000000000000000000000000000000000002130000200000000000000000001400720792201116000000000000000000000000000000000000000000110211000000000002000000000000000101000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTT.................................................................................................241139.001390000000100000000000000040000000000100000000001000000000000000000000000000000000001000210000001003000003000020010000000000000000000000000000000000100000000000000000000000000000000000000004050000000000000000000000000100726495211118000000000000000001000000000000000000000000000000000000000000000000012100000010000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTATC................................................................................................251116.0011600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000110000000008924000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCA...............................................................................................................................................................18199.00990000000000000000000000100000000000000000000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010101000000000000000000000100000000000001010000000000000000000000004420000000000000000000000000000000000000000000000000000516153210000000001000001227200000736000100300000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTG...................................................................................................22193.00930000008221020000000000030000000000100001000000000100400000000000000000000000000006100400200000010000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100030924118000000000000000000000000000000000000000000220010100000000000000000001000000600000000000000000000000000
...................................................................................................................................................ATATTGCACACTTCCCGGCCTTT...................................................................................................23184.00840000001001010000000000080000000000000002020000000200000000000000000000000000000005121130000000111000000001015000000300000000000000000002000002000000000000000000000000000000000000000000000000000000000000000000000000000014213349000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAT.........................................................................................................................................................24184.008400000000000000000000010000000000000010000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000001100000000042000101011100000000000000000000000000000000000000000033074111140000000000000001316000000143000000100000000101000000
.................................................................................................GGGTCGTGTGTCAGTGTA..........................................................................................................................................................18184.00840000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000002242130175170000000000000000100000000010000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGA...........................................................................................................................................................22181.00810000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000600000000002000000001010000000000000000000000000000000000000000001100817340000000001000000229000100827000000200000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAC.................................................................................................24178.007800000000000100000000000100000000000000000110100021000000000000000000000000000000000035000000010010000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934413410000020000000000000000000000000000000000000200000000000000000000003010000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGC...........................................................................................................................................................22170.007000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000001328116190000000000000000126000000113000000000000000001000000
....................................................................................................................................................TATTGCACACTTCCCGGCCA.....................................................................................................20165.0065000000000000000000001102000000000000000001001000000000000000000000000000000000000303050000000000100000000000000000000000000000000000000000001300001001101000000000000000000000000000000000210100030000000000000000000010017101213000000000000000000000000000000000000000000112104110000000002000000000000000101000000000000000000000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTA..................................................................................................22161.00610000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000010000000000020000000000000000000000000000000010000001000000000000000000000000000000000000000000000001000000000000000000000443281167000000000000000000000000000000000000000000020001010000000001000000001000000002000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTT..........................................................................................................................................................23157.0057000000000000100000000000000000000000000000101000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000101100010000000000000000000000000000000000000000000000000000000030000000000000000000000000004000000000000000000000000000000122204020000000000000000038010000733000000300000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAAAA.............................................................................................28154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252124212000000000000000000000000000000000000000000000010010000000000000000000000100200000000000000000000000000
.............................................................................................GGGCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................22151.00510000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000100000010000000000000000000000000000000000000000000000500030800000000000000001514000000044000100000000000100000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTT....................................................................................................20147.00470000000000000000000000000000000000000000000001000000000000000000000000000000000000000200000000000000000000000000000000000000000000001000000020000000001000000000000000000000000000000000000000000000000000000000000000001412213535000000000000000000000000000000000000000000011000010000000000000000000000000010000000000000000000000000
.............................................................................................GGGCGGGTCGTGTGTCAGTG............................................................................................................................................................20142.0042000000000000000000000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000030010000000000000000000000000000000000000000000000000000000000000000420000000000000000000000000000000000000000000000000000010000000000000000000000139000000225000000400000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAG.................................................................................................24141.0041000000020000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000004000000000000000100000000000000000001000020000000001000000000000035131214000000000000000000000000000000000000000000000001000000000003000000000000000002000000000000000001000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATTA.......................................................................................................................................................26139.0039000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000040003040000000002000000033000000428000000000000000020000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTA....................................................................................................21139.00390000001000010000000001015000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000001010010000000000000000000000000000000000000001100010000000000000000000000022000301000000000000000000000000000000000000000000100100110000000000000000100000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTGT.................................................................................................24137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904000020100000000000000000100005020421000000000000000000000000000000000000000000001101000000000000000000000001000001000000000000010000000000
...............................................................................................GCGGGTCGTGTGTCAGTGTA..........................................................................................................................................................20135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000811261100000000000000000000000000011000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTG..........................................................................................................................................................23134.0034000000000000000000000000000000000000000000200000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000370305030000000000000000001000000122000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTA..................................................................................................21134.0034000000000000000000000002000000000000000000000000000000000000000000000000000000000001050000000001000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033211533000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TG-CAGGGCGGGTCGTGTGTCA...............................................................................................................................................................21133.0033000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010100000000000000000000000000000000000000000000000000020304030000000001100000001000000042000100110000000041000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAA.................................................................................................22131.0031000000000000000000000000000000000000001000000000001000000000000000000000000000000130010000000200000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100011012425000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000
......................................................................................................................................................TTGCACACTTCCCGGCCTTTAAA................................................................................................23131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000000510000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032123552000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTTTT................................................................................................25131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151026610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GCACACTTCCCGGCCTTT...................................................................................................18130.0030000000000000000000001300000000000000011000000000000100000000000000000000000000000100400000000000000000000001000000000000000000000000000000000000020000002000000000000000000000000000000000000000000000000000000000000200100111000000000000000000000000000000000000000000000001101020000000000000000000000000020000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAT................................................................................................25130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000100000000000300000000000000000000000000000000000000000000000000000000000000000000000201000000100000000000000000000010114534000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTC....................................................................................................21127.0027000000000003000000000000000000000000100000000000100000000000000000000000000000000000100000000000000000000200000000200000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000110023120101000000000000000000000000000000000000000000000000100000000001000000110000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTATA........................................................................................................................................................25126.0026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010007000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012040000000001000000001000000222000000000001000010000000
.............................................................................................GGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................21125.0025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000010000020002020000000000000000004000000163000000100000000010000000
.....................................................................................................................................................ATTGCACACTTCCCGGCCTTTAA.................................................................................................23124.0024000000000000000000000001000000000000000000000000000000000000000000000000000000000000050000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000002001633000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAGGGCGGGTCGTGTGTCAGTG............................................................................................................................................................22122.0022000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010101040000000002000000001000000103000000100000000020000000
......................................................................................................................................................TTGCACACTTCCCGGCCTT....................................................................................................19121.0021000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005110342000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAG................................................................................................25121.0021000000000000000000000000000000000000000000000000010000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022101214000000000000000001000000000000000000000000000003000000000001000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTC................................................................................................................................................................17121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001130500110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTT............................................................................................................................................................21121.0021000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000021000000000000000000000000000000000000000000000000000000000000000000200000100001000000000000000001000000000000000000000000000200010000000000000001042000000010000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAAT...............................................................................................26120.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000003002704000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCCTTTAAC................................................................................................25120.0020000000000000000000000000000000000010000001000000100000000000000000000000000000000000000000000200000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000317000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TATTGCACACTTCCCGGCT......................................................................................................19119.0019000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000010000000000000000000000003500000000000000000000000000000000000000000000000000000202000010000000000000000000000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGTAC.........................................................................................................................................................24118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000050002010000000000000000000000000122000000100000000000000000
.......................................................................................................................................................TGCACACTTCCCGGCCTTT...................................................................................................19118.0018000000000000000000000000000000000000000001000000100000000000000000000000000000000000030000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130111000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
............................................................................................AGGGCGGGTCGTGTGTCAGTGG...........................................................................................................................................................22118.0018000000000000000000000000000000000000000000100000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010315010000000000000000020000000000000000100000000000000000
.........................................................................................G-CAGGGCGGGTCGTGTGTCAG..............................................................................................................................................................21117.0017000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000040400010000000000000000000000000023000000000000000000000000
...........................................................................................CAGGGCGGGTCGTGTGTCAGTGT...........................................................................................................................................................23117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000110114050000000000000000000000000011000000000000000000000000
droEre2
GAAAATATCAAGGACTTACATCA---A------------AAAGT-C----------TT---G------CAAA----TACACAAATATTTG-CAGGACGGGTCGTGTGTCAATGTATTGAT-----CTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CAACT---TGAATATCTGTGAAA--TCATAAAATTATATA----A-TCAATTTG------------------------GAC-TSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGCCCTTT...................................................................................................22113097.0013097108042134113116110
....................................................................................................................................................TATTGCACACTTCCCGCCCTT....................................................................................................2111101.001101945117025950
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTT...................................................................................................211901.009018732701000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA.................................................................................................241334.003343102202000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTA..................................................................................................231325.003252793808000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA................................................................................................251197.00197195200000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTC...................................................................................................221150.00150514500000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTT..................................................................................................23172.007260821010
....................................................................................................................................................TATTGCACACTTCCCGCCCT.....................................................................................................20170.0070531300130
.....................................................................................................................................................ATTGCACACTTCCCGCCCTT....................................................................................................20169.006969000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTT...................................................................................................20168.006863500000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA...............................................................................................26153.005352000001
............................................................................................AGGACGGGTCGTGTGTCAATGTA..........................................................................................................................................................23150.005040000505
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTG..................................................................................................23126.002626000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................27126.002626000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTA..................................................................................................22125.002525000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA.................................................................................................23125.002525000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTA...................................................................................................22123.002320300000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA................................................................................................24122.002222000000
............................................................................................AGGACGGGTCGTGTGTCAATGT...........................................................................................................................................................22117.001711110310
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTT...................................................................................................23116.001615100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTC..................................................................................................23113.001310102000
............................................................................................AGGACGGGTCGTGTGTCAATG............................................................................................................................................................21111.001110000100
.......................................................................................................................................................TGCACACTTCCCGCCCTTT...................................................................................................1919.0098100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2818.0088000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTT..................................................................................................2217.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTG....................................................................................................2117.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTA....................................................................................................2117.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCC......................................................................................................1917.0074300000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA...............................................................................................2517.0077000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG.................................................................................................2415.0055000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTC....................................................................................................2115.0050500000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTA...................................................................................................2114.0044000000
.............................................................................................GGACGGGTCGTGTGTCAATGTA..........................................................................................................................................................2214.0044000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTG...................................................................................................2214.0044000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTC...................................................................................................2114.0040400000
............................................................................................AGGACGGGTCGTGTGTCAATGTATTGAT-----................................................................................................................................................2814.0040000004
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTG...................................................................................................2114.0044000000
....................................................................................................................................................TATTGCACACTTCCCGCC.......................................................................................................1814.0044000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCT.....................................................................................................1913.0033000000
.............................................................................................GGACGGGTCGTGTGTCAATGT...........................................................................................................................................................2113.0033000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTG..................................................................................................2213.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG.................................................................................................2413.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAC................................................................................................2513.0033000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAA.................................................................................................2213.0033000000
......................................................................................................................................................TTGCACACTTCCCGCCCTT....................................................................................................1913.0033000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT.................................................................................................2413.0032100000
.............................................................................................GGACGGGTCGTGTGTCAATG............................................................................................................................................................2012.0022000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................2612.0022000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTGG.................................................................................................2312.0022000000
........................................................................................................................................................GCACACTTCCCGCCCTTT...................................................................................................1812.0022000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTA..................................................................................................2412.0022000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC.................................................................................................2412.0022000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTAAA................................................................................................2611.0011000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTGGC................................................................................................2411.0011000000
............................................................................................AGGACGGGTCGTGTGTCAATTA...........................................................................................................................................................2211.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAT..............................................................................................2711.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAC..............................................................................................2711.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTC.................................................................................................2411.0011000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2711.0011000000
............................................................................................AGGACGGGTCGTGTGTCAATGA...........................................................................................................................................................2211.0010001000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTGG..................................................................................................2311.0011000000
....................................................................................................................................................TATTGCACACTTCCCGCCCAC....................................................................................................2111.0010100000
........................................................................................................................................................GCACACTTCCCGCCCTTTAAAA...............................................................................................2211.0011000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTTAA.................................................................................................2111.0011000000
.........................................................................................G-CAGGACGGGTCGTGTGTCAATGT...........................................................................................................................................................2411.0011000000
droYak3
GAAAATATCAAGGACTTGCATCG---A------------AAAGTGC----------TT---G------CAAA----TACACAAACATTTG-CAGGACGGGTCGTGTGGCAGTGTATTGAT-----TTCTT-------------AGCTATATTGCACACTTCCCGCCCTTTAAATGTCCAGTGTTT-CGACT---TGGATATCTGTGAAA--TCATAAAATTATATA----ATTCAATTTG------------------------GGC-TSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................TATTGCACACTTCCCGCCCTTT...................................................................................................22130388.0030388019757101714463920000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTT...................................................................................................2112170.0021700201915100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTT....................................................................................................2111594.0015940907611740020000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTC...................................................................................................2211155.00115506114900000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTA..................................................................................................231522.005220387125100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAA.................................................................................................241337.0033702626870000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTT..................................................................................................231256.0025611807050000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTT...................................................................................................201174.0017401344000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAA................................................................................................251155.0015501441010000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTC....................................................................................................211107.001070010700000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTT....................................................................................................201106.001060931300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCT.....................................................................................................20199.00990524520000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTA..........................................................................................................................................................23186.0086084200000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTG...................................................................................................22152.0052052000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTT...................................................................................................23149.0049047200000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTA...................................................................................................22145.00450311310000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTG..................................................................................................23141.0041038300000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTT...................................................................................................19140.00400291100000000
........................................................................................................................................................GCACACTTCCCGCCCTTT...................................................................................................18137.0037030700000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTA..................................................................................................22134.0034033100000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAA.................................................................................................23131.0031028300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAT.................................................................................................24126.0026024110000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAA...............................................................................................26126.0026025000100000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTT..................................................................................................22125.0025022300000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTC..................................................................................................23124.00240141000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGT...........................................................................................................................................................22120.0020014500010000
....................................................................................................................................................TATTGCACACTTCCCGCCC......................................................................................................19119.0019010810000000
............................................................................................AGGACGGGTCGTGTGGCAGTG............................................................................................................................................................21115.001509310020000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAA..............................................................................................27115.0015015000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCC.....................................................................................................20112.0012101100000000
.............................................................................................GGACGGGTCGTGTGGCAGTGTA..........................................................................................................................................................22112.0012012000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAA................................................................................................24112.0012012000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTT.................................................................................................24110.001009100000000
......................................................................................................................................................TTGCACACTTCCCGCCCTT....................................................................................................19110.001009100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAAAAAA.............................................................................................2819.00908000100000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGG.................................................................................................2419.00909000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAC.................................................................................................2419.00907200000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTC...................................................................................................2119.00901800000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAT.................................................................................................2316.00606000000000
....................................................................................................................................................TATTGCACACTTCCCGCC.......................................................................................................1816.00604200000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTG..................................................................................................2215.00505000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAAA........................................................................................................................................................2515.00502000000003
............................................................................................AGGACGGGTCGTGTGGCAGTGC...........................................................................................................................................................2215.00500500000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTC...................................................................................................2015.00500500000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAA.................................................................................................2214.00404000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTA..................................................................................................2114.00403100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTAG.................................................................................................2414.00404000000000
.............................................................................................GGACGGGTCGTGTGGCAGTGT...........................................................................................................................................................2114.00404000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTGT.................................................................................................2414.00404000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTAAAA...............................................................................................2513.00303000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTT..................................................................................................2113.00302100000000
.......................................................................................................................................................TGCACACTTCCCGCCCTT....................................................................................................1813.00302100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTG.................................................................................................2413.00303000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTT....................................................................................................2213.00303000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAA.........................................................................................................................................................2413.00303000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTCT.................................................................................................2413.00303000000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCT.....................................................................................................1912.00201100000000
.....................................................................................................................................................ATTGCACACTTCCCGCCCTTTC..................................................................................................2212.00202000000000
......................................................................................................................................................TTGCACACTTCCCGCCCT.....................................................................................................1812.00202000000000
........................................................................................................................................................GCACACTTCCCGCCCTTTT..................................................................................................1912.00201100000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTG....................................................................................................2112.00201100000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTAAA................................................................................................2612.00202000000000
...................................................................................................................................................ATATTGCACACTTCCCGCCCTTTA..................................................................................................2412.00202000000000
......................................................................................................................................................TTGCACACTTCCCGCCCTTTAAA................................................................................................2312.00202000000000
.......................................................................................................................................................TGCACACTTCCCGCCCTTTA..................................................................................................2012.00202000000000
............................................................................................AGGACGGGTCGTGTGGCAGT.............................................................................................................................................................2012.00220000000000
....................................................................................................................................................TATTGCACACTTCCCGCCCTTTTC.................................................................................................2412.00202000000000
............................................................................................AGGACGGGTCGTGTGGCAGTGTAT.........................................................................................................................................................2412.00202000000000
droEug1
GAAAAGATTAGGGATATTCTTTA---A------------AAAGTGA----------GT---G------CACG----TACACAAACATTTG-CAGGTGGGGTTGTGGGCAAATATATTTAT-----TTTTC------------AAGTTATATTGCACACTTCCCGGCCTTTAAATGTCCAGTGTTT-CGACCC--TAAACATCTGTGAAA--TCATAAAATTATATA----ATTTCATATT------------------------CGC-TSizeHit CountTotal NormTotal
No Reads
droBia1
CTAAACATCAAGGGCATTCCTCA---A------------AAAGCGC----------CT---G------CAAA----TACACAAGCATTTG-CAGGCCGGGTCGCGTGCCAATGTATTGAC-----T-TCA-------------GGCTATATTGCACACCTCCCGGCCCATAAATGCAAGGTGTTT-CAACA---AAAACATCTGAG--G--TTGTGAAGTTA--------ACTCCATATTTGTTATATTATATATTGTACATTTTAT-TSizeHit CountTotal NormTotal
No Reads
droTak1
GAAAATATCAAGGGTGTTCCTCA---A------------AAAGTTC----------CT---G------CAAATACACACACACACATTTG-CAGGCTGGGTTGTGTGTTAATATATTGAT-----T-TTA-------------AGCTATATTGCACACTTCCCGGCCTATAAATGCCAAGTGTTT-CGACC---AAAATATCTGTGAAA--TCGTGGAATTACATGTATTACTTAATTTT------------------------G---TSizeHit CountTotal NormTotal
No Reads
droEle1
GAAATTATCATGGATATTCATCA---AGATA--TTT-TAAAAGCTT----------TT---G------CAAT---GTACACAAACATTTG-CAGGCGGGGTGGTGCGTCAATATATTTTG-----TTTTT-------------ATCTATATTGCACACTTCCCGGCCTATAAATGCACAGTGTTT-CGACT---TAAATATTTGTGAAA--ACATTAAATTATATA----ATTTTATTTG------------------------GACGTSizeHit CountTotal NormTotal
No Reads
droRho1
GAAATTAACATGGATATTCTTCG---ATATT----T-GTAAAGTTC----------CT---G------GCAGT--ACACACAAACATTTG-TAGGCGGGGTGGTGCGTCAATATATATATGTCG-TTTTT-------------ACCTATATTGCACACTTCCCGGCCTCTAAATGC-CAGTGTTT-CGACA---TAAATATCTGTGCAA--GCATCAAATTACATA----ATTTAATTTG------------------------GTTATSizeHit CountTotal NormTotal
No Reads
droFic1
AGTAATGCACTGGCTATTCATCA---A------------TTAT-TT----------AT---G------CAAAT--GCACAAAAACATTTG-CAGGCGGGGTTGTGCGTCAATATATATGTTTTTTTTTCT-------------AACTATATTGCACACTTCCCGGCCTATAAATGCGTATTGTGCTCACCT---AAAATATCTGTGAAA--TCAAAAAAATAA-TT----ATGTAATTTA------------------------TTT-TSizeHit CountTotal NormTotal
No Reads
droKik1
TATAATATTCAGACTGATCAACA---G------------AATTTGCGTTTTTGTTTTGGGTA-------AAA--TATTACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGT-GAT------TTTG-------------ATTCATATTGCACACATACCGGCCTGATAATGTC--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GATGATCTCCGGCGCT--CGTCATCTGTGA-----C-TAAAAGTGC----------GA----AAATAGCA-A----AACATAAACACTTG-CAGGACGGGGAGCGTGACAATATATATAT-----TTTAT--A---------AACATATATTGCACACCTCCCGGCCTATAAGTGTA-AATGTTC-CTACAGGTAAAACTTCTAAGGAAAAACTTCATTTTTGAGA----AGCTCAGAAT------------------------TTA-TSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................TATTGCACACCTCCCGGCCTAT...................................................................................................221128673.0012867319561228543853541
....................................................................................................................................................TATTGCACACCTCCCGGCCTAC...................................................................................................22126620.00266201266127000
....................................................................................................................................................TATTGCACACCTCCCGGCCTA....................................................................................................21115798.0015798320142951174324
....................................................................................................................................................TATTGCACACCTCCCGGCCTATA..................................................................................................23113540.001354029312930316010
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAA.................................................................................................2414483.0044831074229147000
....................................................................................................................................................TATTGCACACCTCCCGGCCT.....................................................................................................2013454.0034542582959228513
....................................................................................................................................................TATTGCACACCTCCCGGCCTATT..................................................................................................2311738.00173847166526000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAT...................................................................................................2111643.00164313814987000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAA................................................................................................2511287.001287137105298000
....................................................................................................................................................TATTGCACACCTCCCGGCCTAA...................................................................................................2211139.00113926106944000
............................................................................................AGGACGGGGAGCGTGACAATAT...........................................................................................................................................................221898.0089811473640071
....................................................................................................................................................TATTGCACACCTCCCGGCCC.....................................................................................................201837.0083708370000
....................................................................................................................................................TATTGCACACCTCCCGGCC......................................................................................................191593.00593145754000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAC...................................................................................................211345.0034503450000
............................................................................................AGGACGGGGAGCGTGACAATA............................................................................................................................................................211336.0033632275190100
............................................................................................AGGACGGGGAGCGTGACAAT.............................................................................................................................................................201278.002782922023060
......................................................................................................................................................TTGCACACCTCCCGGCCTAT...................................................................................................201273.00273142581000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATC..................................................................................................231232.0023202275000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTAT...................................................................................................231229.0022952195000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATA..................................................................................................221206.00206251801000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAAA...............................................................................................261185.001855111420000
............................................................................................AGGACGGGGAGCGTGACAATATA..........................................................................................................................................................231172.00172491182021
.....................................................................................................................................................ATTGCACACCTCCCGGCCTA....................................................................................................201145.00145241147000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATG..................................................................................................231130.0013031216000
............................................................................................AGGACGGGGAGCGTGACAATATAA.........................................................................................................................................................24184.008414680020
............................................................................................AGGACGGGGAGCGTGACAA..............................................................................................................................................................19180.008065516030
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAT.................................................................................................24177.00770761000
............................................................................................AGGACGGGGAGCGTGACAATAC...........................................................................................................................................................22161.00610610000
............................................................................................AGGACGGGGAGCGTGACA...............................................................................................................................................................18160.0060103911000
....................................................................................................................................................TATTGCACACCTCCCGGCCTT....................................................................................................21159.00597448000
......................................................................................................................................................TTGCACACCTCCCGGCCTAC...................................................................................................20159.00590590000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAC.................................................................................................24159.00590581000
............................................................................................AGGACGGGGAGCGTGACAATAA...........................................................................................................................................................22158.00586501010
...................................................................................................................................................ATATTGCACACCTCCCGGCCTAC...................................................................................................23158.00580580000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATAA.................................................................................................23154.00542520000
.......................................................................................................................................................TGCACACCTCCCGGCCTAT...................................................................................................19146.00460460000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAAAA..............................................................................................27143.004323164000
.....................................................................................................................................................ATTGCACACCTCCCGGCCT.....................................................................................................19142.004216260000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATT..................................................................................................22140.00402380000
....................................................................................................................................................TATTGCACACCTCCCGGCCTGC...................................................................................................22140.00400400000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTA....................................................................................................22135.00351331000
......................................................................................................................................................TTGCACACCTCCCGGCCTATA..................................................................................................21134.00340340000
....................................................................................................................................................TATTGCACACCTCCCGGCCTAG...................................................................................................22134.00347243000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATTT.................................................................................................24134.00342310100
....................................................................................................................................................TATTGCACACCTCCCGGC.......................................................................................................18131.00310247000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAG.................................................................................................24129.00292270000
....................................................................................................................................................TATTGCACACCTCCCGGCCA.....................................................................................................20128.00282224000
...................................................................................................................................................ATATTGCACACCTCCCGGCCT.....................................................................................................21127.00272250000
............................................................................................AGGACGGGGAGCGTGACAAC.............................................................................................................................................................20124.00241230000
........................................................................................................................................................GCACACCTCCCGGCCTAT...................................................................................................18124.00240222000
....................................................................................................................................................TATTGCACACCTCCCGGCCTC....................................................................................................21121.00210912000
............................................................................................AGGACGGGGAGCGTGACAAA.............................................................................................................................................................20121.00210192000
...................................................................................................................................................ATATTGCACACCTCCCGGCCTATA..................................................................................................24120.00201190000
....................................................................................................................................................TATTGCACACCTCCCGGCCTG....................................................................................................21119.00190190000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAT................................................................................................25117.00171151000
............................................................................................AGGACGGGGAGCGTGACAATT............................................................................................................................................................21116.00162121010
......................................................................................................................................................TTGCACACCTCCCGGCCTA....................................................................................................19115.00152121000
.............................................................................................GGACGGGGAGCGTGACAATAT...........................................................................................................................................................21114.00141400000
......................................................................................................................................................TTGCACACCTCCCGGCCTATAA.................................................................................................22114.00140140000
.....................................................................................................................................................ATTGCACACCTCCCGGCCTATAAA................................................................................................24113.00133100000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAG................................................................................................25113.00130130000
....................................................................................................................................................TATTGCACACCTCCCGGCCTATAAC................................................................................................25113.00131111000
droBip1
GATAATATCTGGCATT--CGTCATCTGTGAGTCTGT-GAAAAGTGC----------GC---GAAATATC-AA----AACATAAACACTTG-CAGGACGGGATGTGTGACAATATTTTAAT-----TATTA------------AACAAATATTGCACACCTCCTGGCCTTTAAATGTA-AATGTTT-CTACT------------GCCGAA--GGAAAAACTTCATTT----TCGTAGCTCG------------------------CAT-TSizeHit CountTotal NormTotal
No Reads
dp5
GAAAGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
No Reads
droPer2
ACA-----------------CCA---A------------CATTTGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATATACATACATAGTTTA-------------AAAAATATTGCACACTTCTCAGACTACAAATGTGAACTGTCT-GGTCT---TCAA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................................................TTGCACACTTCTCAGACTACA..................................................................................................211577.005775748931000
......................................................................................................................................................TTGCACACTTCTCAGACTACAA.................................................................................................221502.00502144799000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................201208.00208028110178
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................211148.00148849100081
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................231133.0013303901093
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................231122.00122280162022
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................221104.0010411962076
......................................................................................................................................................TTGCACACTTCTCAGACTACAAA................................................................................................23169.00691653000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CA...............................................................................................................................................................20163.00630810054
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................23147.004701770023
...........................................................................................TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................22144.00440305009
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................21136.003611910015
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-C................................................................................................................................................................19134.00340400030
......................................................................................................................................................TTGCACACTTCTCAGACTAC...................................................................................................20131.00313253000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTC............................................................................................................................................................22129.00290000029
.......................................................................................................................................................TGCACACTTCTCAGACTACA..................................................................................................20128.00280280000
.......................................................................................................................................................TGCACACTTCTCAGACTACAA.................................................................................................21127.00270270000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................22125.00250910015
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-T................................................................................................................................................................19223.50470000047
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTT............................................................................................................................................................22121.00213010017
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAA...............................................................................................24121.00210201000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CA...............................................................................................................................................................19115.00150002013
....................................................................................................................................................TATTGCACACTTCTCAGACTAC...................................................................................................22115.00152103000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................22114.0014152006
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAAA..............................................................................................25112.00120111000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TT...............................................................................................................................................................20311.67350000035
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................23111.0011051005
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................24110.0010210007
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CC...............................................................................................................................................................2019.009000009
...........................................................................................TCGTCTAAGTTCTGTG-CAGTA............................................................................................................................................................2118.008030005
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTC............................................................................................................................................................2317.007000007
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAA..............................................................................................................................................................2017.007000007
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TC...............................................................................................................................................................2026.50130100012
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAA..............................................................................................................................................................2116.006021003
...........................................................................................TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................2016.006030003
....................................................................................................................................................TATTGCACACTTCTCAGACTACA..................................................................................................2315.005041000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CT...............................................................................................................................................................2015.005000005
........................................................................................................................................................GCACACTTCTCAGACTACAA.................................................................................................2015.005050000
............................................................................................CGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2115.005030002
...........................................................................................TCGTCTAAGTTCTGTG-CAG..............................................................................................................................................................1915.005050000
.....................................................................................................................................................ATTGCACACTTCTCAGACTACA..................................................................................................2214.004040000
......................................................................................................................................................TTGCACACTTCTCAGACTACAAAAAA.............................................................................................2614.004040000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-A................................................................................................................................................................1914.004000004
...........................................................................................TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................2214.004000004
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2414.004040000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAA................................................................................................2213.003030000
.....................................................................................................................................................ATTGCACACTTCTCAGACTAC...................................................................................................2113.003021000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATCC.........................................................................................................................................................2513.003000003
......................................................................................................................................................TTGCACACTTCTCAGACTACG..................................................................................................2113.003300000
....................................................................................................................................................TATTGCACACTTCTCAGACTA....................................................................................................2113.003111000
......................................................................................................................................................TTGCACACTTCTCAGACTA....................................................................................................1913.003030000
......................................................................................................................................................TTGCACACTTCTCAGACTACAG.................................................................................................2213.003210000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATC..........................................................................................................................................................2413.003000003
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATCCC........................................................................................................................................................2613.003000003
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGT.............................................................................................................................................................2313.003300000
............................................................................................CGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2313.003030000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-.................................................................................................................................................................1813.003000003
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2413.003011001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CCT..............................................................................................................................................................2112.002000002
....................................................................................................................................................TATTGCACACTTCTCAGACTACAA.................................................................................................2412.002020000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTCC...........................................................................................................................................................2312.002000002
............................................................................................CGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2212.002010001
......................................................................................................................................................TTGCACACTTCTCAGACT.....................................................................................................1812.002200000
........................................................................................................................................................GCACACTTCTCAGACTACA..................................................................................................1912.002020000
.......................................................................................................................................................TGCACACTTCTCAGACTAC...................................................................................................1912.002020000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAT..............................................................................................................................................................2112.002000002
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CTT..............................................................................................................................................................2112.002000002
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAA...........................................................................................................................................................2412.002110000
......................................................................................................................................................TTGCACACTTCTCAGACTACAC.................................................................................................2212.002110000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATAA.........................................................................................................................................................2512.002020000
....................................................................................................................................................TATTGCACACTTCTCAGACTACAAAA...............................................................................................2612.002020000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAA...............................................................................................2312.002020000
......................................................................................................................................................TTGCACACTTCTCAGACTACAAG................................................................................................2311.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2411.001010000
...............................................................................................CTAAGTTCTGTG-CAGTAA...........................................................................................................................................................1811.001010000
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAAAA.............................................................................................2511.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTA-A................................................................................................................................................................1911.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGG.............................................................................................................................................................2111.001100000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTCC...........................................................................................................................................................2511.001000001
.......................................................................................................................................................TGCACACTTCTCAGACTACAAAAA..............................................................................................2411.001010000
....................................................................................................................................................TATTGCACACTTCTCAGACT.....................................................................................................2011.001100000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGC.............................................................................................................................................................2111.001100000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTT............................................................................................................................................................2311.001000001
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-C................................................................................................................................................................2011.001000001
.................................................................................................................TATACATACATAGTTTA-------------AAAAAT........................................................................................................................2311.001010000
.............................................................................................GTCTAAGTTCTGTG-CAGTA............................................................................................................................................................1911.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTT-.................................................................................................................................................................1811.001000001
.....................................................................................................................................................ATTGCACACTTCTCAGACTACAAAA...............................................................................................2511.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATTC.........................................................................................................................................................2511.001010000
.............................................................................................GTCTAAGTTCTGTG-CAGTAT...........................................................................................................................................................2011.001010000
...........................................TGT---------------------------------------------TCGTCTAAGTTCTGTG-CAGA.............................................................................................................................................................2311.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAC..............................................................................................................................................................2011.001000001
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATTA.........................................................................................................................................................2411.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATG..........................................................................................................................................................2411.001010000
...........................................................................................TCGTCTAAGTTCTGTG-CAGTATCCC........................................................................................................................................................2511.001000001
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATT..........................................................................................................................................................2411.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAAA.............................................................................................................................................................2211.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-CAGTG............................................................................................................................................................2211.001010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CG...............................................................................................................................................................2011.001000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-CAGTATA..........................................................................................................................................................2511.001010000
.....................................................................................................................................................ATTGCACACTTCTCAGACTACAA.................................................................................................2311.001010000
....................................................................................................................................................TATTGCACACTTCTCAGACTACAAA................................................................................................2511.001010000
.............................................T---------------------------------------------TCGTCTAAGTTCTGTG-TT...............................................................................................................................................................1940.502000002
......................................................................................................................................................TTGCACACTTCTCAGACG.....................................................................................................1820.501100000
............................................................................................................................................................ACTTCTCAGACTACAAAA...............................................................................................1820.501010000
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TCC..............................................................................................................................................................2130.331000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTG-TTC..............................................................................................................................................................2150.201000001
............................................GT---------------------------------------------TCGTCTAAGTTCTGTT-T................................................................................................................................................................1960.171000001
droGri2
TA--------------------------------------------------------------------------------ACCATTTT-CAGGATGGAAGCTGTGACAATATGTAGGT-----T-TTAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATG----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................TATTGCACACCTCCCGGCCTAT...................................................................................................22120.0020200
....................................................................................................................................................TATTGCACACCTCCCGGCCT.....................................................................................................2019.00990
....................................................................................................................................................TATTGCACACCTCCCGGCCTA....................................................................................................2115.00550
............................................................................................AGGATGGAAGCTGTGACAATAT...........................................................................................................................................................2215.00505
............................................................................................AGGATGGAAGCTGTGACAATATG..........................................................................................................................................................2314.00404
....................................................................................................................................................TATTGCACACCTCCCGGCCTT....................................................................................................2113.00330
............................................................................................AGGATGGAAGCTGTGACAAT.............................................................................................................................................................2013.00312
............................................................................................AGGATGGAAGCTGTGACAA..............................................................................................................................................................1912.00211
............................................................................................AGGATGGAAGCTGTGACAATA............................................................................................................................................................2112.00202
.....................................................................................................................................................ATTGCACACCTCCCGGCCT.....................................................................................................1912.00220
.....................................................................................................................................................ATTGCACACCTCCCGGCCTAT...................................................................................................2111.00110
....................................................................................................................................................TATTGCACACCTCCCGGCC......................................................................................................1911.00110
............................................................................................AGGATGGAAGCTGTGACAATATGT.........................................................................................................................................................2411.00101
.....................................................................................................................................................ATTGCACACCTCCCGGCCTA....................................................................................................2011.00110
............................................................................................AGGATGGAAGCTGTGACA...............................................................................................................................................................1811.00101

Generated: 10/20/2015 at 07:33 PM